g.barbadense_cottongen_reftransV1_0094222, g.barbadense_cottongen_reftransV1_0094222 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094222
Unique Nameg.barbadense_cottongen_reftransV1_0094222
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1911
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FBK77_ARATH (F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana GN=At3g61590 PE=1 SV=1)

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 268/414 (64.73%), Postives = 335/414 (80.92%), Query Frame = -3 
Query:  563 MEGETSWNSHCADDMSKDIGEFDSFSELSDEGNKETIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSH-VLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSH-------NYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXP----VPGPLTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1768
            ME ETSW ++    ++  + E +S+ E SD+  K    S+DS+LPDDLLERIL++LPIASIFRAG+VC+RW+EIVSS+RFL NFS+  +SQ+PWYFMFT++D+P GYAYDPI+RKWY+ +LPCI+T NWF+ASSCGLVCFMDND R++++V NPITK  + L EPPG K +DY+A+S SV+R +        +Y++SIVKSKQVPGNF QWDLSIH+Y SETM W T + +VL+GWRGG+ESVIC+ VLYF+IYSTG    ++RH L+A NLSS  SP    L+     +P  LTCGRLMNL+ +LV+VGGIGK DRP++IKGIGIWVL G+ WVE+ +MP +FFQGFGE D+VFASSGTD+L+YIQSYG+PALL FDMN K W+WS KCPV+KKFPLQLFTGFCFEPRLEIAP
Sbjct:    1 MEAETSWTNYPYSYITY-VPEAESYREQSDDEAKVETFSMDSLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTTDDPSGYAYDPIIRKWYSFDLPCIETSNWFVASSCGLVCFMDNDCRNKIYVSNPITKQWRTLIEPPGHKSTDYTAMSTSVNRANQAVNRANRSYSVSIVKSKQVPGNFFQWDLSIHLYSSETMTWTTLVNDVLSGWRGGNESVICNNVLYFMIYSTG--GSDHRHGLIASNLSSIGSPSSGILMRSFIPMPCSLTCGRLMNLRERLVIVGGIGKHDRPEVIKGIGIWVLKGKEWVEMAKMPQRFFQGFGEFDEVFASSGTDDLVYIQSYGSPALLTFDMNLKYWRWSQKCPVTKKFPLQLFTGFCFEPRLEIAP 411
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FK111_ARATH (F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana GN=At5g15710 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.282e-23
Identity = 103/370 (27.84%), Postives = 162/370 (43.78%), Query Frame = -3 
Query:  566 SILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMF--TSSDEPVGYAYDPILRKWYTIELPCIQT-PNWFIASSCGLVCFMDNDSRS-ELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWR-GGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGPLTCGRLM-NLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGR--NWVEVGRMPHKFFQGFGELD-DVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCF-EPRLEIA 1645
            ++LP+DLL  ILA +P   IFR  SVC++W+ I+    FL   S+V S  P    F   S   P    +   L+ WY I    +     W + SS GLVCF   D  +    VCNP+ +  + L   P M ++    L + V R+  ++   ++ +  + G+     L   +YDS+T  W  SL +++        +   CD  LY           E    L        S          P  L  G L+   + +L +VG IG       ++ + IW L+    +WVE+ RMP K+F+    L  + F   G DNLI   S+     L++++++K+W W   C +         +  CF EPR + +
Sbjct:  105 AMLPEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQIPQCSVFSLPLKTWYKIPFTFLPPWAFWLVGSSGGLVCFSGLDGLTFRTLVCNPLMQSWRTL---PSMHYNQQRQLIMVVDRSDKSF--KVIATSDIYGDK---SLPTEVYDSKTDKW--SLHQIMPAVNLCSSKMAYCDSRLYL----------ETLSPLGLMMYRLDSGQWEHIPAKFPRSLLDGYLVAGTQKRLFLVGRIG---LYSTLQSMRIWELDHTKVSWVEISRMPPKYFRALLRLSAERFECFGQDNLICFTSWNQGKGLLYNVDKKIWSWISGCALQ-----SCNSQVCFYEPRFDAS 446
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FBX6_ARATH (F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.427e-19
Identity = 92/367 (25.07%), Postives = 165/367 (44.96%), Query Frame = -3 
Query:  581 LPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFI--ASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYS----ALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP--LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRN--WVEVGRMPHKF---FQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSK-KFPLQLFTGFCFEP 1639
             P DL E +++ LP+A+ F+  +VCR+W+ ++ S  F   F+ +    PW++  T  +   G  YDP L+KW+   +P +   +  +  AS+ GLVCF+D   R+  +V NP+T   K  +E P   F  +S     ++L+ + TSH Y +  V  +   G +  +D   +++     + +     VL  ++   + V     LYF++       PE    +++Y+              +PGP  L+   L     +L++VG + K    +    + IW L      W EV RMP+ +   F G     +   + G   L+ ++S     L+ ++   + W     C V + +  L +  G  F P
Sbjct:  120 FPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSGQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLDIGHRN-FYVSNPLT---KSFRELPARSFKVWSRVAVGMTLNGNSTSHGYKVLWVGCE---GEYEVYDSLSNVWTKRGTIPSNIKLPVLLNFK--SQPVAIHSTLYFMLTD-----PE---GILSYD----MVSGKWKQFIIPGPPDLSDHTLAACGERLMLVGLLTK----NAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLSLRSRQMNRLITYNAVTREWTKVPGCTVPRGRKRLWIACGTAFHP 461
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: UFO_ARATH (Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.023e-17
Identity = 94/375 (25.07%), Postives = 159/375 (42.40%), Query Frame = -3 
Query:  632 SILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMF------------------TSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDS-RSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETM---------MWA-TSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP----LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRN--WVEVGRMPHKFFQGFG--ELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCP 1645
            S LP  LL+R++A+LP  + FR   VC+R++ ++ S  FL  +  +L  +   F+F                    S++  G+ +DP   +WY +    I +  +   SS GLV ++  ++    + +CNP+     +L  PP  +   + ++ LSV+ TS + T++        G+ L    ++    SE+          +WA TS    L     G + V   G  Y + YS          S+++Y             I +  P    L    L+  KG+L++V  + K  + ++ K + +W L   N  WVE+ RMP   +  F   E    F   G    + I   G    L+FD+ +K W W   CP
Sbjct:   48 SKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCFLFFKHKTLKSYIYKRGGTNDDDSNKAEGFLFDPNEIRWYRLSFAYIPSGFYPSGSSGGLVSWVSEEAGLKTILLCNPLVGSVSQL--PPISRPRLFPSIGLSVTPTSIDVTVA--------GDDLISPYAVKNLSSESFHVDAGGFFSLWAMTSSLPRLCSLESG-KMVYVQGKFYCMNYSP--------FSVLSYE------VTGNRWIKIQAPMRRFLRSPSLLESKGRLILVAAVEK-SKLNVPKSLRLWSLQQDNATWVEIERMPQPLYTQFAAEEGGKGFECVGNQEFVMIVLRGTSLQLLFDIVRKSWLWVPPCP 396
