g.barbadense_cottongen_reftransV1_0094088, g.barbadense_cottongen_reftransV1_0094088 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_STRPN (Peptide chain release factor 2 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=prfB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.055e-44 Identity = 77/155 (49.68%), Postives = 115/155 (74.19%), Query Frame = -2 Query: 259 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHS 723 TSF+ VEVMP L +D+++VE+ E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY +VKD RT FE + + VMDG+LD FI AYLK++ S Sbjct: 211 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 364 HSP 2 Score: 147.902 bits (372), Expect = 3.924e-37 Identity = 82/216 (37.96%), Postives = 132/216 (61.11%), Query Frame = -2 Query: 1279 DFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1926 D +R+ ++ E++ R S ++ LE+E+ +LE+K + FW+D AQ+T L ++K+ N ++ + ++ E +++ E D ++ +E V + +L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMYTR+G + +K V++ G+EAGIKSVT+ EG AYG L E G HR+VR SPF++ R + Sbjct: 2 DISVIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_STRU0 (Peptide chain release factor 2 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=prfB PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.135e-44 Identity = 76/153 (49.67%), Postives = 112/153 (73.20%), Query Frame = -2 Query: 265 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYK 723 TSF+ VEVMP L +D+++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT FE + + VMDGE+D FI AYLK++ Sbjct: 211 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362 HSP 2 Score: 135.961 bits (341), Expect = 4.724e-33 Identity = 81/212 (38.21%), Postives = 122/212 (57.55%), Query Frame = -2 Query: 1279 LRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1914 +R+ + E++ R S + LE+E+ +LE+K + FW+D AQ+T L +K ++ ++ E + + E +SI L E V L + L ++E+T LLS PYD A++ I G+GGT+AQDWADML RMYTR+G + +K ++ G+EAGIKSVT+ EG AYG+L E G HR+VR SPF++ R + Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFHDMLELSDETELYLEMLAEDESIKEELEEALVK----LEQILSQYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_CLOP1 (Peptide chain release factor 2 OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) GN=prfB PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 3.876e-44 Identity = 80/150 (53.33%), Postives = 104/150 (69.33%), Query Frame = -2 Query: 274 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYL 723 QTSF+ VEV+P L D D+E+ DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT ETS++ VMDG++D FI AYL Sbjct: 212 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 HSP 2 Score: 159.844 bits (403), Expect = 2.805e-41 Identity = 88/201 (43.78%), Postives = 126/201 (62.69%), Query Frame = -2 Query: 1279 VNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1881 + E+ S + LEK+ LE K ++ FWDD KAQE VKDKI+ +++D E + L EE D A +E ++ +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMYTRW EK+ Y ++ G+EAG+KSVT++V+G +AYGYL EKG HR+VR SPFNA G RQ + Sbjct: 17 LKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 214
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_STRA1 (Peptide chain release factor 2 OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) GN=prfB PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.385e-44 Identity = 76/153 (49.67%), Postives = 112/153 (73.20%), Query Frame = -2 Query: 265 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYK 723 TSF+ VEVMP L +D+++VE+ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT FE + + VMDGE++ FI AYLK++ Sbjct: 211 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 HSP 2 Score: 140.198 bits (352), Expect = 1.834e-34 Identity = 81/212 (38.21%), Postives = 130/212 (61.32%), Query Frame = -2 Query: 1279 LRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1914 +R+ + E++ R S + +LE+E+ +LE++ + FW+D AQ+T L ++K K + + + ++ E ++ + +E DS+ L E N+++ L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+LLRMYTR+G +K V++ G+EAGIKSVT+ EG AYG L E G HR+VR SPF++ R + Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDSLKEELEE---NLMQ-LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_THEP1 (Peptide chain release factor 2 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=prfB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.720e-43 Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 268 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKY 723 TSF+ V V+P + +D VD+E+ EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ WG QIR+YVFHPY +VKD RTG ET+++ +VMDG++D FI+A L Y Sbjct: 211 HTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQGELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 361 HSP 2 Score: 137.502 bits (345), Expect = 1.766e-33 Identity = 80/214 (37.38%), Postives = 124/214 (57.94%), Query Frame = -2 Query: 1279 YALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1920 + R +E ++ +I + ++++E+ +E K D S WDD+ KA+E L +K+ L ++ ED E + L++E D + + ++++L A+ + EL +L+G YD A +S+ GAGGT++QDWA MLLRMY RW E++ + +VE GEEAGIK TI ++G YAYGYL E G HR+VR SPF+A R + Sbjct: 4 FETRTRMEELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_THESQ (Peptide chain release factor 2 OS=Thermotoga sp. (strain RQ2) GN=prfB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.736e-43 Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 268 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKY 723 TSF+ V V+P + +D VD+E+ EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG++D FI+A L Y Sbjct: 211 HTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 361 HSP 2 Score: 137.117 bits (344), Expect = 1.887e-33 Identity = 80/214 (37.38%), Postives = 123/214 (57.48%), Query Frame = -2 Query: 1279 YALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1920 + + +E ++ ++ + ++ KEL +E K D S WDD+ KA+E L +K+ L ++ ED E + L++E D + + ++++L A+ + EL +L+G YD A +S+ GAGGT++QDWA MLLRMY RW E++ + +VE GEEAGIK TI ++G YAYGYL E G HR+VR SPF+A R + Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_STRPG (Peptide chain release factor 2 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=prfB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.757e-43 Identity = 75/153 (49.02%), Postives = 112/153 (73.20%), Query Frame = -2 Query: 265 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYK 723 TSF+ VEVMP L +++++VE+ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT FE + + VMDGE++ FI AYLK++ Sbjct: 211 HTSFASVEVMPEL-DNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 HSP 2 Score: 139.813 bits (351), Expect = 2.556e-34 Identity = 81/212 (38.21%), Postives = 129/212 (60.85%), Query Frame = -2 Query: 1279 LRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1914 +R+ + E++ R S + +LE+E+ +LE+ + FW+D AQ+T L ++K K + + + ++ E ++ + +E DS+ L E N+++ L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+LLRMYTR+G +K V++ G+EAGIKSVT+ EG AYG L E G HR+VR SPF++ R + Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDSLKEELEE---NLMQ-LDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTS 213
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_THEMA (Peptide chain release factor 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=prfB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.056e-43 Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = -2 Query: 268 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKY 723 TSF+ V V+P + +D VD+E+ EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG++D FI+A L Y Sbjct: 213 HTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 363 HSP 2 Score: 137.502 bits (345), Expect = 1.805e-33 Identity = 80/214 (37.38%), Postives = 123/214 (57.48%), Query Frame = -2 Query: 1279 YALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1920 + + +E ++ ++ + ++ KEL +E K D S WDD+ KA+E L +K+ L ++ ED E + L++E D + + ++++L A+ + EL +L+G YD A +S+ GAGGT++QDWA MLLRMY RW E++ + +VE GEEAGIK TI ++G YAYGYL E G HR+VR SPF+A R + Sbjct: 6 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRRHTS 215
