g.barbadense_cottongen_reftransV1_0094108, g.barbadense_cottongen_reftransV1_0094108 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0094108
Unique Nameg.barbadense_cottongen_reftransV1_0094108
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1949
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy Swiss-Prot
Match: CDI_ARATH (Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 8.987e-149
Identity = 202/255 (79.22%), Postives = 228/255 (89.41%), Query Frame = 3 
Query:  816 MTLANGEAHQVT-NNGDLSK-PFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNA 1574
            MT++NG+    T NNG   K PF+IFVGYDPREDLAY+VC HSI KRSS+PVEITPI+QSDLR+KGLYWRER +LESTEFSFSRFLTP+L++Y GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L+PE+VN QTGAFLHRFQWLED+EIGSIP +WNFLEGHN+VVE D  T PKA+HYTRGGPWF+AWK+CEFADLWLNEM +Y +E K  A
Sbjct:    1 MTISNGDVKSETCNNGSSEKKPFRIFVGYDPREDLAYQVCHHSITKRSSIPVEITPIIQSDLRKKGLYWRERGQLESTEFSFSRFLTPHLSDYQGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEIVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYNKENKKEA 255
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: V4JU37_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10019022mg PE=4 SV=1)

HSP 1 Score: 439.884 bits (1130), Expect = 2.618e-147
Identity = 202/251 (80.48%), Postives = 225/251 (89.64%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSK-PFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            MT++NG++   T N    K PFKIFVGYDPREDLAY+VC HSI KRSS+PVEITPIVQSDLR+KGLYWRER +LESTEFSFSRFLTP+L+NY GWA+F+DCDFLYLADIKEL++LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L PE VN QTGAFLHRFQWLED+EIGS+P +WNFLEGHN+V+END  T PKA+HYTRGGPWF+AWKNCEFADLWLNEM +Y  E K
Sbjct:    1 MTMSNGDSESATCNEPYEKKPFKIFVGYDPREDLAYQVCCHSITKRSSIPVEITPIVQSDLRKKGLYWRERGQLESTEFSFSRFLTPHLSNYQGWAMFVDCDFLYLADIKELVDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLNPEAVNTQTGAFLHRFQWLEDEEIGSVPFVWNFLEGHNRVIENDPTTQPKAVHYTRGGPWFDAWKNCEFADLWLNEMEEYNRENK 251
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: R0I0B0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10020823mg PE=4 SV=1)

HSP 1 Score: 439.499 bits (1129), Expect = 3.962e-147
Identity = 202/255 (79.22%), Postives = 226/255 (88.63%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLS--KPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNA 1574
            MT+ NG+    T N   S  KPF+IFVGYDPREDLAY+VCRHSI KRSS+PVEI PIVQSDLR+KGLYWRER +LESTEFSFSRFLTP+L++Y+GWA+F+DCDFLYLADIKEL +LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L PE+VN QTGAFLHRFQWLED+EIGSIP +WNFLEGHN+VVE D  T PKA+HYTRGGPWF+AWK+CEFADLWLNEM +Y +E K  A
Sbjct:    1 MTITNGDVKSETCNNGFSEKKPFRIFVGYDPREDLAYQVCRHSITKRSSIPVEIIPIVQSDLRKKGLYWRERGQLESTEFSFSRFLTPHLSDYDGWAMFVDCDFLYLADIKELTDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLNPEIVNTQTGAFLHRFQWLEDEEIGSIPFVWNFLEGHNRVVEKDPTTQPKAVHYTRGGPWFDAWKDCEFADLWLNEMEEYSKENKKEA 255