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FBX13_ARATH (F-box only protein 13 OS=Arabidopsis thaliana GN=FBX13 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.780e-11
Identity = 57/221 (25.79%), Postives = 98/221 (44.34%), Query Frame = -3 
Query: 1004 LPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIE----LPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICD-----GVLYFLIYSTGVGTPEN 1639
            L DD+LER+L++LP +  FR  SVC+RW    +SK F    S + ++ PW+FM  +      + +D     W  +     L   +     +ASS GL+C+  + S  +  + NP+T   + +            A++++ +  + +    +  S ++P      +LS  IY+S    W  S  + L   +  D S+  D     G +YFL     V    N
Sbjct:   70 LNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSIS-GDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIP------NLSFKIYESNADSW--SKDQELESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASN 281
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FB341_ARATH (F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.509e-9
Identity = 54/213 (25.35%), Postives = 98/213 (46.01%), Query Frame = -3 
Query: 1034 SILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKL---QEPPGMKF---SDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMW---ATSLTEVLTGWRGGDESVICDGVLYFLI 1645
            ++ PD+++ +ILA LP+ S+FR  SVC+ W+ + S K F   F+  LS K    +   SD       D  LR    + L  ++       SS GL+C      +   +VCNP T+  +KL   +E P  +F    + + + L+   + + + + +    +  G          ++DSE+  W    + L E        ++ V  +G+L++L+
Sbjct:    7 ALFPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQ-LSVKEQLLVAEVSDSSSLICVDN-LRGVSELSLDFVRDRVRIRVSSNGLLCCSSIPEKGVYYVCNPSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICLVFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLM 217
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FB204_ARATH (F-box protein At3g56470 OS=Arabidopsis thaliana GN=At3g56470 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.062e-7
Identity = 52/211 (24.64%), Postives = 89/211 (42.18%), Query Frame = -3 
Query: 1037 LPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELP-------CIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWD-LSIHIYDSETMMWATSL--TEVLTGWRGGDESVICDGVLYFL 1639
            LP DLL+ +++ LP+    RA +VC+ WHE   S R       V+   PW   F+ +D+     YDP ++K   +  P       C     W +         M N +  +L   NP T+ C  +   P +  +    ++ S + TS +  +  V S       + W+ ++I  Y +    W TS+    +   +   ++ V  +GV Y L
Sbjct:   32 LPCDLLQLVISRLPLKDNIRASAVCKTWHEACVSLR-------VIHTSPWLIYFSKTDDSYE-LYDPSMQKNCNLHFPELSGFRVCYSKDGWLL---------MYNPNSYQLLFFNPFTRDCVPM---PTLWMAYDQRMAFSCAPTSTSCLLFTVTS-------VTWNYITIKTYFANAKEWKTSVFKNRLQRNFNTFEQIVFSNGVFYCL 215
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FK117_ARATH (F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana GN=At5g42350 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.308e-7
Identity = 28/85 (32.94%), Postives = 44/85 (51.76%), Query Frame = -3 
Query: 1397 LPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVG----YAYDPILRKWYTIELPCIQ 1639
            LPDD+LE  L  LP+ S+  A  VC++W  + +++RFL        Q PW F+F +  +       + YD    KW+ IE   ++
Sbjct:  135 LPDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGCSSGDIHGYDVSQDKWHRIETDLLK 219
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Match: FK118_ARATH (F-box/kelch-repeat protein At5g42360 OS=Arabidopsis thaliana GN=At5g42360 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.424e-7
Identity = 28/85 (32.94%), Postives = 44/85 (51.76%), Query Frame = -3 
Query: 1397 LPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVG----YAYDPILRKWYTIELPCIQ 1639
            LPDD+LE  L  LP+ S+  A  VC++W  + +++RFL        Q PW F+F +  +       + YD    KW+ IE   ++
Sbjct:  135 LPDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGCSSGDIHGYDVSQDKWHRIETDLLK 219
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Match: I1JRW3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0
Identity = 304/405 (75.06%), Postives = 350/405 (86.42%), Query Frame = -3 
Query:  563 MEGETSWNSHCADDMSKDIGEFDSFSELSDEGNKE-TIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP--LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1768
            M GETSW SH  DD  ++ G FDSF ELS+EG KE T +S+D +LPDDLLERILAYLPIASIFRAG V +RWHEIV+S+RF+WN SHVL QKPWYFMFTSSDEP G+A+DP+LRKWY+IELPCI T NWFIASS G+VCFMDNDSRSEL +CNPITK  +KL+EPPG+KFSDYSAL++SV+R SH YT++IVKSKQVP N++QWD+SIH+Y+SE  +W TSLTEVL GWRGG+ESVIC+ +LYFL+YSTG G  ENRH+LVAYN+S+ SS    +   +P P  LTCGRLMNLK KLVMVGGIGKPDRPDIIKGIGIW+LN + W E+ RMPHKFFQGFGELDDVFASSG D+LIYIQSYGAPALL+FD+N K WKWS KCPVSK+FPLQLFTGFCFEPRLEIAP
Sbjct:    1 MAGETSWISH-YDDRQRETGAFDSFLELSEEGEKEATAVSLD-VLPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFVWNLSHVLPQKPWYFMFTSSDEPGGHAFDPLLRKWYSIELPCIGTSNWFIASSYGMVCFMDNDSRSELCICNPITKTYRKLEEPPGLKFSDYSALAISVNRESHRYTVAIVKSKQVPDNYVQWDISIHLYNSENAIWVTSLTEVLMGWRGGNESVICNEMLYFLVYSTGGGQSENRHALVAYNMSNHSSQGSLTRNFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKKWEEIARMPHKFFQGFGELDDVFASSGADDLIYIQSYGAPALLIFDVNHKQWKWSQKCPVSKRFPLQLFTGFCFEPRLEIAP 403
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Match: A0A0B2RQJ7_GLYSO (F-box/kelch-repeat protein OS=Glycine soja GN=glysoja_028980 PE=4 SV=1)

HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0
Identity = 304/405 (75.06%), Postives = 350/405 (86.42%), Query Frame = -3 
Query:  563 MEGETSWNSHCADDMSKDIGEFDSFSELSDEGNKE-TIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP--LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1768
            M GETSW SH  DD  ++ G FDSF ELS+EG KE T +S+D +LPDDLLERILAYLPIASIFRAG V +RWHEIV+S+RF+WN SHVL QKPWYFMFTSSDEP G+A+DP+LRKWY+IELPCI T NWFIASS G+VCFMDNDSRSEL +CNPITK  +KL+EPPG+KFSDYSAL++SV+R SH YT++IVKSKQVP N++QWD+SIH+Y+SE  +W TSLTEVL GWRGG+ESVIC+ +LYFL+YSTG G  ENRH+LVAYN+S+ SS    +   +P P  LTCGRLMNLK KLVMVGGIGKPDRPDIIKGIGIW+LN + W E+ RMPHKFFQGFGELDDVFASSG D+LIYIQSYGAPALL+FD+N K WKWS KCPVSK+FPLQLFTGFCFEPRLEIAP
