g.barbadense_cottongen_reftransV1_0094226, g.barbadense_cottongen_reftransV1_0094226 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Match: A0A061F6S6_THECC (Cc-nbs-lrr resistance protein OS=Theobroma cacao GN=TCM_030929 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 5.968e-69 Identity = 274/928 (29.53%), Postives = 408/928 (43.97%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVPTTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNEMIGAIPILQNLEELQVHQCGKMQVLFQT-----------------------VELRSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQGTEVLN-ISPQS---------LRKIRVSECNKLTSLSSLSHGH---RLQELLVDDCPRLTPLIISAK-------------IQKLELRR-------------ITSEQLSNLDICNCEEVEQITGKDQTSSHD-------HRLQPICF-----------------PN--------LTLISIFNCENLKCLFPITVAH-------------------------GGFPK----------------LLSAS----NLQTLEISNCSQLEEIIQE------------PQVSN----------------------ISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNVC----------LHSLMEVFVHGCNKLTSLSSLSHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFKGRDGNEI----------VLTLSSLQKLKVVNCPGLTPFIISTKI------QKLTLRRMEERKKMSNMMGEGGSS-VSMEYLKISNFRELF--DSSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDKDQKS---SQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFEGDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQV 2170 L L+ ++CLID ++ V T AF NL L + M+ + LCNG P+GFLQKLE L +C EM+ P LQ+L+E++V CG++Q +FQ EL+ I + H + LQSLK + IS CNSLKYLF S A SL L+ L+I C L+ II + + I P + L + +S C KL + +S RL+ + + D P+L + AK +Q+L+L ITS L NL +C ++ T + + + H ++ + + PN LT + + + + L+CL T H G PK ++S S NL+ +++ NC QL+E+ Q P +SN +SLQ L +++ CN L+YLF +A SL L L+I C GL+ II E + L L + + C KL + +L L + I + QL+ F ++ + V+ R GN I ++ SL+KL V NC L+ F I ++ ++L L + K + + + S V++EY+ + N ++F + S ++ + L L +L+ GPIQ + Q L L+V C L+Y+ SP + + LP L+ L I+ CEELE+II+ DQ S SQ HLQPI FP L + I+ C NLK LFP+ S K+K IS+ KLE+VF D +D++K I LP L L L LP+L S S GYHF FP + VK+CP L T FS+DS++ VHA T+ Sbjct: 1510 LALKDGKELECLIDTTEGHVSTNAFFNLVQLVMQEMIGFKMLCNGRIPKGFLQKLEKLEATNCMEMVSLSPALQDLKEVKVINCGQLQEVFQIDELLRDTEEPLLSNLTLMELHLLPELKWIWKGSTHFVRLQSLKYLAISFCNSLKYLFSPSLA-QSLVLLEHLNIYHCYGLQHIINELDCDDGIEPNAHLHSPFLPNLETLTISNCPKLEYVFQISLAQVPPRLKFVSISDSPQLQQVFNVAKEKHGVDRAIALPCLQQLQLGNLINLSCFFSENFLITSPSLENLVFWDCPKLTNFTIQKEVNEQAQLKDLGLHAMKDLLYNAKSLTLKGVMYQKNLVPNVDPKGLNELTFLLLKDGKELECLIDTTEGHVSTNAFFNLVQLVIQEMTGFKMLCNGRIPKGFLQKLEKLEATNCMEMVSLSPMLQNLKEVKVINCGQLQEVFQTDEILHDTKENQGPLLSNLTLMELHSLPELKLIWKGSTHFVSLQSLMFVEISYCNRLKYLFSPFLAQSLVLLEQLKIDHCNGLQHIITELEFDDEIESEDHPYSPLLPKLETLTISDCPKLEYVFQTPLAQVLPRLKFVWISNSPQLQQLFNVTKEENGVGRAIVLPCLQ---DLRLGNLINLSCFCSKNFLIAAPSLEKLVVFNCLKLSNFTIQKEVNQQAQLKELYLSDLGNDKGCNTINSQSSWSLVNLEYITVGNCVKIFQMQAGQFFSRVENIQLEHLHQLQ----GPIQVASLQCLRWLHVSKCNRLKYLLSPMLVRNLPHLTHLEINHCEELEEIIEMDQTSASLSQAHLQPISFPSLEIIRIYKCSNLKSLFPL-SITCSPSKVKIISIDGASKLERVFNLD----VEDDQKGIVLPNLQGLLLKELPSLKSLSQ-GYHFRFPCMHYAEVKECPKLNTSFSIDSKRVVHAITEA 