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: I1LFW4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 1.574e-146
Identity = 203/256 (79.30%), Postives = 222/256 (86.72%), Query Frame = 3 
Query:  816 MTLANG--EAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            M+L+NG  EA    +NGD  KPFKIFVGYDPREDLAYEVCRHSILKRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSFSRFLTP LANY GWA+F+DCDFLYLADIKEL  LI+DKYAIMCV HDY PKETTKMDGAVQT+YPRKNWSSMVLYNC HPKN+ LTP+ VN Q GAFLHRFQWLEDD+IGSIP +WNFLEGHN++V ND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM DY+++ K   S
Sbjct:    1 MSLSNGKTEAPLPISNGDEKKPFKIFVGYDPREDLAYEVCRHSILKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFSRFLTPCLANYQGWAMFVDCDFLYLADIKELKNLIEDKYAIMCVQHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCAHPKNRVLTPDTVNTQNGAFLHRFQWLEDDQIGSIPFVWNFLEGHNRIVGNDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEDYMKQAKKEQS 256
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A0B2RSC7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004925 PE=4 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 1.574e-146
Identity = 203/256 (79.30%), Postives = 222/256 (86.72%), Query Frame = 3 
Query:  816 MTLANG--EAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            M+L+NG  EA    +NGD  KPFKIFVGYDPREDLAYEVCRHSILKRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSFSRFLTP LANY GWA+F+DCDFLYLADIKEL  LI+DKYAIMCV HDY PKETTKMDGAVQT+YPRKNWSSMVLYNC HPKN+ LTP+ VN Q GAFLHRFQWLEDD+IGSIP +WNFLEGHN++V ND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM DY+++ K   S
Sbjct:    1 MSLSNGKTEAPLPISNGDEKKPFKIFVGYDPREDLAYEVCRHSILKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFSRFLTPCLANYQGWAMFVDCDFLYLADIKELKNLIEDKYAIMCVQHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCAHPKNRVLTPDTVNTQNGAFLHRFQWLEDDQIGSIPFVWNFLEGHNRIVGNDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEDYMKQAKKEQS 256
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: G7KKM5_MEDTR (Nucleotide-diphospho-sugar transferase superfamily protein OS=Medicago truncatula GN=MTR_6g046960 PE=4 SV=2)

HSP 1 Score: 436.417 bits (1121), Expect = 5.903e-146
Identity = 200/259 (77.22%), Postives = 227/259 (87.64%), Query Frame = 3 
Query:  816 MTLANGEAHQV--TNNGD---LSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            M+L+NG+      T+NGD   +  PFKIFVGYDPRED+A++VCRHSI+KRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSF+RFLTP LANY GWA+F+DCDFLYLADIKEL++LI+DKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTP+ VN+QTGAFLHRFQWLEDDEIGS+P +WNFLEGHN+ VEND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM +Y+ + K   S
Sbjct:    1 MSLSNGKNQSPLPTSNGDGNGIGAPFKIFVGYDPREDIAFQVCRHSIMKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFTRFLTPSLANYQGWAMFVDCDFLYLADIKELVDLIEDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPDAVNSQTGAFLHRFQWLEDDEIGSVPFVWNFLEGHNRAVENDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEEYLTQAKKEKS 259