Sbjct:    1 MAGETSWISH-YDDRQRETGAFDSFLELSEEGEKEATAVSLD-VLPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFVWNLSHVLPQKPWYFMFTSSDEPGGHAFDPLLRKWYSIELPCIGTSNWFIASSYGMVCFMDNDSRSELCICNPITKTYRKLEEPPGLKFSDYSALAISVNRESHRYTVAIVKSKQVPDNYVQWDISIHLYNSENAIWVTSLTEVLMGWRGGNESVICNEMLYFLVYSTGGGQSENRHALVAYNMSNHSSQGSLTRNFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKKWEEIARMPHKFFQGFGELDDVFASSGADDLIYIQSYGAPALLIFDVNHKQWKWSQKCPVSKRFPLQLFTGFCFEPRLEIAP 403
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Match: V7BRP3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G109200g PE=4 SV=1)

HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0
Identity = 300/405 (74.07%), Postives = 346/405 (85.43%), Query Frame = -3 
Query:  563 MEGETSWNSHCADDMSKDIGEFDSFSELSDEGNKE-TIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP--LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1768
            M GETSW SH  DD  ++ G FDSF EL +EG+K+ T +S+D ILPDDLLERILAYLPIASIFRAG V +RWHE V+S+RFLWN SHVL QKPWYFMFTSSDEP+GYA+DP+ RKWY+IELPCI T NWFIASS G+VCFMDNDSRSEL +CNPITK  +KL+EP G+KFSDYSAL++SV+R SH Y+++IVKSKQVP NF QWD+SIH+Y+S    W T+LTEVL GWRGGDESVIC+G+LYFL+YSTG G PENRH+L+AYN+S+RSS    +   +P P  LTCGRLMNLK KLVMVGGIGKPDRPDIIKGIGIW+LN + W E+ RMPHKFFQGFGE DDVFASSG D+LIYIQSYGAPALL+FD + K WKWS KCPV+K+FPLQLFTGFCFEPRLEIAP
Sbjct:    1 MAGETSWISH-YDDRQRESGVFDSFLELGEEGDKDATAVSLDVILPDDLLERILAYLPIASIFRAGCVSKRWHESVNSERFLWNLSHVLPQKPWYFMFTSSDEPIGYAFDPVFRKWYSIELPCIGTSNWFIASSIGMVCFMDNDSRSELCICNPITKTYRKLEEPLGLKFSDYSALAISVNRESHIYSVAIVKSKQVPENFFQWDISIHVYNSVNTTWVTTLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQPENRHALIAYNMSNRSSQCSLTRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKRWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGAPALLIFDTSHKQWKWSQKCPVTKRFPLQLFTGFCFEPRLEIAP 404
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Match: A0A059CI46_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02335 PE=4 SV=1)

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 303/406 (74.63%), Postives = 343/406 (84.48%), Query Frame = -3 
Query:  563 IMEGETSWNSHCADDMSKDIGEFDSFSELSDEGNKE-TIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYTIELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXP--VPGPLTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1771
            +M+GETSW S C  D ++DI +++ FSELSDEGN+  + +S+D ILPDD+LERILA LP+ASIFRAGSVC+RW EIVSS+RFLWN S VLSQKPWYFMFTS+D+P GYAYDPILRKWY IELPC++T NWF ASSCGLV FMDNDSRSEL+VCNPITK  +KL EPPG+KFSDYSAL++S SR S+ Y ISIVKSKQ+PGNF+QWDLSIH+YDSE  MWATS TEV TGWR GDE VICDG+LYFLIYSTG    ENRH L+ Y+LS RSS  +       VP PLTCGRLMNLKG LVMVGGIGK DRPDIIKGIGIW+L G+ W E+ RMPHKFFQGFGELDDVFASSG D+LIYIQSYG+  LL+FDMN K WKWS KCPV+K+FPLQLFTGF FEPRLEIAP
Sbjct:    1 MMDGETSWVS-CNYDTARDIDDYELFSELSDEGNQAASAVSLDVILPDDILERILACLPVASIFRAGSVCKRWQEIVSSRRFLWNLSQVLSQKPWYFMFTSTDDPGGYAYDPILRKWYNIELPCLKTSNWFKASSCGLVSFMDNDSRSELYVCNPITKCSEKLAEPPGLKFSDYSALAMSTSRVSNGYQISIVKSKQIPGNFVQWDLSIHLYDSEARMWATSHTEVFTGWRAGDECVICDGILYFLIYSTGGSLLENRHGLIPYDLSGRSSHDLLINNSIPVPCPLTCGRLMNLKGNLVMVGGIGKQDRPDIIKGIGIWMLKGKEWQEIARMPHKFFQGFGELDDVFASSGMDDLIYIQSYGSSLLLLFDMNLKTWKWSPKCPVTKRFPLQLFTGFSFEPRLEIAP 405