2423 HSP 2 Score: 196.823 bits (499), Expect = 1.553e-48 Identity = 221/780 (28.33%), Postives = 340/780 (43.59%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVPTTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNEMIGAIPILQNLEELQVHQCGKMQVLFQTVEL-----------------------RSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQGTEVLN-ISPQS---------LRKIRVSECNKLTSLSSLSHGH---RLQELLVDDCPRLTPLIISAKIQKLELRRITSEQLSNLDICNCEEVEQITGKDQTSSHDHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQL------EEIIQEPQVSNISLQCLKEI----KVVNCNNLRY---LFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNVCLHSLMEVFVHGCNKLTSLSSLSHGHI----LKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFKGRDGNEIVLTLSSLQKLKVVNCPGLTPFIISTKIQKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISNFRELFDSSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDK----DQKSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFEGDEANVSKDE---EKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAE 2161 L L+ ++CLID ++ V T+AF NL L + M +++ LCNG P+GFLQKLE L +C EM+ P LQ+L+E++V CG++Q +FQ EL + I + H + LQSLK+++IS CNSLKYLF S A SL L L I C L+ II+ + + I P + L + +S C KL + +S RL+ + V D P+L +Q+ N+ V++ G D+ I P L + + N NL C F L+++ +L+ L +C +L +E+ ++ Q+ ++ L +K++ K + + Y L P L L L + LE +I TE +V ++ + ++ L +G I L+ L KLE +C+++ P L L+++KV+NC L +I +L LR EE LS+L + L L EL+ IW G V Q+L L + C SL+Y+FSP++AQ L L L I C L+ II++ D HL P L + I C L+Y+F I+ A P+LK +S+ + P+L+QVF NV+K++ ++ I LP L L LG L NL F + PSL++L DCP LT F++ E + A+ Sbjct: 1157 LALKDGKELECLIDTTEGHVSTSAFFNLVELVIQDMTSMKMLCNGQFPKGFLQKLEKLEATNCMEMVSLSPALQDLKEVKVINCGQLQEVFQIDELLHDAEETLLSNLALMELQLLPQLQWIWKGSTHFVRLQSLKILEISFCNSLKYLFSPSLAQ-SLVLLDQLKIYHCCGLQHIIKELDCDDGIEPNAHLHSPFLPKLETLTISNCPKLEYVFQISLAQVPPRLKFVWVSDSPQL-------------------QQVFNM-------VKEKHGVDRA---------IALPCLQQLQLGNLINLSCFFSENF-------LITSPSLENLVFWDCPKLTNFTIQKEVNEQAQLKDLGLHAMKDLLYNAKSLTLKGVMYQKNLVPNVDPKGLNELTFLALKDGKELECLIDTTEG-HVSTNAFFNLVQLVMQEMIGFKMLCNGRIPKGFLQKLEKLEATNCMEMVSLSP-------------------------------ALQDLKEVKVINCGQLQEVF---QIDEL-LRDTEEPL--------------------------------LSNLTLMELHLLPELKWIWKGSTHFVRLQSLKYLAISFCNSLKYLFSPSLAQSLVLLEHLNIYHCYGLQHIINELDCDDGIEPNAHLHSPFLPNLETLTISNCPKLEYVFQISLAQVP-PRLKFVSISDSPQLQQVF-----NVAKEKHGVDRAIALPCLQQLQLGNLINLSCFFSENFLITSPSLENLVFWDCPKLTN-FTIQKEVNEQAQ 1818 HSP 3 Score: 186.808 bits (473), Expect = 2.538e-45 Identity = 214/763 (28.05%), Postives = 352/763 (46.13%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVPTTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCN------EMIGAIPILQNLEELQVHQCGKMQVLFQTVELRSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQ-GTEVLNISPQSLRKIRVSECNKLTSLSSLSHGHR----------LQELLVDDCPRL----TPLIISAKIQKLELRRITSEQLSNLDICNCEEVEQITGKDQTSSHDHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEII---QEPQVSNISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNVCLHSLMEVFVHGCNK-LTSLSSLSHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFKGRDGNEIVLTLSSLQKLKVVNCPGLTPFIISTKIQKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISN---FRELF-------DSSYN-LSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDK----DQKSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFEGDEANVSKDE---EKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAE 2161 L L SC+ ++CLID + +Q PTTAFSNL +L + M +L+ELC+G P FLQ LETL + DC +M G + + NL L++ L SI + P H++SLQSLK V++ C+ LK +F A SL L+ L I C +LE++ ++ + + C +L S+ L R L+ + + C +L +P + A + EL+ S L +L I E ++I + S +C+P L + I +C++L+ +FPIT+A G L++++I +C QL + +E +I L L+ +++ + NLR P + CF K EASNV ++ ++ + L ++ SL+ ++ + D L + +++ G L + N + L + + +K++ C G P K++KL E +S + + ++ +K+ N +E+F D+ LS+L + L L +L+ IW G V Q+L L + C SL+Y+FSP++AQ L L +L I C L+ II + D HL P+L + I C L+Y+F I+ A P+LK + + + P+L+QVF N+ K++ ++ I LP L L LG L NL F + PSL++L DCP LT F++ E + A+ Sbjct: 758 LQLTSCDDLECLIDTTWEQSPTTAFSNLVNLDIGKMTSLKELCHGQSPNSFLQNLETLIICDCGQLQSVFQMNGQMLSISNLRSLELQSLPA---------LESIWKEPTHYVSLQSLKDVKVDGCDKLKSIFSPYLA-QSLLHLEQLKISACKKLEQVFAFAQDMAELEENQAPPLSNLICLELESVPELRCIWREPTHLVKLKSLKTMRIGSCSKLEYLFSPTLAQALVHLEELKIKESNSLKHL-IMEAENGDEIVSNKERSL-------LCWPKLKSLEIASCKSLRYVFPITLAQG-------LPYLESVQIIDCPQLMHVFNMAKEEDKHDIMLPKLQFLRLEDLENLRSFCPRN---------------CFVKLPSFKGLEASNVGARP-QDIEINAVKELLYNVKSLALTRVMYHKNLVPNVDPKGLNELTFLALKDGKELECLIDTTEGHVSTSAFFNLVELVIQDMTSMKML-CNGQFPKGFLQKLEKLEATNCMEMVSLSPALQD------LKEVKVINCGQLQEVFQIDELLHDAEETLLSNLALMELQLLPQLQWIWKGSTHFVRLQSLKILEISFCNSLKYLFSPSLAQSLVLLDQLKIYHCCGLQHIIKELDCDDGIEPNAHLHSPFLPKLETLTISNCPKLEYVFQISLAQVP-PRLKFVWVSDSPQLQQVF-----NMVKEKHGVDRAIALPCLQQLQLGNLINLSCFFSENFLITSPSLENLVFWDCPKLTN-FTIQKEVNEQAQ 1465 HSP 4 Score: 81.2629 bits (199), Expect = 2.543e-12 Identity = 184/777 (23.68%), Postives = 330/777 (42.47%), Query Frame = 2 Query: 152 FLQKLETLSLRDCN--EMIGAIPILQNLEELQVHQCGKMQVLFQTVELRSIEQW-------------PN---HHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDI----RRCSQLEEIIQGTEVLNISPQSLRKIRVSECNKLTSLSSLSHGHRLQELLVDDCPRLTPL------IISAKIQKLELRRITSEQLSNLDICNCEEVEQITGKDQTSSHDH----------RLQPIC--------FPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQEPQVSNISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIK-ATEASNVCLHSLMEVFVHGCNKLTSLSSL-------SHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFK-----GRDGNEIV-------LTLSSLQKLKVVNCPGLT-----------PFIISTKI----QKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISNFRELFDSSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTEL--NVRNCRSLRYIFSPTIA-----QYLPRLSELYISDCEELEQIIDKDQKSSQHHLQPICFPRLAEVIIFYCKNLKYL----FP-----------------ITSAYGGLPKLKTISLGNVPKLEQVFEGDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFV-FPSLDDLNVKDCPNLTTRFSVDSEQSV 2152 FL L TLS+R C+ E I ++ L++LE L++ + ++ + VEL ++ PN SLQ L V + ++ N L+ NSL +L +L + +C Q + + +I+ + + +++ ++S S + +EL + +LT + + + L +TS QL++ D C ++ + T++ + L+ +C NL + I +C L+ +F + ++LS SNL++LE+ + LE I +EP +SLQ LK++KV C+ L+ +F +A SL L L+IS C LE++ A + + + + + C +L S+ L +H LKSL + I C +LE F ++AQ L L E+ ++ K +G+EIV L L+ L++ +C L P++ S +I Q + + M + + ++M +++L++ + L +K + GL V Q + + EL NV++ R ++ + + L L+ L + D +ELE +ID +++ H+ F L E++I ++K L FP + S L LK + + N +L++VF+ DE + D E+ + L L ++L LP L HFV SL L + C +L FS QS+ Sbjct: 569 FLTNLRTLSIRRCHLLEDISSLRNLKDLEFLELVKVDLEELPKELVELGKLKSLYFSCFGDGPINVPPNLLSRLTSLQELHVPRDNNANLLEL--------NSLSRLTTLTLIVSTDQCFQENFVFPKLQSYSIAVNAYIEFPEKRISRILTISDCSSLNAFKELF-PNVQKLTLFKVMEHKTVVPNVDQWGLNELTSLQLTSCDDLEC-LIDTTWEQSPTTAFSNLVNLDIGKMTSLKELCHGQSPNSFLQNLETLIICDCGQLQSVFQMN------GQMLSISNLRSLELQSLPALESIWKEP-THYVSLQSLKDVKVDGCDKLKSIFSPYLAQSLLHLEQLKISACKKLEQVFAFAQDMAELEENQAPPLSNLICLELESVPELRCIWREPTHLVKLKSLKTMRIGSCSKLEYLFSPTLAQALVHLEELKIKESNSLKHLIMEAENGDEIVSNKERSLLCWPKLKSLEIASCKSLRYVFPITLAQGLPYLESVQIIDCPQLMHVFNMAKEEDKHDIMLP-----KLQFLRLEDLENLRSFCPRNCFVKLPSFKGLEASNV--GARPQDIEINAVKELLYNVKSLALTRVMYHKNLVPNVDPKGLNELTFLALKDGKELECLID----TTEGHVSTSAFFNLVELVIQDMTSMKMLCNGQFPKGFLQKLEKLEATNCMEMVSLSPALQDLKEVKVINCGQLQEVFQIDE--LLHDAEETL-LSNLALMELQLLPQLQWIWKGSTHFVRLQSLKILEISFCNSLKYLFSPSLAQSL 1314 HSP 5 Score: 77.7962 bits (190), Expect = 2.967e-11 Identity = 69/251 (27.49%), Postives = 112/251 (44.62%), Query Frame = 2 Query: 1544 NLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDKDQKSSQHHLQPICFPRLAEVIIFYCKN---LKYLFPITSAYGGLPKLKTISLGNVPKLEQVFE------------------------------GDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQVHFSPKLMFI 2197 ++S+L+ L L L L IW P V+ Q+L ++ V C L+ IFSP +AQ L L +L IS C++LEQ+ Q ++ L+ P L+ +I ++ L+ ++ + L LKT+ +G+ KLE +F GDE VS E ++ P+L L++ +L P+ P L+ + + DCP L F++ E+ H PKL F+ Sbjct: 835 SISNLRSLELQSLPALESIWKEPTHYVSLQSLKDVKVDGCDKLKSIFSPYLAQSLLHLEQLKISACKKLEQVFAFAQDMAE--LEENQAPPLSNLICLELESVPELRCIWREPTHLVKLKSLKTMRIGSCSKLEYLFSPTLAQALVHLEELKIKESNSLKHLIMEAENGDEI-VSNKERSLLCWPKLKSLEIASCKSLRYVFPITLAQGLPYLESVQIIDCPQLMHVFNMAKEEDKHD----IMLPKLQFL 1078
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Match: A0A061FRY5_THECC (Cc-nbs-lrr resistance protein, putative OS=Theobroma cacao GN=TCM_044524 PE=4 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 5.932e-68 Identity = 185/484 (38.22%), Postives = 265/484 (54.75%), Query Frame = 2 Query: 764 FPNLTLISIFNCENLKCLFPIT-VAHGGFPKLLSA-SNLQTLEISNCSQLEEIIQEPQVSNISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNVCLHSLMEVFVHGCNKLTSLSSLSHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFKG-------RDGNEIVLTLSSLQKLKVVNCPGLTPFIISTKIQKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISNFRELFD--SSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDKDQ--KSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFE-GDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQVH 2173 PN+ +S+ +C L+ +F I + H S S+L