g.barbadense_cottongen_reftransV1_0094142, g.barbadense_cottongen_reftransV1_0094142 (contig) Gossypium barbadense
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Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.118e-58 Identity = 169/679 (24.89%), Postives = 319/679 (46.98%), Query Frame = -2
Query: 1932 VSNSSPVSDALST--VDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLT-----DNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVL-----KAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM--ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYR 3926
SN +P++ L + VD S G +++ + L+ + A + ++ +IP N + L + L EA L+ R++ DN + L+R +E+ +A + + I Y++ + C+ L A + M E+ +P+ Y S+ KQG + +A L +M S G ++ TSLI +CK + AL ++ +M K G P+S T++ LI F K G + + +M GL PSV H +I + + K + A L + LA C T+L + L K+ + EA E +M + G+ P+ V + +M + + +D+A +V K + N + L+ N + EQ + ++ + SN+ + V + +I+ LC+ Q A + M E C+ + +YNS+I ++G + A + M GI P+ T ++N CK+ ++ A ++ D+M+++G+K + Y +I ++ + A+A+F +LE G++P + IY ++I+GF N G ++ A L+ +M+ +R +YT LI GL+K +M GLVP+ ++YT +++ +K +F ++ + M +N + +++ Y ++++G YR
Sbjct: 136 TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIV-NQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQ----LLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL-SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD-EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM-SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806 HSP 2 Score: 191.815 bits (486), Expect = 1.277e-48 Identity = 166/731 (22.71%), Postives = 309/731 (42.27%), Query Frame = -2
Query: 1452 YNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGL-QPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTS-HSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKE----------KNLRVSDSS--------PEAMKC-------------------FALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSL 3527
+N L++ + + A+ + + M E + +P L ++ + EA+ L+ +M + G D L+ + K AL V R ++ G PDS Y+ + K L +M E+ L PS T+ +I ++G +D A L + M+S ++ N T LIT K N + A +++M G P+ V F L++ + K E++ A K + + G P + V +I+ LK H +++ F + E+ + +F N+++ L ++G ++A LL++M+++GI P+ + ++ HC+ N++ A + + ++G+KP Y+ +I FR A + M S ++ + ++Y T+ING G+ +A L MI S SY ++I G K+ D E+M +G+ PN + YTSL++ + + A + D M ++ D+ Y +L+ GF +R + + LF L + L P + +NL ++ + ++C A +L +++ +P+ +Y VI++G + + FE M+K V PN + + ++ GH + G +D A L ++M G PDG + ILV+G + + A SL
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLE-LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV--LGLTPSVFHVHT----------IIQGWLKGQKH------------------EEALKLFDESFET--GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF------------CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851 HSP 3 Score: 190.66 bits (483), Expect = 3.238e-48 Identity = 148/569 (26.01%), Postives = 249/569 (43.76%), Query Frame = -2
Query: 2145 TYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMIS-KNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLV 3845
TY +I V+ G++ A D ++ GI + A S++ CK L A +LFD++ + S F+ L+ A +++ KM + + ++ + +I G + EEA+++FD E L + + ++ LCKQG EA L KMES+G + Y +++ +C+ + M +A V+ +L+ G +P++YTY+ LI G + + N M ++ + V + +I+ C+ G+ A LL NMI K L + Y +I +KE + A YE M G+ P+ + + LM K +D A + + G D +P A+ LI C+++ +SAS ++ G P YNSLI G A L +M G+ D T +I+ K GNL A ++ +M+ G+ P IY I+ L ++ + + MF M ++ V P+ +IY +I G G + EA RL EM+ I P ++ L+SG V
Sbjct: 306 TYTSVILASVKQGNMDDAIRL-KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET--GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD---IP----------------------------AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840 HSP 4 Score: 157.147 bits (396), Expect = 1.581e-37 Identity = 156/691 (22.58%), Postives = 286/691 (41.39%), Query Frame = -2
Query: 1182 GLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANE-----ELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPK--EKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQ-----------------------------------KEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFI 3128
G + + F+ +++ Y ++ + D A ++N M+ ++ P +++L + N +TEA+E Y RM+ G+ D+V LM+ + + A VL G D LL ++ +L +L E K ++ + +I A +Q D A D+M S G + SLI + A L ++M+ +G P+ T ++I K+G +E A + +ME G+ P V + II + +K EA +F E+G+ + + T+++ G+ EA L +M I P SY ++ G ++ D +L+ GL PN Y+ LI + + + A +V+ M + IE + + Y ++++G + + K ARE L ++ + L N + E A+ +++ PN+ Y +++G C+ +RM A + + M+ +EG+ P+Q + L+ G G + A+ L+ KM DG D Y L++GL + L+ A L M GL+P + Y +I+ V K+FEEM + P + N ++ + L EA ++D ++ +G P T + +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK-----------ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836 HSP 5 Score: 137.887 bits (346), Expect = 1.461e-31 Identity = 119/513 (23.20%), Postives = 225/513 (43.86%), Query Frame = -2
Query: 1167 AFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGV-DPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLL-HVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 2699
AFN L++A + Q D A +++M L +P N + L Q+ +A+ L +RM A G+ D T +++ + A ++L + +RG +P +Y+ + + + ++ A ++ M E + P + Y ++I G + +A RL EM+ I + T+LI+G K N +KM +G PN+V ++ LI F + E E A M+ + + +++ G+ + +K A++ E L + ++L +D + E L+ K++ PN+ YN ++ G C M A F + ++G+ PN T++IL+ G + + +A+ + N M + +G+VY+ ++NGLC+ + +A LL +++ ++ L S +Y I+ F A +EEM P + L+ LC ++ +A + D + +G P I F K
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG---QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE--------LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666 HSP 6 Score: 75.485 bits (184), Expect = 3.178e-12 Identity = 71/327 (21.71%), Postives = 144/327 (44.04%), Query Frame = -2
Query: 1218 LISGLVKKNMTDKGCTYLEKMLDD----GLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSER-------AREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHF-ELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRG 2162
LI + N T + K++D G N+ + L++ + + R+ + A +V+ M +E D+I + V+ ++ R + R QLL R SL E AL+++ + + P+ LY++ + C+ + A E+ +K+ +P+Q T+T ++ +K G +D AI L ++M +DG + + + L+ G C+ + L+ AL L M K G P+ T+ +++++F + A + +++M V P +++ + ++ QK EA ++D + G
Sbjct: 130 LIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR-------------EEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 2.138e-58 Identity = 159/644 (24.69%), Postives = 283/644 (43.94%), Query Frame = -2
Query: 1455 EAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRL----LEALS 3374
EA LFG+M F ++ L++ K +K + + +M +G + YTYN +I+ + + + +MM+ G PS+VT + +++ +C ++ A L++ M+ P+ +T L+ L++ N+ +EA ERM+ G PD V + ++ K E D+A +L + ++E +VI ++ +I +LC+ D A +M++ G P +FTY+SLI CL G + DA LL+ M + I P+ T +I+ K G L A + D+M R + P + YN +I ++ EA +F M+ PD + Y T+INGF +V++ LF +M + + +YT LI G + + D ++M+ DG+ PN + Y +L+ + + E A + + + ++++E D+ Y + G ++ W LF L +LK ++ P++ YN +ISGFC+ ++AY F M+++G LP+ T+ L+ H++ G+ + L +M + D Y LV + RL LE LS
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME---------------KGKIEADVVI----------------YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW------------DLFCSL-------------------------SLKGVK--------PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGFLEVLS 614 HSP 2 Score: 209.92 bits (533), Expect = 2.182e-55 Identity = 151/575 (26.26%), Postives = 265/575 (46.09%), Query Frame = -2
Query: 1140 LKAIALNGCGFDPLLLPVSANEELEQKI---VILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKE-------KNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 2834
L+ I +G +D +S N L K+ V L E++KS + V F+ L+SA+ + + D F +KME LG L+TYN +I CL ++ A ++L +M G P T ++N C + A ++DQM + G +P + ++ LF+ K SEA A+ RM+ G PD + Y +ING G A L ++M I Y+ +I L K D +M + G+ P+ Y+SLIS + A RL+ M +I +++ + SL+ F + G EKLF + ++S+ P + D EA + F L + + +P++ YN +I+GFC+A ++ D + F M + G++ N VT+T L+ G +A + D+A +F +M +DG P+ + Y L++GLC+ +L +A+ + + K + P TY I+ + C + + +F + + P + N ++ C + EA ++ + + G P T + I+ + ++ SA+
Sbjct: 19 LRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF------------AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC-----LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576 HSP 3 Score: 194.512 bits (493), Expect = 2.808e-50 Identity = 142/630 (22.54%), Postives = 282/630 (44.76%), Query Frame = -2
Query: 1368 VYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3257
+Y+ L + + N L+H +K+ D LF +M++ PS+V F ++S + K D M ++ N + Y ++I L + ++++ A +M+ G P V L+ + G + A V L++++++ V F L+ L + + A +++M GC P L TY ++I L ++G + A +LLN+M+ I D +I+ CK+ +++ A ++ +M+++G++P V Y+ +I L + S+A+ + MLE ++P+ + + ++I+ F+ G++IEA++LF EMI +I P +Y +LI+G + D+ M+ +P+ V Y +LI+ F + ++ L M R + + + Y +L+ GF+++ ++ ++ +LL L + +AM F + +++++ P++Y YN++ G C+A +++D +D F + +GV P+ + + ++ G K G + A LF KM DG PD Y L+ + + L+ M TY ++ D L
Sbjct: 22 IYFSGLSYDGYREKLSRNALLH--LKL---DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA-------------------------------VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP--NIMTYNTLL---DGLCKNGKLEKAMVVF-----EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605 HSP 4 Score: 189.504 bits (480), Expect = 1.227e-48 Identity = 138/538 (25.65%), Postives = 238/538 (44.24%), Query Frame = -2
Query: 2121 NSIVICLCKLGKLEEATILFDRLLT-DNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKG 3731
N ++ CLC+ +L A + +++ N+L+ C R +A +M+ + + L+ GL Q EA+ + + M + P L Y ++ GLCK+G A +L KME D +Y+++I+ CK R + AL ++ M G RPD +TY++LI G + L + M+E+ + P+VVTF+ +I + +EGK+ A L + MI +++ PN Y LI +R+ EA++ + M++ +PD V + L+ + K ++ V E L ++ + L V + LI + + D+A +M S G P + TYN+L+ L + G E A + +Q + PD T I+ CK G +E +D+ + +G+KP V YN +I ++ EA +F++M E G PD Y T+I +G + L EM + +Y L++ ++ DKG
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV-----------------------VDGME--------LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608 HSP 5 Score: 187.963 bits (476), Expect = 4.512e-48 Identity = 141/569 (24.78%), Postives = 253/569 (44.46%), Query Frame = -2
Query: 1995 KLEEATILFDRLLTDNSCEKPA-FNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLM 3698
KL+EA LF ++ F+ L+ + ++F + KM + V+ + YN++I+ LC++ L A+ + M + P++ SL G C + EA +L +M G+ D +T+L++ + K A+ + RM+ GC+PD TY +I+G K G D L N+M + ++ VV + +I + C+ VD A L M +K + P+ Y+ LI+ L R ++A ML + P+ V F L+ + K +L + A + L +E+++ ++ V +N LI+ C + D A M S C+P + TYN+LI + D L M +G+ + T +I+ + + + A + QM G+ P + YN ++ L + K+ +A +F + +S ++PD Y M G G+V + LF + ++P +Y +ISG KK + ++ T KM +DG +P++ Y +LI L+ + + L+ M
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYG-PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL-----------------------IEAEK--------LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581 HSP 6 Score: 177.948 bits (450), Expect = 6.787e-45 Identity = 141/589 (23.94%), Postives = 251/589 (42.61%), Query Frame = -2
Query: 1932 ILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLM---PERTESLPTLH---LYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYR 3680
I F L D EK + NAL+ L + +A D F +M+ ++ L+ + + ++ FDL+ E+ E L H Y + LC++ + A ++ GKM G+ SL+N +C G ++ A+ + +M++MG +PD+ T+ TL+HG + L +M+ +G QP +VT+ +I+ C+ G+ D A LLN M + + Y+ +I SL K + +A + M N G+ PD + L+ N L+ ++L+ ++ V FN LI A ++ + A D+M P + TYNSLI ++A+ + M ++ PD T +IN CK + ++ M RG+ Y +I F+ A +F +M+ GV P+ + Y T+++G NG++ +A +F + + + P ++Y + G+ K + G + G+ P+ + Y ++IS F +K E A+ L M + D Y +L+ R
Sbjct: 22 IYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAK-------MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL-------------------------------CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567 HSP 7 Score: 150.599 bits (379), Expect = 3.980e-36 Identity = 93/344 (27.03%), Postives = 173/344 (50.29%), Query Frame = -2
Query: 2871 ALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEAT-ILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMY 3899
AL+ ++ + ++ D+ Y+ +I L + H+ A + +++ + +GI PD +S++ CLC G+ +A+ +L D L + FN+L+ + + ++A F +MI +++ YN LI+G C L+EA Q+F LM + + LP + Y +L G CK VV+ LF M +G + YT+LI+ + + A V+ +M+ G P+ TYNTL+ G K G + V+F + + ++P + T+++M C+ GKV+ L ++ K + P+ Y +I+ K+ EA + +M G +PD + L++ +