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_CLOPS (Peptide chain release factor 2 OS=Clostridium perfringens (strain SM101 / Type A) GN=prfB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.355e-43 Identity = 79/150 (52.67%), Postives = 103/150 (68.67%), Query Frame = -2 Query: 274 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYL 723 QTSF+ VEV+P L D D+E+ DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT ETS++ VM G++D FI AYL Sbjct: 214 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 HSP 2 Score: 159.458 bits (402), Expect = 3.067e-41 Identity = 88/201 (43.78%), Postives = 126/201 (62.69%), Query Frame = -2 Query: 1279 VNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 1881 + E+ S + LEK+ LE K ++ FWDD KAQE VKDKI+ +++D E + L EE D A +E ++ +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMYTRW EK+ Y ++ G+EAG+KSVT++V+G +AYGYL EKG HR+VR SPFNA G RQ + Sbjct: 19 LKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 216
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Match: RF2_OENOB (Peptide chain release factor 2 OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) GN=prfB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 3.640e-42 Identity = 78/155 (50.32%), Postives = 107/155 (69.03%), Query Frame = -2 Query: 259 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHS 723 TSF ++VMP L +D +++E+ +D+++ R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG LD FI AYLK+K S Sbjct: 213 HTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLS 367 HSP 2 Score: 121.709 bits (304), Expect = 3.636e-28 Identity = 73/213 (34.27%), Postives = 112/213 (52.58%), Query Frame = -2 Query: 1273 RKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVTSV 1911 R + E+++ R++ + L+ + E K + FWDD+ AQ+ + +K++ + + VED + L E D DA + E I+ K L+++ L QLL+ YD A++ I G GGT++ DWA L RMYTRW + +K V + G+ AGI S T+ + G AYG+L EKG HR VR SPF++ G R + V Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFV 217
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A0D2R4L4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G264100 PE=4 SV=1) HSP 1 Score: 530.406 bits (1365), Expect = 1.380e-177 Identity = 292/299 (97.66%), Postives = 295/299 (98.66%), Query Frame = -2 Query: 1279 MEAILNPLLSSPTILKPTNPFSLSNVNKAXXXXXXXXXXXXXXXXSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2175 M+AILNPLLSSPTILKPTNPFSLSNVNKAPFLLSLTHFTTTSFPFSAILS+PPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVE ASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVI DLNKALDRFELTQLLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 1 MDAILNPLLSSPTILKPTNPFSLSNVNKAPFLLSLTHFTTTSFPFSAILSTPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVETASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVINDLNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 299 HSP 2 Score: 325.094 bits (832), Expect = 2.309e-98 Identity = 156/157 (99.36%), Postives = 157/157 (100.00%), Query Frame = -2 Query: 253 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSIN 723 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKAL+RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSIN Sbjct: 297 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALTRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSIN 453
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A0B0N7A0_GOSAR (Peptide chain release factor 2 OS=Gossypium arboreum GN=F383_11471 PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 2.360e-176 Identity = 292/299 (97.66%), Postives = 294/299 (98.33%), Query Frame = -2 Query: 1279 MEAILNPLLSSPTILKPTNPFSLSNVNKAXXXXXXXXXXXXXXXXSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2175 MEAILNPLLSS TILKP NPF LSNVNKAPFLLSLTHFTTTSFPFSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEGAVISIAAGAGGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKS TIEVEGR+AYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 1 MEAILNPLLSSSTILKPANPFYLSNVNKAPFLLSLTHFTTTSFPFSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEGAVISIAAGAGGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSATIEVEGRFAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 299 HSP 2 Score: 327.791 bits (839), Expect = 2.442e-99 Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+SVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS Sbjct: 297 QTSFSGVEVMPLLPEESVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 455
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A061F5D6_THECC (High chlorophyll fluorescent 109 isoform 2 OS=Theobroma cacao GN=TCM_025105 PE=4 SV=1) HSP 1 Score: 448.358 bits (1152), Expect = 1.107e-145 Identity = 244/302 (80.79%), Postives = 261/302 (86.42%), Query Frame = -2 Query: 1279 MEAILNPLLSSPTILKPTNPFSLSN---VNKAXXXXXXXXXXXXXXXXSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2175 MEAIL PLLSS T++KP P S S+ +NK P LLSL T + + S P RFTSSV YAT +SQL+EGV+T+TREWVMQDFYALRKDVE ASERV EI S G+Q LEKEL LESK ADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIV LTEEMD+IDAALLEEAV+VIK+LNKALDRFELTQLLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMY RWGEKQKYKT+VVEKSLGEEAG+KS TIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 1 MEAILKPLLSSTTMIKPPKPSSFSSYTSINKVPVLLSLAPLLTATSFSFTAILSAPSRFTSSVIYATPESQLTEGVDTNTREWVMQDFYALRKDVETASERVEEIIASTGLQLLEKELADLESKAADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVKLTEEMDAIDAALLEEAVSVIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQKYKTKVVEKSLGEEAGLKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 302 HSP 2 Score: 319.701 bits (818), Expect = 2.306e-96 Identity = 151/159 (94.97%), Postives = 158/159 (99.37%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSF+GVEVMPLLPE+SVDVELPEEDLEI+FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDI SVMDGELDAFIKAYLK+K+S++VS Sbjct: 300 QTSFAGVEVMPLLPEESVDVELPEEDLEITFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIASVMDGELDAFIKAYLKHKYSMSVS 458
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A061EYJ6_THECC (High chlorophyll fluorescent 109 isoform 1 OS=Theobroma cacao GN=TCM_025105 PE=4 SV=1) HSP 1 Score: 431.024 bits (1107), Expect = 6.369e-138 Identity = 244/334 (73.05%), Postives = 261/334 (78.14%), Query Frame = -2 Query: 1279 MEAILNPLLSSPTILKPTNPFSLSN---VNKAXXXXXXXXXXXXXXXXSAILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQ--------------------------------DFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2175 MEAIL PLLSS T++KP P S S+ +NK P LLSL T + + S P RFTSSV YAT +SQL+EGV+T+TREWVMQ DFYALRKDVE ASERV EI S G+Q LEKEL LESK ADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIV LTEEMD+IDAALLEEAV+VIK+LNKALDRFELTQLLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMY RWGEKQKYKT+VVEKSLGEEAG+KS TIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 1 MEAILKPLLSSTTMIKPPKPSSFSSYTSINKVPVLLSLAPLLTATSFSFTAILSAPSRFTSSVIYATPESQLTEGVDTNTREWVMQGSEAVGMLPWFYGHYHCFEVVGFNANKVLDFVDFYALRKDVETASERVEEIIASTGLQLLEKELADLESKAADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVKLTEEMDAIDAALLEEAVSVIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQKYKTKVVEKSLGEEAGLKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 334 HSP 2 Score: 310.842 bits (795), Expect = 3.768e-92 Identity = 149/155 (96.13%), Postives = 154/155 (99.35%), Query Frame = -2 Query: 259 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHS 723 QTSF+GVEVMPLLPE+SVDVELPEEDLEI+FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDI SVMDGELDAFIKAYLK+K+S Sbjct: 332 QTSFAGVEVMPLLPEESVDVELPEEDLEITFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIASVMDGELDAFIKAYLKHKYS 486
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: B9RM42_RICCO (Peptide chain release factor, putative OS=Ricinus communis GN=RCOM_1077620 PE=4 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 2.876e-124 Identity = 201/243 (82.72%), Postives = 218/243 (89.71%), Query Frame = -2 Query: 1279 TSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2007 +SSV YA DSQL+ GV+T TREW MQDFY+LR+DVE ASERV EIRTSAG+QQLE+E+ LESK A++SFWDDRA AQETLLALTDVKDKI LL EFKTKVEDAETIV LTEEMDSID LLEEA ++IK+LNK+L+RFELTQLLSGPYDKE AVISI AGAGGTDAQDWADMLLRMY RWGEKQ+YKTRVVEKS GEEAGIKS IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 58 SSSVIYAAPDSQLNVGVDTETREWAMQDFYSLRRDVEAASERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFKTKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 300 HSP 2 Score: 312.768 bits (800), Expect = 9.498e-94 Identity = 147/159 (92.45%), Postives = 156/159 (98.11%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSG+EVMPLLPE+S+DVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSD+ SVMDGEL+AFIKAYLKYK+S+ +S Sbjct: 298 QTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYKYSMTLS 456
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: W9RF34_9ROSA (Peptide chain release factor 2 OS=Morus notabilis GN=L484_005584 PE=4 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 1.345e-122 Identity = 202/248 (81.45%), Postives = 215/248 (86.69%), Query Frame = -2 Query: 1279 PPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2022 P RF V YAT + Q+ V REW MQDFY+LRKDVE SERV EIR SAG+QQLE+EL VLESK ADSSFWDDRAKAQETLLALTDVKDKI LL+EFK KVEDAETI+ LTEEMDSID ALLEEA +IK+LNKALDRFELT+LLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMY RWGEKQ+YKTRVVEKS GEEAGIKS TIEVEGRYAYGYLSGEKGTHRIVRQSPFN+KGLRQ + Sbjct: 53 PLSRFPPYVLYATQERQVGTEVNNDVREWAMQDFYSLRKDVETVSERVEEIRASAGLQQLEEELAVLESKAADSSFWDDRAKAQETLLALTDVKDKIKLLSEFKAKVEDAETIIMLTEEMDSIDTALLEEANTIIKELNKALDRFELTELLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTS 300 HSP 2 Score: 306.605 bits (784), Expect = 1.998e-91 Identity = 144/159 (90.57%), Postives = 156/159 (98.11%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+S+++E+P+EDL+ISFSRAGGKGGQNVNKVETAVRITHIPTGVT+RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG ETSDIVSVMDGEL+ FIKA+LKYK+S+ VS Sbjct: 298 QTSFSGVEVMPLLPEESINIEIPDEDLDISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGLETSDIVSVMDGELEPFIKAFLKYKYSMAVS 456
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: D7SPM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00870 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.105e-121 Identity = 200/248 (80.65%), Postives = 215/248 (86.69%), Query Frame = -2 Query: 1279 PPRFTSSVTYATSDSQLSEGVETSTR-EWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2019 P RF+ V +A+ +SQL V T T EW MQDFY LR+DVE SER EIR SAG+QQLE+EL LE K ADSSFWDDRAKAQETLLALTDVKDKI LL +FKT+VEDAETIV LTEEMDSID LLEEA N+IK+LNKALDRFELTQLLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMY RWGEKQ+YKTRVVEKS+GEEAGIKS TIE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 45 PSRFSPHVLFASPESQLDMEVTTETSSEWAMQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 292 HSP 2 Score: 307.76 bits (787), Expect = 4.884e-92 Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+S+DVE+PEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDI SVMDGEL+ FIKAYLK+K S+ +S Sbjct: 290 QTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 448
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A067JVR4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18056 PE=4 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 2.128e-119 Identity = 211/302 (69.87%), Postives = 236/302 (78.15%), Query Frame = -2 Query: 1279 MEAILNPLLSSPTILKPTNPFSLSNVNKAXXXXXXXXXXXXXXXXSAILSS---PPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2175 ME ++ PL SS T+L LS+ K+ LLS+ ++ SS R SS+ YA ++QL GV+T T EW MQDFY+LR+DVE ASERV EI SAGMQ L++EL LE+K ADSS WDDRA+AQE L ALTDVKDKI LL EFKT VEDAETIV LTEEMDS DA LLEEA ++K+LNK+LDRFELTQLLSGPYDKEGAVISI AGAGGTDAQDWADMLLRMY RWGEKQ+YKTRVVEKS GEEAGIKSVTIE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 1 MEGLVCPLYSSNTVLASAK---LSHNIKSSVLLSVNPSVSSPHRTILAFSSVLATSSRLPSSIIYAAPENQLDVGVDTETGEWAMQDFYSLRRDVEAASERVEEIIASAGMQLLQQELAGLEAKAADSSLWDDRARAQEILSALTDVKDKIKLLTEFKTMVEDAETIVKLTEEMDSTDAGLLEEATAIVKELNKSLDRFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYLRWGEKQRYKTRVVEKSPGEEAGIKSVTIEIEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 299 HSP 2 Score: 309.686 bits (792), Expect = 1.406e-92 Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+S+DVE+PEEDLEI+FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDI SVMDGEL+ FIKAYLKYK+S+ +S Sbjct: 297 QTSFSGVEVMPLLPEESMDVEIPEEDLEITFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDINSVMDGELEPFIKAYLKYKYSMAMS 455
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: B9HHX5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07570g PE=4 SV=2) HSP 1 Score: 375.17 bits (962), Expect = 1.657e-117 Identity = 199/257 (77.43%), Postives = 217/257 (84.44%), Query Frame = -2 Query: 1279 LSSPPPRFTSSVTYATSDSQLSEGVETST------REWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2031 L S P R SSV YAT DSQLS G +T T REW MQDFY+LRKDVE AS+RV E+R S+G+ LE+EL LESK ADSS WDDRAKAQETLLALTDVKDKI LL EFKTKVE+AETIV LTEEMDS DA LEEA +IK+LNKALD++ELTQLLSGPYDKEGAV+SI AGAGGTDAQDWADMLLRMY RWGEKQ+YKT+VVE S GEEAGIKS T+EVEGRYAYGYLSGEKGTHRIVRQSPFN+KGLRQ + Sbjct: 49 LFSAPSRSFSSVIYATPDSQLSVGADTDTDTDTDTREWAMQDFYSLRKDVETASQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFKTKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTS 305 HSP 2 Score: 306.99 bits (785), Expect = 1.350e-91 Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+S+DVELPEEDLEIS SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL+NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG ETSDI SVMDGELD FI+AYLK+K+S+ +S Sbjct: 303 QTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYLKHKYSMTLS 461
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Match: A0A059D2I3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01462 PE=4 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 4.854e-116 Identity = 191/252 (75.79%), Postives = 217/252 (86.11%), Query Frame = -2 Query: 1279 ILSSPPPRFTSSVTYATSDSQLSEGVETSTREWVMQDFYALRKDVEMASERVNEIRTSAGMQQLEKELVVLESKTADSSFWDDRAKAQETLLALTDVKDKINLLNEFKTKVEDAETIVNLTEEMDSIDAALLEEAVNVIKDLNKALDRFELTQLLSGPYDKEXXXXXXXXXXXGTDAQDWADMLLRMYTRWGEKQKYKTRVVEKSLGEEAGIKSVTIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQVT 2034 + SS R SV + S+ QLS+ VE + EW MQDFY+LR++VE AS RV +IR SAG+QQLEKEL LE K +D+SFWDDRAKAQ+TLLALTDVKDKI LL++FKT+VE+AET+V LTEEMDS D LLEEA +IK+LNKALDRFELT+LLSGPYDKEGAV+SI AGAGGTDAQDWADMLLRMY RWGEKQ+YKTRVVEKS+GEEAGIKS T+EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ + Sbjct: 38 VPSSSRFRSVGSVVCSASNDQLSQSVEADSSEWAMQDFYSLRREVEAASARVVDIRASAGLQQLEKELADLELKASDASFWDDRAKAQQTLLALTDVKDKIRLLSDFKTQVEEAETVVMLTEEMDSKDTGLLEEAAGIIKELNKALDRFELTELLSGPYDKEGAVVSITAGAGGTDAQDWADMLLRMYARWGEKQRYKTRVVEKSMGEEAGIKSATLEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 289 HSP 2 Score: 305.449 bits (781), Expect = 4.162e-91 Identity = 144/159 (90.57%), Postives = 154/159 (96.86%), Query Frame = -2 Query: 247 QTSFSGVEVMPLLPEDSVDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGFETSDIVSVMDGELDAFIKAYLKYKHSINVS 723 QTSFSGVEVMPLLPE+S++VE+PEEDLEI+FSRAGGKGGQNVNKVETAVRITHIPTGVT+RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDI SVMDGELD FIK YLKYK+S++ S Sbjct: 287 QTSFSGVEVMPLLPEESLNVEIPEEDLEITFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDISSVMDGELDPFIKTYLKYKYSMSQS 445 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094088 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094088 ID=g.barbadense_cottongen_reftransV1_0094088; Name=g.barbadense_cottongen_reftransV1_0094088; organism=Gossypium barbadense; type=contig; length=2365bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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