LE+ + +L+ I + P + LQ L I++V+C+ L LFP +IA SL L L I C LE II E N N++ S + L H L L+I +C +L FP +++ LP L + L++L Q K RDGN I L L +LQ+L V NCP LT FI+ +I++L+L ++ ++ ++ S +Y+ + N E+F Y+ SSL L+L L+E+R+IW Q V +NLT LNV +C+ L YIFSPT A+ L +L L I C++L++II +DQ SS LQPI FP L + + +CK LK LFP+ S LPKL+ + + +LEQVFE DEA V +E I QL +L L P+L+ F P GYHFV P L L V CP +TT F +DSE SVHA+ +V+ Sbjct: 296 LPNIKEVSVEDCAGLEVVFQINGLLHASEENQTSMLSSLTNLELDSLPELKHIWKGPP-HLVKLQSLGVIRIVSCDKLASLFPATIAQSLVHLEELHIHDCSELEHIITEAETDN--------------NEIVSNTHL-HPLCWPKLRTLDISNCPRLRYVFPTFVSECLPRLEVLCLKDLAQLKQVFSPAKERDGNNIPLKLLALQELSVENCPQLTCFIVQDQIKELSLSKLGNSSQLC-----ISTNCSQDYIAVGNHEEVFQVQGEYSFSSLNVLHLEDLSEVRLIWKDVPQVVTLENLTTLNVIDCKRLSYIFSPTTARGLSQLVCLNIQKCDKLDRIIAEDQVCSSSNADLQPISFPNLTTISVGFCKKLKSLFPLGSV-RCLPKLEKLIVERNSELEQVFELEDEAEVIIKKE--IKFDQLEELSLQEQPSLIDFCPSGYHFVLPDLKCLMVTKCPKMTTCFFIDSEYSVHAKAEVY 755 HSP 2 Score: 135.576 bits (340), Expect = 1.598e-29 Identity = 146/475 (30.74%), Postives = 214/475 (45.05%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVP--TTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNEMIGAIPILQNLEELQVHQCGKMQVLFQT--------------------------VELRSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQGTEVLN--------ISPQSLRKIR-----------------VSEC---------------NKLTSLSSLSHGHR-------LQELLVDDCPRLTPLIISAKIQKLELRRI-TSEQL--------SNLDICNCEEVEQITGKDQTSS---------HDHRL------QPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQEPQV---SNISLQC-----LKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNV 1105 ++R C ++ LID +++Q P AF NL L+L +M+ L+ELC+G P GFLQKLE L++ +CN +I AIP L N++E+ V C ++V+FQ EL+ I + P H + LQSL V++I C+ L LFP + A SL L+ L I CS+LE II E N + P K+R VSEC ++ S + G+ LQEL V++CP+LT I+ +I++L L ++ S QL + + N EEV Q+ G+ SS + RL Q + NLT +++ +C+ L +F T A G S L L I C +L+ II E QV SN LQ L I V C L+ LFP+ L L L + LE++ + + + V Sbjct: 222 FNIRDCKDLEYLIDTTQEQGPHSAAAFCNLVILTLTNMICLKELCHGRFPNGFLQKLEILTILECNNLIVAIPDLPNIKEVSVEDCAGLEVVFQINGLLHASEENQTSMLSSLTNLELDSLPELKHIWKGPPHLVKLQSLGVIRIVSCDKLASLFPATIA-QSLVHLEELHIHDCSELEHIITEAETDNNEIVSNTHLHPLCWPKLRTLDISNCPRLRYVFPTFVSECLPRLEVLCLKDLAQLKQVFSPAKERDGNNIPLKLLALQELSVENCPQLTCFIVQDQIKELSLSKLGNSSQLCISTNCSQDYIAVGNHEEVFQVQGEYSFSSLNVLHLEDLSEVRLIWKDVPQVVTLENLTTLNVIDCKRLSYIFSPTTARG-------LSQLVCLNIQKCDKLDRIIAEDQVCSSSNADLQPISFPNLTTISVGFCKKLKSLFPLGSVRCLPKLEKLIVERNSELEQVFELEDEAEV 688
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Match: A0A061FX91_THECC (Cc-nbs-lrr resistance protein, putative OS=Theobroma cacao GN=TCM_044542 PE=4 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 4.833e-67 Identity = 254/790 (32.15%), Postives = 388/790 (49.11%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVP--TTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNEMIGAIPILQNLEELQVHQCGKMQVLFQTVELRSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSA---ANNS-----LGQLQSLDIRRCSQLEEIIQGTEVLNISPQSLRKIRVSECNKLTSLSSLSHGHRLQELLVDDCPRLTPLIISAKIQKLELRRITSEQLSNLDICNCEEVEQITGKDQTSSH----DHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQ----EPQVSNISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISWCFGLEEI---------------IKATEASNV-------------CLHSLMEVFVHGCNKLTSLSS---------LSHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQFK-------GRDGNEIVLTLSSLQKLKVVNCPGLTPFIISTKIQKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISNFRELFD--SSYNLSSLKFLNLFGLTELRVIWNGPI-QAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDKDQ--KSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFEGDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQV 2170 ++R C ++ LID +++Q P AF NL L+L +M+ L+ELC+G P GFLQKLE L++ +CN +I AIP L N +K + + DC L+ +F ++ AN L L +L++ +L+ I G L + QSL IR++ C+KL SL P I+ + LE L I +C E+E I + +T ++ D L +C+P L + I C L+ +FP T A G L+ +EI + QL+++ E ++SL+ L+ +++ + L LFP S+A SL L LQI C LE+I +K E N CL L + + C L + S L + L LT L+I C +LE FP +A+ LP L + LE+L Q + RDG++I+L L +LQ L V NCP LT FII +I++L L ++ ++ ++ + +Y+ + N+ E+F Y+ SS+K L+L L+++ IW + Q V +NLT L V +C+ LR+IFSPT A+ L +L +L I+ C+EL+QII +D+ SS + PI FP L + + +CK LK L P+ SA L KL+++ + KLEQVFE ++ + EK I +L L L LP+L+ F P+GYHFV L+ L V++CP LTT F +DSE+ VHA+ + Sbjct: 763 FNIRDCKDLEYLIDTTQEQGPHSAAAFCNLVILTLTNMICLKELCHGRFPNGFLQKLEILTISECNNLIVAIPGLPN------------------------------------IKELSVEDCARLEVVFQINGRLHANEENQTSMLSSLTNLELDSLPELKHIWTGPPHL-VKLQSLEVIRIASCDKLASL--------------------FPATIAQSLVHLE----------ELHIHDCSELEHIITEAETDNNEIVSDTHLHSLCWPKLKTVHISCCPKLEYMFPNTSAQG-------LPCLELVEIIHSPQLKQVFNMASSEVSTYHLSLRKLRLVEI-SSKTLASLFPKSVAESLVQLEILQIDRCPLLEQIFSEMKVSTHHANPPGLKDLEVRNCHRLPILFSVPLTPCLVQLERLELENCTILEQIISNKGVGDDKVLKNPLCLSKLTTLKIIACPRLEYIFPGFVAERLPQLKVLHLEDLAQIEQVISPADDRDGDDILLKLPALQTLSVKNCPQLTSFIIQAQIKELYLSKLGNSNQLC-----ISANCNQDYIAVGNYEEVFQVHGGYSFSSIKELHLEHLSKVHNIWRSDVAQVVTLENLTILEVNDCKRLRHIFSPTTARSLSQLVDLNITKCDELDQIIAEDEVCSSSNRYPNPISFPNLTTISVRFCKKLKSLSPLGSA-CCLSKLQSLRVQGNSKLEQVFEPEDEEEAI-AEKEIKFDRLRLLSLEELPSLIDFCPMGYHFVLSDLNCLIVEECPKLTTGFFIDSEKYVHAKAKA 1470
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Match: A0A0D2QXW3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G436600 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.202e-65 Identity = 262/808 (32.43%), Postives = 387/808 (47.90%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVPTTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNE-------------MIGAIPILQNLEELQVHQCGKMQVLFQTVELRSIEQWPNHHL--SLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLE---------EIIQGTEVLNISPQSLRKIRVSECNKLTSLSSLSHGHRLQELLVDDCPRLTPLI---------------ISAKIQKLELRRITSEQ---------LSNLDICNCEEVEQITG-KDQTSSHDHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQ-EPQVSNISLQ------CLKEIKVVN---CNNLRYLFPMSIANSLGGLRTLQISWCFGLEEIIKATEASNVCLHSLMEVFVHGCNKLTSLSSL-SHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQF-------KGRD--GNEIVLTLSSLQKLKVVNCPGLTPFIISTK-IQKLTLRRMEERKKMSN----MMGEGGSSVSMEYLKISNFRELFD--SSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQ-IIDKDQ-----KSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLP---KLKTISLGNVPKLEQVFEGDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQV 2170 L L+SCN M+ LID K Q T AFSNL L + SM +L+ LC G P FLQ L+ + ++DC E M P+L NL L++H K++ R E P+H SLQSLKVV I C++LK +F A S+ LQ L I C +LE EII+ +L P+ LR +R+ +C L +S+ + L+ + + C +L + + LELR + + L L I NC +E ++ KDQ+S + P L + I CENLK L + G P L+ ++I +C +L +I E LQ C +++++ C NL+Y+ + L L ++ I C L ++ ME HG + L L S H L L I DC L+ F +++QG PLL + L+N PQ + RD + I+L + L+ L+V NCP ++ FI+ + I+ L L + +++ N ++ EG + + N E+F Y+ S++K L L L E+RVIWN Q V +NLT L + C LRYIFSP +A+ L L +L+I CEE+E+ I+ KDQ + LQP+ FP L +I+ CKNL LFP +G +P KL+T+ + KLEQV E V E+ + +L L L +LP L+ F P GYHFVFP++ +L V+DCP L T F +DS++ VH +T+ Sbjct: 276 LQLKSCNDMEFLIDTKKDQGSTVAFSNLVELIIESMASLKGLCYGVSPTRFLQNLKEVIIKDCEELQVIFQIDKLSEKMKCQTPLLSNLTILRLHSLPKLK--------RIWEVKPSHRAIASLQSLKVVSIESCDNLKTIFSPCLAL-SMLHLQQLYISYCDRLEQVIGFGQEDEIIENDCLLYCWPK-LRVLRIKDCESLKYISTNTLIQSLESVFIVKCHQLIQIYNMEQNIVLPERGSQEYLTNLTSLELRSLPKLKYMWNGPLVHLQYLVIWNCNSLEHLSNIKDQSS--------LFLPKLKDVRISGCENLKYL----CSSQGLP------CLEAIDIKDCPRLIQIFNMEKNKDGFGLQNDSSLCCWPKLRILRIEFCRNLKYVCANTWTQGLQSLESVYIRHCSQLIQVFN------------MEQNKHGQD--IVLPELGSQNHCWTKLKTLRIEDCQLLKYLFANTLSQGFPLLESIYLKNCPQLLQVFSSTEERDVIDDHILLNVPFLKNLEVSNCPQISCFILQAQLIEDLVLSNVGNSRQLCNTDVPVLNEGC-------IVVGNQEEVFQVQGGYSFSTIKLLELRNLFEVRVIWNDFAQIVTLENLTTLTLSGCNKLRYIFSPMMARSLSHLVDLFIEWCEEIERLILAKDQVSSSSSNGDTSLQPMSFPNLKRIIVINCKNLNSLFP----FGFVPVLLKLETLIVTRNSKLEQV-FELEEKVEVVAEEEMKFDKLEWLSLEKLPGLIHFCPKGYHFVFPAMIELEVRDCPKLATGFFIDSQEFVHCKTKA 1029
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Match: A0A061F4W4_THECC (Cc-nbs-lrr resistance protein, putative OS=Theobroma cacao GN=TCM_030915 PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.991e-61 Identity = 206/656 (31.40%), Postives = 313/656 (47.71%), Query Frame = 2 Query: 344 VQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQGTEVLNISPQSLRKIRVSECNKLTSLSSLSHGHRLQELLVDDCPRLTPLIISAKIQKLELRRITSEQ---LSNLDICNCEEVEQITGKDQTSSHDHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQEPQVSNISLQCLKEIKVVNCNNLRYLFPM--------SIANSLGGLRTLQISWCFGLEEIIKATEASNVCLHSLMEVFVHGCNKLTSLSSLSHGHILKSLTKLEIYDCLQLEDTFPISMAQGXXXXXXXXXXXXXQ----------FKG---------------------RDGNEIVLTLSSLQKLKVVNCPGLTPFIISTKI-QKLTLRRMEERKKMSNMMGEGGSSVSMEYLKISNFRELFDSSYNLSSLKFLNLFGLTELRVIWNGPIQAVNFQNLTELNVRNCRSLRYIFSPTIAQYLPRLSELYISDCEELEQIIDKDQ--KSSQHHLQPICFPRLAEVIIFYCKNLKYLFPITSAYGGLPKLKTISLGNVPKLEQVFE-GDEANVSKDEEKVIHLPQLTDLDLGRLPNLMSFSPVGYHFVFPSLDDLNVKDCPNLTTRFSVDSEQSVHAETQVH 2173 V + C+ ++FP +LQS +I + E +G EVL SLR +R+ + + SSL + +EL + ++KL L ++T E + N+D C +E LT + + CENL+CLF T SNL L+I+ + L+E+ Q S L+ L+ + +V+C L+ +F M