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK-DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565 HSP 8 Score: 135.961 bits (341), Expect = 1.932e-31 Identity = 98/358 (27.37%), Postives = 168/358 (46.93%), Query Frame = -2
Query: 2838 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFM 3908
V DAL+ + ++G+ D+ TY+ LI L G A SD ++ R I P+ NS++ K GKL EA LFD ++ + +N+L+ C +R +A F M++ + YN LI+G C+ + + +++F M R T+ Y +L +G + A+ +F +M S G + Y +L++ CK K++ A+ V+ + K PD YTYN + G K G + GW LF + +G++P V+ ++ MIS +C++G + A L M P++ Y LI + ++ + E + M + D + + M G LD F+
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD-MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG-RLDKGFL 610 HSP 9 Score: 72.0182 bits (175), Expect = 2.692e-11 Identity = 61/224 (27.23%), Postives = 97/224 (43.30%), Query Frame = -2
Query: 3255 SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP---AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRV 3917
+ V D + ++ RGL + TY LI Q+ A + ++ G+ P+ N+++ LCK GKLE+A ++F+ L S +P +N + +C + D +D F + V YN +I G C+KG EEA +F M E LP Y +L + G + L +M S F D + Y + ++ GR K L V
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL--QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG-PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEV 612
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP101_ARATH (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 7.017e-58 Identity = 149/592 (25.17%), Postives = 260/592 (43.92%), Query Frame = -2
Query: 1539 YTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNA 3314
+ L++ K +K + + + +M ++G + YTYN LI+ F + L +MM+ G +PS+VT +++ YC ++ A L++ M+ P+ +T LI L+ N+ +EA +RM+ G P+ V + ++ K ++D+AF +L + ++E +VI FN +I +LC+ D A +ME+ G P + TY+SLI CL G + DA LL+ M + I P+ T +I+ K G A + D M R + P + YN +I ++ +A MF M+ PD Y T+I GF + RV + LF EM + + +YT LI GL D ++M+ DG+ P+ + Y+ L+ + E A + D M +++I+ D+ Y +++ G ++ W LF L +LK ++ PN+ YN +ISG C +Q+AY + M+++G LP+ T+ L+ H++ G+ + L +M +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA---------------AKIEADVVI----------------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW------------DLFCSL-------------------------SLKGVK--------PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528 HSP 2 Score: 201.06 bits (510), Expect = 8.725e-53 Identity = 139/535 (25.98%), Postives = 239/535 (44.67%), Query Frame = -2
Query: 1929 WYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRS 3533
+ +N L+ + + + I + + M +R L+ Y L C++ + A +L GKM G+ +SL+N YC G+++ A+ + +M++MG RPD+ T+ TLIHG L ++M+++G QP++VT+ V+++ C+ G +D A LLN M + + + + +I SL K + +A ++ M G+ P+ V + L+ L + Q + +IE+ + NL V FN LI A ++ + A D M P +FTYNSLI + A+ + M ++ FPD T +I CK +E ++ +M RG+ Y +I LF A +F +M+ GV PD + Y +++G NNG++ +A +F M + I+ + YT +I G+ K D G + G+ PN V Y ++IS KR + A+ L+ M + D Y +L+ R
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI---------------------------SCLCSYGRWSDASQLLSDMIEKKINPNL----VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513 HSP 3 Score: 199.519 bits (506), Expect = 2.969e-52 Identity = 139/525 (26.48%), Postives = 244/525 (46.48%), Query Frame = -2
Query: 1140 FNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFM------PNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 2696
FN L+SA+ + + D +KM+ LG L+TYN LI C ++ A +LL +M G P T ++N +C + A ++DQM + G +P + +I LF K SEA A+ RM++ G P+ + Y ++NG G + A L ++M A I + +I L K D ++M G+ PN V Y+SLIS + A +L+ M +I +L+ + +L+ F ++ G EKL + ++S+ P ++ +S C +L + + FM P+L YN +I GFC++ R++D + F M G++ + VT+T L+ G G+ D+A +F +M +DG PD + Y IL++GLC +L +AL + M K + Y +++ C + + +F + + P + N ++ LC ++ L+EA + + + G P T + I+ + ++ SA+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF------------VKEGKFVEAEKLHDDMIKRSIDP---DIFTYNSLINGF-CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521 HSP 4 Score: 182.956 bits (463), Expect = 9.484e-47 Identity = 135/599 (22.54%), Postives = 248/599 (41.40%), Query Frame = -2
Query: 1368 PSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCF---------------ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3119
PS+ F+ ++S + K D L M ++ N + Y +LI + ++I+ A +M+ G P V L+ Y G + A V L++++++ + F LI L + A +D+M GC P L TY ++ L ++G + A +LLN+M+A I D II+ CK+ +++ A ++ +ME +G++P V Y+ +I L + S+A+ + M+E ++P+ + + +I+ F G+ +EA++L +MI +I P +Y +LI+G + DK E M+ P+ Y +LI F + + E L M + D + Y +L+ G + G +K+F+ + VSD P + + AL++ ++++ ++Y+Y +I G C+A ++ D +D F + +GV PN VT+ ++ G + A L KM DG PD Y L+ + + L+ M + T ++ D L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA-------------------------------VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD------------GDCDNAQKVFKQM-------------VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 550 HSP 5 Score: 175.252 bits (443), Expect = 3.274e-44 Identity = 131/512 (25.59%), Postives = 224/512 (43.75%), Query Frame = -2
Query: 2205 NSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLL---CSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEM 3731
N ++ C C+ ++ A L +++ +P+ L LL C +R DA +M+ + + LI GL EA+ + D M +R P L Y + GLCK+G + A +L KME+ D ++ ++I+ CK R + AL ++ M G RP+ TY++LI G + L + M+E+ + P++VTF+ +I + +EGK A L ++MI +++ P+ Y LI +R+ +A++ +E M++ PD + L+K + K ++ + + ++ G D V + LI L D+A +M S G P + TY+ L+ L G E A + + MQ I D +I CK G ++ +D+ + +G+KP V YN +I L ++ + EA A+ +M E G PD Y T+I +G + L EM
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-------------------------------VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526 HSP 6 Score: 152.91 bits (385), Expect = 5.118e-37 Identity = 125/541 (23.11%), Postives = 234/541 (43.25%), Query Frame = -2
Query: 2415 FSLCLSFSEQLINRGLLSS--ARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCW----YYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFD----PLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQM 4007
F L +S E++ G+ + + S +S AL+ + + G + + T + L+ + A + D ++ G PD+ +++ L K EA L DR+ V GC Y V+++GLC++G ++ A + + M E + + ++ ++ LCK V +A +LF +ME++G + Y+SLI+ C + A ++ M++ P+ T+N LI FVK G F L + M+++ + P + T++ +I+ +C ++D A + M+SK+ P+ Y LI K R+ + E + M + GLV D V + L++ + D A V K + +G D +LL N +K + + + + KS + L + +I +C+ + D + G P + TYN++I L K L ++A +LL +M+ G PD T +I H + G+ + +++ +M
Sbjct: 26 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM--------------------------------------VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526 HSP 7 Score: 139.428 bits (350), Expect = 1.017e-32 Identity = 120/485 (24.74%), Postives = 200/485 (41.24%), Query Frame = -2
Query: 2838 LPLDPSYATISSI-----PADHFSLCLSFSEQLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFY---------SDYII-------------------------GRGIIPDSSIANSIVICLCKLGKLEEAT-ILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLI-----------------------------------NVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFM 4058
L +PS T+SS+ S ++ +Q++ G F ++ + S+A++ VD + RG +L TY V++ L + G + LA++ +D +I +GI P+ +S++ CLC G+ +A+ +L D + + FNAL+ + +F++A MI +++ + YN LI+G C L++A QMF+ M + + P L Y +L G CK V + LF +M +G D YT+LI + C K++ AL V+ M K + D Y Y T+I G K G D GW LF + +G++P+VVT++ MIS C + + A LL M P++ Y LI + ++ + E M + V D + M G LD +F+
Sbjct: 74 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT-FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG-RLDKSFL 555
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 2.517e-57 Identity = 147/611 (24.06%), Postives = 275/611 (45.01%), Query Frame = -2
Query: 1389 SYTYNTLIHGFVKMGL-FDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQ 3218
SY Y + V + L D LF +M++ PS+V F+ ++S + K D L M + ++ + + Y +LI + +++ A +M+ G PD V L+ Y G + A V L++++ V FN LI L + A +D+M + GC P LFTY +++ L ++G + A SLL +M+ I D II+ C + N+ A ++ +M+++G++P V YN +I L + S+A+ + M+E ++P+ + + +I+ F G+++EA++L+ EMI +I P +Y++LI+G + D+ E M+ PN V Y +LI F + + E L M + + + + Y +L+ G +++ G +K+F+ + VSD P P++ Y++++ G C+ +++ A FE +QK + P+ T+ I++ G KAG+++ LF ++ G P+ I+Y +++G C+ EA +L M + G +P+ GTY +++
Sbjct: 44 SYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA-------------------------------VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA------------GDCDMAQKIFKKM-------------VSDGVP--------------------PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578 HSP 2 Score: 200.675 bits (509), Expect = 3.416e-52 Identity = 143/544 (26.29%), Postives = 247/544 (45.40%), Query Frame = -2
Query: 1140 VILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKE-------KNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 2750
V L E+++S + V FN L+SA+ + + D ++M++L L++YN LI C ++ A ++L +M G PD T ++N +C + A ++DQM +P +N +I LF K SEA A+ RM+ G PD Y T++NG G + A L +M I YT +I L + +M + G+ PN V Y SLI + A RL+ M +I +++ + +L+ F ++ G EKL+ + ++S+ P + D EA F L + + PN+ YN +I GFC+A R+++ + F M + G++ N VT+ L+ G +AG+ D A +F KM +DG PD I Y IL++GLC+ +L +AL + + K + P TY I+++ C + + +F + + P + ++ C + EA ++ + + G P T + I+ + ++ SA+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF------------VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC-----FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591 HSP 3 Score: 189.504 bits (480), Expect = 1.534e-48 Identity = 158/574 (27.53%), Postives = 245/574 (42.68%), Query Frame = -2
Query: 2205 LDLDLSTYAVLIKKLVQSGHLPLAYSFYS-----------DYIIGRG-------IIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLL---CSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEM 3863
LDL L L ++VQS LP F D +I G I D N ++ C C+ +L A + +++ +P L LL C +R +A +M + +N LI GL EA+ + D M R P L Y ++ GLCK+G + A SL KME D +YT++I+ C + + AL ++ M G RP+ TYN+LI G + L + M+E+ + P+VVTF +I + +EGK+ A L + MI +++ P+ Y+ LI +R+ EA+ +E M++ P+ V + L+K + K ++ E +E L E+ + L V +N LI L + D A KM S G P + TY+ L+ L + G E A + +Q + PD T I+I CK G +E +D+ + +G+KP V IY +I R+ EA A+F M E G P+ Y T+I +G + L EM
Sbjct: 57 LDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGY--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE--------------------------EGME-----LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596 HSP 4 Score: 156.377 bits (394), Expect = 5.909e-38 Identity = 91/348 (26.15%), Postives = 178/348 (51.15%), Query Frame = -2
Query: 2880 SPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP---AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLM 3914
+ S+A++ +D + +RG DL TY ++ L + G + LA S G+ I D I +I+ LC + +A LF + DN +P +N+L+R LC+ R+ DA MI +N ++ LID ++G L EA +++D M +R+ P + Y SL G C + EA+ +F M S+ F + Y +LI +CK ++++ + ++ M + G ++ TYNTLI G + G D +F +M+ G+ P ++T+ +++ C+ GK++ A ++ + + P+ + Y ++I + K ++ + + + + G+ P+ +++ ++
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542 HSP 5 Score: 83.1889 bits (204), Expect = 1.056e-14 Identity = 59/203 (29.06%), Postives = 96/203 (47.29%), Query Frame = -2
Query: 3279 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP---AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGR 3878
++ RGL + TY LI+ L Q+G +A + ++ G+ PD + ++ LCK GKLE+A ++F+ L S +P +N ++ +C + D +D F + V Y +I G C+KG EEA +F M E +LP Y +L + G + L +M S GF D + + +IN+ GR
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK-MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGR 619
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.635e-57 Identity = 144/540 (26.67%), Postives = 245/540 (45.37%), Query Frame = -2
Query: 2025 AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAV---LYTSLISNFLQKREF 3635
+ ++ C + AF K+I + ++ LI+GLC +G + EA+++ D M E PTL +L GLC G V +A L +M GF ++ Y ++ V CK + +A+ + +M + + D+ Y+ +I G K G D + LFN+M +G + ++ + +I +C G+ D + LL +MI + + P+ ++ LI KE ++ EAEE ++ M+ G+ PD V + L+ + K +LD A +L + GCG N+ FN+LI+ C+ D KM G + TYN+LI+ + G E A+ L M ++ + PD + I+++ C +G E A +I +++E M+ + IYN II + KV +A +F + GV PD Y MI G G + EAD LF +M P +Y LI + + K +E++ G +A + ++S+ K+ F