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Match: I1NCH0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0
Identity = 296/407 (72.73%), Postives = 340/407 (83.54%), Query Frame = -3 
Query:  563 MEGETSWNSHCADDMSKDIGEFDSFSELSDEGNK-ETIISVDSILPDDLLERILAYLPIASIFRAGSVCRRWHEIVSSKRFLWNFSHVLSQKPWYFMFTSSDEPVGYAYDPILRKWYT--IELPCIQTPNWFIASSCGLVCFMDNDSRSELHVCNPITKICKKLQEPPGMKFSDYSALSLSVSRTSHNYTISIVKSKQVPGNFLQWDLSIHIYDSETMMWATSLTEVLTGWRGGDESVICDGVLYFLIYSTGVGTPENRHSLVAYNXXXXXXXXXXXXXPVPGP--LTCGRLMNLKGKLVMVGGIGKPDRPDIIKGIGIWVLNGRNWVEVGRMPHKFFQGFGELDDVFASSGTDNLIYIQSYGAPALLVFDMNQKLWKWSLKCPVSKKFPLQLFTGFCFEPRLEIAP 1768
            M GETSW SH  DD  ++ G FDSF EL +EG K  T +S+D +LPDDLLERILAYLPIASIFRAG V +RWHEIV+S+RF+WN SHVL QKPWYFMFTSSDEP GYA+DP+LRKWY   IELPCI T NWFIASS G+VCFMDNDSRSE+ +CNPITK  +KL+EPPG+K SDYSAL++SV+R SH YT++IVKSKQVP NF+QWD+SIH+Y+SE   W TSLTEVL GWRGG+ESVIC+G+L FL+YSTG G P NRH+L+AYN+S+ SS    +   +P P  LTCGRLMNLK KLVMVGGIGKPDRPDIIKGIGIW+L  + W E+ RMPHKFFQGFGE DDVFASSG D+LIYIQSYG PALL+FD+N K WKWS KCPV K+FPLQLFTGFCFE RLEIAP
Sbjct:    1 MAGETSWISH-YDDRQRETGAFDSFLELGEEGEKEATAVSLD-VLPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFVWNLSHVLPQKPWYFMFTSSDEPDGYAFDPVLRKWYRYRIELPCIGTSNWFIASSYGMVCFMDNDSRSEICICNPITKTYRKLEEPPGLKVSDYSALAISVNRESHCYTVAIVKSKQVPENFVQWDISIHLYNSENATWVTSLTEVLMGWRGGNESVICNGMLCFLVYSTGGGQPVNRHALIAYNMSNHSSQGSLTRNFIPVPFSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLKDKKWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGGPALLIFDVNHKQWKWSQKCPVGKRFPLQLFTGFCFEARLEIAP 405
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
FBK77_ARATH0.000e+064.73F-box/kelch-repeat protein At3g61590 OS=Arabidopsi... [more]
FK111_ARATH1.282e-2327.84F-box/kelch-repeat protein At5g15710 OS=Arabidopsi... [more]
FBX6_ARATH1.427e-1925.07F-box only protein 6 OS=Arabidopsis thaliana GN=FB... [more]
UFO_ARATH1.023e-1725.07Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thali... [more]
FBX13_ARATH1.780e-1125.79F-box only protein 13 OS=Arabidopsis thaliana GN=F... [more]
FB341_ARATH3.509e-925.35F-box protein At5g49610 OS=Arabidopsis thaliana GN... [more]
FB204_ARATH2.062e-724.64F-box protein At3g56470 OS=Arabidopsis thaliana GN... [more]
FK117_ARATH3.308e-732.94F-box/kelch-repeat protein At5g42350 OS=Arabidopsi... [more]
FK118_ARATH3.424e-732.94F-box/kelch-repeat protein At5g42360 OS=Arabidopsi... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0094222 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1JRW3_SOYBN0.000e+075.06Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RQJ7_GLYSO0.000e+075.06F-box/kelch-repeat protein OS=Glycine soja GN=glys... [more]
V7BRP3_PHAVU0.000e+074.07Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A059CI46_EUCGR0.000e+074.63Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
I1NCH0_SOYBN0.000e+072.73Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 80..120