S ++ LR+L+++ LE I K +V L SL EV +HGC+KL S+ S L L L I +C +L+ F + + +KG +++ SL+KLKV NCP L F I ++ +++ L + + +++ ++ + EY+ + + ++F +K L+L L+E ++IW Q V +NLT L V +C+ LRYIFSPTIA+ L RL L I +C+EL+QII +DQ SS LQPI FP L + + YCK LK+LFP+ SA LPKL+ + + KLEQVFE DEA + EK I QL +L L LP+L+ F P GYHFV +L +VK CP +TT F +DS+ VHA+T+V+ Sbjct: 680 VSTNQCSQENFVFP---------KLQSYNI----AVSEYYEGIEVL--EGLSLRTLRIRDFS-----SSL---NAFKELFCN-------------VEKLTLSKVTMEHKNIVPNVDQCGLKE------------------------LTSLELVYCENLECLFDTTREQSPTTAF---SNLVKLDITFMTSLKELCH-GQSSISFLKRLETLHIVDCKQLQSVFQMNWLFGKEESPTRTISSLRSLELTSLPALENIWKEP-THHVRLQSLKEVTIHGCDKLKSIFSPCLAQSLLHLETLNISECEKLKQVFAFDKEMADLEAVPLSNLRSLKLRLLPALESIWKGPAHCAIGLPCLQDFQLVNLINLSSENFLISSPSLEKLKVCNCPKLRNFTIQKEVNEQIQLEELYLSELVNSFQLRISANCNQEYIAVGSHEQVFQVH---GRIKELHLEDLSEEQIIWKDVAQVVTLENLTILEVIDCKRLRYIFSPTIARSLSRLVNLEIQNCDELDQIIAEDQVCSSSDDDLQPISFPNLTIISVKYCKKLKHLFPLGSAR-CLPKLEELKVEGNSKLEQVFELEDEAEATT--EKEIKFDQLRELSLKELPSLVDFCPRGYHFVLSALHYFSVKGCPKMTTGFFIDSKTYVHAKTEVY 1264 HSP 2 Score: 117.857 bits (294), Expect = 8.954e-24 Identity = 136/492 (27.64%), Postives = 219/492 (44.51%), Query Frame = 2 Query: 2 LDLRSCNGMKCLIDASKQQVPTTAFXXXXXXXXXXXXXXXXXCNGPQPQGFLQKLETLSLRDCNEM--IGAIPILQNLEELQVHQCGKMQVLFQTV--ELRSIEQWPNHHLSLQSLKVVQISDCNSLKYLFPMSAANNSLGQLQSLDIRRCSQLEEIIQ-GTEVLNISPQSLRKIRVSECNKLTSLSSLSHG-------------------------------HRLQELLVDDCPRLTPLIISAKI-QKLELRRITSEQLSN---LDI-CNC----------EEVEQITGK-----------DQTSSHDHRLQPICFPNLTLISIFNCENLKCLFPITVAHGGFPKLLSASNLQTLEISNCSQLEEIIQEPQVSN--------ISLQCLKEIKVVNCNNLRYLFPMSIANSLGGLRTLQISW------CFGLEEIIKATEASNVCLHSLMEVFVHGCNKLTSLSSLSHGHILKSLTKLEIYDCLQLEDTFPI 1249 L+L C ++CL D +++Q PTTAFSNL L + M +L+ELC+G FL++LETL + DC ++ + + L EE ++ L T L +I + P HH+ LQSLK V I C+ LK +F A SL L++L+I C +L+++ E+ ++ L +R + L +L S+ G L++L V +CP+L I ++ ++++L + +L N L I NC E+V Q+ G+ +Q D Q + NLT++ + +C+ L+ +F T+A S S L LEI NC +L++II E QV + IS L I V C L++LFP+ A L L L++ F LE+ +AT + L E+ + L + +L +L + C ++ F I Sbjct: 769 LELVYCENLECLFDTTREQSPTTAFSNLVKLDITFMTSLKELCHGQSSISFLKRLETLHIVDCKQLQSVFQMNWLFGKEESPTRTISSLRSLELTSLPALENIWKEPTHHVRLQSLKEVTIHGCDKLKSIFSPCLA-QSLLHLETLNISECEKLKQVFAFDKEMADLEAVPLSNLRSLKLRLLPALESIWKGPAHCAIGLPCLQDFQLVNLINLSSENFLISSPSLEKLKVCNCPKLRNFTIQKEVNEQIQLEELYLSELVNSFQLRISANCNQEYIAVGSHEQVFQVHGRIKELHLEDLSEEQIIWKD-VAQVVTLENLTILEVIDCKRLRYIFSPTIAR-------SLSRLVNLEIQNCDELDQIIAEDQVCSSSDDDLQPISFPNLTIISVKYCKKLKHLFPLGSARCLPKLEELKVEGNSKLEQVFELEDEAEATTEKEIKFDQLRELSLKELPSLVDFCPRGYHFVLSALHYFSVKGCPKMTTGFFI 1251 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094226 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094226 ID=g.barbadense_cottongen_reftransV1_0094226; Name=g.barbadense_cottongen_reftransV1_0094226; organism=Gossypium barbadense; type=contig; length=2374bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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