g.barbadense_cottongen_reftransV1_0094227, g.barbadense_cottongen_reftransV1_0094227 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.662e-66 Identity = 117/174 (67.24%), Postives = 137/174 (78.74%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVA-LGHSLIAS-ASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLT--TNEASQQA-IKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFYLKTGSCKYG+TCRYNHP+R AFIP A + +SL++S +NLN+G+V PA+S YQT+ T PTL YPQRPGQ+ECDYYMKTGECKFG+RCKFHHP DRL+ T +A QQ +KL+LAG PRREG+++CPYYMKTGTCKYGATCKFDHPPPGE Sbjct: 343 EVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQTL-------------TQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGE 503 HSP 2 Score: 108.227 bits (269), Expect = 5.256e-23 Identity = 64/187 (34.22%), Postives = 82/187 (43.85%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPID--------------RLTTNEASQQAIKLTLA--------GLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DCP+Y+KT CKYGS C++NHP A + V TQ P+RP + C +YMKTG+CKFG CKFHHP D LT+ + +T GLP R G V CP+Y+KTG+CKYGATC+++HP Sbjct: 228 EPDCPYYIKTQRCKYGSKCKFNHPREEAAVS------------------------------------------------VETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366 HSP 3 Score: 92.8189 bits (229), Expect = 4.464e-18 Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC Y++T +CK+G +CR++HP ++P + P + ++ + YP+RPG+ +C YY+KT CK+G +CKF+HP + + +Q + LP R C +YMKTG CK+G +CKF HP Sbjct: 177 EKDCTHYMQTRTCKFGESCRFDHP---IWVPEGGI---------------------------PDWKEAPVVPNEE----------YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS-------LPERPSEPMCTFYMKTGKCKFGLSCKFHHP 294 HSP 4 Score: 81.6481 bits (200), Expect = 1.394e-14 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = -3 Query: 513 YQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEAS-QQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 836 Y T P+L T+ L P+YPQR G+ +C +YM+T CKFG+ C+F HPI ++A + P R G CPYY+KT CKYG+ CKF+HP Sbjct: 155 YFTKRPKLESTSHL------------PIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHP 251
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H8_ORYSJ (Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=Os01g0616400 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 8.632e-49 Identity = 92/175 (52.57%), Postives = 118/175 (67.43%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPV-YPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTN-----EASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFY+K GSCK+GSTCR+NHPDR P+ LG +++ + ++ ++N +++ Q D MP VG PV YPQRPG T CD+YMKTG CKF DRCKFHHPIDR + E ++++++LTLAGLPRRE +V C +YMKTG CK+G CKFDHPPP E Sbjct: 291 EVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESM---LLNSSANFMQGFD--------FHAAHMP--VGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQE 452 HSP 2 Score: 95.5153 bits (236), Expect = 3.470e-19 Identity = 72/238 (30.25%), Postives = 97/238 (40.76%), Query Frame = -3 Query: 513 QDEVDCPFYLKTGSCKYGSTCRYNHPDR--NAFIPPVALGHSLIASASNLNIGVVNPASSLY-----------------QTIDPRLSQTTLLAQQTMP--TLVGTQ----------PV----------YPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTN------------------------------EASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1013 + E DCPF++KTG CK+GS C++NHP NA LIA +S L + P S Y + I+ SQ + T+ T +G+ PV P RPG+ +C +YMK G CKFG C+F+HP DRL N A+ + P+R G+ C +YMKTG CK+ CKF HP Sbjct: 157 EGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHP-DRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHP 393 HSP 3 Score: 90.8929 bits (224), Expect = 1.380e-17 Identity = 48/168 (28.57%), Postives = 81/168 (48.21%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHP---IDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC FY+ T +CK+G +C+++HP ++P + P + +++ YP++ G+ +C ++MKTG+CKFG +CKF+HP ++ L + + + + + LP