e-value: 4.8E-10
score: 49.4
IPR001810F-box domainPFAMPF12937F-box-likecoord: 80..119
e-value: 2.3E-10
score: 40.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 80..121
score: 11.855
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 78..179
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 178..368
e-value: 4.0E-4
score: 18.8
NoneNo IPR availableGENE3D1.20.1280.50coord: 79..118
e-value: 4.1E-13
score: 48.3
NoneNo IPR availablePANTHERPTHR10706F-BOX FAMILY PROTEINcoord: 74..437
NoneNo IPR availablePANTHERPTHR10706:SF127SUBFAMILY NOT NAMEDcoord: 74..437
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 134..414

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094222 ID=g.barbadense_cottongen_reftransV1_0094222; Name=g.barbadense_cottongen_reftransV1_0094222; organism=Gossypium barbadense; type=contig; length=1911bp
GTTCTTCTCCTTTCTCAATACTCAATTACTAATATCTATTCTTCACTTCT
TCCATTTCAACACTCTCAAACTATATTCTAATTTTGAGGTTGTGTACTGA
TGTAAACACAAAAAACAAAACATATTGTGGGGAGTTGTTCATATTACATG
TTTTTTGGGTTTTCTTGAAAGCTTTGTCTTGTTGGGTTTTGTGTTTTGTT
TTTGGATGGGAACTGAGAGAAGTGAAGAAACTGTGTTGAAGAAACAGAAG
AAATATAATGTTGGGGAAAGTGAGAGAGGGCAATGGTTGTTGTTGTGCAG
TTGTAAATTTCTACAACCTTGTACAAGTTGGTCTTGTTTTAGACAAGGGT
GTTACTCTTTTTACAAGTGATACTACAGCCATCTTGCATCTCTTAAATCT
TGTATAAAAACAAAACATCTGTCCCAGAACAATACACAATTAAGGCTCTC
TCTCTTTTTTCTTTTTCTTTTCTTAGGGTTGGGGGGAACTGAGATATCTA
TCATATCATATGATGATCATAATGACATAAAAGAAAATCTGGGATGTTCA
TAAATAAGATCATGGAGCAATTTCAAGCCTTGGTTCAAAGCAAAAGCCAG
TGAAGAGCTGAAGAGGGAATTTCTTTGAGACCGGACACTTGAGCGACCAT
TTCCATAGTTTCTGGTTCATGTCGAAAACAAGAAGAGCTGGGGCACCGTA
GCTTTGGATGTATATGAGGTTATCAGTACCACTACTAGCAAAAACATCAT
CCAACTCACCAAATCCTTGGAAGAACTTATGGGGCATGCGACCGACTTCT
ACCCAATTCCTCCCGTTAAGAACCCAGATTCCAATGCCCTTGATTATATC
GGGTCGATCTGGCTTCCCGATTCCTCCCACCATTACCAGCTTCCCCTTGA
GGTTCATCAAACGACCACAGGTAAGCGGGCCTGGTACTGGAATAAGGCTC
CGTATCAATGGGGATGATCGACTAGAGAGATTATATGCAACAAGGCTGTG
ACGGTTTTCTGGTGTACCAACCCCGGTTGAGTAAATCAGAAAGTATAAAA
CCCCATCACAGATCACACTTTCATCTCCACCTCTCCATCCTGTTAAAACC
TCAGTCAAGGAGGTTGCCCACATCATTGTTTCTGAATCATAAATGTGTAT
CGAAAGGTCCCATTGGAGAAAGTTTCCGGGGACTTGTTTAGATTTCACAA
TGGATATCGTATAATTGTGAGACGTCCTGCTAACCGAGAGTGACAGTGCA
CTATAGTCAGAGAATTTCATACCAGGGGGCTCCTGAAGCTTCTTGCAAAT
CTTGGTAATCGGATTGCATACATGCAACTCGCTTCTACTGTCATTGTCCA
TGAAACAAACCAATCCACACGATGAAGCAATAAACCAGTTTGGAGTCTGA
ATGCATGGAAGTTCGATGGTGTACCATTTACGGAGGATCGGGTCATAGGC
ATAACCAACTGGTTCATCAGAACTTGTGAACATGAAATACCAAGGCTTTT
GTGATAGGACATGCGAAAAATTCCATAAAAATCTTTTGGAACTGACAATC
TCATGCCATCTTCTACACACAGAACCAGCTCTGAAAATGCTAGCAATGGG
AAGATAAGCCAAAATTCGTTCCAACAAGTCATCGGGTAGGATCGAGTCTA
CAGAAATGATCGTTTCTTTATTACCTTCATCACTAAGTTCCGAGAATGAA
TCAAACTCACCGATGTCTTTAGACATGTCATCAGCGCAATGGCTGTTCCA
AGAAGTCTCTCCTTCCATGATAAACAACACTTGAAGAAAATTCCTGTAAT
GGAAGTGGTTCAAGGATAAGTGAACCAATGGGTGGTGGTAGATTCGAACA
AAGTATCGAGATTTAACAAAAACCAAGGGAAACTAAGAAAAGGAGCAAAG
GTTCAGACTTC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR015915Kelch-typ_b-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding