g.barbadense_cottongen_reftransV1_0094142, g.barbadense_cottongen_reftransV1_0094142 (contig) Gossypium barbadense
|
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 8.608e-56 Identity = 138/537 (25.70%), Postives = 245/537 (45.62%), Query Frame = -2
Query: 2013 LVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAF 3623
++ C + AF K++ + +N L++GLC + + EA+++ D M E PTL +L GLC G V +A L +M GF ++ Y ++NV CK + +A+ + +M + + D+ Y+ +I G K G D + LFN+M +G + ++T++ +I +C G+ D + LL +MI + ++PN ++VLI S KE ++ EA++ + M+ G+ P+ + + L+ + K L+ A ++ + GC DP ++ FN+LI+ C+ + D +M G + TYN+L++ Q G E A+ L M ++ + PD + I+++ C +G LE A +I ++E M+ + IY II + KV +A +F + GV D Y MI+ + +AD LF +M P +Y LI + + +E+M G P V ++ N L E + +F
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK-PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC--DPDIM-----------------------------TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSF 632 HSP 2 Score: 186.422 bits (472), Expect = 1.711e-47 Identity = 126/483 (26.09%), Postives = 218/483 (45.13%), Query Frame = -2
Query: 1287 EILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLL 2735
+I+K V FN L++ LC + + A +D+M +G P L T N+L+ L G DA L++RM G P++ T ++N CK G A ++L +ME+R +K Y+ II L + + A +F M G D I Y T+I GF N GR + +L +MI I P +++ LI VK+ + L++M+ G+ PN + Y SLI F ++ E A ++VDLM + D++ + L++G+ ++ R+ D L+L +++ + N YN ++ GFC++ +++ A F+ M V P+ V++ IL+ G GE++ A+ +F K+ D +Y I+++G+C AS++ +A L + +G+ Y I++ C A +F +M P N L+
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN------------------------------------RIDD---------GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585 HSP 3 Score: 180.259 bits (456), Expect = 1.810e-45 Identity = 136/601 (22.63%), Postives = 262/601 (43.59%), Query Frame = -2
Query: 1368 LFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV------SDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3152
LF M++ P+V+ F+ + S + + + L M SK +A + + +++I + +++ A +++ G PD V+F L LNG L L +E LE L++ +++ + N L++ LC + A +D+M G P TY ++ + + G A LL +M+ + I D III+ CK G+L+ AF++ ++ME +G K + YN +IG + + + M++ + P+ + + +I+ F G++ EAD+L EM+ I P + +Y +LI G K+N ++ ++ M+ G P+ + + LI+ + + + L M + + + Y +LV GF +S G +KLFQ + + + P + ++ + E AL++ K+++++ ++ +Y +II G C A ++ DA+D F + +GV + + I++ + + A LF KM +G PD + Y IL+ A L+ M G T ++++ L
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL---------------------LNG-----LCLECRVSEALE-----LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS------------GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK----ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628 HSP 4 Score: 177.948 bits (450), Expect = 9.979e-45 Identity = 133/533 (24.95%), Postives = 248/533 (46.53%), Query Frame = -2
Query: 1176 LISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGF-----------------YRSISSRKRWFAM------RRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFM------PNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKT 2687
L S L D+ F D ++S +P + +N L +++ +E +L +M+++GI T I+IN C+ L AF + ++ G +P I+N ++ L + +VSEA + RM+E G P I T++NG NG+V +A L M+ +P +Y +++ + K T L KM + + +AV Y+ +I + + AF L + M+ + D+I Y +L+ GF R IS F++ + G R ++L + + ++ + P N +S + C +L + ++ M P++ +N++I+G+C+A+R+ D + F M GV+ N VT+ L+ G ++G+++ A LF +M + PD + YKIL++GLC L +AL + + K + G Y II+ C++ A+ +F + + N ++ LC + L +A I++ + + G P + T ++ I+
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP---NTITYNSLIDGF-CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587 HSP 5 Score: 174.096 bits (440), Expect = 1.644e-43 Identity = 132/609 (21.67%), Postives = 252/609 (41.38%), Query Frame = -2
Query: 1488 YTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGL 3314
+ L + K ++ ++ L + +M G YT + +I+ F + Y + ++M+ G +P V F+ +++ C E +V A L++ M+ P L+ L ++++A +RM+ G P+ V + ++ + K + +A +L+ ++E++ N+ L V ++++I LC+ D+A ++ME G + TYN+LI G ++D LL M + I P+ T ++I+ K G L A +L +M RG+ P YN +I ++ ++ EA M M+ G DPD + + +ING+ R+ + LF EM + + +Y L+ G + + ++M+ + P+ V Y L+ E E A + ++++++E D+ Y+ ++ G + W LF LP +K + Y N++IS C D + A F M +EG P+++T+ IL+ H+ + A L +M + G D K+++N L
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR--------------------KMEER-----------NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW------------DLF------CSLP-------------------------LKGVKLDARAY--NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623 HSP 6 Score: 127.487 bits (319), Expect = 1.132e-28 Identity = 95/385 (24.68%), Postives = 172/385 (44.68%), Query Frame = -2
Query: 2871 SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL-LTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREG-----------------------------------KVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMY 3917
+ VSDA+ +D + G + TY ++ + +SG LA + R I D+ + I+ LCK G L+ A LF+ + + + +N L+ C+ R+ D MI ++ ++VLID ++G L EA Q+ M +R + P Y SL G CK+ + EA + M S+G D + LIN YCK ++ L ++ M G ++ TYNTL+ GF + G + LF +M+ + ++P +V++ +++ C G KVD A L ++ K + +A Y ++I+ L +++ +++A+ + +M G PD + + L++ +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK-MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA-PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588 HSP 7 Score: 104.76 bits (260), Expect = 2.003e-21 Identity = 86/364 (23.63%), Postives = 162/364 (44.51%), Query Frame = -2
Query: 1167 EADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAR--EKLFQLLHRQSLLPKEK-------NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 2231
+A LF +MI + PT + L S + K + ++M G+ + + +I+ F + R+ +AF + + + E D + + +L++G R SE +++ ++ H+ +L+ N +VSD A+ LI ++ +T F PN Y +++ C++ + A + M++ + + V ++I++ G K G +D+A LFN+M G D I Y L+ G C A R + LL M KR + P+ T+ +++ F A ++ +EM+ P N L+ C + +L EA + D +I +G P T ++ I + K
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC----------RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD---------AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415 HSP 8 Score: 66.6254 bits (161), Expect = 1.311e-9 Identity = 53/213 (24.88%), Postives = 95/213 (44.60%), Query Frame = -2
Query: 3282 SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKG 3917
++ + D L ++ RG+ + TY L++ QSG L +A + + ++ R + PD ++ LC G+LE+A +F ++ + + ++ +C+ + DA+D F + V L YN++I LC+K L +A +F M E + P Y L A L +M+S GF D + +IN+ G
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE-MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP444_ARATH (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.423e-55 Identity = 164/668 (24.55%), Postives = 292/668 (43.71%), Query Frame = -2
Query: 1488 AIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKM-GCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRM-QAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEK--NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGL 3479
++++F + + +Y+ L L G + L +M+ +G ++++ S++ Y K R+ M + C P +YN ++ V +F M+ + + P++ TF V++ +C ++D A LL +M PN+ Y LI SL K NR+ EA + E M G VPD F + L C FD + NE + ++ +L + + L++ LC+ + D+A ++ P + +N+LI G +DA+++L+ M + GI PD T +I + K G + A ++L M ++G KP V Y ++ + K+ EA + M G+ P+ + + +I+ F R+ EA +F EM +P +++ +LISGL + + L M+ +G+V N V Y +LI+ FL++ E + A +LV+ M D I Y SL+ G R+ G LF+ + R P N+ ++ M A++ +++ P++ +N +I+G C A R++D F +Q EG+ P+ VTF LM K G + A L ++ DG P+ + IL+ +
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF--------------------NDVILGLCKFDRI------NEAAK-----MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA------------GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714 HSP 2 Score: 199.519 bits (506), Expect = 2.205e-51 Identity = 135/510 (26.47%), Postives = 234/510 (45.88%), Query Frame = -2
Query: 2124 AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQ-GLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGC-----GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDK 3635
F +++ C+ A M Y LI L + + EA+Q+ + M +P + + GLCK + EA + +M +GF D Y L+N CK ++ A ++YR+ K P+ +NTLIHGFV G D + + M+ G+ P V T++ +I Y +EG V A +L++M +K PN + YT+L+ K +I EA M GL P+ V F L+ + K + + A + + + GC F+ L+ + +E++ + L+ +++ + V +N LI+A + + A +++M G TYNSLIK L + G + A SL +M G P +C I+IN C+ G +E A + +M RG P + +N +I L R ++ + MF ++ G+ PD + + T+++ G V +A L E I P +++ L+ ++ + D+
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM-FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL-WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722 HSP 3 Score: 185.652 bits (470), Expect = 5.048e-47 Identity = 159/612 (25.98%), Postives = 271/612 (44.28%), Query Frame = -2
Query: 2049 TSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP--AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMI-SKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLIS 3875
+ G Y VLI KL +G + GI+ S+ SI+ K G + T L + SCE ++N ++ +L S A + F M++ + + + V++ C ++ A+ + M + +P +Y++L + L K V EA L +M G D + +I CK ++ A ++ RML G PD TY L++G K+G D LF ++ +P +V F+ +I + G++D A +L++M+ S + P+ Y LI +KE + A E M N G P+ + L+ + K ++D A+ VL ++ +G LK N V FN LISA C++ + A +M GC P ++T+NSLI L + + A LL M ++G+ + T +IN + G ++ A ++++M +G YN +I L R +V +A ++F +ML G P I +ING +G V EA EM+ P ++ +LI+GL + + G T K+ +G+ P+ V + +L+S
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ-MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG---------------------------LKPN----TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677 HSP 4 Score: 182.185 bits (461), Expect = 7.938e-46 Identity = 151/620 (24.35%), Postives = 266/620 (42.90%), Query Frame = -2
Query: 1164 YTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPK-GYELDIAFMVLKAIALNGCGFDP------LLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGA-AIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW 2999
Y VLI L + +M + G+V LF +M+ Y K G+ ++L+ + C +P ++L + + + + ++L + F V++ A C + DSA + M GC+P Y +LI LS+ +A LL M G PD T +I CK + A ++++M RG P Y ++ L + +V A +F R+ + P+ +I+ T+I+GF +GR+ +A + +M+ + I P +Y +LI G K+ + L M + G PN YT L+ F + + + A+ +++ M + ++ + + + L+S F + HR PEA++ F +++ + P++Y +N +ISG CE D ++ A M EGV+ N VT+ L+ ++ GEI A L N+M G D I Y L+ GLC+A + +A SL M + G PS + I++ C S + A + +EMV+ P + N L+ LC ++ + ++ + G P ++ T W
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSC--EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE-------------------------HR---------------IPEAVEIF-----REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG----IPPDTVTFNTLMSW 678
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP103_ARATH (Pentatricopeptide repeat-containing protein At1g64100 OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 2.581e-55 Identity = 140/535 (26.17%), Postives = 239/535 (44.67%), Query Frame = -2
Query: 2073 AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERT--ESL------------PTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNA 3635
+FN L++ C + + F K+ + +N L+ GLC + + EA+ +F M E E++ P + + +L GLC +G V+EA +L KM +G +D Y +++N CK K AL + +M + +PD Y+ +I K G LF++M+E+G+ P+V T++ MI +C G+ A LL +MI + + P+ + LI++ KE ++ EAE+ + ML+ + PD V + ++ + K D A + FD + P V FN +I C + D + ++ G + TYN+LI + A+ L M + G+ PD TC I++ C++ LE A ++ + ++ + YN II + + KV EA +F + GV+PD Y MI+GF + +A+ LFH+M P + +Y LI G +K DK + +M +G +A
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM----------FDLMASP-------------------------DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642 HSP 2 Score: 192.586 bits (488), Expect = 2.229e-49 Identity = 129/471 (27.39%), Postives = 220/471 (46.71%), Query Frame = -2
Query: 1335 VAFNVLISALC-EQAQQDSASYF--------------MDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 2702
V FN L+ LC E ++ + F D+M +G P++ T+N+LI L +G +A +L+N+M +G+ D T I+N CK G+ + A ++L +ME+ +KP V IY+ II L + S+A +F MLE G+ P+ Y MI+GF + GR +A RL +MI I P ++ ALIS VK+ + ++ML + P+ V Y S+I F + F+ A + DLM D++ + +++ + R ++R E ++L++++ + + N YN +I GFCE D + A D F+ M GV P+ +T IL+ G + +++ A+ LF + D + Y I+++G+C+ S++ EA L + G+ P TY +++ FC A +F +M
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR--------------AKRVDE-------------------------------GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598 HSP 3 Score: 169.088 bits (427), Expect = 7.838e-42 Identity = 134/616 (21.75%), Postives = 264/616 (42.86%), Query Frame = -2
Query: 1368 NTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV---SDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3206
N +I FV+M D L+ +M + + ++ +F+++I +C K+ + + P+ + L+ L E+RI+EA + M+ G + LF +++++ G P++ + FN LI+ LC + + A+ ++KM G + TY +++ + + G + A +LL++M+ I PD II+ CK G+ A + +M ++G+ P V YNC+I + S+A + M+E ++PD + + +I+ G++ EA++L EM+ I P + +Y ++I G K N D + M D P+ V + ++I + + + + +L+ + R + + Y +L+ GF + A + LFQ + + P + E ++ AL+L + ++ ++ + YN+II G C+ ++ +A+D F + GV P+ T+ +++ G I A LF+KM +G PD Y L+ G +A + +++ L+ M G T +++ D L
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI----------------------GLTPVV-----------------------------ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV------------DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE-EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657 HSP 4 Score: 149.828 bits (377), Expect = 1.035e-35 Identity = 119/514 (23.15%), Postives = 212/514 (41.25%), Query Frame = -2
Query: 1179 AFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLF-QLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFM------PNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIK 2699
+FN+LI C+ + + K+ LG P + T+N+L+ L + +A +L M G A + DQM + G+ P V +N +I L + +V EA A+ +M+ G+ D + Y T++NG G A L +M I+P Y+A+I L K +ML+ G+ PN Y +I F + A RL+ M +I D++ + +L+S +++ G EKL ++LHR + P D+ + + + M P++ +N II +C A R+ + + + G++ N T+ L+ G + ++ A LF +M + G PD I IL+ G C+ +L EAL L V+ + Y II+ C A+ +F + ++ P + N ++ C + + +A +++ + G P T + I+
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE--------------------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA------------SVKEGKLFEAEKLCDEMLHR-CIFP--------DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615 HSP 5 Score: 126.331 bits (316), Expect = 3.338e-28 Identity = 98/411 (23.84%), Postives = 177/411 (43.07%), Query Frame = -2
Query: 2772 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP-AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMES-------------------------------QGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSAN 3908
V +A + V+ + +GL +D+ TY ++ + + G A + S + I PD I ++I+ LCK G +A LF +L +N ++ CS R+ DA MI +N +N LI ++G L EA ++ D M R P Y S+ YG CK +A+ +F M S +G + T Y +LI+ +C+ + A ++ M+ G PD+ T N L++GF + + LF + + V ++++I C+ KVD A L ++ + P+ Y V+I+ ++ I++A + +M + G PD+ + L++ K E+D + ++ + NG D + + A+
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK-MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650 HSP 6 Score: 79.7221 bits (195), Expect = 1.302e-13 Identity = 59/228 (25.88%), Postives = 105/228 (46.05%), Query Frame = -2
Query: 1143 ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGG----------------HIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSA 1778
A+ L +K++ R N+Y +N++I FC+ ++ + F + K G P+ VTF L+ G ++ G ++ A+ LF++M G TP I + L+NGLC R+LEA +L++ M +GL TY I+ C A + +M P + + ++ LC +A ++ ++++G P T + I F + RW+ A
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF-GRWSDA 350 HSP 7 Score: 75.485 bits (184), Expect = 2.657e-12 Identity = 50/204 (24.51%), Postives = 94/204 (46.08%), Query Frame = -2
Query: 1167 ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 1778
A+ L ++ + P + +N +I+G C R+ +A M +G+ + VT+ ++ G K G+ A+ L +KM PD ++Y +++ LC+ +A L M ++G+ P+ TY ++ FC A ++ +M+ P + N L+ + KL EA + D ++ R +P T + I F K
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR99_ARATH (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 4.332e-55 Identity = 149/612 (24.35%), Postives = 267/612 (43.63%), Query Frame = -2
Query: 1539 EAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNA 3374
+A +LFG M F ++ L++ K K + + + +M +G + YTY+ LI+ F + + +MM+ G +P +VT + +++ +C ++ A L+ M+ P++ + LI L++ NR +EA +RM+ G PD V + ++ K ++D+A +LK + ++E +VI +N +I ALC + A +M++ G P + TYNSLI+CL G + DA LL+ M + I P+ T +I+ K G L A + D+M R + P + Y+ +I ++ EA MF M+ P+ + Y T+I GF RV E LF EM + + +YT LI G + D ++M+ DG++P+ + Y+ L+ + E A + + + R+++E D+ Y ++ G ++ W LF L +LK ++ PN+ Y ++SGFC ++A F M++EG LP+ T+ L+ H++ G+ + L +M +
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME---------------QGKIEPGVVI----------------YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW------------DLFCSL-------------------------SLKGVK--------PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599 HSP 2 Score: 208.379 bits (529), Expect = 9.212e-55 Identity = 142/601 (23.63%), Postives = 270/601 (44.93%), Query Frame = -2
Query: 1368 LFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV------SDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3152
LF M++ PS+V F ++S + K D L M + ++ N + Y++LI + ++++ A +M+ G PD V L+ + G + A V L+ ++++ FN LI L + A +D+M GC P L TY ++ L ++G + A SLL +M+ I P II+ C + N+ A ++ +M+++G++P V YN +I L + S+A+ + M+E ++P+ + + +I+ F G+++EA++L+ EMI +I P +Y++LI+G + D+ E M+ PN V Y +LI F + + + L M + + + + Y +L+ GF+++ R + A + +F+ + +LP + ++ E AL + + +++++ P++Y YN++I G C+A +++D +D F + +GV PN VT+T +M G + G + A LF +M +G PD Y L+ + + L+ M + T ++ D L
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA-------------------------------VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA-----------RECDNA-QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET----ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRL 621 HSP 3 Score: 198.749 bits (504), Expect = 1.421e-51 Identity = 139/544 (25.55%), Postives = 247/544 (45.40%), Query Frame = -2
Query: 1140 VILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKE-------KNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 2750
V L +++KS + V F+ L+SA+ + + D ++M++LG L+TY+ LI C ++ A ++L +M G PD T ++N C + A ++ QM + G +P +N +I LFR + SEA A+ RM+ G PD + Y ++NG G + A L +M I P Y +I L + +M + G+ PN V Y SLI + A RL+ M +I +++ + +L+ F ++ G EKL+ + ++S+ P + D EA F L + + PN+ YN +I GFC+A R+ + + F M + G++ N VT+T L+ G +A E D+A +F +M +DG PD + Y IL++GLC ++ AL + + + + P TY I+++ C + + +F + + P + ++ C + EA ++ + + G P T + I+ + ++ SA+
Sbjct: 66 VNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF------------VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-----FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592 HSP 4 Score: 186.037 bits (471), Expect = 2.008e-47 Identity = 116/466 (24.89%), Postives = 214/466 (45.92%), Query Frame = -2
Query: 2034 TLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQK 3431
L+ Y L C++ + A ++ KM G+ D SL+N +C G ++ A+ + +M++MG +PDS+T+NTLIHG + L ++M+ +G QP +VT+ ++++ C+ G +D A LL M + P Y +I +L + +A + M N G+ P+ V + L++ C + + + + +IE + N+ V F+ LI A ++ + A D+M P +FTY+SLI ++A+ + M ++ FP+ T +I CK ++ ++ +M RG+ Y +I F+ ++ A +F +M+ GV PD + Y +++G NNG+V A +F + + + P ++Y +I G+ K + G + G+ PN V YT+++S F +K
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL--------------------CNYGRW-------SDASRLLSDMIERKINPNV----VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549 HSP 5 Score: 183.341 bits (464), Expect = 1.752e-46 Identity = 137/510 (26.86%), Postives = 225/510 (44.12%), Query Frame = -2
Query: 2205 SIVI-CLCKLGKLEEATILFDRLLT-DNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEM 3728
SI+I C C+ +L A + +++ + N+L+ C R DA +M+ + + +N LI GL + EA+ + D M + P L Y + GLCK+G + A SL KME +Y ++I+ C + + AL ++ M G RP+ TYN+LI G + L + M+E+ + P+VVTF +I + +EGK+ A L + MI +++ P+ Y+ LI +R+ EA+ +E M++ P+ V + L+K + K +D E +E L E+ + L V + LI + + D+A +M S G +P + TY+ L+ L G E A + +Q + PD T I+I CK G +E +D+ + +G+KP V Y ++ R+ EA A+F M E G PD Y T+I +G + L EM
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD--------------------------EGME-----LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597 HSP 6 Score: 157.918 bits (398), Expect = 1.890e-38 Identity = 111/485 (22.89%), Postives = 219/485 (45.15%), Query Frame = -2
Query: 1173 FEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGF--YRSISSRKRWFA-MRRGSERAREKLFQLLHR---------------QSLLPKEKNLRVSDSSP-------EAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 2552
+DA +L M FP +++ K + + +QM++ G+ + Y+ +I R+ ++S A A+ +M++ G +PD + +++NGF + R+ +A L +M+ +P S ++ LI GL + N + +++M+ G P+ V Y +++ ++ + + A L+ M++ +IE ++ Y +++ Y++++ F M R + L R ++ ++ N V S E A KL ++ + P+++ Y+ +I+GFC DR+ +A FELM + PN VT+ L+ G KA +D + LF +M+ G + + Y L++G QA A + M G++P TY I+L C++ A +FE + P +Y N ++ +C K+ + ++ S+ +G P T + + F
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546 HSP 7 Score: 59.6918 bits (143), Expect = 1.745e-7 Identity = 45/159 (28.30%), Postives = 70/159 (44.03%), Query Frame = -2
Query: 1209 RMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 1685
++ DA + F M K P+ V F+ L+ K + D I L +M G + + Y IL+N C+ S+L AL++L M K G P T +L FC A + +MV P + N L+ L + EA + D ++ +G P
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.925e-54 Identity = 166/682 (24.34%), Postives = 292/682 (42.82%), Query Frame = -2
Query: 1383 DKTMYTSLINV----YCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLP-------VSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQ------DSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKML----------------DDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHR-QSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYF 3326
DK ++ +NV +C+ +AL R+ RP TYN LI F+K D ++ +M L+ T + C+ GK A L+ ++N P+ YT LI+ L + + EA +F RM +P+ V + L+ +L VL + + GC P + S + K L+++++K V +N+LI ++C D A +M + G + +S +CL G +E A S++ M QG PD +T ++N C +E AF + ++M+ G+ V Y ++ S + + +A F M E G P+ + Y +I+ + +V A+ LF M+ P +Y+ALI G K +K C E+M D+ PN V Y +L+ F + E A +L+D M E + I Y +L+ G + K A +E + L+ SL+ + ++ D A K++ K+ + PN+ +Y +I G C+ + +AY ++M+++G PN VT+T ++ G G+I+ + L +M + G P+ + Y++L++ C+ L A +LL M + Y +++ F
Sbjct: 195 DKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK---LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV---GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD--------LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859 HSP 2 Score: 209.149 bits (531), Expect = 1.088e-53 Identity = 171/828 (20.65%), Postives = 332/828 (40.10%), Query Frame = -2
Query: 1230 KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGK------VDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQM----------------EDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLH--VMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSI 3641
+ +N L++ +R A +M N+ + + LC+ G EA+ + E +P Y L GLC+ EA +M + + Y++L+ +++ RV M+ GC P +N+L+H + G Y + L +M++ G P V ++++I + C + +D A + M++ + N + L + +A M+ G +PD + K++ ++++AF+ L EE+ + L + +++ + C+ + A + ++M +GC P + TY +LI + A L M ++G P+ T +I+ HCK G +E A I ++M +D +P V Y ++ + +V EA + M G +P++I+Y +I+G G++ EA + EM T ++Y++LI K D L KML++ PN V+YT +I + + + A++L+ +M+ + +++ Y +++ GF ++ K + L+L++++ PN Y V+I C+ + A++ E M++ + + ++ G K E ++GL +++ D P VY++L++ L +A RL AL LL L+ TY +++ C + AF++F EM P++ L+ L K+ EA ++ D I
Sbjct: 235 RSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV----ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL-------------------------------LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF-------------------------------GMIGKIET--------------CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980 HSP 3 Score: 180.644 bits (457), Expect = 1.174e-44 Identity = 153/641 (23.87%), Postives = 264/641 (41.19%), Query Frame = -2
Query: 1995 LIKKLVQSGHLP-------------------------LAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSC-EKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEM--IGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLM 3833
L+KK+V+ GH+P LA YS+ ++ G++ + +S CLC GK E+A + ++ + ++ ++ LC+ + AF F +M + + Y +++D C+ G +E+A + F+ M E P + Y +L + K V A LF M S+G + Y++LI+ +CK +++ A +++ RM PD Y F Q + +P+VVT+ ++ +C+ +V+ A LL+ M + PN Y LI L K ++ EA+E M G + L+ Y K D+A VL + N C +VI E +I LC+ + D A M ME GC P + TY ++I G E LL RM ++G+ P+ T ++I+ CK+G L+ A ++L++M+ A Y +I K+ E+ + + + P +Y +I+ R+ A RL E+ A + S +Y +LI L N + +M G++P + SLI + + A L+D +
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE-MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE-VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA---------------PNVVIYTE----------------MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980 HSP 4 Score: 146.747 bits (369), Expect = 3.592e-34 Identity = 134/555 (24.14%), Postives = 229/555 (41.26%), Query Frame = -2
Query: 2331 FQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP--AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMP---------------ERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQ--AQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEA 3938
F R + ++ A S + + +G D STY+ ++ L + + LA+ + + G G++ D +V CK G +E+A F+ + + C + AL+ ++ A + F M++ Y+ LIDG C+ G +E+A Q+F+ M + P + Y +L G CK V EA L M +G ++ +Y +LI+ CK K+ A V M + G YTY++LI + K+ D + ++M+E P+VV + MI C+ GK D A L+ M K PN YT +I +I E ERM + G+ P++V + L+ K LD+A L+EE+ +++ + +I ++ + +D++ P L Y LI L + E A LL + + + +T +I C +E AF + +M +G+ P + + +I LFR K+SEA
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHN-------------------------------LLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973 HSP 5 Score: 120.939 bits (302), Expect = 3.313e-26 Identity = 117/513 (22.81%), Postives = 206/513 (40.16%), Query Frame = -2
Query: 1218 FNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIE---RDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQ-LLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKG----------------TYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRG 2696
NVL+ C A + +++ P TYN LI+ + + A + M + D T CK G A ++ E P Y +I L EA RM + P+ + Y T++ G N ++ R+ + M+ P+ + +L+ L+KM+ G +P V+Y LI + ++ L+DL ++ E ++ VS F R + S ++ + RE + Q + S K N + S E A L +++K+ + ++Y Y +++ FC+A ++ A F M++ G PN VT+T L+ ++KA ++ +A LF M ++GC P+ + Y L++G C+A ++ +A + M +P TY +L FC S+ A K+ + M + P + L+ LC KL EA V + + G
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD-SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY---EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME----LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704 HSP 6 Score: 112.464 bits (280), Expect = 1.592e-23 Identity = 98/439 (22.32%), Postives = 178/439 (40.55%), Query Frame = -2
Query: 1182 IIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFC------EADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFI 2480
+++ +HC++G+ A + L +++D +P + YNC+I + + ++ A+ + M + + D G+ EA L P + YT LISGL + ++ ++ +L +M +PN V Y++L+ L K++ R++++M ++ G Y S PK N V +A KL++K+ + MP +YN++I C D + A + M GV+ N++ + AG+ + A + +M G PD Y ++N LC AS++ A L M + GL+ TY I++ FC + L A K F EM P + L+ +K+ A ++++++ G P T S I
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM--------------MMEGCYPS-------------------------------PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595 HSP 7 Score: 68.1662 bits (165), Expect = 6.167e-10 Identity = 67/291 (23.02%), Postives = 111/291 (38.14%), Query Frame = -2
Query: 1164 LLHRQSLLPKEKNLRVSDSSPEAMKCFALKL---------IQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFC------------------DSYLAV-----------------------PAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF---------RKW 1859
L+HR+ L NLR+ + ++CFA L + V+ F+P+ Y +ISG CEA ++A D M+ LPN VT++ L+ G + ++ + N M +GC P ++ LV+ C + A LL M K G +P Y I++ C LA AF + EM+ P + +L LC K+ A ++++ + + G T ++ + +F RKW
Sbjct: 256 LIHREMSLA---NLRMDGFT---LRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A0B0MFC3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22354 PE=4 SV=1) HSP 1 Score: 1873.98 bits (4853), Expect = 0.000e+0 Identity = 909/932 (97.53%), Postives = 918/932 (98.50%), Query Frame = -2
Query: 1335 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 4130
MTNKRVLSRHLFFK+RRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHL LAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL+TDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLC+QGWVVEAESLFGK+ESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLK GCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMM QGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNL PAFDILDQMEDRGMKPGVAIY+CII SLFR+KKVSEA MFVRML+SGVDPDEIIYLTMINGFSNNGRVIEA RLFHEMI AAIRPTSHSYTALISGLVKK+MTDKGC YLEKMLDDGLVPNAVLYTSLI+NFLQK EFEFAFRLVDLMDRNQIE DLI YISLVS FYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM
Sbjct: 1 MTNKRVLSRHLFFKTRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLLLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNFLQKGEFEFAFRLVDLMDRNQIELDLISYISLVSRFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 932 HSP 2 Score: 190.66 bits (483), Expect = 6.799e-46 Identity = 163/670 (24.33%), Postives = 299/670 (44.63%), Query Frame = -2
Query: 1173 QMMEQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERD-LIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3143
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +NVLI LC++ + A D M E +P L Y SL L ++G +AESL ++++QG F D+ +IN +CK ++ A + +M G +P YN +I + +F +M+ G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K+N + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + A + K++ MP L+ YN +I + +DA MQ +G+ P+Q T I++ H K G + A + ++M G P +Y ++ L + ++ EA + M K G+ P + Y ++ F ++ + A ++F EM+ + P + L+ L + + C+ + ++ G P + I F
Sbjct: 51 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLLLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNF 696 HSP 3 Score: 170.629 bits (431), Expect = 1.223e-39 Identity = 157/662 (23.72%), Postives = 285/662 (43.05%), Query Frame = -2
Query: 2067 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVL 3980
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +NVLI LC++ + A D M E +P L Y SL L ++G +AESL +M++QG F D+ +IN +CK + A + +M G +P Y+ +I + +F +M++ G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K++ + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + A + K++ MP L+ YN +II+ C+ ++ A+D + M+ G+ P + ++G + ++ A +F +M G PD I+Y ++NG R++EA L H M + P+ +Y ++ + E+M DGL A+L
Sbjct: 330 QMMGQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNFLQKGEFEFAFRLVDLMDRNQIELD-LISYISLVSRFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYN-----------------------------------VIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM-QDGLQLTAML 942 HSP 4 Score: 102.064 bits (253), Expect = 1.742e-18 Identity = 63/120 (52.50%), Postives = 64/120 (53.33%), Query Frame = -3
Query: 800 KDGLQLTAMLVLNY*SLSSVGFKNKERKISWLDASGVLLKTCQKVFFHKYRMRCCLCPEKSREKFKL*ADIRVCTSVL*VFQILQIPGSIELTGIKIKCSTNFPVFFQLVIWPNLMEKLI 1159
+DGLQLTAML RKISWLDASGVLLKTCQK ILQIPGSIELTGIKIKC TNFPVF QLVIWPNLMEKLI
Sbjct: 933 QDGLQLTAML----------------RKISWLDASGVLLKTCQK--------------------------------------ILQIPGSIELTGIKIKCYTNFPVFLQLVIWPNLMEKLI 998 HSP 5 Score: 65.855 bits (159), Expect = 2.651e-7 Identity = 48/197 (24.37%), Postives = 91/197 (46.19%), Query Frame = -2
Query: 1140 YLYNVIISGFCEADRMQDAYDHFELM-QKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 1727
+ YNV+I G C+ +++A F+LM ++ LP + L G + G + A LF K+ + G D +Y L+N C+ ++ AL + + M K G P TY ++ F L + +F +M+ P + + ++ C + K+ A ++ +++I + P ++ I + K R T A+
Sbjct: 200 WYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKE-NRITEAE 395
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A0D2QJ46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G114200 PE=4 SV=1) HSP 1 Score: 1848.56 bits (4787), Expect = 0.000e+0 Identity = 895/915 (97.81%), Postives = 904/915 (98.80%), Query Frame = -2
Query: 1398 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSK----GTYEI 4130
MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYAT+SSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL+TDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYN+LIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSL KENRI EAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFN+LISALCEQAQQDSA +FMDKMESLGCMPLLFTYNSLIKCLSQK LFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIY+CIIGSLFRQKKVSEATAMF+RMLESGVDPDEIIYLTMINGFSNNGRVIEAD+LFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWF+MRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYN IISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSK TY I
Sbjct: 1 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATVSSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNMLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCLSQKSLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFSMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNGIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKEIAGSTYSI 915 HSP 2 Score: 195.667 bits (496), Expect = 1.115e-47 Identity = 164/670 (24.48%), Postives = 302/670 (45.07%), Query Frame = -2
Query: 1173 QMMEQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERD-LIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3143
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +N+LI LC++ + A D M E +P L Y SL L ++G +AESL +M++QG F D+ +IN +CK ++ A + +M G +P YN +I + +F +M+E G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K+N + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + AL + K++ MP L+ YN +I + +DA MQ +G+ P+Q T I++ H K G ++ A + ++M G P +Y ++ L + ++ EA ++ M + G+ P + Y ++ F ++ + A ++F EM+ + P + L+ L + + C + ++ G P + I F
Sbjct: 51 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNMLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCLSQKSLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNF 696 HSP 3 Score: 138.272 bits (347), Expect = 1.174e-29 Identity = 148/689 (21.48%), Postives = 289/689 (41.94%), Query Frame = -2
Query: 1335 VVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYR-MLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGL--QPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPK-GYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGL-VKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKN--LRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 3380
V +A S + S+G +D + Y LI + + +A Y ++ G PDS N+++ K+G + +LF++++ +P+ F+ ++ C + + A MI+ N+ Y +LI L ++ + EA + ++ L+P+ + +Y Y L V++A +L G ++ + K + LI+ C+ + A +M +GC P +TYN+LI + GLF+ L N+M QG+ P T ++I+ +C+ G ++ A +L+ M + + P Y +I SL ++ ++ EA + RML G+ PD +++ ++ + E D F M+ AI + L+ + + + K +E++L L V + LIS ++ + + A +D M+ L Y SL+ S+K F E A E L + Q + P + + +++ A ++ +++ P + +Y+ II ++ +A F M + GV P+++ + ++ G G + A LF++M P Y L++GL + + + + L M GL+P+ Y ++ F AF++ + M
Sbjct: 75 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPA---FNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNMLIDGLCQKGYLEEAIQMFD------LMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFG-------------------------KMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKG---YELDIAF--MVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCL-----SQKSLF------EDA-ESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLM 712
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A061G037_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_014940 PE=4 SV=1) HSP 1 Score: 1536.55 bits (3977), Expect = 0.000e+0 Identity = 739/988 (74.80%), Postives = 844/988 (85.43%), Query Frame = -2
Query: 1167 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 4130
M KR+LS HLFFK+RRA+TTS LPLDPS+A +SSI DH S CLS +EQLI RGLLSSA++L QR++S SS VSDA++ VDFVT+RGLDLDLST+ LIKKLV+SG+ LAYS YSD II RGI PD I NS+VICLCKLGKLEEA+ LFDRLL +NS EKPAFNALVR L +QERFLD FDYF+ M +I VNLGCWYYN LIDGLCQKG LEEAIQMFDLM E PTLHLYKSLFYGLCK GWV+EAE L G++ESQGF+VD+TMYTSLI YCK RKMKMA+R+Y RMLK GC PDSYTYNTLIHGFVKMGLFD GWVL+NQMME+GLQP V+T+HVMISNYCREGK +CASMLLN+M+S NLAP+ HCYTVLITS YKENR+ EA E Y+ ML GG+VPDHVLFF LMKMYPKGYEL +A M+++AIA+NGCGFDPLLL VS +E+LEQKI +LI +I K+NL LA VAF +LISAL E + D+A +FMDK+ +LGCMPLLFTYNSL+KCLSQ+GLFEDA+SL++ MQ +GIFPDQAT LI++NEHCKHG+L AFDILDQMEDRGMKPGVAIY+CIIGSL RQK++ EA MF+RMLESG DPDEI+Y+TMING++ NGR+IEA +LF +MI AIRPTSHSYTALISGLVKK+MTDKGC YL++ML DGLVPN VLYTSLI+NFL+K EFEFAFRLVDLMDRNQIE DLI YI+LVSG R+I+SRKRW +++R SERARE LF+LLH + LLP+EK LRVSDSSPEAMKCFALKL+QKVK+TRFMPNLYLYN IISGFC ADRMQDAYDHFELMQKEGV PNQVT TILMGGHIKAGEIDHAI LFNKMNAD CTPD I Y L+ GLCQA RLLEALSLLH MHKRGLIP K TYE +L +FC SYL +PAFKIFEEM+ + P+ Y NWLLCILC Q+KLREA IV+D++IQRGKYP K T+ L +T RK
Sbjct: 1 MIKKRLLSCHLFFKTRRAITTST-LPLDPSFAAVSSICTDHKSFCLSLTEQLIKRGLLSSAQQLIQRIISQSSSVSDAITAVDFVTARGLDLDLSTFGALIKKLVRSGYPQLAYSLYSDNIIRRGINPDPFIVNSMVICLCKLGKLEEASTLFDRLLMNNSSEKPAFNALVRELFAQERFLDVFDYFVAMSDIGVNLGCWYYNGLIDGLCQKGNLEEAIQMFDLMRETAGLSPTLHLYKSLFYGLCKHGWVLEAEFLIGEIESQGFYVDRTMYTSLIKEYCKDRKMKMAMRIYLRMLKTGCEPDSYTYNTLIHGFVKMGLFDQGWVLYNQMMEKGLQPDVITYHVMISNYCREGKANCASMLLNSMVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTGGIVPDHVLFFTLMKMYPKGYELHLALMIVQAIAVNGCGFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCLLPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRK 987 HSP 2 Score: 186.808 bits (473), Expect = 1.167e-44 Identity = 156/642 (24.30%), Postives = 279/642 (43.46%), Query Frame = -2
Query: 1998 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFI-KMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFD-----PLLLPVSANEELEQKIVIL------IEEILKSNLH---LAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDL 3878
+ S L + Y VLI + L A Y + G GI+PD + +++ K +L A ++ + N C F+ L+ + E + I K+ N++L + +LI L + L+ A+ D + +P L Y SL L ++G +A+SL M+ +G F D+ Y ++N +CK + A + +M G +P Y+ +I + +F +M+E G P + + MI+ Y + G++ A L MI + P +H YT LI+ L K++ + + +RML GLVP+ VL+ L+ + + E + AF ++ + N D L+ V N ++ + E+L LH L + +S +A + A M K++ MP L+ YN +I +DA MQ +G+ P+Q T I++ H K G ++ A D+ ++M P YN +I L + ++ EA ++ M + G+ P + Y ++ F + I A ++F EM+ + + P +SY L+ L ++ + + M+ G P L ++ E +F F + D+
Sbjct: 365 MVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTG-GIVPDHVLFFTLMKMYPKGYELHLALMIVQAIAV-NGC---GFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMN-LGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCLLPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRKQGECDFGFMIQDI 1000 HSP 3 Score: 181.8 bits (460), Expect = 4.163e-43 Identity = 178/816 (21.81%), Postives = 339/816 (41.54%), Query Frame = -2
Query: 1572 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLM------PERTESLPTLHLYKSLFYGLCKQGWVVEA-------------------------ESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRG--MKPGVAIYNCIIGSLFRQKKVS------EATAMFV-----RMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLR--VSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEID 3878
+ S+G +D + Y LIK+ + + +A Y ++ G PDS N+++ K+G ++ +L+++++ + ++ ++ C + + A M++ N+ Y VLI ++ L EA +++ M P+ + +Y Y L +V+A E L GK+E + +T LI+ +GRK+ A+ +++ +GC P +TYN+L+ + GLF+ L + M ++G+ P T+ +M++ +C+ G + A +L+ M + + P Y +I SL ++ R+ EAE+ + RML G PD +++ ++ Y K L + A + E+ +IE+ ++ H ++ LIS L ++ D ++D+M G +P + Y SLI +KG FE A L++ M I D T + +++ C++ + + + +R M + Y C+ L R+KK+ EA F ++ E+ P+ +Y +I+GF R+ +A F M +RP + T L+ G +K D KM D P+ + Y +LI Q A RL++ + L +H++ L+P++ ++ + A K+ +++ + +P Y YN ++ CE ++++AY F+ M + G P + T +L K GE D
Sbjct: 260 IESQGFYVDRTMYTSLIKEYCKDRKMKMAMRIYLR-MLKTGCEPDSYTYNTLIHGFVKMGLFDQGWVLYNQMMEKGLQPDVITYHVMISNYCREGKANCASMLLNSMVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTGGIVPDHVLFFTLMKMYPK-GYELHLALMIVQAIAVNGCGFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRL-----------------------IEARQLFEK----MIEDAIRPTSH----SYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCL---LPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQ------AGRLLEAL-----------------------------------------SLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRKQGECD 992
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: F6HAK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g01780 PE=4 SV=1) HSP 1 Score: 1097.03 bits (2836), Expect = 0.000e+0 Identity = 542/929 (58.34%), Postives = 685/929 (73.74%), Query Frame = -2
Query: 1365 MTNKRVLSRHLFFKSRRAVTT-SAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSA----NEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLA 4130
M K + R LFF ++ + T S AL PS A + H LC + +++LI RG+LS +++ +R++ S VSDA+ V+F +RGL+LD Y VL++KLV SG A + Y DY+I RGIIPDS NS+VIC C LGKLEEA FDRL +S KPA NA++R LC++ER L+AFDYF+++ ++ + +G W +N LIDGLC KG+++EA MFD M ERT T+HLYK+LFYGLC+Q V EAE G+MES+G F+DK MYTSLI+ YC+G+KM+ A+RV+ RMLKMGC PD+YTYNTLIHGFVK+GLFD GW+L NQM E GLQP+VVT+H+MI YC EGKVDCA LL++M S NL P+ H YTVLIT+LYKENR+ E EE Y++ML+ G+VPDHVLFF LM+ PKG+EL +A +L+AIA NGC D LL SA +++EQ+I L+ EI++ N LA VAF + ISALC + D+A FMDKM SLGC PLL TYNSLIKCL Q+ L EDA+SL++ MQ GI PD AT LI+++EHC HG+L AF +LDQM +RG+KP VAIY+ IIG L R+K++ EA +F MLE+GVDPD IIY+TMI+G+S N R IEA +LF +MI +P+SHSYTA+ISGLVK+NM DKGC+YL ML DG VPN VLYTSLI+ FL+K E EFAFRLVDLMDRNQIE D+I I+LVSG R+I+ R+RW+ ++ GS R RE L LLH+ ++P+E NL SP +K FAL L+QK+K + FMPNLYLYN IISGFC A+ +QDAY+HFELMQ EGV PNQVTFTIL+ GH + GEIDHAIGLFNKMNADG PDGI Y L+ GLC+A RLL+ALS+ H MHKRGL P+K +YE +L+ C S+L
Sbjct: 1 MLKKGLKPRRLFFTPKKNLATCSPALDPPPSSAPTTE---HHNKLCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCASHLG 926 HSP 2 Score: 161.384 bits (407), Expect = 1.232e-36 Identity = 123/511 (24.07%), Postives = 226/511 (44.23%), Query Frame = -2
Query: 1173 FNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQ--SLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 2696
FN LI LC++ D A Y D M E G + Y +L L ++ E+AE + M+++G F D+ +I+ +C+ + A + +M G P YN +I + + + +M E G+ P+ + Y MI + G+V A L M + P+ HSYT LI+ L K+N + +KMLD G+VP+ VL+ +L+ + E A +++ + +N DL S + + E+ E L + R+ +L + +S AL + K+ P L YN +I + ++DA +LMQ+ G++P+ T+ I++ H G++ A GL ++MN G P +Y ++ L + R+LEA ++ +M + G+ P Y ++ + + A+ A ++F++M+ + P + ++ L + + + C +++ G P + I F
Sbjct: 201 FNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLL------------STSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQF 699 HSP 3 Score: 138.272 bits (347), Expect = 1.715e-29 Identity = 127/558 (22.76%), Postives = 238/558 (42.65%), Query Frame = -2
Query: 1209 LDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDR-GMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFY---RSISSRKRWFAMRR-GSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPN----QVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 2855
L + F + + L+ CG+ LL + + E + + ++ + N ++ C + + A D++ + P N++++ L + +A R+ GI +I+ C G+++ AF + D M +R G+ + +Y + L RQ++V EA M G D+++Y ++I+G+ ++ A R+F M+ P +++Y LI G VK + DKG +M + GL PN V Y +I + ++ + + A L+ M + + Y L++ Y R + + + M G F L+ +Q PK L + ALK++Q + + +L L +S QD E + E V N V F I + AG+ D A+ +KM + GC P Y L+ L Q + +A SL+ +M + G++P TY I++ C+ AF + ++M P + + ++ L ++++ EA V+ +++ G P
Sbjct: 78 LAVEFAAARGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQ---PKGHELHL-----------ALKILQAIAKNGCNLDLCL----LSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDP 617
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: V4U6Q9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004237mg PE=4 SV=1) HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0 Identity = 507/996 (50.90%), Postives = 674/996 (67.67%), Query Frame = -2
Query: 1173 MTNKRVLSRHLFFKSRRAVTTSAAL-----PLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSAN----EELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 4130
M ++ S H K+RR TS L PL + S +DH C S ++QLINRGL++SA+++ QR+++NS+ +SDALS DF RG+ D +Y+ L+KKL++ G A Y + + GI PD +I NS++I CKLG +E+A FDRL++ N K A +++R L ++E+FL+AFDYFIK+ N V+L CW YNVLIDGLC KG+L+E +++ ++M ++ +P LH YKSLFY LCK VEAES +MESQGF+VDK MYTSLIN YC R MKMA+R+++RMLK GC PDSYT NTLIHGF KMGLFD GWVL++QM + G QP++VT +MISNYCREG+VD A MLLN+ +S NLAP+ HCYTVLI +LYK NR+ E +E Y++ML + PDH+L F L+K P+G EL A M+L A GCG DPL +SA +L Q+I +L+ +I+KS+ LA VAF + ISALC+ + + A + ++ + G PL+FT N+LIKC Q G E A +++ MQ GI D T LI++ +CK GNL+ A DILDQME RG KP VAIY+ IIG L ++K++ EA MF RML++G+DPDE+ + TMING+ N + IEA +LF +M +++P S+ YTALISGLVKK M D GC YL++ML DG VPN VLYT+LI++FL+ EFEFA RL +LM NQIE DLI YI+LVSG R I+ RK+W + R S+ +E LF L + +L+P+ K+ S K K++ KVK FMPNLYLYN I C RM DAYDHF++M++EG+ PNQVTF IL+ GHI AGEID AIGLFN+MNADGC PD VY L+ GLCQA RL S+ + MHKRG +P K TYE +L+ FC + L++PAF +F+EM+V+ P L CNWLL IL ++ EA IV D + +RG+ P K T+ + K F
Sbjct: 1 MVTRKPGSSHFLSKTRRRAITSCTLEVEREPLANVASASQSTFSDHKMFCFSLADQLINRGLIASAQQVIQRLIANSASLSDALSAADFAAVRGMRFDSGSYSALMKKLIKFGQSQSALLLYQNDFVALGIDPDPAILNSVIIGYCKLGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNRRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGWVLYSQMSDWGFQPNMVTDLIMISNYCREGEVDAALMLLNSKVSSNLAPSVHCYTVLIDALYKHNRLMEVDELYKKMLANRVAPDHLLSFILLKNCPEGTELQHALMLLCEFAKIGCGIDPLARSISATLNPTGDLCQEIELLLRKIVKSDPKLANVAFTIYISALCKGGKYEKAYVCLFQLVNFGYRPLVFTCNTLIKCFYQVGFLEGANAIVELMQDTGIVADVETYLIMVEGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGCMYLDRMLADGFVPNVVLYTALINHFLRAGEFEFASRLENLMVTNQIEFDLIAYIALVSGVCRRITGRKKWLDVNRCSDSGKEMLFHKLQQGTLVPRTKSTAFSAVFSNGKKGTVQKIVLKVKDIEFMPNLYLYNDIFLLLCGVGRMDDAYDHFQMMKREGLRPNQVTFCILINGHIAAGEIDQAIGLFNQMNADGCVPDKTVYNTLLKGLCQAGRLSHVFSVFYSMHKRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILFQEKHFHEAQIVLDVMHKRGRLPCKSTRGFWRKHF 996
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A059CBT8_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_D00222 PE=4 SV=1) HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0 Identity = 489/941 (51.97%), Postives = 675/941 (71.73%), Query Frame = -2
Query: 1239 DPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEK-PAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELE--QKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVY 4049
+P + ADH SL LS EQLI RG SSAR + +R++ + DA+S V+++ SRGLDLDL++ L++KLVQ G LA ++Y++ ++ RGI+PDS + + +++CLCKLGKL EA FDR + + A +A+ R LC++ L+AFD+F+ +I V++ YN LID LC KGY++EA+++F L E TE PTLH YKSLFYGLCK+G +VEAE L +ME+QGFFVDK MY LI Y K RKMKMA+R+++RMLK+GC D +T+NTLI+GF+K G+FD GW ++ QM++ G+QP+VVT+H+MISNYCREG+VDCA LLN M+ ++ P+ H YT LI SLYK++++TEA+E +RML+ G++PD + F +++M+P+G EL +A+M+L+AI G L + ++ ++ Q I L+E I + +L+LA +AF + ISALCE+ D+A +DK +S+GC +LFTYNSLIKCL KGLFE+AESL + +Q +GI PD T LI+IN +CK GNL+ A+ ++DQ+ +RG+KP VA+Y+CIIGSL K++SEA +F RMLE G+DPDE IY+TMIN ++ +GR++EA LF +MI I+PTS+SYTALI+GLVK++MT+KGC YL+KM+ DG PN VLYTSLI ++L+ EF+FAF LVDLM +NQI+ DL+ YI ++ G R IS + +W R S +AR+ LF LL +SL ++NL+V + PEAMK FAL L +K+K + FMPNL+LYN +ISGFC A+ ++DAY H ELMQ+EG+ PNQVT+TIL+G HI GEID A+GLFNKMNADGC PDG+ Y LV GLC RLL+ LSL++ MHKRGL PSK +Y +L C S L + AFKIFEEM+ ++ P + N L LCV + EA I++
Sbjct: 1 EPPASVAPGNSADHGSLTLSLLEQLIRRGQFSSARSVVRRMIIRAPSAPDAVSAVNYLASRGLDLDLNSCGALLRKLVQCGEYRLAEAWYNENVVDRGIVPDSCMMDPMIVCLCKLGKLGEAKREFDRCVELGALPNVQACDAIFRELCARGMALEAFDFFVGLIGAGVSMRIGCYNQLIDALCLKGYMDEAVKVFCLQQEITELPPTLHQYKSLFYGLCKRGRIVEAEQLSIEMEAQGFFVDKVMYNCLIFGYSKDRKMKMAVRIFFRMLKLGCEVDDHTFNTLIYGFMKWGIFDKGWAMYKQMVDSGIQPTVVTYHIMISNYCREGEVDCALQLLNEMLVCDITPSVHSYTTLIASLYKKDKLTEADELCKRMLDNGVLPDPIFFLVVIRMHPRGCELQLAYMMLQAI-----GNSVSLASNTWDDSMDFGQNIEHLLEGIARKDLNLASIAFAICISALCERGDIDAAILLVDKADSVGCQLMLFTYNSLIKCLCYKGLFEEAESLHDLIQDRGIVPDLETYLIMINGYCKQGNLQSAYRVMDQISERGLKPNVAMYDCIIGSLSSIKRISEAEDLFKRMLEDGMDPDETIYMTMINAYARSGRLLEASELFDKMIDNFIKPTSYSYTALINGLVKRDMTEKGCIYLDKMIGDGYEPNNVLYTSLIGHYLRGGEFKFAFMLVDLMYKNQIKCDLVTYIVVLRGVCRHISGIKHKWGITSRASYKARKMLFDLLQSRSLATIDRNLKVPVNLPEAMKHFALNLFKKIKDSEFMPNLFLYNGLISGFCRANMIEDAYHHVELMQREGLQPNQVTYTILIGEHINRGEIDSAVGLFNKMNADGCLPDGLAYNRLVRGLCSCGRLLDGLSLVYAMHKRGLFPSKLSYNCLLNQLCSSGLNIHAFKIFEEMLTHNIIPSVRCSNLLHSNLCVSGRWHEAQIIH 936 HSP 2 Score: 84.7297 bits (208), Expect = 3.622e-13 Identity = 86/401 (21.45%), Postives = 158/401 (39.40%), Query Frame = -2
Query: 2928 EQLINRGLLSSARKLFQRVVSNSSPV---SDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQ-------------KGYLEEAIQMFDLMPERT--------------------------------ESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERM 3983
+Q+ RGL + ++ ++ + S + S+A + G+D D + Y +I +SG L A + D +I I P S +++ L K E+ I D+++ D + +L+ F AF M + Y V++ G+C+ + + +FDL+ R+ E +P L LY L G C+ + +A M+ +G ++ YT LI + ++ A+ ++ +M GC PD YN L+ G G G L M ++GL PS ++++ +++ C G A + M++ N+ P+ C +L ++L R EA+ + M
Sbjct: 541 DQISERGLKPNV-AMYDCIIGSLSSIKRISEAEDLFKRMLEDGMDPDETIYMTMINAYARSGRLLEASELF-DKMIDNFIKPTSYSYTALINGLVKRDMTEKGCIYLDKMIGDGYEPNNVLYTSLIGHYLRGGEFKFAFMLVDLMYKNQIKCDLVTYIVVLRGVCRHISGIKHKWGITSRASYKARKMLFDLLQSRSLATIDRNLKVPVNLPEAMKHFALNLFKKIKDSEFMPNLFLYNGLISGFCRANMIEDAYHHVELMQREGLQPNQVTYTILIGEHINRGEIDSAVGLFNKMNADGCLPDGLAYNRLVRGLCSCGRLLDGLSLVYAMHKRGLFPSKLSYNCLLNQLCSSGLNIHAFKIFEEMLTHNIIPSVRCSNLLHSNLCVSGRWHEAQIIHHLM 939
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: U5GGL2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s21110g PE=4 SV=1) HSP 1 Score: 959.518 bits (2479), Expect = 0.000e+0 Identity = 495/985 (50.25%), Postives = 667/985 (67.72%), Query Frame = -2
Query: 1209 MTNKRVLSRHLFFKSRRA-VTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSC--EKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPK--GYELDIAFMVLKAIALNGCGFDPLLLP----VSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSI-SSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGC-TPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 4130
M +R L+FK ++ +T++ A+ LDP IP DH SLC S L+ RGLLSSA+++ QR +++S V DA+S V+F ++ G+DL LI+KLV GH A FY D ++ RGI PDS+I NS+VICL KLGKL++A LFDR + C A + +++ Q++F++AFDYF+++ + NV LG W YNVLIDGLCQ+GY+ EAI++ D+M T PTLH+ K+LFYGLCK+GW +EAE +F +ME+QGFFVDK MYTSL+N Y + +KMKMALRVY+RMLK G PD T NTLI+GF KMGLFD WVL+N M + G+QP+ VT+ +MI NYC++GK+DCA LLN+M NL P HCYT ++ +LYK NR E +E+ ERML G+VPDHVLFF LMK PK G+EL + ++L+AIA NGCG D L +++ LEQ+I +L+ EI +S+L+L VA + +SALCE + +SA ++ M + GC+PLLFT+NSLIK L Q GL ED +SL+ MQ GI P+ T LI++NE+CK +L AF IL+QM++ G+KP VAIY+CII L +Q+++SEA +F RMLE+GVDPDE+ Y+TMIN ++ NG+ ++A LF MI AI+P +K+ MT +GC YLEKML +G VPN VLYT LI++FL+ EF++AFRL+DLM R+QIE DL+ +I+ +SG R+I ++KRW+ R S RAR+ LF LLH++ L E VS FMPNLYLYNV +SGFC + ++DAY LMQ+EG+LPN+VTFTIL+G H +AGEID AIGLFN+MNADGC TPD Y L+ LC++ R L+ALSL+H + KRG P++ YE YFC ++++PAF+IFEEMV + P LY N LL ILC ++KL EA D + +RG P
Sbjct: 1 MIKRRPFCHALYFKPKKGPITSTCAVSLDPQ-----PIPNDHTSLCQSLVHDLLRRGLLSSAQQVVQRFIASSPTVHDAISAVEFASASGMDLGPGISGELIRKLVDLGHPLSAREFYHDLVVARGIEPDSNIVNSLVICLAKLGKLDDAVKLFDRHIGSGDCLVSNAACSTILKGFYEQDKFVEAFDYFVRISDANVKLGMWAYNVLIDGLCQQGYVGEAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVDKVMYTSLMNAYGRDKKMKMALRVYFRMLKNGYDPDICTCNTLIYGFSKMGLFDKAWVLYNLMNDLGIQPNEVTYSIMIHNYCKKGKLDCAMSLLNSMAPCNLTPCVHCYTPIMVTLYKLNRCLEVDEWCERMLESGIVPDHVLFFVLMKNKPKGLGFELQLCLLMLQAIAKNGCGLDCSSLTNSDKINSTLALEQEIELLLREIARSDLNLGNVAGGIYVSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGISPNLETYLIMVNEYCKQEDLALAFGILEQMDEMGLKPSVAIYDCIIACLSQQRRISEAETLFCRMLENGVDPDEVAYMTMINAYARNGKGVKALHLFEMMIKNAIQP------------MKRKMTIEGCVYLEKMLAEGFVPNIVLYTFLINHFLKMGEFKYAFRLIDLMFRSQIEADLVLHIAWISGVCRNIFGTKKRWYMTNRMSTRARKLLFNLLHQKVSLTGEDVFSVS--------------------AWFMPNLYLYNVTVSGFCWVNLIEDAYHQLRLMQEEGLLPNEVTFTILIGAHGRAGEIDRAIGLFNRMNADGCSTPDRCTYNTLLKSLCRSGRELDALSLVHTISKRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLHEAYRASDVMFERGFLP 948 HSP 2 Score: 135.576 bits (340), Expect = 9.490e-29 Identity = 126/517 (24.37%), Postives = 219/517 (42.36%), Query Frame = -2
Query: 2022 NVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSN---LHLAKVAFNVL---ISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMK-PGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFE 3551
++NLG + + LC+ G E A+ + M +P L + SL L + G + +SL M++ G + Y ++N YCK + +A + +M +MG +P Y+ +I + LF +M+E G+ P V + MI+ Y R GK A L MI + P K E + E+ML G VP+ VL+ L+ + K E AF ++ + + D L+L ++ + + I + +N K+ FN+L +S E SA + MP L+ YN + L EDA L MQ +G+ P++ T I+I H + G ++ A + ++M G P YN ++ SL R + +A ++ + + G P+ + Y + F I A R+F EM+ + P + L+ L ++ + + M + G +P+ + + L FL + +F
Sbjct: 475 DLNLGNVAGGIYVSALCEGGKTESALDCLENMVN-AGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGISPNLETYLIMVNEYCKQEDLALAFGILEQMDEMGLKPSVAIYDCIIACLSQQRRISEAETLFCRMLENGVDPDEVAYMTMINAYARNGKGVKALHLFEMMIKNAIQP------------MKRKMTIEGCVYLEKMLAEGFVPNIVLYTFLINHFLKMGEFKYAFRLIDLMFRSQIEAD-LVLHIAWISGVCRNIFGTKKRWYMTNRMSTRARKLLFNLLHQKVSLTGEDVFSVSAWF----------MPNLYLYNVTVSGFCWVNLIEDAYHQLRLMQEEGLLPNEVTFTILIGAHGRAGEIDRAIGLFNRMNADGCSTPDRCTYNTLLKSLCRSGRELDALSLVHTISKRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLHEAYRASDVMFERGFLPDESVMSPL---FLSRLDFH 964
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: K4BIJ2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g093150.1 PE=4 SV=1) HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0 Identity = 483/966 (50.00%), Postives = 668/966 (69.15%), Query Frame = -2
Query: 1221 KSRRAVTTSAALPLDPSYAT--ISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN--SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVI----LIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQR 4091
+++R +TTS PL PS A + + P +H +LC S + LI RGL SA+K+ +R++ +SS V +A+S V+F SRG++ D+++YA LI++LV SG A + Y D I+ RGI P+ S+ NS+ IC C LGKLEEA +LFD+L+ C N L++ C Q+R LD FD F++ IN V L YN L+D LC +GYL+EA+ +FD M +R PT+HL+K L L K+G V EA+ L MES GF +DK MYT+LIN Y K +KMK A+ ++ RM K+GC PD YTYNTLI+GF+ +G+FD GW+L QM+E GL+P V++ +MI+ YC+E KVDCA LL+++ N+ P+ H YT LI++LYKENR+ E ++ Y +ML GLVPDHVLFF L+ +P+G E+ +A L+AIA NGCG DP +P + ++ I++ L+ EI NL LA VAFN+ + ALC + DSA MDKM SL P L YNS+IKCL QKGL EDA+ L+ MQ QG P+QAT LI++NE+CK G+++ A ++LDQME+ G+KP VAIY+ +IG L R+K++ EA +F RMLE+G+ PD+ +++TMIN S NGR I+A LF M+ ++P+ ++YTALI+GLVKKNM +KGC YL++M+++G +PN VLYTSLI FL+KREFEFA +LVDLM+R+++ERDL+ YI+LVSG R+I S ++ +R E ++E LF+LLH+ ++LPKEK L++S +S E +K AL+LI KVK T MPNLYLYN IISGFC A+ M+DAY H MQ EG+LPNQVTFTIL+ GH ++GEI+ A+ LFN+MNA GC PD IVY L+ GLC+ RL++ALSL + M K+GL PSK +YE +L C S V A KI +M+ P + L+CIL + K EA +YD ++++
Sbjct: 18 RTKRPLTTS---PL-PSEAISCVHTSPLNHKTLCFSLAANLIVRGLFDSAQKVIRRIIKHSSSVPEAISAVEFSISRGVEPDVTSYAFLIRQLVTSGETLKAEALYVDCILNRGIEPNHSLLNSMAICYCNLGKLEEAKLLFDKLVDMKLMPCSSTC-NELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDILCFQGYLDEALYVFDEMCDRGVP-PTVHLFKRLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKEHKVDCALTLLDDINQWNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDPSFIPSPTSRKVTTDIMLDIDCLLGEIAARNLPLACVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKLLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGRKKRIDEALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQFLRKREFEFALKLVDLMERSEVERDLVTYITLVSGVSRNIRSVNEKGLVPQRRYEESKEMLFRLLHQSAMLPKEKCLKISVNSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFCWAESMKDAYKHLHTMQNEGILPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCPPDNIVYNTLIRGLCKHGRLMDALSLSYTMLKKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFMYDLLLKK 977 HSP 2 Score: 168.318 bits (425), Expect = 6.606e-39 Identity = 165/643 (25.66%), Postives = 272/643 (42.30%), Query Frame = -2
Query: 1173 ISKNLAPNAHCYTVLITSLYKENRITEAEEFY-ERMLNGGLVPDHVLFFKLMKMY---PKGYELDIAFMVLKAIALNGCGF--DPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPK--EKNLRVSDSSPEAMKCFALKLI---------------QKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3032
IS+ + P+ Y LI L +AE Y + +LN G+ P+H L + Y K E + F L + L C + L+ + + + +E I S + LA +N L+ LC Q D A Y D+M G P + + LI LS++G E+A+ L M++ G D+ +IN + K ++ A + +M G +P YN +I + + +M+E G++PD + Y MI + +V A L ++ + P+ HSYTALIS L K+N + KML GLVP+ VL+ +LISN + E A + + +N D F S +SRK + +L LL + +NL P A F + +I K+ P+L YN +I + +DA E+MQ +G +PNQ TF I++ + K G+I A+ + ++M G P +Y ++ L + R+ EAL + M + G+ P K + ++ + A+ A ++F M+ P L+ L + + + C+ +I+ G P + IK F
Sbjct: 88 ISRGVEPDVTSYAFLIRQLVTSGETLKAEALYVDCILNRGIEPNHSLLNSMAICYCNLGKLEEAKLLFDKLVDMKLMPCSSTCNELIKGFCGQDRILDGFDVFVEAI-NSEVLLAFSCYNKLVDILCFQGYLDEALYVFDEMCDRGVPPTVHLFKRLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKEHKVDCALTLLDDINQWNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGID--------PSFIPSPTSRKVTTDI-------------MLDIDCLLGEIAARNL------PLACVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKLLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGRKKRIDEALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQF 702
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: M1B6U4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402014825 PE=4 SV=1) HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0 Identity = 482/966 (49.90%), Postives = 667/966 (69.05%), Query Frame = -2
Query: 1221 KSRRAVTTSAALPLDPSYAT--ISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN--SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVI----LIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQR 4091
+++R +TTS PL PS A + + P +H +LC S ++ LI RGL SA K+ +R++ +SS VS+A+S V+F SRG++ D ++YA L ++LV S A + Y D I+ RGI P+ S+ NS+ IC C LGKLEEA +LFD+L+ C N L++ C Q+R LD FD F++ IN V L YN L+DGLC +GYL+EA+ +FD M +R PT+HL+K+L L K+G V EA+ L MES GF +DK MYT+LIN Y K +KMK A+ ++ RM K+GC PD YTYNTLI+GF+ +G+FD GW+L QM+E GL+P V++ +MI+ YC++ KVDCA LLN++ N+ P+ H YT LI++LYKENR+ E ++ Y +ML GLVPDHVLFF L+ +P+G E+ +A L+AIA NGCG D +P + ++ I++ L+ EI+ NL LA VAFN+ + ALC + DSA MDKM SL P L YNS+IKCL QKGL EDA+ L+ MQ QG P+QAT LI++NE+CK G+++ A ++LDQME+ G+KP VAIY+ +IG L R+K++ EA +F RMLE+G+ PD+I+++TMIN S NG+ I+A LF M+ ++P+ ++YTALI+GLVKKNM +KGC YL++M+++G +PN VLYTSLI FL+KR+FEFA +LVDLM+R++IERDL+ YI+LVSG R+I S + +R E ++E LF+LLH+ ++LPKEK L++S SS E +K AL+LI KVK T MPNLYLYN IISGFC A+ M+DAY H MQ EG+ PNQVTFTIL+ GH ++GEI+ A+ LFN+MNA GC PD IVY L+ GLC+ RL++ALSL + M K+GL PSK +YE +L C S V A KI +M+ P + L+CIL + K EA +YD ++++
Sbjct: 18 RTKRPLTTS---PL-PSEAISCVHTSPVNHKTLCFSLADNLIVRGLFDSAEKVIRRIIKHSSSVSEAISAVEFSISRGVEPDATSYAFLFRQLVTSRETLKAEALYVDCILNRGIEPNHSVLNSMAICYCNLGKLEEAKLLFDKLVDKKLLPCSSTC-NELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDGLCFRGYLDEALYVFDEMCDRGVP-PTVHLFKTLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKDHKVDCALTLLNDINQCNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDLSYIPSPTSRKVTTDIMLDIDRLLGEIVARNLPLASVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKFLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGREKRIDEALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQFLRKRQFEFALKLVDLMERSEIERDLVTYITLVSGVSRNIRSVDGKGLVPQRRYEESKEMLFRLLHQSAMLPKEKCLKISVSSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFCWAESMEDAYKHLHTMQNEGIQPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCPPDNIVYNTLIRGLCRHGRLVDALSLSYTMLKKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFMYDLLLKK 977 HSP 2 Score: 175.252 bits (443), Expect = 4.384e-41 Identity = 165/638 (25.86%), Postives = 283/638 (44.36%), Query Frame = -2
Query: 1173 ISKNLAPNAHCYTVLITSLYKENRITEAEEFY-ERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSA--NEEL-----EQKIV----ILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEK------NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3032
IS+ + P+A Y L L +AE Y + +LN G+ P+H + + Y +L+ A ++ + D LLP S+ NE + + +I+ + +E I S + LA +N L+ LC + D A Y D+M G P + + +LI LS++G E+A+ L M++ G D+ +IN + K ++ A + +M G +P YN +I + + +M+E G++PD + Y MI + + +V A L +++ + P+ HSYTALIS L K+N + KML GLVP+ VL+ +LISN + E A + + +N DL + S +SRK + +R L +++ R L L + A C + K+ P+L YN +I + +DA E+MQ +G +PNQ TF I++ + K G+I A+ + ++M G P +Y ++ L + R+ EAL + M + G+ P K + ++ + A+ A ++F M+ P Y L+ L + + + C+ +I+ G P + IK F
Sbjct: 88 ISRGVEPDATSYAFLFRQLVTSRETLKAEALYVDCILNRGIEPNHSVLNSMAICYCNLGKLEEAKLLFDKLV------DKKLLPCSSTCNELIKGFCGQDRILDGFDVFVEAI-NSEVLLAFSCYNKLVDGLCFRGYLDEALYVFDEMCDRGVPPTVHLFKTLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKDHKVDCALTLLNDINQCNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDL--------SYIPSPTSRKVTTDIMLDIDRL---LGEIVARNLPLASVAFNIYMIALCLGGELDSAQLC-----MDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKFLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGREKRIDEALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQF 702
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A067FPQ9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043758mg PE=4 SV=1) HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0 Identity = 474/942 (50.32%), Postives = 630/942 (66.88%), Query Frame = -2
Query: 1173 EQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSAN----EELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3983
+QLINRGL++SA+++ QR+++NS+ +SDALS DF RG+ D +Y+ L+KKL++ G A Y + + LG +E+A FDRL++ N K A +++R L ++E+FL+AFDYFIK+ N V+L CW YNVLIDGLC KG+L+E +++ ++M ++ +P LH YKSLFY LCK VEAES +MESQGF+VDK MYTSLIN YC R MKMA+R+++RMLK GC PDSYT NTLIHGF KMGLFD GWVL++QM + G QP++VT +MISNYCREG+VD A MLLN+ +S NLAP+ HCYTVLI +LYK NR+ E +E Y++ML + PDH+L F L+K P+G EL A M+L A GCG DPL +SA +L Q+I +L+ +I+KS+ LA VAF + ISALC+ + + A + ++ + G PL+FT N+LIKC Q G E A +++ MQ +CK GNL+ A DILDQME RG KP VAIY+ IIG L ++K++ EA MF RML++G+DPDE+ + TMING+ N + IEA +LF +M +++P S+ YTALISGLVKK M D GC YL++ML DG VPN VLYT+LI++FL+ EFEFA RL +LM NQIE DLI YI+LVSG R I+ RK+W + R S+ +E LF L + +L+ + K+ S K K++ KVK FMPNLYLYN I C RM DAYDHF++M++EG+ PNQVTF IL+ GHI AGEID AIGLFN+MNADGC PD VY L+ GLCQA RL S+ + MHKRG +P K TYE +L+ FC + L++PAF +F+EM+V+ P L CNWLL ILC ++ EA IV D + +RG+ P T+ + K F
Sbjct: 1 DQLINRGLIASAQQVIQRLIANSASLSDALSAADFAAVRGMRFDSGSYSALMKKLIKFGQSQSALLLYQNDFVA-------------------LGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGWVLYSQMSDWGFQPNMVTDLIMISNYCREGEVDAALMLLNSKVSSNLAPSVHCYTVLIDALYKHNRLMEVDELYKKMLANRVAPDHLLSFILLKNCPEGTELQHALMLLCEFAKIGCGIDPLARSISATLNPTGDLCQEIELLLRKIVKSDPKLANVAFTIYISALCKGGKYEKAYVCLFQLVNFGYRPLVFTCNTLIKCFYQVGFLEGANAIVELMQDT-------------EGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGCMYLDRMLADGFVPNVVLYTALINHFLRAGEFEFASRLENLMVTNQIEFDLIAYIALVSGVCRRITGRKKWLDVNRCSDSGKEMLFHKLQQGTLVTRTKSTAFSAVFSNGKKGTVQKIVLKVKDIEFMPNLYLYNDIFLLLCGVGRMDDAYDHFQMMKREGLRPNQVTFCILINGHIAAGEIDQAIGLFNQMNADGCVPDKTVYNTLLKGLCQAGRLSHVFSVFYSMHKRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILCQEKHFHEAQIVLDVMHKRGRLPCTSTRGFWRKHF 910 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pages
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094142 ID=g.barbadense_cottongen_reftransV1_0094142; Name=g.barbadense_cottongen_reftransV1_0094142; organism=Gossypium barbadense; type=contig; length=4335bpback to top |