R C +Y KTG CK+ A CKF+HP Sbjct: 108 EKDCAFYMMTRTCKFGGSCKFDHPQ---WVPEGGI---------------------------PNWKEQAANVEES----------YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHP 235 HSP 4 Score: 90.5077 bits (223), Expect = 1.806e-17 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = -3 Query: 513 SLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHP--IDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 842 S + I+ S T+ + P L + P+YPQRPG+ +C +YM T CKFG CKF HP + +QA + P +EG CP++MKTG CK+G+ CKF+HP Sbjct: 75 STVEQIEALYSSNTMTKR---PRLESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVE-ESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 9.128e-27 Identity = 70/166 (42.17%), Postives = 85/166 (51.20%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHP-DRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC +YL+TG+C YG CRYNHP DR A+A+ LN G +TT A+ YP+RPGQ C+YYMK G CKFG CK+ HP E S QA+ L +G P R G C YY+KTG CK+G+TCKF HP Sbjct: 54 EADCVYYLRTGACGYGENCRYNHPRDR--------------AAAAVLNGG----------------GKTTHSAE------------YPERPGQPVCEYYMKNGTCKFGSNCKYDHP------REGSVQAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHP 171 HSP 2 Score: 93.5893 bits (231), Expect = 1.822e-18 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = -3 Query: 513 QPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 761 +P +P RPGQ EC YY+KTG CKFG CK+HHP L T +++ L+ GLP R GS C YY + G CK+G TCKFDHP Sbjct: 293 EPAFPARPGQPECQYYLKTGSCKFGSACKYHHP-QYLNTPKSN---CMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHP 371 HSP 3 Score: 85.1149 bits (209), Expect = 9.619e-16 Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = -3 Query: 513 PQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 749 P+RPG+ +C YY++TG C +G+ C+++HP DR + A P R G C YYMK GTCK+G+ CK+DHP Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHP 127
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.884e-26 Identity = 70/187 (37.43%), Postives = 96/187 (51.34%), Query Frame = -3 Query: 513 DEVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTI----DPRLSQTTLLAQQTMPTLVGT-----------------QPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1010 +E DC ++L+ G CK+G TC++NHP + V++ S + SA G P+ S +T PRL + A + L + + V+P+RPGQ EC +YMKTG+CKFG CKFHHP DR T L+ GLP R G C +Y + G CK+G +CKFDHP Sbjct: 135 NEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTG--QPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQT----PPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315 HSP 2 Score: 100.523 bits (249), Expect = 4.244e-21 Identity = 53/165 (32.12%), Postives = 78/165 (47.27%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC +Y++TG C++GSTCR+NHP + IA+A + YP+R GQ EC++Y+KTG CKFG CKFHHP ++ + ++ + + P R C Y+++ G CK+G TCKF+HP Sbjct: 45 EPDCAYYIRTGLCRFGSTCRFNHPHDRKLV---------IATAR-------------------------------------IKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGID----GSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159 HSP 3 Score: 83.5741 bits (205), Expect = 1.387e-15 Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = -3 Query: 513 LSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 815 + Q L + TM G YP+R G+ +C YY++TG C+FG C+F+HP DR ++ IK P R G C +Y+KTGTCK+G TCKF HP Sbjct: 22 MWQMNLGSDDTM----GVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR--IK---GEYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.517e-24 Identity = 72/218 (33.03%), Postives = 99/218 (45.41%), Query Frame = -3 Query: 513 DEVDCPFYLKTGSCKYGSTCRYNHP-------------------DRNAFIPPVALGH-----SLIASASNLNIGVVNPASSLYQTIDP----------RLSQTTLLAQ--------------QTMPT----LVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1010 +EVDC ++L+TG CK+G TC++NHP R +FI SLI + + NP S ++ P L Q + ++P + + V+P+RPGQ EC +YMKTG+CKFG CKFHHP DR +A L+ GLP R G C +Y + G CK+G +CKFDHP Sbjct: 133 NEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR----QAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346 HSP 2 Score: 110.153 bits (274), Expect = 3.982e-24 Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = -3 Query: 507 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPP 1007 E DC +Y++TG C++GSTCR+NHP + IA+A + YP+R GQ EC+YY+KTG CKFG CKFHHP ++ + L + G P R V C Y+++TG CK+G TCKF+HP P Sbjct: 43 EPDCSYYIRTGLCRFGSTCRFNHPRDRELV---------IATAR-------------------------------------MRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNK----AGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQP 159 HSP 3 Score: 90.5077 bits (223), Expect = 8.256e-18 Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = -3 Query: 513 NLNIGVVNPASSLYQTID-PRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 875 + N GV P SSL ++ + Q L + +TM T YP+RPG+ +C YY++TG C+FG C+F+HP DR A P R G C YY+KTGTCK+G TCKF HP Sbjct: 2 DFNAGV--PMSSLSPLMNQDAMWQMNLSSDETMET-----GSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELV-----IATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHP 111
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H3_ARATH (Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis thaliana GN=At1g04990 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.861e-24 Identity = 60/167 (35.93%), Postives = 78/167 (46.71%), Query Frame = -3 Query: 507 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPP 1007 E DC FYL+TG C YGS+CRYNHP L Q ++ +P +R GQ +C+Y++KTG CK+G CK+HHP DR Q + + GLP R G CPYY++TGTC++G CKF HP P Sbjct: 50 ERDCQFYLRTGLCGYGSSCRYNHPTH--------------------------------------LPQDVAYYKEELP----------ERIGQPDCEYFLKTGACKYGPTCKYHHPKDR-----NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQP 163 HSP 2 Score: 78.9518 bits (193), Expect = 5.208e-14 Identity = 61/207 (29.47%), Postives = 83/207 (40.10%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSL-----------------YQTIDPRLSQTTLLAQQTMPTL--------VGTQPVYP-----------------QRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E CP+YL+TG+C++G C+++HP + GHS S+ + AS L Y I SQ L Q P + V QP Y + Q EC ++M TG CK+GD CK+ HP R++ S + LP R G C + G CK+G CKFDHP Sbjct: 138 EKPCPYYLRTGTCRFGVACKFHHPQPDN-------GHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSL----INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333 HSP 3 Score: 75.485 bits (184), Expect = 6.972e-13 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = -3 Query: 513 YPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 752 YP RPG+ +C +Y++TG C +G C+++HP Q + LP R G C Y++KTG CKYG TCK+ HP Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL-------PQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHP 116
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.273e-23 Identity = 75/237 (31.65%), Postives = 100/237 (42.19%), Query Frame = -3 Query: 513 DEVDCPFYLKTGSCKYGSTCRYNHPD-------------------------------------RNAFIP-----------PVALGHSLIASAS-NLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQP---------------------VYPQRPGQTECDYYMKTGECKFGDRCKFHHP-IDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1010 E +C +YLKTG CKYG+TC+++HP+ R +FIP P+ + L+ S N G + P SS + +Q T Q + G Q V+P+RP Q EC YYMKTG+CKFG CKFHHP + + T + L+ GLP R G C +Y + G CK+GA CKFDHP Sbjct: 173 SEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPD-----CVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404 HSP 2 Score: 106.686 bits (265), Expect = 7.219e-23 Identity = 63/166 (37.95%), Postives = 77/166 (46.39%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHP-DRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC +YL+TG C++G +CR+NHP DRN +A AS G YP+R GQ EC YY+KTG CKFG CKFHHP ++ ++L G P R C YY+KTG CKYG TCKF HP Sbjct: 83 EPDCTYYLRTGLCRFGMSCRFNHPQDRN------------LAIASARMKGE-----------------------------------YPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGI----AGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHP 197 HSP 3 Score: 85.1149 bits (209), Expect = 8.579e-16 Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = -3 Query: 513 LLAQQTMPTLVGTQP-VYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 800 + Q TM QP YP+R G+ +C YY++TG C+FG C+F+HP DR +++ + P R G C YY+KTGTCK+G TCKF HP Sbjct: 60 MWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE-----YPERMGQPECQYYLKTGTCKFGPTCKFHHP 151
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 4.783e-23 Identity = 63/166 (37.95%), Postives = 78/166 (46.99%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHP-DRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC +YL+TG+C +G CRYNHP DR + G N A+ +D YP+R GQ C+YYMKTG CKFG CK+HHP + + + L +G P R G C YYMKTG CK+G TCKF HP Sbjct: 62 EEDCVYYLRTGACGFGDRCRYNHPRDRGG---------------TEFGGGARNAAA-----LD-----------------------YPERAGQPICEYYMKTGTCKFGTNCKYHHP-----KQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHP 179 HSP 2 Score: 97.4413 bits (241), Expect = 9.096e-20 Identity = 67/229 (29.26%), Postives = 98/229 (42.79%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAF-----------IPPVALGHSLIASASNLNIGV--VNPASSLYQTIDPRLSQTTLLAQQTM--------PTLVG-------TQPVY------------------------------------PQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E +C +Y+KTG CK+G+TC+++HP+ P +A H AS +N +G V P S + + P + + ++ Q P + G PVY P+RPGQ +C YYM+TG+CKFG CK+HHP + A + + LP R G+ C YY + G C+YG CK+DHP Sbjct: 156 EKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPSIASPHPY-ASLANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPREL----SAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379 HSP 3 Score: 88.1965 bits (217), Expect = 8.683e-17 Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 513 PQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 749 P+RPG+ +C YY++TG C FGDRC+++HP DR T E A P R G C YYMKTGTCK+G CK+ HP Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGT-EFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHP 134
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.204e-23 Identity = 77/229 (33.62%), Postives = 104/229 (45.41%), Query Frame = -3 Query: 513 QDEVDCPFYLKTGSCKYGSTCRYNHPD--RNAFIPPVALGHSLIAS------------ASNLNI---------------------GVVN-PASSLYQT-IDPRLS--------QTTLLA----QQTMPTLVGTQP-------------VYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1013 + + +C +YLKTG CK+G TC+++HP PP A S +S+L + GVV P S Y + P LS T+L T P+L G P +P+RPG+ EC YY+KTG+CKFG CKFHHP DR+ + L+ GLP R G C +Y++ G CK+G+TCKFDHP Sbjct: 137 EGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRV----PPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361 HSP 2 Score: 104.76 bits (260), Expect = 4.113e-22 Identity = 59/165 (35.76%), Postives = 75/165 (45.45%), Query Frame = -3 Query: 507 DCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPP 1001 DC +Y++TG C YG+ CRYNHP A + + T+ A YP+R G+ C +Y+KTG CKFG CKFHHP + S + L + G P REG C YY+KTG CK+G TCKF HP P Sbjct: 50 DCAYYMRTGVCGYGNRCRYNHPRDRASV------------------------------------EATVRATGQ----------YPERFGEPPCQFYLKTGTCKFGASCKFHHPKN----AGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQP 164 HSP 3 Score: 90.5077 bits (223), Expect = 1.852e-17 Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = -3 Query: 513 QQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 791 Q++M L YP+RPG +C YYM+TG C +G+RC+++HP DR AS +A P R G C +Y+KTGTCK+GA+CKF HP Sbjct: 29 QESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR-----ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.294e-22 Identity = 59/168 (35.12%), Postives = 80/168 (47.62%), Query Frame = -3 Query: 507 EVDCPFYLKTGSCKYGSTCRYNHP-DRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPP 1007 E DC +Y++TG C++G TC++NHP DR + +A+ + + YPQR GQ EC YY+KTG CKFG CKFHHP ++ A ++L G P R C YY++TG CK+G+TCKF HP P Sbjct: 59 EPDCSYYMRTGLCRFGMTCKFNHPADRK-----------MAVAAARM------------------------------------KGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKA----AIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQP 175 HSP 2 Score: 92.0485 bits (227), Expect = 4.096e-18 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 513 TIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 830 TI P + + Q + + P YP+R G+ +C YYM+TG C+FG CKF+HP DR A++ + P+R G C YY+KTGTCK+GATCKF HP Sbjct: 28 TIGPHVVDEEAMWQMNLGEAMEAGP-YPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE-----YPQRIGQPECQYYLKTGTCKFGATCKFHHP 127 HSP 3 Score: 90.8929 bits (224), Expect = 1.031e-17 Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = -3 Query: 513 VGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRL--TTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 770 V + ++P+RP Q EC +YMKTG+CKFG CKFHHP +R+ T N A L+ GLP R G C +Y + G CK+G CKFDHP Sbjct: 300 VQRESIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCA------LSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHP 381
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Match: A0A068VET8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_446 OS=Coffea canephora GN=GSCOC_T00012318001 PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.075e-65 Identity = 117/176 (66.48%), Postives = 135/176 (76.70%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLI--ASASNLNIGVVNPASSLYQTIDPRLSQTTL-LAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDR----LTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFYLKTGSCKYG TCRYNHPDRNA PP A + + A NL+IG+VNPA+S+ QT DPRL+QTT+ LA +YPQRPG+ CD+YMKTGECKFG RCKFHHPIDR ++ E Q+ +KLT AGLPRREG++HCPYYMKTGTCKYGATC+FDHPPPGE Sbjct: 312 EVDCPFYLKTGSCKYGQTCRYNHPDRNAINPPAAAIGAAYIASPAPNLSIGIVNPAASILQTFDPRLTQTTVGLAAA----------IYPQRPGEAACDFYMKTGECKFGQRCKFHHPIDRSAPIISGKETQQENVKLTRAGLPRREGAIHCPYYMKTGTCKYGATCRFDHPPPGE 477 HSP 2 Score: 108.612 bits (270), Expect = 2.520e-21 Identity = 66/191 (34.55%), Postives = 88/191 (46.07%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPID----------------RLTTNEASQQ----------AIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DCPF++KT CK+G+ C++NHP I + P L+A +T V P+RP + C +YMKTG+CKFG CKFHHP D +L+TNE S A+ GLP R G V CP+Y+KTG+CKYG TC+++HP Sbjct: 190 EPDCPFFMKTQRCKFGTRCKFNHP-----------------------IEKITP----------------LVALET------NSAVLPERPSEPPCAFYMKTGQCKFGATCKFHHPKDLQISTAGQENSFGEQSKLSTNETSGDFKAVKPPVTPAMMHNTKGLPIRLGEVDCPFYLKTGSCKYGQTCRYNHP 335 HSP 3 Score: 103.605 bits (257), Expect = 1.030e-19 Identity = 58/165 (35.15%), Postives = 84/165 (50.91%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC +Y+ T +CKYG +C+++HP ++P + + + +P LV T P+RPG+ +C ++MKT CKFG RCKF+HPI+++T A++ A LP R C +YMKTG CK+GATCKF HP Sbjct: 138 EKDCAYYMLTRTCKYGDSCKFDHP---IWVP-----------------------------------EGGIPDWKEVP-LVDTSEPLPERPGEPDCPFFMKTQRCKFGTRCKFNHPIEKIT----PLVALETNSAVLPERPSEPPCAFYMKTGQCKFGATCKFHHP 259 HSP 4 Score: 90.8929 bits (224), Expect = 1.258e-15 Identity = 59/200 (29.50%), Postives = 89/200 (44.50%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTN-----------------------------------EASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E C FY+KTG CK+G+TC+++HP ++ I +S S L+ N S ++ + P ++ P ++ P R G+ +C +Y+KTG CK+G C+++HP DR N +Q + L A P+R G C +YMKTG CK+G CKF HP Sbjct: 236 EPPCAFYMKTGQCKFGATCKFHHP-KDLQISTAGQENSF-GEQSKLS---TNETSGDFKAVKPPVT----------PAMMHNTKGLPIRLGEVDCPFYLKTGSCKYGQTCRYNHP-DRNAINPPAAAIGAAYIASPAPNLSIGIVNPAASILQTFDPRLTQTTVGLAAAIYPQRPGEAACDFYMKTGECKFGQRCKFHHP 419 HSP 5 Score: 90.5077 bits (223), Expect = 1.624e-15 Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 513 TTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKL--TLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 806 T LA++ G P+YPQRPG+ +C YYM T CK+GD CKF HPI + + L T LP R G CP++MKT CK+G CKF+HP Sbjct: 114 TNPLAKRPRFESAGNLPIYPQRPGEKDCAYYMLTRTCKYGDSCKFDHPIWVPEGGIPDWKEVPLVDTSEPLPERPGEPDCPFFMKTQRCKFGTRCKFNHP 213
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Match: R0I1T4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013453mg PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.263e-65 Identity = 118/174 (67.82%), Postives = 139/174 (79.89%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIP-PVALGHSLIAS-ASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRL--TTNEASQQA-IKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFYLKTGSCKYG+TCRYNHP+R AFIP + +SL++S A+NLN+G+V PA+SLYQT+ + PTL G YPQRPGQ+ECDYYMKTGECKFG+RC+FHHP DRL TT +A QQ +KL+LAG PRREG+V+CPYYMKTGTCK+GATCKFDHPPPGE Sbjct: 344 EVDCPFYLKTGSCKYGATCRYNHPERTAFIPQATGINYSLLSSNAANLNLGMVTPATSLYQTL-------------SQPTLGGLSATYPQRPGQSECDYYMKTGECKFGERCRFHHPADRLSATTKQAPQQPNVKLSLAGYPRREGAVNCPYYMKTGTCKFGATCKFDHPPPGE 504 HSP 2 Score: 104.76 bits (260), Expect = 5.990e-20 Identity = 63/187 (33.69%), Postives = 81/187 (43.32%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPID--------------RLTTNEASQQAIKLTLA--------GLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DCP+Y+KT CKYGS C++NHP A V Q P+RP + C +YMKTG+CKFG CKFHHP D LT++ + +T GLP R G V CP+Y+KTG+CKYGATC+++HP Sbjct: 229 EPDCPYYIKTQRCKYGSRCKFNHPRAEA------------------------------------------------AATVENQDALPERPSEPMCTFYMKTGKCKFGLTCKFHHPKDIQIPSSSQDNGSSEGLTSDPDATNNPHVTFTPALYHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 367 HSP 3 Score: 93.9745 bits (232), Expect = 1.769e-16 Identity = 65/195 (33.33%), Postives = 91/195 (46.67%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHP-------------IDRLTTNEAS-------------QQAIKLTLAGL----PRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E C FY+KTG CK+G TC+++HP ++ IP S+S N S T +P ++ T P L P RPG+ +C +Y+KTG CK+G C+++HP L++N A+ Q + TL GL P+R G C YYMKTG CK+G C+F HP Sbjct: 272 EPMCTFYMKTGKCKFGLTCKFHHP-KDIQIP----------SSSQDNGSSEGLTSDPDATNNPHVTFT--------PALYHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQATGINYSLLSSNAANLNLGMVTPATSLYQTLSQPTLGGLSATYPQRPGQSECDYYMKTGECKFGERCRFHHP 447 HSP 4 Score: 93.2041 bits (230), Expect = 2.698e-16 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC Y++T +CK+G +C+++HP ++P + P + ++ + YP+RPG+ +C YY+KT CK+G RCKF+HP +Q A LP R C +YMKTG CK+G TCKF HP Sbjct: 178 EKDCTHYMQTRTCKFGDSCKFDHP---VWVPEGGI---------------------------PDWKEAPVVPNEE----------YPERPGEPDCPYYIKTQRCKYGSRCKFNHPRAEAAATVENQDA-------LPERPSEPMCTFYMKTGKCKFGLTCKFHHP 295 HSP 5 Score: 83.5741 bits (205), Expect = 3.339e-13 Identity = 45/109 (41.28%), Postives = 59/109 (54.13%), Query Frame = -3 Query: 513 YQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEAS-QQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 836 Y T P+L T+ L P+YPQR G+ +C +YM+T CKFGD CKF HP+ ++A + P R G CPYY+KT CKYG+ CKF+HP Sbjct: 156 YFTKRPKLESTSHL------------PIYPQRAGEKDCTHYMQTRTCKFGDSCKFDHPVWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSRCKFNHP 252
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Match: K7MCY1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.352e-65 Identity = 113/171 (66.08%), Postives = 134/171 (78.36%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVA-LGHSLI-ASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFY+KTGSCKYG +CRYNHPDRNA PP+A LG S++ +SA+NLNIG++NPA S YQ +PRLS P + + +YPQRPGQ ECD+YMKTG CKFG+RCK+HHPIDR + + Q +KLT AGLPRREG V CPYY+KTGTCK+GATCKFDHPPPGE Sbjct: 319 EVDCPFYMKTGSCKYGVSCRYNHPDRNAINPPIAGLGASILPSSAANLNIGLLNPAVSAYQAFEPRLSN---------PMVGIAETIYPQRPGQIECDFYMKTGVCKFGERCKYHHPIDRSALSLSKQATVKLTPAGLPRREGDVICPYYLKTGTCKFGATCKFDHPPPGE 480 HSP 2 Score: 100.138 bits (248), Expect = 1.569e-18 Identity = 63/192 (32.81%), Postives = 87/192 (45.31%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHP-------IDRLTTNEASQQA-------------IKLTLA-------GLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DCP++LKT CK+GS C++NHP S+ N ++ +S L P+RP + C +YMKTG+C++G CKFHHP D L+ N A Q IK ++ GLP R G V CP+YMKTG+CKYG +C+++HP Sbjct: 200 EPDCPYFLKTQRCKFGSKCKFNHPK---------------VSSENADV-----SSGL-----------------------------PERPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNSMMGGATGDTQPIKSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHP 342 HSP 3 Score: 90.8929 bits (224), Expect = 1.252e-15 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC Y+ T +CK+G +C+++HP ++P + + + +P +V T P+RPG+ +C Y++KT CKFG +CKF+HP ++++ A +GLP R C +YMKTG C+YG CKF HP Sbjct: 148 EKDCAHYMLTRTCKFGDSCKFDHP---VWVP-----------------------------------EGGIPDWKEVPNVV-TSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHP--KVSSENAD------VSSGLPERPSEPPCAFYMKTGKCRYGTACKFHHP 265 HSP 4 Score: 88.5817 bits (218), Expect = 7.579e-15 Identity = 56/200 (28.00%), Postives = 85/200 (42.50%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNI-GVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHP-------------------------IDRLTTNEASQQAIKLTLAG---------LPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E C FY+KTG C+YG+ C+++HP L ++ + +N + G + I P L + L P R G+ +C +YMKTG CK+G C+++HP I L ++ QA + L+ P+R G + C +YMKTG CK+G CK+ HP Sbjct: 242 EPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNSMMGGATGDTQPIKSLISPSLQNSKGL---------------PVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAINPPIAGLGASILPSSAANLNIGLLNPAVSAYQAFEPRLSNPMVGIAETIYPQRPGQIECDFYMKTGVCKFGERCKYHHP 426 HSP 5 Score: 82.0333 bits (201), Expect = 8.637e-13 Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = -3 Query: 513 VYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIK--LTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 755 +YPQRPG+ +C +YM T CKFGD CKF HP+ + + +T P R G CPY++KT CK+G+ CKF+HP Sbjct: 141 IYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHP 223
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Match: D7L0J2_ARALL (Enhancer of ag-4 1 OS=Arabidopsis lyrata subsp. lyrata GN=HUA1 PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.439e-65 Identity = 117/174 (67.24%), Postives = 138/174 (79.31%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIP-PVALGHSLIAS-ASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRL--TTNEASQQA-IKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFYLKTGSCKYG+TCRYNHP+R AFIP + +SL++S +NLN+G+V PA+S YQT+ T PTL YPQRPGQ+ECDYYMKTGECKFG+RC+FHHP DRL T+N+ASQQ +KL+LAG PRREG+++CPYYMKTGTCKYGATCKFDHPPPGE Sbjct: 340 EVDCPFYLKTGSCKYGATCRYNHPERTAFIPQATGINYSLVSSNTANLNLGMVTPATSFYQTL-------------TQPTLGALSATYPQRPGQSECDYYMKTGECKFGERCRFHHPADRLSATSNQASQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGE 500 HSP 2 Score: 108.227 bits (269), Expect = 4.499e-21 Identity = 62/187 (33.16%), Postives = 80/187 (42.78%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLA----------------------GLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DCP+Y+KT CKYGS C++NHP A + V TQ P+RP + C +YMKTG+CKFG CKFHHP D + + + L GLP R G V CP+Y+KTG+CKYGATC+++HP Sbjct: 225 EPDCPYYIKTQRCKYGSRCKFNHPREEAAVS------------------------------------------------VETQDALPERPSEPMCTFYMKTGKCKFGLTCKFHHPKDIQVPSSSQDNGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRPGEVDCPFYLKTGSCKYGATCRYNHP 363 HSP 3 Score: 94.7449 bits (234), Expect = 8.653e-17 Identity = 52/165 (31.52%), Postives = 78/165 (47.27%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC Y++T +CK+G +C+++HP ++P + P + ++ + YP+RPG+ +C YY+KT CK+G RCKF+HP + + +Q A LP R C +YMKTG CK+G TCKF HP Sbjct: 174 EKDCTHYMQTRTCKFGDSCKFDHP---IWVPEGGI---------------------------PDWKEAPVVPNEE----------YPERPGEPDCPYYIKTQRCKYGSRCKFNHPREEAAVSVETQDA-------LPERPSEPMCTFYMKTGKCKFGLTCKFHHP 291 HSP 4 Score: 83.9593 bits (206), Expect = 2.287e-13 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = -3 Query: 513 YQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEAS-QQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 836 Y T P+L T+ L P+YPQR G+ +C +YM+T CKFGD CKF HPI ++A + P R G CPYY+KT CKYG+ CKF+HP Sbjct: 152 YFTKRPKLESTSHL------------PIYPQRAGEKDCTHYMQTRTCKFGDSCKFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSRCKFNHP 248
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Match: K4DD74_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g017410.1 PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.754e-64 Identity = 113/174 (64.94%), Postives = 136/174 (78.16%), Query Frame = -3 Query: 501 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIAS-ASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDR----LTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHPPPGE 1007 EVDCPFYLKTGSCKYG TCRY+HP+RN V +G +L+AS A++ NIG+VNPA+SL+Q DPRL+ T L +P PVYPQRPGQ ECD+YMKTGECK+G++CKFHHP+DR ++ + Q +KLTLAGLPRREG+V CPYYMKTG CKYGA+CKFDHPPPGE Sbjct: 313 EVDCPFYLKTGSCKYGGTCRYSHPERNG----VGIGPALVASPATHWNIGMVNPAASLFQNFDPRLTHTML---GVLP------PVYPQRPGQVECDFYMKTGECKYGEKCKFHHPLDRSASAVSVKDVQQPNVKLTLAGLPRREGAVLCPYYMKTGMCKYGASCKFDHPPPGE 473 HSP 2 Score: 99.3673 bits (246), Expect = 2.422e-18 Identity = 62/194 (31.96%), Postives = 93/194 (47.94%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDR-------LTTNEASQQAIKL-----------------TLAGL-----PRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E C FY+KTG+CK+G+TC+++HP R+ +P S + N V S+ Y+ + L+ ++ L+ P RPG+ +C +Y+KTG CK+G C++ HP L + A+ I + T+ G+ P+R G V C +YMKTG CKYG CKF HP Sbjct: 237 EQQCTFYMKTGTCKFGATCKFHHP-RDIQLP----------SPTQKNGSVGKLGSANYEMTE----DVNLVKPLSVAALLHNSKGLPIRPGEVDCPFYLKTGSCKYGGTCRYSHPERNGVGIGPALVASPATHWNIGMVNPAASLFQNFDPRLTHTMLGVLPPVYPQRPGQVECDFYMKTGECKYGEKCKFHHP 415 HSP 3 Score: 98.9821 bits (245), Expect = 3.437e-18 Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = -3 Query: 513 EVDCPFYLKTGSCKYGSTCRYNHPDRNAFIPPVALGHSLIASASNLNIGVVNPASSLYQTIDPRLSQTTLLAQQTMPTLVGTQPVYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKL-TLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 1007 E DC Y++T +CK+G +C+++HP + P + + +S +L P+RPG+ +C Y++KT +CKFGDRCKF+HP D T Q +++ ++ LP R C +YMKTGTCK+GATCKF HP Sbjct: 138 EKDCAHYMQTRTCKFGDSCKFDHP-------------------------IWVPEGGIPNWKEVPVSTESL----------------PERPGEPDCPYFVKTKKCKFGDRCKFNHPKD--NTAHLFQGSVQNPGVSDLPERPSEQQCTFYMKTGTCKFGATCKFHHP 260 HSP 4 Score: 90.1225 bits (222), Expect = 1.986e-15 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = -3 Query: 513 VYPQRPGQTECDYYMKTGECKFGDRCKFHHPIDRLTTNEASQQAIKLTLAGLPRREGSVHCPYYMKTGTCKYGATCKFDHP 755 +YPQRPG+ +C +YM+T CKFGD CKF HPI + + + ++ LP R G CPY++KT CK+G CKF+HP Sbjct: 131 IYPQRPGEKDCAHYMQTRTCKFGDSCKFDHPIWVPEGGIPNWKEVPVSTESLPERPGEPDCPYFVKTKKCKFGDRCKFNHP 211 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 21
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BLAST of g.barbadense_cottongen_reftransV1_0094227 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094227 ID=g.barbadense_cottongen_reftransV1_0094227; Name=g.barbadense_cottongen_reftransV1_0094227; organism=Gossypium barbadense; type=contig; length=3073bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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