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: G7K529_MEDTR (Nucleotide-diphospho-sugar transferase superfamily protein OS=Medicago truncatula GN=MTR_5g007050 PE=4 SV=2)

HSP 1 Score: 435.261 bits (1118), Expect = 2.234e-145
Identity = 199/259 (76.83%), Postives = 227/259 (87.64%), Query Frame = 3 
Query:  816 MTLANGEAHQV--TNNGD---LSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            M+L+NG+      T+NG+   +  PFKIFVGYDPRED+A++VCRHSI+KRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSF+RFLTP LANY GWA+F+DCDFLYLADIKEL++LI+DKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTP+ VN+QTGAFLHRFQWLEDDEIGS+P +WNFLEGHN+ VEND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM +Y+ + K   S
Sbjct:    1 MSLSNGKNQSPLPTSNGNGNGIGAPFKIFVGYDPREDIAFQVCRHSIMKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFTRFLTPSLANYQGWAMFVDCDFLYLADIKELLDLIEDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKVLTPDAVNSQTGAFLHRFQWLEDDEIGSVPFVWNFLEGHNRAVENDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEEYLTQAKKEKS 259
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A0B2RQN8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038616 PE=4 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 1.921e-144
Identity = 201/261 (77.01%), Postives = 222/261 (85.06%), Query Frame = 3 
Query:  783 LCYSRKKLLLSMTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            +  S  K    +  +NG   ++ NN    KPFKIFVGYDPREDLAYEVCRHSILKRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSFSRFLTP LANY GWA+F+DCDFLYLADIKEL +LI+DKYAIMCV HDY PKETTKMDGAVQT+YPRKNWSSMVLYNC HPKN+ LTP+ VN QTGAFLHRFQWLEDD IGSIP +WNFLEGHN+VV+ND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM DY+++ K
Sbjct:    1 MVLSNGKTEAPLPSSNGGGAEIDNNE--KKPFKIFVGYDPREDLAYEVCRHSILKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFSRFLTPCLANYQGWAMFVDCDFLYLADIKELKDLIEDKYAIMCVQHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCAHPKNRVLTPDTVNTQTGAFLHRFQWLEDDLIGSIPFVWNFLEGHNRVVDNDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEDYMKQAK 259
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: I1JAP5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 1.921e-144
Identity = 201/261 (77.01%), Postives = 222/261 (85.06%), Query Frame = 3 
Query:  783 LCYSRKKLLLSMTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETK 1565
            +  S  K    +  +NG   ++ NN    KPFKIFVGYDPREDLAYEVCRHSILKRSS+PVEI PI QSDLR+ GLYWRER + ESTEFSFSRFLTP LANY GWA+F+DCDFLYLADIKEL +LI+DKYAIMCV HDY PKETTKMDGAVQT+YPRKNWSSMVLYNC HPKN+ LTP+ VN QTGAFLHRFQWLEDD IGSIP +WNFLEGHN+VV+ND  T PKAIHYTRGGPWFEAWKNCEFADLWLNEM DY+++ K