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK-PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---------------------------PNIR----TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616 HSP 2 Score: 203.371 bits (516), Expect = 4.715e-53 Identity = 148/601 (24.63%), Postives = 267/601 (44.43%), Query Frame = -2
Query: 1368 LFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV------SDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3152
LF +M +P ++ F + S R + D L M K +A N + +++I + +++ A +++ G PD V F L +NG L L +E LE L++ +++ + N L++ LC + A +D+M G P TY ++K + + G A LL +M+ + I D III+ CK G+L+ AF++ ++ME +G K + IY +I + + + M++ + PD + + +I+ F G++ EA+ L EMI I P + +YT+LI G K+N DK L+ M+ G PN + LI+ + + + L M + D + Y +L+ GF G ++LFQ + + + P + ++ + PE AL++ +K+++++ ++ +YN+II G C A ++ DA+D F + +GV P+ T+ I++GG K G + A LF KM DG +P+G Y IL+ ++ L+ + + G T ++++ D L
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTL---------------------ING-----LCLEGRVSEALE-----LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF------------CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK----ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612 HSP 3 Score: 174.481 bits (441), Expect = 1.116e-43 Identity = 130/538 (24.16%), Postives = 239/538 (44.42%), Query Frame = -2
Query: 1989 EEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFD---------------------------------PLLLPVSA------NEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDR 3485
++A+ +F M R+ P L + LF + + L +ME +G + + +IN C+ RK+ +A +++K+G PD+ T++TLI+G G L ++M+E G +P+++T + +++ C GKV A +L++ M+ PN Y ++ + K + A E +M + D V + ++ K LD AF + + + G D P ++ SA E ++ L +E+++ + V + LI C++ Q D A++ +D M S GC P + T+N LI + L +D L +M +G+ D T +I C+ G LE A ++ +M R ++P + Y ++ L + +A +F ++ +S ++ D IY +I+G N +V +A LF + ++P +Y +I GL KK + KM +DG PN Y LI L + + + +L++ + R
Sbjct: 54 DDAVDLFQEMT-RSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590 HSP 4 Score: 173.326 bits (438), Expect = 2.585e-43 Identity = 131/535 (24.49%), Postives = 244/535 (45.61%), Query Frame = -2
Query: 1176 EQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFM------PNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKT 2762
E V L +E+ +S + F+ L S + Q D +ME G L+T + +I C + A S + ++ G PD T +IN C G + A +++D+M + G KP + N ++ L KVS+A + RM+E+G P+E+ Y ++ +G+ A L +M I+ + Y+ +I GL K D +M G + ++YT+LI F ++ +L+ M + +I D++ + +L+ F ++ G R E+L + + ++ + P V+ +S C +L + M PN+ +N++I+G+C+A+ + D + F M GV+ + VT+ L+ G + G+++ A LF +M + PD + YKIL++GLC +AL + + K + G Y II+ C++ A+ +F + + P + N ++ LC + L EA +++ + + G P T ++ I+
Sbjct: 53 EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF------------VKEGKLREAEELHKEMIQRGISPDT----VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571 HSP 5 Score: 165.236 bits (417), Expect = 9.368e-41 Identity = 124/503 (24.65%), Postives = 230/503 (45.73%), Query Frame = -2
Query: 2403 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLL-TDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRG 3908
+S A S + + G + D T++ LI L G + A D ++ G P N++V LC GK+ +A +L DR++ T + + +++++C + A + KM + L Y+++IDGLC+ G L+ A +F+ M E + +Y +L G C G + L M + D +++LI+ + K K++ A ++ M++ G PD+ TY +LI GF K D + + M+ +G P++ TF+++I+ YC+ +D L M + + + Y LI + ++ A+E ++ M++ + PD V + I L+G + N E E+ + I E+I KS + L +N++I +C ++ D A + G P + TYN +I L +KG +A+ L +M+ G P+ T I+I H G+ + ++++++ G
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV-DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY---------------------KILLDG---------LCDNGEPEKALEIF-EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592 HSP 6 Score: 164.081 bits (414), Expect = 2.390e-40 Identity = 129/522 (24.71%), Postives = 231/522 (44.25%), Query Frame = -2
Query: 1182 AKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLP-------------KEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFI 2708
KV++ + + ++D A +M P L ++ L +++ ++ L +M+ +GI + T I+IN C+ L AF + ++ G +P ++ +I L + +VSEA + RM+E G P I ++NG NG+V +A L M+ +P +Y ++ + K T L KM + + +AV Y+ +I + + AF L + M+ + D+I Y +L+ GF + RW KL + + ++ + P KE LR ++ +L +++ Q P+ Y +I GFC+ +++ A +LM +G PN TF IL+ G+ KA ID + LF KM+ G D + Y L+ G C+ +L A L M R + P +Y+I+L CD+ A +IFE++ + N ++ +C K+ +A ++ S+ +G P T ++ I
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA----GRW--------DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE-----------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534 HSP 7 Score: 131.339 bits (329), Expect = 5.507e-30 Identity = 95/393 (24.17%), Postives = 171/393 (43.51%), Query Frame = -2
Query: 2862 RVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEE-ATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPD--SYT---------------------------------YNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKG 3932
+V+ S + A+ + + R + LD Y+++I L + G L A++ +++ I +G D I +++ C G+ ++ A +L D + + + AF+AL+ + + +A + +MI ++ Y LIDG C++ L++A M DLM + P + + L G CK + + LF KM +G D Y +LI +C+ K+++A ++ M+ RPD SY YN +IHG D W LF + +G++P V T+++MI C++G + A +L M +PN Y +LI + E T++ + E + G D ++ M G
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG-PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610 HSP 8 Score: 90.8929 bits (224), Expect = 3.932e-17 Identity = 93/401 (23.19%), Postives = 167/401 (41.65%), Query Frame = -2
Query: 1095 EADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAR--EKLFQLLHRQSLLPKEK-------NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFI-------------KTFRKW*ERWTSADGNVGIKLLIPLFCWL 2231
+A LF EM + RP ++ L S + + D ++M G+ N + +I+ + R+ AF + + + E D + + +L++G R SE +++ ++ H+ +L+ N +VSD A+ LI ++ +T F PN Y ++ C++ + A + M++ + + V ++I++ G K G +D+A LFN+M G D I+Y L+ G C A R + LL M KR + P + ++ F A ++ +EM+ P L+ C + +L +A + D ++ +G P T ++ I + FRK R AD V LI FC L
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE----------GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD---------AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCEL 435
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 5.762e-57 Identity = 180/699 (25.75%), Postives = 297/699 (42.49%), Query Frame = -2
Query: 1932 LINRGLLSSARKLFQRVVSNSSPV------------SDALSTVDF-----VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYR 3977
L++ LLS+AR + R+++ + PV +DA++++ + + DL + Y K+ LA + + +G+ P + N ++ L + + ++ FD + S + F + C + +A F KM V +N +IDGL G +EA + M ER PTL Y L GL + + +A + +M +GF + +Y +LI+ + + + A+ + M+ G S TYNTLI G+ K G D L +M+ G + +F +I C D A + M+ +N++P T LI+ L K + ++A E + + LN G V D L+ + +LD AF + K I GC D +V++N LIS C + + D A F+D+M G P +TY+ LI L E+A + + G+ PD T ++I+ CK E + D+M + ++P +YN +I + R ++S A + M G+ P+ Y ++I G S RV EA LF EM + P YTALI G K K L +M + PN + YT +I + + A RL++ M I D I Y + G+ +
Sbjct: 149 LLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKR----DGCYLALDVFP-VLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD-------------------------------RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810 HSP 2 Score: 199.519 bits (506), Expect = 4.546e-51 Identity = 171/671 (25.48%), Postives = 286/671 (42.62%), Query Frame = -2
Query: 1338 VDKTMYTSLINVYCKGRKMK---MALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERARE--KLFQLLHRQSLLPKE--KNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEE 3329
+ + M LI VYC K +AL V+ + G P T N L+ V+ F F+ ++ +G+ P V F I+ +C+ GKV+ A L + M +APN + +I L R EA F E+M+ G+ P + + L+K + + A+ VLK + G F P + + +N LI + E + A D M S G TYN+LIK + G ++AE LL M + G +Q + +I C H + A + +M R M PG + +I L + K S+A ++ + L G D +++G G++ EA R+ E++G SY LISG K D+ +L++M+ GL P+ Y+ LI + E A + D RN + D+ Y ++ G ++ ER E + F + +++ P N + AL+L + +K PN Y +I G R+++A FE M+ EG+ PN +T L+ G+ K G++ L +M++ P+ I Y +++ G + + EA LL+ M ++G++P TY+ + + + AFK +E
Sbjct: 199 IRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG--FPPNV-----------------------------IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA--------------ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823 HSP 3 Score: 192.971 bits (489), Expect = 5.091e-49 Identity = 154/600 (25.67%), Postives = 261/600 (43.50%), Query Frame = -2
Query: 2190 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP--AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTS-----------------------------------LINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAI 3878
V +G+ D+ + I + G + A +S + G+ P+ N+++ L G+ +EA +F + + E ++ LV+ L +R DA+ +M YN LID + G L +AI++ DLM + SL T Y +L G CK G AE L +M S GF V++ +TS LI+ CK K AL ++++ L G D+ T N L+HG + G D + + +++ +G V+++ +IS C + K+D A M L+ M+ + L P+ + Y++LI L+ N++ EA +F++ G++PD + ++ ++GC EE ++ +E++ N+ V +N LI A C + A + M+ G P TY SLIK +S E+A+ L M+ +G+ P+ +I+ + K G + +L +M + + P Y +IG R V+EA+ + M E G+ PD I Y I G+ G V+EA + E AAI
Sbjct: 264 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK-MEEAGVAPNVVTFNTVIDGLGMCGRYDEA-FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL-TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY---------------------SVMIDGC------CKAERTEEGQE----FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 829 HSP 4 Score: 150.984 bits (380), Expect = 1.427e-35 Identity = 124/547 (22.67%), Postives = 236/547 (43.14%), Query Frame = -2
Query: 1071 AKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTR-FMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSADGNVGIKLLIPLFCWLQEQRAKDI 2708
+K N+L+++L + D + G P ++ + + I + G E+A L ++M+ G+ P+ T +I+ G + AF ++M +RGM+P + Y+ ++ L R K++ +A + M + G P+ I+Y +I+ F G + +A + M+ + TS +Y LI G K D L++ML G N +TS+I F+ A R V M + +L+SG + K A E FQ L++ ++ + + EA K IQK R + + YN +ISG C ++ +A+ + M K G+ P+ T++IL+ G +++ AI ++ +G PD Y ++++G C+A R E M + + P+ Y +++ +C S A ++ E+M P L+ + + ++ EA ++++ + G P + I DG + ++ + C L+E +K++
Sbjct: 238 SKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK-----------ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI-------------DGYGKLGQMVKVECLLREMHSKNV 759 HSP 5 Score: 138.272 bits (347), Expect = 1.241e-31 Identity = 102/447 (22.82%), Postives = 195/447 (43.62%), Query Frame = -2
Query: 1209 QGIFPDQATCLIIINEHCKHGNLEP---AFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCF---------ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 2513
+G+FP + TC I++ + + AFD++ +G+ P V ++ I + + KV EA +F +M E+GV P+ + + T+I+G GR EA +M+ + PT +Y+ L+ GL + L++M G PN ++Y +LI +F++ A + DLM + Y +L+ G+ ++ +ER +++ + V+ S ++ C AL+ + ++ P L +ISG C+ + A + + +G + + T L+ G +AG++D A + ++ GC D + Y L++G C +L EA L M KRGL P TY I++ + A + +++ P +Y + ++ C ++ E +D ++ + P
Sbjct: 233 KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC----KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN--------GQADNAERLLKEMLSI-----------GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 7.427e-57 Identity = 139/508 (27.36%), Postives = 235/508 (46.26%), Query Frame = -2
Query: 2100 LVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKM 3623
++ C + AF K+I + ++ LI+GLC +G + EA+++ D M E P L +L GLC G EA L KM G + Y ++NV CK + +A+ + +M + + D+ Y+ +I G K G D + LFN+M +G+ +++T++++I +C G+ D + LL +MI + + PN ++VLI S KE ++ EAEE ++ M++ G+ PD + + L+ + K LD A ++ + GC DP N+ FN+LI+ C+ + D KM G + TYN+LI+ + G A+ L M ++ + P+ T I+++ C +G E A +I +++E M+ + IYN II + KV +A +F + GV P Y MI G G + EA+ LF +M P +Y LI + K +E++
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK-PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC--DP-------------------------NIR----TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604 HSP 2 Score: 209.149 bits (531), Expect = 6.901e-55 Identity = 148/600 (24.67%), Postives = 270/600 (45.00%), Query Frame = -2
Query: 1368 LFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV-----SDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3152
LF M+ P+V+ F + S + + D L M K +A N + +++I + ++ A +++ G P+ + F L +NG L L +E LE L++ +++ + N L++ LC ++ A +DKM GC P TY ++ + + G A LL +M+ + I D III+ CKHG+L+ AF++ ++ME +G+ + YN +IG + + + M++ ++P+ + + +I+ F G++ EA+ L EMI I P + +YT+LI G K+N DK ++ M+ G PN + LI+ + + + L M + D + Y +L+ GF G ++LFQ + + + P ++ D+ E+ K AL++ +K+++++ ++ +YN+II G C A ++ DA+D F + +GV P T+ I++GG K G + A LF KM DG PDG Y IL+ +++ L+ + + G T ++++ D L
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL---------------------ING-----LCLEGRVSEALE-----LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF------------CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG-ESEK--ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628 HSP 3 Score: 170.629 bits (431), Expect = 2.162e-42 Identity = 118/494 (23.89%), Postives = 221/494 (44.74%), Query Frame = -2
Query: 2007 EEAIQMF-DLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRL 3485
++AI +F D++ R LPT+ + LF + K +L +ME +G + + +IN +C+ RK+ +A +++K+G P++ T++TLI+G G L ++M+E G +P ++T + +++ C GK A +L++ M+ PNA Y ++ + K + A E +M + D V + ++ K LD AF + + + G + +N+ + +N+LI C + D + + M P + T++ LI ++G +AE L M +GI PD T +I+ CK +L+ A ++D M +G P + +N +I + ++ + +F +M GV D + Y T+I GF G++ A LF EM+ + P +Y L+ GL ++K EK+ + + +Y +I + + A+ L
Sbjct: 70 DDAIDLFRDMIHSR--PLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG---------------------------ITTNI----ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530 HSP 4 Score: 168.318 bits (425), Expect = 9.849e-42 Identity = 126/508 (24.80%), Postives = 224/508 (44.09%), Query Frame = -2
Query: 1176 AFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKT 2699
+++I+ C + A M K+ LG P T+++LI L +G +A L++RM G PD T ++N C G A ++D+M + G +P Y ++ + + + + A + +M E + D + Y +I+G +G + A LF+EM I +Y LI G D G L M+ + PN V ++ LI +F+++ + A L M I D I Y SL+ GF + E +K Q++ +L VS PN+ +N++I+G+C+A+R+ D + F M GV+ + VT+ L+ G + G+++ A LF +M + P+ + YKIL++GLC +AL + + K + G Y II+ C++ A+ +F + + P + N ++ LC + L EA +++ + + G P T ++ I+
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK---------------ENHLDKANQMV----------DLMVSKGCD--------------------PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587 HSP 5 Score: 166.392 bits (420), Expect = 3.891e-41 Identity = 127/516 (24.61%), Postives = 232/516 (44.96%), Query Frame = -2
Query: 2358 ALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPA--FNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSL 3899
A S + + G + + T++ LI L G + A D ++ G PD N++V LC GK EA +L D+++ + C+ A + ++ ++C + A + KM N+ L Y+++IDGLC+ G L+ A +F+ M E + Y L G C G + L M + + ++ LI+ + K K++ A ++ M+ G PD+ TY +LI GF K D + + M+ +G P++ TF+++I+ YC+ ++D L M + + + Y LI + ++ A+E ++ M++ VP +++ +K+ LL + N E E+ + I E+I KS + L +N++I +C ++ D A + G P + TYN +I L +KG +AE L +M+ G PD T I+I H G+ + ++++++ G + +I L
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV-DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKI-----------------------------LLDGLCDNGESEKALEIF-EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623 HSP 6 Score: 120.939 bits (302), Expect = 1.452e-26 Identity = 95/355 (26.76%), Postives = 148/355 (41.69%), Query Frame = -2
Query: 2862 NSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP--AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKG 3920
N+ D + + R ++ ++ T++VLI V+ G L A + + +I RGI PD+ S++ CK L++A + D L+ C+ FN L+ C R D + F KM V YN LI G C+ G L A ++F M R + P + YK L GLC G +A +F K+E K KM L D YN +IHG D W LF + +G++P V T+++MI C++G + A +L M AP+ Y +LI + + T++ + E + G D ++ M G
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE-MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIE----------------------KSKMEL-------------DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626 HSP 7 Score: 97.8265 bits (242), Expect = 2.959e-19 Identity = 101/421 (23.99%), Postives = 181/421 (42.99%), Query Frame = -2
Query: 1017 EADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAR--EKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFI-------------KTFRKW*ERWTSADGNVGIKLLIPLFCWLQE-QRAKDIMA*CQWSVIEDVPEGILS 2231
+A LF +MI + PT ++ L S + K D ++M G+ N + +I+ F + R+ AF + + + E + I + +L++G R SE +++ ++ H+ L+ N V+ + A+ LI K+ + PN Y +++ C++ + A + M++ + + V ++I++ G K G +D+A LFN+M G T + I Y IL+ G C A R + LL M KR + P+ T+ +++ F A ++ +EM+ P L+ C + L +A + D ++ +G P T ++ I + FRK R AD V LI FC L + AK++ Q V VP I++
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE----------GRVSEALELVDRMVEMGHKPDLITI--NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD-TVTYNTLIQGFCELGKLNVAKELF---QEMVSRKVPPNIVT 475
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=3 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.050e-56 Identity = 186/812 (22.91%), Postives = 346/812 (42.61%), Query Frame = -2
Query: 1209 FNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPE--RTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRV-SDSSPEAMKCFA-LKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 3632
++ L+R+ + D+ + F M N + N ++ + + G E + ++ + E + + P + + L LC +G ++ L KME G+ Y ++++ YCK + K A+ + M G D TYN LIH + G++L M ++ + P+ VT++ +I+ + EGKV AS LLN M+S L+PN + LI E EA + + M GL P V + L+ K E D+A + NG + + ++ + +I LC+ D A +++M G P + TY++LI + G F+ A+ ++ R+ G+ P+ +I C+ G L+ A I + M G +N ++ SL + KV+EA M G+ P+ + + +ING+ N+G ++A +F EM PT +Y +L+ GL K + +L+ + + V+Y +L++ + A L M + I D Y SL+SG R K A+ E R ++LP + D +A + A + +++ P++ N +I G+ +++ D M + PN T+ IL+ G+ K ++ + L+ + +G PD + LV G+C+++ L L +L RG+ + T+ +++ C + AF + + M C+ ++ +L + +E+ +V + ++G P
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG-------------------------------VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR---KGKTVIAILFAKEAEA--------RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 892 HSP 2 Score: 215.312 bits (547), Expect = 2.304e-55 Identity = 216/951 (22.71%), Postives = 380/951 (39.96%), Query Frame = -2
Query: 1140 SARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKP---AFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILK----SNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLES--GVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRS----ISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 3953
S + RV + D+L + G + + T ++ +V+SG +SF + ++ R I PD + N ++ LC G E+++ L ++ + S P +N ++ C + RF A + M + V+ YN+LI LC+ + + + M +R P Y +L G +G V+ A L +M S G + + +LI+ + K AL+++Y M G P +Y L+ G K FD + +M G+ +T+ MI C+ G +D A +LLN M + P+ Y+ LI K R A+E R+ GL P+ +++ L+ + L A + +A+ L G D V + V EE ++ + V+F+ LI+ + A D+M +G P FTY SL+K L + G +AE L + A D ++ CK GNL A + +M R + P Y +I L R+ K A +F + E+ V P++++Y ++G G+ +M P + A+I G + +K L +M + PN Y L+ + ++++ +F L + N I D + SLV G S I + + RG E R N+ +S +A L++ + + + ++S R Q++ M K+G+ P + L+ G + G+I A + +M A P + +V L + + EA LL M K L+P+ ++ ++ C + + A ++ M L N L+ LC + + A +Y+ + G T I+ ++ AD
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE-MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM--EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH-PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF--------------NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGAD 1055 HSP 3 Score: 209.92 bits (533), Expect = 1.080e-53 Identity = 175/698 (25.07%), Postives = 307/698 (43.98%), Query Frame = -2
Query: 1926 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL-LTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMG-------------------------------LFDYG-W---VLFNQMMEQ-GLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSI 3908
+ +A+ ++ ++ G+D D+ TY+ LI + G A I G+ P+ I ++++ C++G L+EA +++ + L ++ + FN LV LC + +A ++ M + + ++ LI+G G +A +FD M + PT Y SL GLCK G + EAE + + VD MY +L+ CK + A+ ++ M++ PDSYTY +LI G + G +F G W + F + M+ G P +VT + MI Y R GK++ + LL M ++N PN Y +L+ K ++ + Y ++ G++PD + L+ + L+I +LKA G D + FN+LIS C + + A + M SLG T ++++ L++ F+++ +L+ M QGI P+ + +IN C+ G+++ AF + ++M + P + ++ +L + K EAT + ML+ + P + T+++ NG VIEA L M ++ SY LI+GL K E+M DG + NA Y +LI L + E AF D++ ++ + R I +SL +R++
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD-------------------------------RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR---ETAFSGADIILKDLLARGFITSMSLSQDSHRNL 1080 HSP 4 Score: 202.986 bits (515), Expect = 1.542e-51 Identity = 165/679 (24.30%), Postives = 303/679 (44.62%), Query Frame = -2
Query: 1182 LIHGFVKMGLFDYGWVLFNQMMEQG--LQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERM-LNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCF--ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKY-PYKPTKSLFI 3200
L+HG K+ L WV+ +E +Q +T H+++ R D A +L + S ++ + L+T+ N + R+ L G++ D + F+LM +Y + +L ++ V + E++ + ++E+LK + FN+LI+ LC + + +SY M KME G P + TYN+++ +KG F+ A LL+ M+++G+ D T ++I++ C+ + + +L M R + P YN +I + KV A+ + ML G+ P+ + + +I+G + G EA ++F+ M + P+ SY L+ GL K D + +M +G+ + YT +I + + A L++ M ++ I+ D++ Y +L++GF + G + +++ ++R L P + M C A+++ + + + + +NV+++ C+A ++ +A + M +G+LPN V+F L+ G+ +GE A +F++M G P Y L+ GLC+ L EA L +H Y +L C S A +F EMV S P Y L+ LC + K A + RG P K + F+
Sbjct: 47 LVHG--KLALKFLKWVVKQPGLETDHIVQLVCITTHILV----RARMYDPARHILKEL-SLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV-------------VKSGEDVS--VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV------------GRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 691 HSP 5 Score: 199.519 bits (506), Expect = 1.709e-50 Identity = 172/717 (23.99%), Postives = 306/717 (42.68%), Query Frame = -2
Query: 1218 DKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVL-----KAIALNGCGFDPLLLPVSANEELEQKIVI---LIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAM-----KCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEG-VLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRG 3326
+ ++Y LI VY + ++ +L ++ M G P YT N ++ VK G W +M+++ + P V TF+++I+ C EG + +S L+ M AP Y ++ K+ R A E + M + G+ D + L+ + + +++L + I N ++ L+ S E K++I L+ E+L L V FN LI + A ME+ G P +Y L+ L + F+ A RM+ G+ + T +I+ CK+G L+ A +L++M G+ P + Y+ +I + + A + R+ G+ P+ IIY T+I G + EA R++ MI ++ L++ L K + ++ M DG++PN V + LI+ + E AF + D M + Y SL+ G + G R EK + LH +P + + ++ AM A+ L ++ Q +P+ Y Y +ISG C + A + + G VLPN+V +T + G KAG+ I +M+ G TPD + +++G + ++ + LL M + P+ TY I+L + +F ++ +++ P C+ L+ +C L + + I RG
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN----EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG------------GHLREAEKFLKSLHA---VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819 HSP 6 Score: 64.3142 bits (155), Expect = 9.622e-9 Identity = 43/187 (22.99%), Postives = 81/187 (43.32%), Query Frame = -2
Query: 1173 NLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 1733
N +Y+++I + +QD+ + F LM G P+ T ++G +K+GE +M PD + IL+N LC ++ L+ M K G P+ TY +L ++C A ++ + M + N L+ LC ++ + ++ + +R +P + T + I F
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.225e-56 Identity = 152/612 (24.84%), Postives = 263/612 (42.97%), Query Frame = -2
Query: 1539 EAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNA 3374
+A LFG M + L++ K +K + + + +M ++ YTYN LI+ F + L +MM+ G +PS+VT +++ YC ++ A L++ M+ P+ +T LI L+ N+ +EA +RM+ G P+ V + ++ K + D+A +L + ++E +VI FN +I +LC+ D A +ME+ G P + TY+SLI CL G + DA LL+ M + I P+ T +I+ K G A + D M R + P + YN ++ ++ +A MF M+ PD + Y T+I GF + RV + LF EM + + +YT LI GL D ++M+ DG+ P+ + Y+ L+ + E A + D M +++I+ D+ Y +++ G ++ W LF L +LK ++ PN+ YN +ISG C +Q+AY + M+++G LPN T+ L+ H++ G+ + L +M +
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA---------------AKIEADVVI----------------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW------------DLFCSL-------------------------SLKGVK--------PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603 HSP 2 Score: 202.986 bits (515), Expect = 6.904e-53 Identity = 139/518 (26.83%), Postives = 249/518 (48.07%), Query Frame = -2
Query: 1995 YNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMK------MYPKGYELDIAFMVLKAIALNGCGFDPLLLP-VSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLM 3527
+N L+ + + + I + + M +R E + L+ Y L C++ + A +L GKM G+ +SL+N YC G+++ A+ + +M++MG RPD+ T+ TLIHG L ++M+++G QP++VT+ V+++ C+ G D A LLN M + + + + +I SL K + +A ++ M G+ P+ V + L+ + +L ++ M+ K I N F+ L+ V + +E + L ++++K ++ +N L++ C + D A + M S C P + TYN+LIK + ED L M +G+ D T +I G+ + A + QM G+ P + Y+ ++ L K+ +A +F M +S + D IY TMI G G+V + LF + ++P +Y +ISGL K + + L+KM +DG +PN+ Y +LI L+ + + L+ M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKM-QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL-LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK--LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601 HSP 3 Score: 199.134 bits (505), Expect = 1.177e-51 Identity = 138/527 (26.19%), Postives = 245/527 (46.49%), Query Frame = -2
Query: 1140 VAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFM------PNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 2702
V FN L+SA+ + + D +KM+ L + L+TYN LI C ++ A +LL +M G P T ++N +C + A ++DQM + G +P + +I LF K SEA A+ RM++ G P+ + Y ++NG G A L ++M A I + +I L K D ++M G+ PN V Y+SLIS + A +L+ M +I +L+ + +L+ F ++ G EKL+ + ++S+ P ++ +S C +L + + FM P++ YN +I GFC++ R++D + F M G++ + VT+T L+ G G+ D+A +F +M +DG PD + Y IL++GLC +L +AL + M K + Y +++ C + + +F + + P + N ++ LC ++ L+EA + + + G P T + I+ + ++ SA+
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF------------VKEGKFVEAEKLYDDMIKRSIDP---DIFTYNSLVNGF-CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596 HSP 4 Score: 187.193 bits (474), Expect = 8.580e-48 Identity = 137/610 (22.46%), Postives = 254/610 (41.64%), Query Frame = -2
Query: 1368 LFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCF---------------ALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYL 3152
LF M++ PS+V F+ ++S + K D L M + + Y +LI + ++I+ A +M+ G P V L+ Y G + A V L++++++ + F LI L + A +D+M GC P L TY ++ L ++G + A +LLN+M+A I D II+ CK+ +++ A ++ +ME +G++P V Y+ +I L + S+A+ + M+E ++P+ + + +I+ F G+ +EA++L+ +MI +I P +Y +L++G + DK E M+ P+ V Y +LI F + + E L M + D + Y +L+ G + G +K+F+ + VSD P + + AL++ ++++ ++Y+Y +I G C+A ++ D +D F + +GV PN VT+ ++ G + A L KM DG P+ Y L+ + + L+ M + T ++ D L
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA-------------------------------VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD------------GDCDNAQKVFKQM-------------VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRL 625 HSP 5 Score: 179.104 bits (453), Expect = 4.192e-45 Identity = 137/523 (26.20%), Postives = 227/523 (43.40%), Query Frame = -2
Query: 1986 YYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAF-----MVLKAIALNGCGFDPL---LLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRN 3530
Y +L +GL L++AI +F M ++ LP++ + L + K SL KM+ Y LIN +C+ ++ +AL + +M+K+G P T ++L++G+ L +QM+E G +P +TF +I K A L++ M+ + PN Y V++ L K A +M + D V+F ++ K +D A M K I N + L L + Q + +IE+ + NL V FN LI A ++ + A D M P +FTYNSL+ + A+ + M ++ FPD T +I CK +E ++ +M RG+ Y +I LF A +F +M+ GV PD + Y +++G NNG++ +A +F M + I+ + YT +I G+ K D G + G+ PN V Y ++IS KR + A+ L+ M +
Sbjct: 53 YREILRNGL-HDMKLDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL----VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569 HSP 6 Score: 174.866 bits (442), Expect = 9.947e-44 Identity = 130/512 (25.39%), Postives = 224/512 (43.75%), Query Frame = -2
Query: 2205 NSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLL---CSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEM 3731
N ++ C C+ ++ A L +++ +P+ L LL C +R DA +M+ + + LI GL EA+ + D M +R P L Y + GLCK+G A +L KME+ D ++ ++I+ CK R + AL ++ M G RP+ TY++LI G + L + M+E+ + P++VTF+ +I + +EGK A L ++MI +++ P+ Y L+ +R+ +A++ +E M++ PD V + L+K + K ++ + + ++ G D V + LI L D+A +M S G P + TY+ L+ L G E A + + MQ I D +I CK G ++ +D+ + +G+KP V YN +I L ++ + EA A+ +M E G P+ Y T+I +G + L EM
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT-------------------------------VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601 HSP 7 Score: 150.599 bits (379), Expect = 3.703e-36 Identity = 118/509 (23.18%), Postives = 224/509 (44.01%), Query Frame = -2
Query: 2412 SPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCW----YYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFD----PLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQME 3914
S +S AL+ + + G + + T + L+ + A + D ++ G PD+ +++ L K EA L DR+ V GC Y V+++GLC++G + A+ + + M E + + ++ ++ LCK V +A +LF +ME++G + Y+SLI+ C + A ++ M++ P+ T+N LI FVK G F L++ M+++ + P + T++ +++ +C ++D A + M+SK+ P+ Y LI K R+ + E + M + GLV D V + L++ + D A V K + +G D +LL N +K + + + + KS + L + +I +C+ + D + G P + TYN++I L K L ++A +LL +M+ G P+ T +I H + G+ + +++ +M
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM--------------------------------------VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602 HSP 8 Score: 137.502 bits (345), Expect = 7.525e-32 Identity = 118/485 (24.33%), Postives = 198/485 (40.82%), Query Frame = -2
Query: 2838 LPLDPSYATISSI-----PADHFSLCLSFSEQLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFY---------SDYII-------------------------GRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLI-----------------------------------NVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFM 4058
L +PS T+SS+ S ++ +Q++ G F ++ + S+A++ VD + RG +L TY V++ L + G LA + +D +I +GI P+ +S++ CLC G+ +A+ L ++ + FNAL+ + +F++A + MI +++ + YN L++G C L++A QMF+ M + + P + Y +L G CK V + LF +M +G D YT+LI + C K++ AL V+ M K + D Y Y T+I G K G D GW LF + +G++P+VVT++ MIS C + + A LL M PN+ Y LI + ++ + E M + V D + M G LD +F+
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT-FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG-RLDKSFL 630
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Match: PPR77_ARATH (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 3.024e-56 Identity = 181/795 (22.77%), Postives = 345/795 (43.40%), Query Frame = -2
Query: 1380 KLGKLEEATILFDRLLTDNSCE----KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFC-EADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIK--AGEI-------DHAIG-----LFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFC 3707
++ +E LFD L ++ E A ++ ++LL F + D + N NV L + ++ + G L +A++++D + E +S+P + SL L K + +A ++ +M +G VD L+ C K+++ ++ GC P+ YNT+I G+ K+G + +++F ++ +G P++ TF MI+ +C+EG + LL+ + + L S++ N I +A+ Y GY++D A + IA N C D +N+LI+ LC++ +++ A F+D+ G +P +Y LI+ + ++ A LL +M +G PD T I+I+ G+++ A ++ ++ DRG+ P AIYN ++ L + + A +F ML+ + PD +Y T+I+GF +G EA ++F + ++ + A+I G + M D+ + +M ++ LVP+ Y+++I ++++++ A ++ M++N+ + +++ Y SL++GF +G + E+ F KE LR +PN+ Y +I E+ ++ A ++ELM +PN+VTF L+ G +K +G++ +H F++M +DG + Y + LC + A M K+G P ++ IL FC
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR----------VSVWFLNNIIDAK------------------------YRHGYKVDPAESIGWIIA-NDCKPDV-------------------------------ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF------------CCQGDFKMAEETF----------KEMQLR-----------------------DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756 HSP 2 Score: 174.866 bits (442), Expect = 3.115e-43 Identity = 142/627 (22.65%), Postives = 254/627 (40.51%), Query Frame = -2
Query: 2043 SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL-LTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGN-LEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNF 3917
S + DA D + RG +D + +L+K + G + + G+G IP+ N+I+ CKLG +E A ++F L L F ++ C + F+ + ++ + + W+ N +ID + GY + + + + P + Y L LCK+G A + +G + Y LI YCK ++ +A ++ +M + GC+PD TY LIHG V G D + +++++G+ P +++++S C+ G+ A +L + M+ +N+ P+A+ Y LI + EA + + + G+ D V ++K + + LD A + + NEE +L K ++ +I +Q +A ME C P + TY SLI +G F+ AE MQ + + P+ T +I K + LE A + M P +NC++ F +K + A +PD SN+G+ FH M + +Y + + L M C + +KM+ G P+ V + +++ F
Sbjct: 183 SRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW-GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA-NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM----------------NEE---------------HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG-FVKKTSGKVLA----------EPDG----------SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755 HSP 3 Score: 162.925 bits (411), Expect = 1.651e-39 Identity = 151/738 (20.46%), Postives = 288/738 (39.02%), Query Frame = -2
Query: 1209 EAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKM-GCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLE-ALSLLHVMHKRGLIPSKGTYEIILQYFCD----SYLAVPA----------FKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 3374
E E + G + ++ + + +++ Y + + A+ +Y ++++ PD N+L+ VK ++++M ++G + +++ C EGKV+ L+ K G +P+ V + ++ Y K +++ A++V K + L G F P L F +I+ C++ ++ + +++ G ++ N++I + G D + + A PD AT I+IN CK G E A LD+ +G+ P Y +I + + K+ A+ + ++M E G PD + Y +I+G +G + +A + ++I + P + Y L+SGL K +MLD ++P+A +Y +LI F++ +F+ A ++ L ++ D++ + +++ GF RS M AL + ++ + +P+ + Y+ II G+ + M A F M+K PN VT+T L+ G G+ A F +M P+ + Y L+ L + S LE A+ +M +P++ T+ +LQ F LA P + F M N L LCV ++ AC+ D ++++G P
Sbjct: 117 EIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGK-----------------------------------GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG--FMPTL-----------------------------ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS---------------------------------------------GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSP 743 HSP 4 Score: 138.658 bits (348), Expect = 8.776e-32 Identity = 126/565 (22.30%), Postives = 219/565 (38.76%), Query Frame = -2
Query: 1167 IEEIL----KSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESL-GCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHE-----------------------------------MIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 2741
IE++L N+ L A + ++ A E A D + L +P + NSL+ L + DA + + M +G D + I++ C G +E +++ +G P + YN IIG + + A +F + G P + TMINGF G + +DRL E +I +P +Y LI+ L K+ + +L++ GL+PN + Y LI + + +E++ A +L+ M + D++ Y L+ G L VS +A+ +KLI + P+ +YN+++SG C+ R A F M +LP+ + L+ G I++G+ D A +F+ G D + + ++ G C++ L EAL+ ++ M++ L+P K TY I+ + A KIF M P + L+ C Q + A + + R P T + I++ K
Sbjct: 118 IEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG----------------------------------------LVVSGHMDDAVN-MKVKLIDR----GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A0B0MFC3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22354 PE=4 SV=1) HSP 1 Score: 1873.98 bits (4853), Expect = 0.000e+0 Identity = 909/932 (97.53%), Postives = 918/932 (98.50%), Query Frame = -2
Query: 1335 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 4130
MTNKRVLSRHLFFK+RRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHL LAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL+TDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLC+QGWVVEAESLFGK+ESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLK GCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMM QGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNL PAFDILDQMEDRGMKPGVAIY+CII SLFR+KKVSEA MFVRML+SGVDPDEIIYLTMINGFSNNGRVIEA RLFHEMI AAIRPTSHSYTALISGLVKK+MTDKGC YLEKMLDDGLVPNAVLYTSLI+NFLQK EFEFAFRLVDLMDRNQIE DLI YISLVS FYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM
Sbjct: 1 MTNKRVLSRHLFFKTRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLLLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNFLQKGEFEFAFRLVDLMDRNQIELDLISYISLVSRFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 932 HSP 2 Score: 190.66 bits (483), Expect = 6.799e-46 Identity = 163/670 (24.33%), Postives = 299/670 (44.63%), Query Frame = -2
Query: 1173 QMMEQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERD-LIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3143
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +NVLI LC++ + A D M E +P L Y SL L ++G +AESL ++++QG F D+ +IN +CK ++ A + +M G +P YN +I + +F +M+ G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K+N + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + A + K++ MP L+ YN +I + +DA MQ +G+ P+Q T I++ H K G + A + ++M G P +Y ++ L + ++ EA + M K G+ P + Y ++ F ++ + A ++F EM+ + P + L+ L + + C+ + ++ G P + I F
Sbjct: 51 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLLLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNF 696 HSP 3 Score: 170.629 bits (431), Expect = 1.223e-39 Identity = 157/662 (23.72%), Postives = 285/662 (43.05%), Query Frame = -2
Query: 2067 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVL 3980
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +NVLI LC++ + A D M E +P L Y SL L ++G +AESL +M++QG F D+ +IN +CK + A + +M G +P Y+ +I + +F +M++ G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K++ + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + A + K++ MP L+ YN +II+ C+ ++ A+D + M+ G+ P + ++G + ++ A +F +M G PD I+Y ++NG R++EA L H M + P+ +Y ++ + E+M DGL A+L
Sbjct: 330 QMMGQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLAPAFDILDQMEDRGMKPGVAIYDCIIRSLFRKKKVSEAKDMFVRMLKSGVDPDEIIYLTMINGFSNNGRVIEARRLFHEMIEAAIRPTSHSYTALISGLVKKDMTDKGCMYLEKMLDDGLVPNAVLYTSLINNFLQKGEFEFAFRLVDLMDRNQIELD-LISYISLVSRFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYN-----------------------------------VIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM-QDGLQLTAML 942 HSP 4 Score: 102.064 bits (253), Expect = 1.742e-18 Identity = 63/120 (52.50%), Postives = 64/120 (53.33%), Query Frame = -3
Query: 800 KDGLQLTAMLVLNY*SLSSVGFKNKERKISWLDASGVLLKTCQKVFFHKYRMRCCLCPEKSREKFKL*ADIRVCTSVL*VFQILQIPGSIELTGIKIKCSTNFPVFFQLVIWPNLMEKLI 1159
+DGLQLTAML RKISWLDASGVLLKTCQK ILQIPGSIELTGIKIKC TNFPVF QLVIWPNLMEKLI
Sbjct: 933 QDGLQLTAML----------------RKISWLDASGVLLKTCQK--------------------------------------ILQIPGSIELTGIKIKCYTNFPVFLQLVIWPNLMEKLI 998 HSP 5 Score: 65.855 bits (159), Expect = 2.651e-7 Identity = 48/197 (24.37%), Postives = 91/197 (46.19%), Query Frame = -2
Query: 1140 YLYNVIISGFCEADRMQDAYDHFELM-QKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRKW*ERWTSAD 1727
+ YNV+I G C+ +++A F+LM ++ LP + L G + G + A LF K+ + G D +Y L+N C+ ++ AL + + M K G P TY ++ F L + +F +M+ P + + ++ C + K+ A ++ +++I + P ++ I + K R T A+
Sbjct: 200 WYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCRQGWVVEAESLFGKIESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKTGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMGQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKE-NRITEAE 395
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A0D2QJ46_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G114200 PE=4 SV=1) HSP 1 Score: 1848.56 bits (4787), Expect = 0.000e+0 Identity = 895/915 (97.81%), Postives = 904/915 (98.80%), Query Frame = -2
Query: 1398 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSK----GTYEI 4130
MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYAT+SSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRL+TDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYN+LIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSL KENRI EAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFN+LISALCEQAQQDSA +FMDKMESLGCMPLLFTYNSLIKCLSQK LFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIY+CIIGSLFRQKKVSEATAMF+RMLESGVDPDEIIYLTMINGFSNNGRVIEAD+LFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWF+MRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYN IISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSK TY I
Sbjct: 1 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATVSSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNMLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCLSQKSLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFSMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNGIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKEIAGSTYSI 915 HSP 2 Score: 195.667 bits (496), Expect = 1.115e-47 Identity = 164/670 (24.48%), Postives = 302/670 (45.07%), Query Frame = -2
Query: 1173 QMMEQGLQPSVVT-FHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNG-GLVPDHVLFFKLMKMYPKGYELDIAFMVL-KAIALNGC---GFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERD-LIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHR--QSLLPKEK---NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3143
Q++ +GL S F ++SN V A ++ + S+ L + Y VLI L + + A FY + G G++PD + ++ K +L+ A ++ + + N C F+ L+ + + E I+ ++ N++L +N+LI LC++ + A D M E +P L Y SL L ++G +AESL +M++QG F D+ +IN +CK ++ A + +M G +P YN +I + +F +M+E G+ P + + MI+ + G+V A L + MI + P +H YT LI+ L K+N + + E+ML+ GLVP+ VL+ L+ + + E + AF ++ + N D L+ +S +E +K+ L+ +S L K N+ +S +A + AL + K++ MP L+ YN +I + +DA MQ +G+ P+Q T I++ H K G ++ A + ++M G P +Y ++ L + ++ EA ++ M + G+ P + Y ++ F ++ + A ++F EM+ + P + L+ L + + C + ++ G P + I F
Sbjct: 51 QLINRGLLSSARKLFQRVVSN---SSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPAFNALVRLLCSQERFLDAFDYFIK-MININVNLGCWYYNMLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVS--------------------ANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCLSQKSLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNF 696 HSP 3 Score: 138.272 bits (347), Expect = 1.174e-29 Identity = 148/689 (21.48%), Postives = 289/689 (41.94%), Query Frame = -2
Query: 1335 VVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYR-MLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGL--QPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPK-GYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGL-VKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKN--LRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEM 3380
V +A S + S+G +D + Y LI + + +A Y ++ G PDS N+++ K+G + +LF++++ +P+ F+ ++ C + + A MI+ N+ Y +LI L ++ + EA + ++ L+P+ + +Y Y L V++A +L G ++ + K + LI+ C+ + A +M +GC P +TYN+LI + GLF+ L N+M QG+ P T ++I+ +C+ G ++ A +L+ M + + P Y +I SL ++ ++ EA + RML G+ PD +++ ++ + E D F M+ AI + L+ + + + K +E++L L V + LIS ++ + + A +D M+ L Y SL+ S+K F E A E L + Q + P + + +++ A ++ +++ P + +Y+ II ++ +A F M + GV P+++ + ++ G G + A LF++M P Y L++GL + + + + L M GL+P+ Y ++ F AF++ + M
Sbjct: 75 VSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLVTDNSCEKPA---FNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNMLIDGLCQKGYLEEAIQMFD------LMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFG-------------------------KMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLCKENRIMEAEEFYERMLNGGLVPDHVLFFKLMKMYPKG---YELDIAF--MVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNILISALCEQAQQDSALHFMDKMESLGCMPLLFTYNSLIKCL-----SQKSLF------EDA-ESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYDCIIGSLFRQKKVSEATAMFIRMLESGVDPDEIIYLTMINGFSNNGRVIEADQLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLM 712
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A061G037_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_014940 PE=4 SV=1) HSP 1 Score: 1536.55 bits (3977), Expect = 0.000e+0 Identity = 739/988 (74.80%), Postives = 844/988 (85.43%), Query Frame = -2
Query: 1167 MTNKRVLSRHLFFKSRRAVTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTFRK 4130
M KR+LS HLFFK+RRA+TTS LPLDPS+A +SSI DH S CLS +EQLI RGLLSSA++L QR++S SS VSDA++ VDFVT+RGLDLDLST+ LIKKLV+SG+ LAYS YSD II RGI PD I NS+VICLCKLGKLEEA+ LFDRLL +NS EKPAFNALVR L +QERFLD FDYF+ M +I VNLGCWYYN LIDGLCQKG LEEAIQMFDLM E PTLHLYKSLFYGLCK GWV+EAE L G++ESQGF+VD+TMYTSLI YCK RKMKMA+R+Y RMLK GC PDSYTYNTLIHGFVKMGLFD GWVL+NQMME+GLQP V+T+HVMISNYCREGK +CASMLLN+M+S NLAP+ HCYTVLITS YKENR+ EA E Y+ ML GG+VPDHVLFF LMKMYPKGYEL +A M+++AIA+NGCGFDPLLL VS +E+LEQKI +LI +I K+NL LA VAF +LISAL E + D+A +FMDK+ +LGCMPLLFTYNSL+KCLSQ+GLFEDA+SL++ MQ +GIFPDQAT LI++NEHCKHG+L AFDILDQMEDRGMKPGVAIY+CIIGSL RQK++ EA MF+RMLESG DPDEI+Y+TMING++ NGR+IEA +LF +MI AIRPTSHSYTALISGLVKK+MTDKGC YL++ML DGLVPN VLYTSLI+NFL+K EFEFAFRLVDLMDRNQIE DLI YI+LVSG R+I+SRKRW +++R SERARE LF+LLH + LLP+EK LRVSDSSPEAMKCFALKL+QKVK+TRFMPNLYLYN IISGFC ADRMQDAYDHFELMQKEGV PNQVT TILMGGHIKAGEIDHAI LFNKMNAD CTPD I Y L+ GLCQA RLLEALSLLH MHKRGLIP K TYE +L +FC SYL +PAFKIFEEM+ + P+ Y NWLLCILC Q+KLREA IV+D++IQRGKYP K T+ L +T RK
Sbjct: 1 MIKKRLLSCHLFFKTRRAITTST-LPLDPSFAAVSSICTDHKSFCLSLTEQLIKRGLLSSAQQLIQRIISQSSSVSDAITAVDFVTARGLDLDLSTFGALIKKLVRSGYPQLAYSLYSDNIIRRGINPDPFIVNSMVICLCKLGKLEEASTLFDRLLMNNSSEKPAFNALVRELFAQERFLDVFDYFVAMSDIGVNLGCWYYNGLIDGLCQKGNLEEAIQMFDLMRETAGLSPTLHLYKSLFYGLCKHGWVLEAEFLIGEIESQGFYVDRTMYTSLIKEYCKDRKMKMAMRIYLRMLKTGCEPDSYTYNTLIHGFVKMGLFDQGWVLYNQMMEKGLQPDVITYHVMISNYCREGKANCASMLLNSMVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTGGIVPDHVLFFTLMKMYPKGYELHLALMIVQAIAVNGCGFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCLLPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRK 987 HSP 2 Score: 186.808 bits (473), Expect = 1.167e-44 Identity = 156/642 (24.30%), Postives = 279/642 (43.46%), Query Frame = -2
Query: 1998 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEKPAFNALVRLLCSQERFLDAFDYFI-KMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFD-----PLLLPVSANEELEQKIVIL------IEEILKSNLH---LAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDL 3878
+ S L + Y VLI + L A Y + G GI+PD + +++ K +L A ++ + N C F+ L+ + E + I K+ N++L + +LI L + L+ A+ D + +P L Y SL L ++G +A+SL M+ +G F D+ Y ++N +CK + A + +M G +P Y+ +I + +F +M+E G P + + MI+ Y + G++ A L MI + P +H YT LI+ L K++ + + +RML GLVP+ VL+ L+ + + E + AF ++ + N D L+ V N ++ + E+L LH L + +S +A + A M K++ MP L+ YN +I +DA MQ +G+ P+Q T I++ H K G ++ A D+ ++M P YN +I L + ++ EA ++ M + G+ P + Y ++ F + I A ++F EM+ + + P +SY L+ L ++ + + M+ G P L ++ E +F F + D+
Sbjct: 365 MVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTG-GIVPDHVLFFTLMKMYPKGYELHLALMIVQAIAV-NGC---GFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMN-LGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCLLPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQAGRLLEALSLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRKQGECDFGFMIQDI 1000 HSP 3 Score: 181.8 bits (460), Expect = 4.163e-43 Identity = 178/816 (21.81%), Postives = 339/816 (41.54%), Query Frame = -2
Query: 1572 VTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLM------PERTESLPTLHLYKSLFYGLCKQGWVVEA-------------------------ESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRG--MKPGVAIYNCIIGSLFRQKKVS------EATAMFV-----RMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLR--VSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEID 3878
+ S+G +D + Y LIK+ + + +A Y ++ G PDS N+++ K+G ++ +L+++++ + ++ ++ C + + A M++ N+ Y VLI ++ L EA +++ M P+ + +Y Y L +V+A E L GK+E + +T LI+ +GRK+ A+ +++ +GC P +TYN+L+ + GLF+ L + M ++G+ P T+ +M++ +C+ G + A +L+ M + + P Y +I SL ++ R+ EAE+ + RML G PD +++ ++ Y K L + A + E+ +IE+ ++ H ++ LIS L ++ D ++D+M G +P + Y SLI +KG FE A L++ M I D T + +++ C++ + + + +R M + Y C+ L R+KK+ EA F ++ E+ P+ +Y +I+GF R+ +A F M +RP + T L+ G +K D KM D P+ + Y +LI Q A RL++ + L +H++ L+P++ ++ + A K+ +++ + +P Y YN ++ CE ++++AY F+ M + G P + T +L K GE D
Sbjct: 260 IESQGFYVDRTMYTSLIKEYCKDRKMKMAMRIYLR-MLKTGCEPDSYTYNTLIHGFVKMGLFDQGWVLYNQMMEKGLQPDVITYHVMISNYCREGKANCASMLLNSMVSNNLAPSVHCYTVLITSFYKENRLMEAGELYKSMLTGGIVPDHVLFFTLMKMYPK-GYELHLALMIVQAIAVNGCGFDPLLLAVSDSEDLEQKIELLIGKIEKTNLSLANVAFTILISALSEGRKLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAEDMFIRMLESGEDPDEIVYMTMINGYAKNGRL-----------------------IEARQLFEK----MIEDAIRPTSH----SYTALISGLVKKDMTDKGCMYLDRMLGDGLVPNVVLYTSLINNFLRKGEFEFAFRLVDLMDRNQIEHDLITYIALVSGVCRNITSRKRWCSIKRSSERAREMLFRLLHYRCL---LPREKKLRVSDSSPEAMKCFALKLMQKVKETRFMPNLYLYNGIISGFCWADRMQDAYDHFELMQKEGVRPNQVTLTILMGGHIKAGEIDHAIDLFNKMNADDCTPDKIAYNTLIKGLCQ------AGRLLEAL-----------------------------------------SLLHAMHKRGLIPRKATYENLLAHFCASYLCIPAFKIFEEMLASNVVPRPYSYNWLLCILCEQKKLREAYIVFDTMIQRGKYPLKSTERLLAETLRKQGECD 992
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: F6HAK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g01780 PE=4 SV=1) HSP 1 Score: 1097.03 bits (2836), Expect = 0.000e+0 Identity = 542/929 (58.34%), Postives = 685/929 (73.74%), Query Frame = -2
Query: 1365 MTNKRVLSRHLFFKSRRAVTT-SAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSA----NEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLA 4130
M K + R LFF ++ + T S AL PS A + H LC + +++LI RG+LS +++ +R++ S VSDA+ V+F +RGL+LD Y VL++KLV SG A + Y DY+I RGIIPDS NS+VIC C LGKLEEA FDRL +S KPA NA++R LC++ER L+AFDYF+++ ++ + +G W +N LIDGLC KG+++EA MFD M ERT T+HLYK+LFYGLC+Q V EAE G+MES+G F+DK MYTSLI+ YC+G+KM+ A+RV+ RMLKMGC PD+YTYNTLIHGFVK+GLFD GW+L NQM E GLQP+VVT+H+MI YC EGKVDCA LL++M S NL P+ H YTVLIT+LYKENR+ E EE Y++ML+ G+VPDHVLFF LM+ PKG+EL +A +L+AIA NGC D LL SA +++EQ+I L+ EI++ N LA VAF + ISALC + D+A FMDKM SLGC PLL TYNSLIKCL Q+ L EDA+SL++ MQ GI PD AT LI+++EHC HG+L AF +LDQM +RG+KP VAIY+ IIG L R+K++ EA +F MLE+GVDPD IIY+TMI+G+S N R IEA +LF +MI +P+SHSYTA+ISGLVK+NM DKGC+YL ML DG VPN VLYTSLI+ FL+K E EFAFRLVDLMDRNQIE D+I I+LVSG R+I+ R+RW+ ++ GS R RE L LLH+ ++P+E NL SP +K FAL L+QK+K + FMPNLYLYN IISGFC A+ +QDAY+HFELMQ EGV PNQVTFTIL+ GH + GEIDHAIGLFNKMNADG PDGI Y L+ GLC+A RLL+ALS+ H MHKRGL P+K +YE +L+ C S+L
Sbjct: 1 MLKKGLKPRRLFFTPKKNLATCSPALDPPPSSAPTTE---HHNKLCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRRWYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPNLYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFNKMNADGLAPDGITYNALIKGLCKAGRLLDALSVSHTMHKRGLFPNKSSYEKLLKCLCASHLG 926 HSP 2 Score: 161.384 bits (407), Expect = 1.232e-36 Identity = 123/511 (24.07%), Postives = 226/511 (44.23%), Query Frame = -2
Query: 1173 FNVLISALCEQAQQDSASYFMDKM-ESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQ--SLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 2696
FN LI LC++ D A Y D M E G + Y +L L ++ E+AE + M+++G F D+ +I+ +C+ + A + +M G P YN +I + + + +M E G+ P+ + Y MI + G+V A L M + P+ HSYT LI+ L K+N + +KMLD G+VP+ VL+ +L+ + E A +++ + +N DL S + + E+ E L + R+ +L + +S AL + K+ P L YN +I + ++DA +LMQ+ G++P+ T+ I++ H G++ A GL ++MN G P +Y ++ L + R+LEA ++ +M + G+ P Y ++ + + A+ A ++F++M+ + P + ++ L + + + C +++ G P + I F
Sbjct: 201 FNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQPKGHELHLALKILQAIAKNGCNLDLCLL------------STSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQF 699 HSP 3 Score: 138.272 bits (347), Expect = 1.715e-29 Identity = 127/558 (22.76%), Postives = 238/558 (42.65%), Query Frame = -2
Query: 1209 LDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDR-GMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFY---RSISSRKRWFAMRR-GSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPN----QVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 2855
L + F + + L+ CG+ LL + + E + + ++ + N ++ C + + A D++ + P N++++ L + +A R+ GI +I+ C G+++ AF + D M +R G+ + +Y + L RQ++V EA M G D+++Y ++I+G+ ++ A R+F M+ P +++Y LI G VK + DKG +M + GL PN V Y +I + ++ + + A L+ M + + Y L++ Y R + + + M G F L+ +Q PK L + ALK++Q + + +L L +S QD E + E V N V F I + AG+ D A+ +KM + GC P Y L+ L Q + +A SL+ +M + G++P TY I++ C+ AF + ++M P + + ++ L ++++ EA V+ +++ G P
Sbjct: 78 LAVEFAAARGLELDSCGYGVLLRKLVGSGEHRFAEAVYRDYVIARGIIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAFDYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTLFYGLCRQERVEEAELFVGEMESEGHFIDKMMYTSLIHGYCRGKKMRTAMRVFLRMLKMGCDPDTYTYNTLIHGFVKLGLFDKGWILHNQMSEWGLQPNVVTYHIMIRRYCEEGKVDCALTLLSSMSSFNLTPSVHSYTVLITALYKENRLVEVEELYKKMLDIGVVPDHVLFFTLMQKQ---PKGHELHL-----------ALKILQAIAKNGCNLDLCL----LSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLSRRKRILEAENVFKMMLEAGVDP 617
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: V4U6Q9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004237mg PE=4 SV=1) HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0 Identity = 507/996 (50.90%), Postives = 674/996 (67.67%), Query Frame = -2
Query: 1173 MTNKRVLSRHLFFKSRRAVTTSAAL-----PLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSAN----EELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 4130
M ++ S H K+RR TS L PL + S +DH C S ++QLINRGL++SA+++ QR+++NS+ +SDALS DF RG+ D +Y+ L+KKL++ G A Y + + GI PD +I NS++I CKLG +E+A FDRL++ N K A +++R L ++E+FL+AFDYFIK+ N V+L CW YNVLIDGLC KG+L+E +++ ++M ++ +P LH YKSLFY LCK VEAES +MESQGF+VDK MYTSLIN YC R MKMA+R+++RMLK GC PDSYT NTLIHGF KMGLFD GWVL++QM + G QP++VT +MISNYCREG+VD A MLLN+ +S NLAP+ HCYTVLI +LYK NR+ E +E Y++ML + PDH+L F L+K P+G EL A M+L A GCG DPL +SA +L Q+I +L+ +I+KS+ LA VAF + ISALC+ + + A + ++ + G PL+FT N+LIKC Q G E A +++ MQ GI D T LI++ +CK GNL+ A DILDQME RG KP VAIY+ IIG L ++K++ EA MF RML++G+DPDE+ + TMING+ N + IEA +LF +M +++P S+ YTALISGLVKK M D GC YL++ML DG VPN VLYT+LI++FL+ EFEFA RL +LM NQIE DLI YI+LVSG R I+ RK+W + R S+ +E LF L + +L+P+ K+ S K K++ KVK FMPNLYLYN I C RM DAYDHF++M++EG+ PNQVTF IL+ GHI AGEID AIGLFN+MNADGC PD VY L+ GLCQA RL S+ + MHKRG +P K TYE +L+ FC + L++PAF +F+EM+V+ P L CNWLL IL ++ EA IV D + +RG+ P K T+ + K F
Sbjct: 1 MVTRKPGSSHFLSKTRRRAITSCTLEVEREPLANVASASQSTFSDHKMFCFSLADQLINRGLIASAQQVIQRLIANSASLSDALSAADFAAVRGMRFDSGSYSALMKKLIKFGQSQSALLLYQNDFVALGIDPDPAILNSVIIGYCKLGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNRRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGWVLYSQMSDWGFQPNMVTDLIMISNYCREGEVDAALMLLNSKVSSNLAPSVHCYTVLIDALYKHNRLMEVDELYKKMLANRVAPDHLLSFILLKNCPEGTELQHALMLLCEFAKIGCGIDPLARSISATLNPTGDLCQEIELLLRKIVKSDPKLANVAFTIYISALCKGGKYEKAYVCLFQLVNFGYRPLVFTCNTLIKCFYQVGFLEGANAIVELMQDTGIVADVETYLIMVEGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGCMYLDRMLADGFVPNVVLYTALINHFLRAGEFEFASRLENLMVTNQIEFDLIAYIALVSGVCRRITGRKKWLDVNRCSDSGKEMLFHKLQQGTLVPRTKSTAFSAVFSNGKKGTVQKIVLKVKDIEFMPNLYLYNDIFLLLCGVGRMDDAYDHFQMMKREGLRPNQVTFCILINGHIAAGEIDQAIGLFNQMNADGCVPDKTVYNTLLKGLCQAGRLSHVFSVFYSMHKRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILFQEKHFHEAQIVLDVMHKRGRLPCKSTRGFWRKHF 996
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A059CBT8_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_D00222 PE=4 SV=1) HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0 Identity = 489/941 (51.97%), Postives = 675/941 (71.73%), Query Frame = -2
Query: 1239 DPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCEK-PAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELE--QKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVY 4049
+P + ADH SL LS EQLI RG SSAR + +R++ + DA+S V+++ SRGLDLDL++ L++KLVQ G LA ++Y++ ++ RGI+PDS + + +++CLCKLGKL EA FDR + + A +A+ R LC++ L+AFD+F+ +I V++ YN LID LC KGY++EA+++F L E TE PTLH YKSLFYGLCK+G +VEAE L +ME+QGFFVDK MY LI Y K RKMKMA+R+++RMLK+GC D +T+NTLI+GF+K G+FD GW ++ QM++ G+QP+VVT+H+MISNYCREG+VDCA LLN M+ ++ P+ H YT LI SLYK++++TEA+E +RML+ G++PD + F +++M+P+G EL +A+M+L+AI G L + ++ ++ Q I L+E I + +L+LA +AF + ISALCE+ D+A +DK +S+GC +LFTYNSLIKCL KGLFE+AESL + +Q +GI PD T LI+IN +CK GNL+ A+ ++DQ+ +RG+KP VA+Y+CIIGSL K++SEA +F RMLE G+DPDE IY+TMIN ++ +GR++EA LF +MI I+PTS+SYTALI+GLVK++MT+KGC YL+KM+ DG PN VLYTSLI ++L+ EF+FAF LVDLM +NQI+ DL+ YI ++ G R IS + +W R S +AR+ LF LL +SL ++NL+V + PEAMK FAL L +K+K + FMPNL+LYN +ISGFC A+ ++DAY H ELMQ+EG+ PNQVT+TIL+G HI GEID A+GLFNKMNADGC PDG+ Y LV GLC RLL+ LSL++ MHKRGL PSK +Y +L C S L + AFKIFEEM+ ++ P + N L LCV + EA I++
Sbjct: 1 EPPASVAPGNSADHGSLTLSLLEQLIRRGQFSSARSVVRRMIIRAPSAPDAVSAVNYLASRGLDLDLNSCGALLRKLVQCGEYRLAEAWYNENVVDRGIVPDSCMMDPMIVCLCKLGKLGEAKREFDRCVELGALPNVQACDAIFRELCARGMALEAFDFFVGLIGAGVSMRIGCYNQLIDALCLKGYMDEAVKVFCLQQEITELPPTLHQYKSLFYGLCKRGRIVEAEQLSIEMEAQGFFVDKVMYNCLIFGYSKDRKMKMAVRIFFRMLKLGCEVDDHTFNTLIYGFMKWGIFDKGWAMYKQMVDSGIQPTVVTYHIMISNYCREGEVDCALQLLNEMLVCDITPSVHSYTTLIASLYKKDKLTEADELCKRMLDNGVLPDPIFFLVVIRMHPRGCELQLAYMMLQAI-----GNSVSLASNTWDDSMDFGQNIEHLLEGIARKDLNLASIAFAICISALCERGDIDAAILLVDKADSVGCQLMLFTYNSLIKCLCYKGLFEEAESLHDLIQDRGIVPDLETYLIMINGYCKQGNLQSAYRVMDQISERGLKPNVAMYDCIIGSLSSIKRISEAEDLFKRMLEDGMDPDETIYMTMINAYARSGRLLEASELFDKMIDNFIKPTSYSYTALINGLVKRDMTEKGCIYLDKMIGDGYEPNNVLYTSLIGHYLRGGEFKFAFMLVDLMYKNQIKCDLVTYIVVLRGVCRHISGIKHKWGITSRASYKARKMLFDLLQSRSLATIDRNLKVPVNLPEAMKHFALNLFKKIKDSEFMPNLFLYNGLISGFCRANMIEDAYHHVELMQREGLQPNQVTYTILIGEHINRGEIDSAVGLFNKMNADGCLPDGLAYNRLVRGLCSCGRLLDGLSLVYAMHKRGLFPSKLSYNCLLNQLCSSGLNIHAFKIFEEMLTHNIIPSVRCSNLLHSNLCVSGRWHEAQIIH 936 HSP 2 Score: 84.7297 bits (208), Expect = 3.622e-13 Identity = 86/401 (21.45%), Postives = 158/401 (39.40%), Query Frame = -2
Query: 2928 EQLINRGLLSSARKLFQRVVSNSSPV---SDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN-SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQ-------------KGYLEEAIQMFDLMPERT--------------------------------ESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERM 3983
+Q+ RGL + ++ ++ + S + S+A + G+D D + Y +I +SG L A + D +I I P S +++ L K E+ I D+++ D + +L+ F AF M + Y V++ G+C+ + + +FDL+ R+ E +P L LY L G C+ + +A M+ +G ++ YT LI + ++ A+ ++ +M GC PD YN L+ G G G L M ++GL PS ++++ +++ C G A + M++ N+ P+ C +L ++L R EA+ + M
Sbjct: 541 DQISERGLKPNV-AMYDCIIGSLSSIKRISEAEDLFKRMLEDGMDPDETIYMTMINAYARSGRLLEASELF-DKMIDNFIKPTSYSYTALINGLVKRDMTEKGCIYLDKMIGDGYEPNNVLYTSLIGHYLRGGEFKFAFMLVDLMYKNQIKCDLVTYIVVLRGVCRHISGIKHKWGITSRASYKARKMLFDLLQSRSLATIDRNLKVPVNLPEAMKHFALNLFKKIKDSEFMPNLFLYNGLISGFCRANMIEDAYHHVELMQREGLQPNQVTYTILIGEHINRGEIDSAVGLFNKMNADGCLPDGLAYNRLVRGLCSCGRLLDGLSLVYAMHKRGLFPSKLSYNCLLNQLCSSGLNIHAFKIFEEMLTHNIIPSVRCSNLLHSNLCVSGRWHEAQIIHHLM 939
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: U5GGL2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s21110g PE=4 SV=1) HSP 1 Score: 959.518 bits (2479), Expect = 0.000e+0 Identity = 495/985 (50.25%), Postives = 667/985 (67.72%), Query Frame = -2
Query: 1209 MTNKRVLSRHLFFKSRRA-VTTSAALPLDPSYATISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSC--EKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPK--GYELDIAFMVLKAIALNGCGFDPLLLP----VSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSI-SSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGC-TPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYP 4130
M +R L+FK ++ +T++ A+ LDP IP DH SLC S L+ RGLLSSA+++ QR +++S V DA+S V+F ++ G+DL LI+KLV GH A FY D ++ RGI PDS+I NS+VICL KLGKL++A LFDR + C A + +++ Q++F++AFDYF+++ + NV LG W YNVLIDGLCQ+GY+ EAI++ D+M T PTLH+ K+LFYGLCK+GW +EAE +F +ME+QGFFVDK MYTSL+N Y + +KMKMALRVY+RMLK G PD T NTLI+GF KMGLFD WVL+N M + G+QP+ VT+ +MI NYC++GK+DCA LLN+M NL P HCYT ++ +LYK NR E +E+ ERML G+VPDHVLFF LMK PK G+EL + ++L+AIA NGCG D L +++ LEQ+I +L+ EI +S+L+L VA + +SALCE + +SA ++ M + GC+PLLFT+NSLIK L Q GL ED +SL+ MQ GI P+ T LI++NE+CK +L AF IL+QM++ G+KP VAIY+CII L +Q+++SEA +F RMLE+GVDPDE+ Y+TMIN ++ NG+ ++A LF MI AI+P +K+ MT +GC YLEKML +G VPN VLYT LI++FL+ EF++AFRL+DLM R+QIE DL+ +I+ +SG R+I ++KRW+ R S RAR+ LF LLH++ L E VS FMPNLYLYNV +SGFC + ++DAY LMQ+EG+LPN+VTFTIL+G H +AGEID AIGLFN+MNADGC TPD Y L+ LC++ R L+ALSL+H + KRG P++ YE YFC ++++PAF+IFEEMV + P LY N LL ILC ++KL EA D + +RG P
Sbjct: 1 MIKRRPFCHALYFKPKKGPITSTCAVSLDPQ-----PIPNDHTSLCQSLVHDLLRRGLLSSAQQVVQRFIASSPTVHDAISAVEFASASGMDLGPGISGELIRKLVDLGHPLSAREFYHDLVVARGIEPDSNIVNSLVICLAKLGKLDDAVKLFDRHIGSGDCLVSNAACSTILKGFYEQDKFVEAFDYFVRISDANVKLGMWAYNVLIDGLCQQGYVGEAIEVLDIMCRITGLPPTLHMLKTLFYGLCKRGWSIEAEWIFEEMEAQGFFVDKVMYTSLMNAYGRDKKMKMALRVYFRMLKNGYDPDICTCNTLIYGFSKMGLFDKAWVLYNLMNDLGIQPNEVTYSIMIHNYCKKGKLDCAMSLLNSMAPCNLTPCVHCYTPIMVTLYKLNRCLEVDEWCERMLESGIVPDHVLFFVLMKNKPKGLGFELQLCLLMLQAIAKNGCGLDCSSLTNSDKINSTLALEQEIELLLREIARSDLNLGNVAGGIYVSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGISPNLETYLIMVNEYCKQEDLALAFGILEQMDEMGLKPSVAIYDCIIACLSQQRRISEAETLFCRMLENGVDPDEVAYMTMINAYARNGKGVKALHLFEMMIKNAIQP------------MKRKMTIEGCVYLEKMLAEGFVPNIVLYTFLINHFLKMGEFKYAFRLIDLMFRSQIEADLVLHIAWISGVCRNIFGTKKRWYMTNRMSTRARKLLFNLLHQKVSLTGEDVFSVS--------------------AWFMPNLYLYNVTVSGFCWVNLIEDAYHQLRLMQEEGLLPNEVTFTILIGAHGRAGEIDRAIGLFNRMNADGCSTPDRCTYNTLLKSLCRSGRELDALSLVHTISKRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLHEAYRASDVMFERGFLP 948 HSP 2 Score: 135.576 bits (340), Expect = 9.490e-29 Identity = 126/517 (24.37%), Postives = 219/517 (42.36%), Query Frame = -2
Query: 2022 NVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVILIEEILKSN---LHLAKVAFNVL---ISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMK-PGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFE 3551
++NLG + + LC+ G E A+ + M +P L + SL L + G + +SL M++ G + Y ++N YCK + +A + +M +MG +P Y+ +I + LF +M+E G+ P V + MI+ Y R GK A L MI + P K E + E+ML G VP+ VL+ L+ + K E AF ++ + + D L+L ++ + + I + +N K+ FN+L +S E SA + MP L+ YN + L EDA L MQ +G+ P++ T I+I H + G ++ A + ++M G P YN ++ SL R + +A ++ + + G P+ + Y + F I A R+F EM+ + P + L+ L ++ + + M + G +P+ + + L FL + +F
Sbjct: 475 DLNLGNVAGGIYVSALCEGGKTESALDCLENMVN-AGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGISPNLETYLIMVNEYCKQEDLALAFGILEQMDEMGLKPSVAIYDCIIACLSQQRRISEAETLFCRMLENGVDPDEVAYMTMINAYARNGKGVKALHLFEMMIKNAIQP------------MKRKMTIEGCVYLEKMLAEGFVPNIVLYTFLINHFLKMGEFKYAFRLIDLMFRSQIEAD-LVLHIAWISGVCRNIFGTKKRWYMTNRMSTRARKLLFNLLHQKVSLTGEDVFSVSAWF----------MPNLYLYNVTVSGFCWVNLIEDAYHQLRLMQEEGLLPNEVTFTILIGAHGRAGEIDRAIGLFNRMNADGCSTPDRCTYNTLLKSLCRSGRELDALSLVHTISKRGFFPNRLAYEKSHHYFCAGHMSIPAFRIFEEMVACNLVPGLYRRNLLLYILCEEKKLHEAYRASDVMFERGFLPDESVMSPL---FLSRLDFH 964
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: K4BIJ2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g093150.1 PE=4 SV=1) HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0 Identity = 483/966 (50.00%), Postives = 668/966 (69.15%), Query Frame = -2
Query: 1221 KSRRAVTTSAALPLDPSYAT--ISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN--SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVI----LIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQR 4091
+++R +TTS PL PS A + + P +H +LC S + LI RGL SA+K+ +R++ +SS V +A+S V+F SRG++ D+++YA LI++LV SG A + Y D I+ RGI P+ S+ NS+ IC C LGKLEEA +LFD+L+ C N L++ C Q+R LD FD F++ IN V L YN L+D LC +GYL+EA+ +FD M +R PT+HL+K L L K+G V EA+ L MES GF +DK MYT+LIN Y K +KMK A+ ++ RM K+GC PD YTYNTLI+GF+ +G+FD GW+L QM+E GL+P V++ +MI+ YC+E KVDCA LL+++ N+ P+ H YT LI++LYKENR+ E ++ Y +ML GLVPDHVLFF L+ +P+G E+ +A L+AIA NGCG DP +P + ++ I++ L+ EI NL LA VAFN+ + ALC + DSA MDKM SL P L YNS+IKCL QKGL EDA+ L+ MQ QG P+QAT LI++NE+CK G+++ A ++LDQME+ G+KP VAIY+ +IG L R+K++ EA +F RMLE+G+ PD+ +++TMIN S NGR I+A LF M+ ++P+ ++YTALI+GLVKKNM +KGC YL++M+++G +PN VLYTSLI FL+KREFEFA +LVDLM+R+++ERDL+ YI+LVSG R+I S ++ +R E ++E LF+LLH+ ++LPKEK L++S +S E +K AL+LI KVK T MPNLYLYN IISGFC A+ M+DAY H MQ EG+LPNQVTFTIL+ GH ++GEI+ A+ LFN+MNA GC PD IVY L+ GLC+ RL++ALSL + M K+GL PSK +YE +L C S V A KI +M+ P + L+CIL + K EA +YD ++++
Sbjct: 18 RTKRPLTTS---PL-PSEAISCVHTSPLNHKTLCFSLAANLIVRGLFDSAQKVIRRIIKHSSSVPEAISAVEFSISRGVEPDVTSYAFLIRQLVTSGETLKAEALYVDCILNRGIEPNHSLLNSMAICYCNLGKLEEAKLLFDKLVDMKLMPCSSTC-NELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDILCFQGYLDEALYVFDEMCDRGVP-PTVHLFKRLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKEHKVDCALTLLDDINQWNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDPSFIPSPTSRKVTTDIMLDIDCLLGEIAARNLPLACVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKLLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGRKKRIDEALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQFLRKREFEFALKLVDLMERSEVERDLVTYITLVSGVSRNIRSVNEKGLVPQRRYEESKEMLFRLLHQSAMLPKEKCLKISVNSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFCWAESMKDAYKHLHTMQNEGILPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCPPDNIVYNTLIRGLCKHGRLMDALSLSYTMLKKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFMYDLLLKK 977 HSP 2 Score: 168.318 bits (425), Expect = 6.606e-39 Identity = 165/643 (25.66%), Postives = 272/643 (42.30%), Query Frame = -2
Query: 1173 ISKNLAPNAHCYTVLITSLYKENRITEAEEFY-ERMLNGGLVPDHVLFFKLMKMY---PKGYELDIAFMVLKAIALNGCGF--DPLLLPVSANEELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPK--EKNLRVSDSSPEAMKCFALKLI---------------QKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3032
IS+ + P+ Y LI L +AE Y + +LN G+ P+H L + Y K E + F L + L C + L+ + + + +E I S + LA +N L+ LC Q D A Y D+M G P + + LI LS++G E+A+ L M++ G D+ +IN + K ++ A + +M G +P YN +I + + +M+E G++PD + Y MI + +V A L ++ + P+ HSYTALIS L K+N + KML GLVP+ VL+ +LISN + E A + + +N D F S +SRK + +L LL + +NL P A F + +I K+ P+L YN +I + +DA E+MQ +G +PNQ TF I++ + K G+I A+ + ++M G P +Y ++ L + R+ EAL + M + G+ P K + ++ + A+ A ++F M+ P L+ L + + + C+ +I+ G P + IK F
Sbjct: 88 ISRGVEPDVTSYAFLIRQLVTSGETLKAEALYVDCILNRGIEPNHSLLNSMAICYCNLGKLEEAKLLFDKLVDMKLMPCSSTCNELIKGFCGQDRILDGFDVFVEAI-NSEVLLAFSCYNKLVDILCFQGYLDEALYVFDEMCDRGVPPTVHLFKRLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKEHKVDCALTLLDDINQWNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGID--------PSFIPSPTSRKVTTDI-------------MLDIDCLLGEIAARNL------PLACVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKLLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGRKKRIDEALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHELFVTMLEDGVQPSHNAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQF 702
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: M1B6U4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402014825 PE=4 SV=1) HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0 Identity = 482/966 (49.90%), Postives = 667/966 (69.05%), Query Frame = -2
Query: 1221 KSRRAVTTSAALPLDPSYAT--ISSIPADHFSLCLSFSEQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDN--SCEKPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSANEELEQKIVI----LIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISS-RKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQR 4091
+++R +TTS PL PS A + + P +H +LC S ++ LI RGL SA K+ +R++ +SS VS+A+S V+F SRG++ D ++YA L ++LV S A + Y D I+ RGI P+ S+ NS+ IC C LGKLEEA +LFD+L+ C N L++ C Q+R LD FD F++ IN V L YN L+DGLC +GYL+EA+ +FD M +R PT+HL+K+L L K+G V EA+ L MES GF +DK MYT+LIN Y K +KMK A+ ++ RM K+GC PD YTYNTLI+GF+ +G+FD GW+L QM+E GL+P V++ +MI+ YC++ KVDCA LLN++ N+ P+ H YT LI++LYKENR+ E ++ Y +ML GLVPDHVLFF L+ +P+G E+ +A L+AIA NGCG D +P + ++ I++ L+ EI+ NL LA VAFN+ + ALC + DSA MDKM SL P L YNS+IKCL QKGL EDA+ L+ MQ QG P+QAT LI++NE+CK G+++ A ++LDQME+ G+KP VAIY+ +IG L R+K++ EA +F RMLE+G+ PD+I+++TMIN S NG+ I+A LF M+ ++P+ ++YTALI+GLVKKNM +KGC YL++M+++G +PN VLYTSLI FL+KR+FEFA +LVDLM+R++IERDL+ YI+LVSG R+I S + +R E ++E LF+LLH+ ++LPKEK L++S SS E +K AL+LI KVK T MPNLYLYN IISGFC A+ M+DAY H MQ EG+ PNQVTFTIL+ GH ++GEI+ A+ LFN+MNA GC PD IVY L+ GLC+ RL++ALSL + M K+GL PSK +YE +L C S V A KI +M+ P + L+CIL + K EA +YD ++++
Sbjct: 18 RTKRPLTTS---PL-PSEAISCVHTSPVNHKTLCFSLADNLIVRGLFDSAEKVIRRIIKHSSSVSEAISAVEFSISRGVEPDATSYAFLFRQLVTSRETLKAEALYVDCILNRGIEPNHSVLNSMAICYCNLGKLEEAKLLFDKLVDKKLLPCSSTC-NELIKGFCGQDRILDGFDVFVEAINSEVLLAFSCYNKLVDGLCFRGYLDEALYVFDEMCDRGVP-PTVHLFKTLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKDHKVDCALTLLNDINQCNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDLSYIPSPTSRKVTTDIMLDIDRLLGEIVARNLPLASVAFNIYMIALCLGGELDSAQLCMDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKFLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGREKRIDEALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQFLRKRQFEFALKLVDLMERSEIERDLVTYITLVSGVSRNIRSVDGKGLVPQRRYEESKEMLFRLLHQSAMLPKEKCLKISVSSQEQIKFLALRLINKVKATPLMPNLYLYNGIISGFCWAESMEDAYKHLHTMQNEGIQPNQVTFTILIDGHFRSGEINCAVSLFNRMNAQGCPPDNIVYNTLIRGLCRHGRLVDALSLSYTMLKKGLAPSKASYESLLSSLCASNWRVHALKICHDMLANKYVPCGHNLKLLICILGEENKWHEARFMYDLLLKK 977 HSP 2 Score: 175.252 bits (443), Expect = 4.384e-41 Identity = 165/638 (25.86%), Postives = 283/638 (44.36%), Query Frame = -2
Query: 1173 ISKNLAPNAHCYTVLITSLYKENRITEAEEFY-ERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSA--NEEL-----EQKIV----ILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEK------NLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3032
IS+ + P+A Y L L +AE Y + +LN G+ P+H + + Y +L+ A ++ + D LLP S+ NE + + +I+ + +E I S + LA +N L+ LC + D A Y D+M G P + + +LI LS++G E+A+ L M++ G D+ +IN + K ++ A + +M G +P YN +I + + +M+E G++PD + Y MI + + +V A L +++ + P+ HSYTALIS L K+N + KML GLVP+ VL+ +LISN + E A + + +N DL + S +SRK + +R L +++ R L L + A C + K+ P+L YN +I + +DA E+MQ +G +PNQ TF I++ + K G+I A+ + ++M G P +Y ++ L + R+ EAL + M + G+ P K + ++ + A+ A ++F M+ P Y L+ L + + + C+ +I+ G P + IK F
Sbjct: 88 ISRGVEPDATSYAFLFRQLVTSRETLKAEALYVDCILNRGIEPNHSVLNSMAICYCNLGKLEEAKLLFDKLV------DKKLLPCSSTCNELIKGFCGQDRILDGFDVFVEAI-NSEVLLAFSCYNKLVDGLCFRGYLDEALYVFDEMCDRGVPPTVHLFKTLILSLSKRGRVEEAQLLSMDMESYGFVLDKVMYTTLINGYSKIQKMKTAMMLFLRMRKLGCEPDKYTYNTLINGFINLGMFDKGWMLNQQMVEFGLEPDAVSYQIMIAKYCKDHKVDCALTLLNDINQCNVPPSVHSYTALISALYKENRLAEVDDLYRKMLYTGLVPDHVLFFTLISNHPRGSEISLACTFLRAIAKNGCGIDL--------SYIPSPTSRKVTTDIMLDIDRL---LGEIVARNLPLASVAFNIYMIALCLGGELDSAQLC-----MDKMSSLSLQPSLSAYNSMIKCLYQKGLHEDAKFLVEVMQDQGQVPNQATFLIMVNEYCKQGDIQSALEVLDQMEESGLKPSVAIYDSVIGCLGREKRIDEALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHELFITMLEDGVQPSHYAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLIKQF 702
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Match: A0A067FPQ9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043758mg PE=4 SV=1) HSP 1 Score: 926.391 bits (2393), Expect = 0.000e+0 Identity = 474/942 (50.32%), Postives = 630/942 (66.88%), Query Frame = -2
Query: 1173 EQLINRGLLSSARKLFQRVVSNSSPVSDALSTVDFVTSRGLDLDLSTYAVLIKKLVQSGHLPLAYSFYSDYIIGRGIIPDSSIANSIVICLCKLGKLEEATILFDRLLTDNSCE-KPAFNALVRLLCSQERFLDAFDYFIKMININVNLGCWYYNVLIDGLCQKGYLEEAIQMFDLMPERTESLPTLHLYKSLFYGLCKQGWVVEAESLFGKMESQGFFVDKTMYTSLINVYCKGRKMKMALRVYYRMLKMGCRPDSYTYNTLIHGFVKMGLFDYGWVLFNQMMEQGLQPSVVTFHVMISNYCREGKVDCASMLLNNMISKNLAPNAHCYTVLITSLYKENRITEAEEFYERMLNGGLVPDHVLFFKLMKMYPKGYELDIAFMVLKAIALNGCGFDPLLLPVSAN----EELEQKIVILIEEILKSNLHLAKVAFNVLISALCEQAQQDSASYFMDKMESLGCMPLLFTYNSLIKCLSQKGLFEDAESLLNRMQAQGIFPDQATCLIIINEHCKHGNLEPAFDILDQMEDRGMKPGVAIYNCIIGSLFRQKKVSEATAMFVRMLESGVDPDEIIYLTMINGFSNNGRVIEADRLFHEMIGAAIRPTSHSYTALISGLVKKNMTDKGCTYLEKMLDDGLVPNAVLYTSLISNFLQKREFEFAFRLVDLMDRNQIERDLIFYISLVSGFYRSISSRKRWFAMRRGSERAREKLFQLLHRQSLLPKEKNLRVSDSSPEAMKCFALKLIQKVKQTRFMPNLYLYNVIISGFCEADRMQDAYDHFELMQKEGVLPNQVTFTILMGGHIKAGEIDHAIGLFNKMNADGCTPDGIVYKILVNGLCQASRLLEALSLLHVMHKRGLIPSKGTYEIILQYFCDSYLAVPAFKIFEEMVVYSPGPQLYYCNWLLCILCVQQKLREACIVYDSIIQRGKYPYKPTKSLFIKTF 3983
+QLINRGL++SA+++ QR+++NS+ +SDALS DF RG+ D +Y+ L+KKL++ G A Y + + LG +E+A FDRL++ N K A +++R L ++E+FL+AFDYFIK+ N V+L CW YNVLIDGLC KG+L+E +++ ++M ++ +P LH YKSLFY LCK VEAES +MESQGF+VDK MYTSLIN YC R MKMA+R+++RMLK GC PDSYT NTLIHGF KMGLFD GWVL++QM + G QP++VT +MISNYCREG+VD A MLLN+ +S NLAP+ HCYTVLI +LYK NR+ E +E Y++ML + PDH+L F L+K P+G EL A M+L A GCG DPL +SA +L Q+I +L+ +I+KS+ LA VAF + ISALC+ + + A + ++ + G PL+FT N+LIKC Q G E A +++ MQ +CK GNL+ A DILDQME RG KP VAIY+ IIG L ++K++ EA MF RML++G+DPDE+ + TMING+ N + IEA +LF +M +++P S+ YTALISGLVKK M D GC YL++ML DG VPN VLYT+LI++FL+ EFEFA RL +LM NQIE DLI YI+LVSG R I+ RK+W + R S+ +E LF L + +L+ + K+ S K K++ KVK FMPNLYLYN I C RM DAYDHF++M++EG+ PNQVTF IL+ GHI AGEID AIGLFN+MNADGC PD VY L+ GLCQA RL S+ + MHKRG +P K TYE +L+ FC + L++PAF +F+EM+V+ P L CNWLL ILC ++ EA IV D + +RG+ P T+ + K F
Sbjct: 1 DQLINRGLIASAQQVIQRLIANSASLSDALSAADFAAVRGMRFDSGSYSALMKKLIKFGQSQSALLLYQNDFVA-------------------LGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEKFLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYKSLFYALCKNIRTVEAESFAREMESQGFYVDKLMYTSLINGYCSNRNMKMAMRLFFRMLKTGCEPDSYTCNTLIHGFFKMGLFDKGWVLYSQMSDWGFQPNMVTDLIMISNYCREGEVDAALMLLNSKVSSNLAPSVHCYTVLIDALYKHNRLMEVDELYKKMLANRVAPDHLLSFILLKNCPEGTELQHALMLLCEFAKIGCGIDPLARSISATLNPTGDLCQEIELLLRKIVKSDPKLANVAFTIYISALCKGGKYEKAYVCLFQLVNFGYRPLVFTCNTLIKCFYQVGFLEGANAIVELMQDT-------------EGNCKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDEVFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALISGLVKKGMVDLGCMYLDRMLADGFVPNVVLYTALINHFLRAGEFEFASRLENLMVTNQIEFDLIAYIALVSGVCRRITGRKKWLDVNRCSDSGKEMLFHKLQQGTLVTRTKSTAFSAVFSNGKKGTVQKIVLKVKDIEFMPNLYLYNDIFLLLCGVGRMDDAYDHFQMMKREGLRPNQVTFCILINGHIAAGEIDQAIGLFNQMNADGCVPDKTVYNTLLKGLCQAGRLSHVFSVFYSMHKRGFVPKKATYEHLLECFCANCLSIPAFNMFKEMIVHDHVPCLSNCNWLLNILCQEKHFHEAQIVLDVMHKRGRLPCTSTRGFWRKHF 910 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094142 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094142 ID=g.barbadense_cottongen_reftransV1_0094142; Name=g.barbadense_cottongen_reftransV1_0094142; organism=Gossypium barbadense; type=contig; length=4335bpback to top |