Sbjct:    1 MVLSNGKTEAPLPSSNGGGAEIDNNE--KKPFKIFVGYDPREDLAYEVCRHSILKRSSIPVEIIPIKQSDLRKSGLYWRERGQFESTEFSFSRFLTPCLANYQGWAMFVDCDFLYLADIKELKDLIEDKYAIMCVQHDYAPKETTKMDGAVQTVYPRKNWSSMVLYNCAHPKNRVLTPDTVNTQTGAFLHRFQWLEDDLIGSIPFVWNFLEGHNRVVDNDPTTSPKAIHYTRGGPWFEAWKNCEFADLWLNEMEDYMKQAK 259
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: A0A078DQI3_BRANA (BnaC02g16290D protein OS=Brassica napus GN=BnaC02g16290D PE=4 SV=1)

HSP 1 Score: 431.024 bits (1107), Expect = 5.173e-144
Identity = 196/254 (77.17%), Postives = 228/254 (89.76%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEETKLNAS 1577
            MT++NG+    T+N      F+IFVGYDPREDLAY+VC HSI KRSS+PVEITPIVQSDLRE+GLYWRERN+LESTEFSF+RFLTP+L++Y GWA+F+DCDFLYL+DIKEL++LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK L+PE VN QTGAFLHRFQWLED+EIGS+P +WNFLEGHN+VVEND  T PKA+H+TRGGPWF+AWKNC+FADLWL+EM +Y +E   NA+
Sbjct:    1 MTMSNGDLK--TSNAS----FRIFVGYDPREDLAYQVCHHSITKRSSIPVEITPIVQSDLRERGLYWRERNQLESTEFSFTRFLTPHLSDYQGWAMFVDCDFLYLSDIKELVDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLSPEAVNTQTGAFLHRFQWLEDEEIGSVPFVWNFLEGHNRVVENDPATQPKAVHFTRGGPWFDAWKNCDFADLWLSEMEEYSKENNKNAN 248
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Match: M4E154_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra022502 PE=4 SV=1)

HSP 1 Score: 430.254 bits (1105), Expect = 1.031e-143
Identity = 194/248 (78.23%), Postives = 224/248 (90.32%), Query Frame = 3 
Query:  816 MTLANGEAHQVTNNGDLSKPFKIFVGYDPREDLAYEVCRHSILKRSSVPVEITPIVQSDLREKGLYWRERNKLESTEFSFSRFLTPYLANYNGWALFIDCDFLYLADIKELMELIDDKYAIMCVHHDYTPKETTKMDGAVQTLYPRKNWSSMVLYNCGHPKNKGLTPEVVNNQTGAFLHRFQWLEDDEIGSIPSIWNFLEGHNKVVENDSKTFPKAIHYTRGGPWFEAWKNCEFADLWLNEMHDYIEE 1559
            MT++NG++         S PF+IFVGYDPREDLAY+VC HSI KRSS+PVEITPIVQSDLRE+GLYWRERN LESTEFSF+RFLTP+L++Y GWA+F+DCDFLY+ADIKEL++LIDDKYAIMCV HDYTPKETTKMDGAVQT+YPRKNWSSMVLYNCGHPKNK LTPE VN Q+GAFLHRFQWLED+EIGS+P +WNFLEGHN+VVEND  T PKA+H+TRGGPWF+AWKNC+FADLWL+EM +Y +E
Sbjct:    1 MTMSNGDSKT-------STPFRIFVGYDPREDLAYKVCHHSITKRSSIPVEITPIVQSDLRERGLYWRERNNLESTEFSFTRFLTPHLSDYQGWAMFVDCDFLYIADIKELVDLIDDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHPKNKTLTPEAVNTQSGAFLHRFQWLEDEEIGSVPFVWNFLEGHNRVVENDPATQPKAVHFTRGGPWFDAWKNCDFADLWLSEMEEYSKE 241
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CDI_ARATH8.987e-14979.22Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0094108 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4JU37_EUTSA2.618e-14780.48Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
R0I0B0_9BRAS3.962e-14779.22Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
I1LFW4_SOYBN1.574e-14679.30Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RSC7_GLYSO1.574e-14679.30Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
G7KKM5_MEDTR5.903e-14677.22Nucleotide-diphospho-sugar transferase superfamily... [more]
G7K529_MEDTR2.234e-14576.83Nucleotide-diphospho-sugar transferase superfamily... [more]
A0A0B2RQN8_GLYSO1.921e-14477.01Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
I1JAP5_SOYBN1.921e-14477.01Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A078DQI3_BRANA5.173e-14477.17BnaC02g16290D protein OS=Brassica napus GN=BnaC02g... [more]
M4E154_BRARP1.031e-14378.23Uncharacterized protein OS=Brassica rapa subsp. pe... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 97..270
e-value: 5.3E-7
score: 28.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 49..271
NoneNo IPR availablePANTHERPTHR35105FAMILY NOT NAMEDcoord: 28..277
NoneNo IPR availablePANTHERPTHR35105:SF2SUBFAMILY NOT NAMEDcoord: 28..277
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0094108 ID=g.barbadense_cottongen_reftransV1_0094108; Name=g.barbadense_cottongen_reftransV1_0094108; organism=Gossypium barbadense; type=contig; length=1949bp
CAGGAAAAAGCGAATAACTGGCTCCCTTTCCCTCGTTTCATTTCACCGCT
AAATCCTCGCCACAACACATTCATACAAAAATTTCTATTGAATCTAAAAT
AAAAATTGGATAATTTCGAAATTTTAGAGATTAATTTTCTGTTCTTTGAG
TTCCCATTTCTATAAGTAGTCTTCCAAGAGTCTACCTCTTCCCCTTTATT
CTTAATAAACTTTTAGTTCTCTTTCTTCTTTCTTCACTGTCAAGAATTTC
GAGATCCCGCGTTTTCTTCATTTTCTCAGGTATCTCTTTGTTTTGGTTTT
TGGGTCCTCTCTCTCTCTCTCTCTTTTTAGTTTAATTATTGTTTTTCTTT
TCTGGGTTTTAAGCGTATATTTTTGCTGATCTGATTTTTTTTCGTTAATG
GTGCCATGTTTTCTTTGAATTTATGGAATTTTCTGCTAAGTTGGGTTTTT
ATTTATTTGTTTGTTTGATGGATGTGTAGCATTGTGTTGACTGAATTTGA
ATCTCTGTTTCTATTGTTTTAGATTTACGTTTTTCTATGCTTTTCTTGGT
TCCTTTTTACATTAATGGATGCAATGTTAATTCAATAATAAGAGAAATCT
TAAAGTTTCCCTTTCTTGGTTTTGTTTGGCTTCCAAGAATCCACAAGAGA
AAAAAAACAAGTAAAAGAAAAAAAAAGAGTGATATTTCAGTGTGCCATTC
TTAACTAACTGATCCTAGAAAATTTCCCCTTTTTTTGGGGTTTATTTTAT
TATTTTTACTGAATTTTAAAAACTGTGCAGATCTGTGTTATAGTAGAAAA
AAACTGCTGCTATCAATGACTTTGGCTAATGGCGAAGCTCATCAAGTGAC
TAACAATGGCGATTTAAGCAAACCCTTCAAAATCTTTGTCGGTTACGATC
CGCGTGAAGATCTAGCCTATGAGGTCTGCCGCCATTCTATCTTGAAACGT
TCATCGGTTCCTGTCGAGATCACTCCCATTGTTCAATCAGATCTCCGGGA
AAAAGGCCTTTACTGGCGCGAGCGGAACAAGCTCGAGAGTACCGAGTTCT
CGTTTTCCCGGTTCCTGACTCCCTACTTGGCGAATTACAATGGTTGGGCG
CTGTTCATTGACTGTGATTTCCTTTACTTAGCTGATATAAAGGAATTAAT
GGAGTTGATTGATGATAAATATGCGATCATGTGCGTTCATCATGATTATA
CCCCGAAAGAGACCACGAAAATGGATGGTGCAGTGCAGACTTTGTATCCT
CGAAAGAATTGGTCCTCGATGGTGTTGTACAATTGCGGTCATCCGAAGAA
CAAGGGTCTGACTCCAGAAGTTGTAAACAATCAAACGGGCGCTTTTCTTC
ATAGGTTCCAGTGGCTCGAAGATGATGAAATCGGATCGATCCCGTCTATT
TGGAATTTCCTTGAAGGGCATAACAAGGTTGTCGAGAATGACTCAAAAAC
GTTTCCTAAAGCCATACATTATACTCGTGGAGGGCCATGGTTTGAGGCAT
GGAAGAATTGTGAGTTTGCCGATCTTTGGCTGAATGAGATGCATGACTAC
ATCGAAGAAACGAAGTTGAATGCAAGTTAATCAGAATCGGCATGGTGCAT
TGGTAATTTCCTAATTACATGTCAATTTATTCATGCTCCATTTTTATGTT
ATATTCATATATTGAATCTATCTTTGTGTATCCTAGTTCCAATTATGCTT
TAGAGTATATCAGGACGGCTATATATCGATATCGATGCCTCGTGTATGTA
GTTTTTCAATTTTTTTCATTTGTTTCAGTGACTACATATGGGAATATATG
ATCCTTGGAATGTTGGGCAGTATCTTTAGTTGATTAATGAAAGGTCTTTC
ATTTGTTTGTGAATTATGCTTGGTTGGTTGCTGCAAATATTTCTATTTTG
GGTTTCAATTGCTTCAAATAGCGGTCTCGGGATGGCATTCATTAGCGAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans