g.barbadense_cottongen_reftransV1_0094087, g.barbadense_cottongen_reftransV1_0094087 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0094087
Unique Name	g.barbadense_cottongen_reftransV1_0094087
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2326

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 883.634 bits (2282), Expect = 0.000e+0
Identity = 413/540 (76.48%), Postives = 469/540 (86.85%), Query Frame = -3

Query:  363 DQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1982
            +  Q  + IFRS LPDIYIP HLPLH+YCFEN+S+F  RPCLING   +IYTYAEV LT RKVA GLN LGIQQ D IM+LL NSPEF+FAF+GAS+ GAIST ANP +TPAE+ KQA AS  K++ITQ+ +  KVK +A +ND+K++ ID+ PEGCLHFSELT+++E EIP VKI  DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGEN NLY H +DV++CVLPLFHIYSLNS+LLC LRVGAAILIMQKF+I   +EL++KYKV+I PFVPPIVLA++KSP++D YDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP + KSGACGTVVRNAEMKIVDP TG SLP+NQ GEICIRG QIMKGYLND EAT  TIDK+GWLHTGDIG+ID+DDELFIVDRLKELIKYKGFQVAPAE+EA+L+ HPNISDA VVPMKDE AGEVPVAFVVRSNGS ITED++K FISKQV+FYKR+ RVFF + +PKSPSGKILRKDLRARLAA V N
Sbjct:    8 ETKQSGDLIFRSKLPDIYIPKHLPLHSYCFENISEFSSRPCLINGANDQIYTYAEVELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVKQAKASSAKIIITQSCFVGKVKDYASENDVKVICIDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSEDVLMCVLPLFHIYSLNSILLCGLRVGAAILIMQKFDIAPFLELIQKYKVSIGPFVPPIVLAIAKSPIVDSYDLSSVRTVMSGAAPLGKELEDAVRTKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAEIEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSAITEDEVKDFISKQVIFYKRVKRVFFVETVPKSPSGKILRKDLRARLAAGVPN 547

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL2_TOBAC (4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 859.751 bits (2220), Expect = 0.000e+0
Identity = 421/543 (77.53%), Postives = 474/543 (87.29%), Query Frame = -3

Query:  363 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1991
            ME D  Q V+ IFRS LPDIYIPNHLPLH+YCFEN+S+F  RPCLING   +IYTYA+V L +RKVA GL+  GIQ  D IM+LL NSPEF+FAF+GAS+ GAIST ANP +TPAE+ KQA AS  K+++TQA +  KVK +A +ND+KI+ ID+ PEGCLHFS LT+ANE +IP V+I  DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLY H +DV+LCVLPLFHIYSLNSVLLC LRVGAAILIMQKF+IV+ +EL+++YKVTI PFVPPIVLA++KSP++D YDLSS+R VMSG AP+GKELED VR + PNAKLGQGYGMTEAGPVLAM LAFAKEP E KSGACGTVVRNAEMKIVDP TG SLP+NQSGEICIRG QIMKGYLND EAT  TIDK+GWL+TGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEA+L+ HPNISDA VVPMKDE AGEVPVAFVVRSNGS ITED++K FISKQV+FYKR+ RVFF DAIPKSPSGKILRKDLRA+LAA + N
Sbjct:    1 MEKDTKQ-VDIIFRSKLPDIYIPNHLPLHSYCFENISEFSSRPCLINGANKQIYTYADVELNSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIIVTQACHVNKVKDYAFENDVKIICIDSAPEGCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDLSSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATARTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVDAIPKSPSGKILRKDLRAKLAAGLPN 542

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL1_SOLTU (4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1)

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 411/543 (75.69%), Postives = 470/543 (86.56%), Query Frame = -3

Query:  363 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1991
            M+ +  Q  + IFRS LPDIYIP HLPLH+YCFEN+S+F  RPCLI+G   +IYTYAEV LT+RKVA GLN LGIQQ D IM+LL N PEF+FAF+GAS+ GAIST ANP +TPAE+ KQA AS  K++ITQA +A KVK +A +ND+K++ +D+ PEGC+HFSEL +++E EIP VKI  DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGEN NLY H  DV++CVLPLFHIYSLNSVLLC+LRVGAAILIMQKF+I   +EL+ K+KVTI PFVPPIVLA++KSP++D YDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP + KSGACGTVVRNAEMKIVDP TG SLP+NQ GEICIRG QIMKGYLND EAT  TI+K+GWLHTGDIG+IDDDDELFIVDRLKELIKYKGFQVAPAELEA+LI HP+ISDA VVPM DE AGEVPVAFVVRSNGS ITED++K FISKQV+FYKR+ RVFF + +PKSPSGKILRKDLRARLAA ++N
Sbjct:    3 MDTETKQSGDLIFRSKLPDIYIPKHLPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSVPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAAGISN 545

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0
Identity = 410/543 (75.51%), Postives = 469/543 (86.37%), Query Frame = -3

Query:  363 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1991
            M+ +  Q  + IFRS LPDIYIP HLPLH+YCFEN+S+F  RPCLI+G   +IYTYAEV LT+RKVA GLN LGIQQ D IM+LL N PEF+FAF+GAS+ GAIST ANP +TPAE+ KQA AS  K++ITQA +A KVK +A +ND+K++ +D+ PEGC+HFSEL +++E EIP VKI  DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGEN NLY H  DV++CVLPLFHIYSLNSVLLC+LRVGAAILIMQKF+I   +EL+ K+KVTI PFVPPIVLA++KSP++  YDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP + KSGACGTVVRNAEMKIVDP TG SLP+NQ GEICIRG QIMKGYLND EAT  TI+K+GWLHTGDIG+IDDDDELFIVDRLKELIKYKGFQVAPAELEA+LI HP+ISDA VVPM DE AGEVPVAFVVRSNGS ITED++K FISKQV+FYKR+ RVFF + +PKSPSGKILRKDLRARLAA ++N
Sbjct:    3 MDIETKQSGDLIFRSKLPDIYIPKHLPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSAPEGCVHFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENANLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIGPFVPPIVLAIAKSPLVHNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIMKGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVFFVETVPKSPSGKILRKDLRARLAAGISN 545

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL1_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 836.639 bits (2160), Expect = 0.000e+0
Identity = 404/530 (76.23%), Postives = 463/530 (87.36%), Query Frame = -3

Query:  375 EFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAA 1964
            + IFRS LPDIYIP HLPLHTYCFEN+S+  D+ CLING TG+ +TY++V L +RKVA+GLN LGIQQGD IMLLL NSPE+ FAFLGAS+RGAIST ANPF+T AE+ KQ  AS+ KL+ITQA Y +KVK +A + +I+I+ ID  P+ CLHFS+L EA+E E+P V INSDDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDG+NPNLY H +DV++C+LPLFHIYSLN+VL C LR G  ILIMQKF+IV  +EL++KYKVTI PFVPPIVLA++KSPV+DKYDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP E KSGACGTVVRNAEMKIVDP T ASLP+NQ GEICIRG QIMKGYLND E+T+ TID++GWLHTGDIG+IDDDDELFIVDRLKE+IKYKGFQVAPAELEA+L+ HP ISDA VVPM DE AGEVPVAFVVR+NG   TE++IKQF+SKQVVFYKR+ RVFF DAIPKSPSGKILRKDLRAR+A+
Sbjct:   10 DLIFRSKLPDIYIPKHLPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASQAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVINSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRARIAS 539

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 831.632 bits (2147), Expect = 0.000e+0
Identity = 402/530 (75.85%), Postives = 462/530 (87.17%), Query Frame = -3

Query:  375 EFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAA 1964
            + IFRS LPDIYIP HLPLHTYCFEN+S+  D+ CLING TG+ +TY++V L +RKVA+GLN LGIQQGD IMLLL NSPE+ FAFLGAS+RGAIST ANPF+T AE+ KQ  AS  KL+ITQA Y +KVK +A + +I+I+ ID  P+ CLHFS+L EA+E E+P V I+SDDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDG+NPNLY H +DV++C+LPLFHIYSLN+VL C LR G  ILIMQKF+IV  +EL++KYKVTI PFVPPIVLA++KSPV+DKYDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP E KSGACGTVVRNAEMKIVDP T ASLP+NQ GEICIRG QIMKGYLND E+T+ TID++GWLHTGDIG+IDDDDELFIVDRLKE+IKYKGFQVAPAELEA+L+ HP ISDA VVPM DE AGEVPVAFVVR+NG   TE++IKQF+SKQVVFYKR+ RVFF DAIPKSPSGKILRKDLRA++A+
Sbjct:   10 DLIFRSKLPDIYIPKHLPLHTYCFENISKVGDKSCLINGATGETFTYSQVELLSRKVASGLNKLGIQQGDTIMLLLPNSPEYFFAFLGASYRGAISTMANPFFTSAEVIKQLKASLAKLIITQACYVDKVKDYAAEKNIQIICIDDAPQDCLHFSKLMEADESEMPEVVIDSDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGDNPNLYMHSEDVMICILPLFHIYSLNAVLCCGLRAGVTILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKEIIKYKGFQVAPAELEALLLTHPTISDAAVVPMIDEKAGEVPVAFVVRTNGFTTTEEEIKQFVSKQVVFYKRIFRVFFVDAIPKSPSGKILRKDLRAKIAS 539

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL2_ARATH (4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2)

HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0
Identity = 390/547 (71.30%), Postives = 460/547 (84.10%), Query Frame = -3

Query:  363 EADQHQ-HVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVT-IDAPPEGCLHFSELTEANE---DEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1988
            + DQ Q   + IFRS LPDIYIPNHLPLH Y FEN+S+F  +PCLINGPTG++YTYA+VH+T+RK+A GL+NLG++Q DV+M+LL NSPE +  FL ASF GAI+T+ANPF+TPAEI+KQA AS  KL++TQ+ Y +K+K+   D  + + T  DA PE CL FSELT++ E   D IP  KI+ +DVVALP+SSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLYF+  DVILCVLP+FHIY+LNS++LCSLRVGA ILIM KFEI  L+E +++ KVT+A  VPPIVLA++KSP  +KYDLSS+RMV SG AP+GKELEDA+  + PNAKLGQGYGMTEAGPVLAM+L FAKEP   KSGACGTVVRNAEMKI+DP TG SLP+N+ GEICIRG QIMKGYLND  AT  TIDKDGWLHTGD+G+IDDDDELFIVDRLKELIKYKGFQVAPAELE++LI HP I+D  VV MK+E AGEVPVAFVVRS  S I+ED+IKQF+SKQVVFYKR+ +VFFTD+IPK+PSGKILRKDLRARLA  + N
Sbjct:   11 QNDQKQCSNDVIFRSRLPDIYIPNHLPLHDYIFENISEFAAKPCLINGPTGEVYTYADVHVTSRKLAAGLHNLGVKQHDVVMILLPNSPEVVLTFLAASFIGAITTSANPFFTPAEISKQAKASAAKLIVTQSRYVDKIKNLQNDGVLIVTTDSDAIPENCLRFSELTQSEEPRVDSIPE-KISPEDVVALPFSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFNRDDVILCVLPMFHIYALNSIMLCSLRVGATILIMPKFEITLLLEQIQRCKVTVAMVVPPIVLAIAKSPETEKYDLSSVRMVKSGAAPLGKELEDAISAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKILDPDTGDSLPRNKPGEICIRGNQIMKGYLNDPLATASTIDKDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMKEEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKILRKDLRARLANGLMN 556

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL_VANPL (4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1)

HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0
Identity = 401/535 (74.95%), Postives = 456/535 (85.23%), Query Frame = -3

Query:  396 ADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPE-----GCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKD 1985
            A + Q  + IFRS LPDIYIP +LPLH+YCFEN+S+F  RPCLING T +I+TYA+V L +R+V +GL+ LGI+QGD IM+LL NSPEF+FAFLGASF G+IST ANPF+T  E+ KQA AS  KL+ITQ  Y +KVK +A +N +KI++ID           LHFSELT A+E+E+P V+I+ D VVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLY H  DV+LCVLPLFHIYSLNSVLLC LR G+ ILIMQKFEIV  +EL++KYKVTI PFVPPIVLA++KS V+D YDLSS+R VMSG AP+GKELEDAVR + PNAKLGQGYGMTEAGPVLAM LAFAKEP + KSGACGTVVRNAEMKIVDP TG+SLP+N  GEICIRG QIMKGYLND EAT  TIDK+GWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEA+L+ HP ISDA VVPMKDEAAGEVPVAFVV+SNG  ITED+IKQFISKQV+FYKR+ RVFF +AIPK+PSGKILRKD
Sbjct:    6 AIEEQKKDIIFRSKLPDIYIPKNLPLHSYCFENISKFSSRPCLINGATDEIFTYADVELISRRVGSGLSKLGIKQGDTIMILLPNSPEFVFAFLGASFIGSISTMANPFFTSTEVIKQAKASNAKLIITQGCYVDKVKDYACENGVKIISIDTTTTADDAANILHFSELTGADENEMPKVEISPDGVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYMHSDDVLLCVLPLFHIYSLNSVLLCGLRAGSGILIMQKFEIVPFLELIQKYKVTIGPFVPPIVLAIAKSTVVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPETGSSLPRNHPGEICIRGDQIMKGYLNDPEATARTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPCISDAAVVPMKDEAAGEVPVAFVVKSNGHNITEDEIKQFISKQVIFYKRINRVFFVEAIPKAPSGKILRKD 540

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 370/534 (69.29%), Postives = 450/534 (84.27%), Query Frame = -3

Query:  375 QHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTID-APPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAA 1973
            + VE ++RS LPDI I +HLPLH+YCFE V++F DRPCLI+G T + Y ++EV L +RKVA GL  LG+QQG V+MLLL N  EF F F+GAS RGAI TTANPFY P EIAKQA A+  ++++T A Y EK+    + +D+ ++TID AP EGC H S LTEA+E + PAVKI+ DDVVALPYSSGTTGLPKGVMLTHK LV+S+AQQVDGENPNLYFH  DVILCVLPLFHIYSLNSVLLC+LR GAA LIMQKF + T +EL++KYKVT+AP VPPIVL ++KSP++ +YD+SS+R++MSG AP+GKELEDA+R+R P A  GQGYGMTEAGPVLAMNLAFAK P   KSG+CGTVVRNA++KI+D  TG SLP NQ+GEICIRG +IMKGY+ND E+T  TID++GWLHTGD+ YIDDD+E+FIVDR+KE+IKYKGFQVAPAELEA+L+AHP+I+DA VVP K E AGEVPVAFVV+S  S+I+E +IK+F++KQV+FYK++ RV+F DAIPKSPSGKILRKDLR+RLAA
Sbjct:    6 KKVEHLYRSKLPDIEISDHLPLHSYCFERVAEFADRPCLIDGATDRTYCFSEVELISRKVAAGLAKLGLQQGQVVMLLLPNCIEFAFVFMGASVRGAIVTTANPFYKPGEIAKQAKAAGARIIVTLAAYVEKLADL-QSHDVLVITIDDAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSVAQQVDGENPNLYFHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLIMQKFNLTTCLELIQKYKVTVAPIVPPIVLDITKSPIVSQYDVSSVRIIMSGAAPLGKELEDALRERFPKAIFGQGYGMTEAGPVLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVKEIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKS--SEISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAA 536

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Match: 4CL1_ARATH (4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1)

HSP 1 Score: 784.252 bits (2024), Expect = 0.000e+0
Identity = 388/551 (70.42%), Postives = 459/551 (83.30%), Query Frame = -3

Query:  378 ISPLMEA-DQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTID----AP-PEGCLHFSELTEANEDE---IPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLA 2003
            +S +ME    + + + IFRS LPDIYIPNHL LH Y F+N+S+F  +PCLINGPTG +YTY++VH+ +R++A   + LG+ Q DV+MLLL N PEF+ +FL ASFRGA +T ANPF+TPAEIAKQA AS TKL+IT+A Y +K+K    D+ + IV ID     P PEGCL F+ELT++  +    I +V+I+ DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLYFH  DVILCVLP+FHIY+LNS++LC LRVGAAILIM KFEI  L+EL+++ KVT+AP VPPIVLA++KS   +KYDLSSIR+V SG AP+GKELEDAV  + PNAKLGQGYGMTEAGPVLAM+L FAKEP   KSGACGTVVRNAEMKIVDP TG SL +NQ GEICIRG QIMKGYLN+  AT  TIDKDGWLHTGDIG IDDDDELFIVDRLKELIKYKGFQVAPAELEA+LI HP+I+D  VV MK+EAAGEVPVAFVV+S  S+++EDD+KQF+SKQVVFYKR+ +VFFT++IPK+PSGKILRKDLRA+LA
Sbjct:    8 VSQVMEKQSNNNNSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMKEEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKILRKDLRAKLA 558

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Match: W8QHM4_9LAMI (4-coumarate:coenzyme A ligase 4 OS=Fraxinus mandshurica GN=4CL PE=4 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 423/543 (77.90%), Postives = 478/543 (88.03%), Query Frame = -3

Query:  363 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1991
            ME  + Q  E IFRS LPDIYIP HLPLH+YCFEN+SQF  RPCLING T ++YTYAEV L +RKVA+GLN +GIQQGD IM+LL NSPEF+FAFLGAS+RGA+ST ANPF+ PAE+ KQA AS  KL+ITQ  Y EKVK +A +N +K++ ID PPEGCL FS+LT+A+E+++PAVKIN DD VALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLY H +DV+LCVLPLFHIYSLNSVLLC LRVGAAILIMQKF+IV  +EL++KYKVTI PFVPPIVLA++KSP++DKYDLSS+R VMSG AP+G+ELEDAVR +   AKLGQGYGMTEAGPVLAM LAFAKEP E KSGACGTVVRNAEMKIVD  TGASL +N+SGEICIRG QIMKGYLND EAT+ TIDKDGWLHTGDIG+ID DDELFIVDRLKE+IKYKGFQVAPAE+EA+L+ HPNISDA VVP+KDE AGEVPVAFVV+SNGS ITED+IKQF+SKQV+FYKR+ RVFF DAIPKSPSGKILRKDLRARLAA V N
Sbjct:    1 METKRMQE-EIIFRSKLPDIYIPKHLPLHSYCFENISQFSSRPCLINGDTDEVYTYAEVELISRKVASGLNKIGIQQGDTIMILLPNSPEFVFAFLGASYRGALSTMANPFFKPAEVVKQAKASNAKLIITQGCYVEKVKEYALENSVKVMCIDEPPEGCLLFSDLTKADENDMPAVKINPDDAVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVPFLELIQKYKVTIGPFVPPIVLAIAKSPLVDKYDLSSVRTVMSGAAPLGRELEDAVRSKFSKAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDTETGASLGRNESGEICIRGDQIMKGYLNDPEATERTIDKDGWLHTGDIGFIDADDELFIVDRLKEIIKYKGFQVAPAEIEALLLNHPNISDAAVVPLKDEEAGEVPVAFVVKSNGSNITEDEIKQFVSKQVIFYKRVNRVFFIDAIPKSPSGKILRKDLRARLAAGVPN 542

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Match: D5LNB5_SORAU (p-coumarate:CoA-ligase 2 OS=Sorbus aucuparia PE=2 SV=1)

HSP 1 Score: 892.108 bits (2304), Expect = 0.000e+0
Identity = 430/544 (79.04%), Postives = 477/544 (87.68%), Query Frame = -3

Query:  363 QHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTID---APPEGCL--HFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1979
             H+  EFIFRS L DIY PNHLPLHTYCFEN+SQF DRPCLING  G  +TYA+V LT+RKVA GL+ +GI Q DVIMLLLQN PEF+FAFLGAS  GA+ TTANPFYTPAE+AKQ  AS  +L+ITQ+ Y +KVK FA  ND++I+ +D      +G    HFSELT A+E++IPAVKIN ++VVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLYFH +DVILCVLPLFHIYSLNSV LC LRVGAAILIMQKFEI  L+ELVE YKVTIAPFVPPIVL+++KSP +D+YDLSSIRMVMSG APMGKELED VR +LP+AKLGQGYGMTEAGP L+M LAFAKEP E KSGACGTVVRNAEMKIVDP TGASLP+NQ+GEICIRG+QIMKGYLND EAT+ T+DK GWLHTGDIGYID DDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDA VVPMKDEAAGE+PVAFVVRSNGSKI+EDDIKQ+ISKQVVFY R+GRVFFTD IPK+PSGKILRKDLRA+LAA + N
Sbjct:    4 HHKDDEFIFRSKLSDIYXPNHLPLHTYCFENISQFMDRPCLINGNNGDTFTYADVELTSRKVAAGLHKIGIHQTDVIMLLLQNCPEFVFAFLGASNIGAVVTTANPFYTPAEMAKQGRASNAELIITQSAYVDKVKDFALKNDVQIMVVDNAETEKDGNTYHHFSELTSADENDIPAVKINPENVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSEDVILCVLPLFHIYSLNSVFLCGLRVGAAILIMQKFEITKLLELVENYKVTIAPFVPPIVLSIAKSPDLDRYDLSSIRMVMSGAAPMGKELEDTVRAKLPSAKLGQGYGMTEAGPALSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGASLPRNQAGEICIRGSQIMKGYLNDPEATERTVDKQGWLHTGDIGYIDGDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEIPVAFVVRSNGSKISEDDIKQYISKQVVFYMRIGRVFFTDKIPKAPSGKILRKDLRAKLAASLPN 547

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Match: I1MSS0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 891.723 bits (2303), Expect = 0.000e+0
Identity = 419/535 (78.32%), Postives = 479/535 (89.53%), Query Frame = -3

Query:  366 HVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVA 1970
            H +FIFRS LPDIYIP HLPLHTY F+N+SQFKD PCLIN  TG+ +TYA V LTARKVA+G N LGIQ+GDVI+LLLQN P+F+FAFLGAS+RGA  T ANPFYTPAE+AKQATAS +KL+ITQA Y +KVK FA++ND+K++ +D+ P+G LHFS LTEA+E +IPAVKI+ DDVVALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLYF   DV++CVLPLFHIYSLNSVLLCSLRVGAA+LI+ KFEIV L+ELV+K+ V++APFVPPIVLA++KSP +++YD+SSIRM+MSG APMGKELED+VR +LPNA LGQGYGMTEAGPVL+M LAFAKEP + KSGACGTVVRNAEMKI+DP TGASL +NQ+GEICIRG QIMKGYLND EAT+ TIDK GWLHTGDIGYIDD+DELFIVDRLKELIKYKGFQVAPAELEAML+AHPNISDA VV MKDE AGEVPVAFVVRSNGS I+ED+IKQ+ISKQVVFYKR+ RVFF  +IPK+PSGKI RKDLRA LA D+A
Sbjct:   12 HHDFIFRSKLPDIYIPTHLPLHTYLFQNLSQFKDLPCLINAATGETFTYAAVELTARKVASGFNKLGIQKGDVILLLLQNCPQFVFAFLGASYRGATVTAANPFYTPAEVAKQATASNSKLIITQASYVDKVKDFARENDVKVICVDSAPDGYLHFSVLTEADEGDIPAVKISQDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFRSDDVVVCVLPLFHIYSLNSVLLCSLRVGAAVLIVPKFEIVALLELVQKHNVSVAPFVPPIVLAIAKSPDVERYDVSSIRMIMSGAAPMGKELEDSVRAKLPNATLGQGYGMTEAGPVLSMCLAFAKEPMQVKSGACGTVVRNAEMKIIDPDTGASLHRNQAGEICIRGNQIMKGYLNDQEATERTIDKGGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLVAHPNISDAAVVSMKDEVAGEVPVAFVVRSNGSMISEDEIKQYISKQVVFYKRISRVFFVGSIPKAPSGKIFRKDLRAWLATDLA 546

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Match: W8QKZ8_9LAMI (4-coumarate:coenzyme A ligase 4 OS=Fraxinus mandshurica GN=4CL PE=4 SV=1)

HSP 1 Score: 891.338 bits (2302), Expect = 0.000e+0
Identity = 423/543 (77.90%), Postives = 476/543 (87.66%), Query Frame = -3

Query:  363 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVAN 1991
            ME    Q  E IFRS LPDIYIP HLPLH+YCFEN+SQF  RPCLING T ++YTYAEV L +RKVA+GLN +GIQQGD IM+LL NSPEF+FAFLGAS+RGA+ST ANPF+ PAE+ KQA AS  KL+ITQ  Y EKVK +A +N +K++ ID PPEGCL FS+LT+A+E+++PAVKIN DD VALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLY H +DV+LCVLPLFHIYSLNSVLLC LRVGAAILIMQKF+IV   EL++KYKVTI PFVPPIVLA++KSP++DKYDLSS+R VMSG AP+G+ELEDAVR +   AKLGQGYGMTEAGPVLAM LAFAKEP E KSGACGTVVRNAEMKIVD  TGASL +N+SGEICIRG QIMKGYLND EAT+ TIDKDGWLHTGDIG+ID DDELFIVDRLKE+IKYKGFQVAPAE+EA+L+ HPNISDA VVP+KDE AGEVPVAFVV+SNGS ITED+IKQF+SKQV+FYKR+ RVFF DAIPKSPSGKILRKDLRARLAA V N
Sbjct:    1 METKAMQE-ETIFRSKLPDIYIPKHLPLHSYCFENISQFSSRPCLINGDTDEVYTYAEVELISRKVASGLNKIGIQQGDTIMILLPNSPEFVFAFLGASYRGALSTMANPFFKPAEVVKQAKASNAKLIITQGCYVEKVKEYALENSVKVMCIDEPPEGCLLFSDLTKADENDMPAVKINPDDAVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFDIVPFFELIQKYKVTIGPFVPPIVLAIAKSPLVDKYDLSSVRTVMSGAAPLGRELEDAVRSKFSKAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGACGTVVRNAEMKIVDTETGASLGRNESGEICIRGDQIMKGYLNDPEATERTIDKDGWLHTGDIGFIDADDELFIVDRLKEIIKYKGFQVAPAEIEALLLNHPNISDAAVVPLKDEEAGEVPVAFVVKSNGSNITEDEIKQFVSKQVIFYKRVNRVFFIDAIPKSPSGKILRKDLRARLAAGVPN 542

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Match: J7FW91_COFAR (4-hydroxycinnamoyl-CoA ligase 3 OS=Coffea arabica GN=4CL3 PE=2 SV=1)

HSP 1 Score: 889.026 bits (2296), Expect = 0.000e+0
Identity = 437/542 (80.63%), Postives = 485/542 (89.48%), Query Frame = -3

Query:  366 MEADQHQHVEFIFRSTLPDIYIPNHLPLHTYCFENVSQFKDRPCLINGPTGKIYTYAEVHLTARKVATGLNNLGIQQGDVIMLLLQNSPEFIFAFLGASFRGAISTTANPFYTPAEIAKQATASKTKLLITQAVYAEKVKSFAKDNDIKIVTIDAPPEGCLHFSELTEANEDEIPAVKINSDDVVALPYSSGTTGLPKGVMLTHKSLVTSIAQQVDGENPNLYFHEKDVILCVLPLFHIYSLNSVLLCSLRVGAAILIMQKFEIVTLMELVEKYKVTIAPFVPPIVLAVSKSPVIDKYDLSSIRMVMSGGAPMGKELEDAVRDRLPNAKLGQGYGMTEAGPVLAMNLAFAKEPRETKSGACGTVVRNAEMKIVDPYTGASLPQNQSGEICIRGTQIMKGYLNDTEATKVTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDATVVPMKDEAAGEVPVAFVVRSNGSKITEDDIKQFISKQVVFYKRLGRVFFTDAIPKSPSGKILRKDLRARLAADVA 1991
            ME  Q Q  EF+FRS LPDIYIPNHLPLH+YCFEN+ +F +RPCLING TG IYTYA+V L ARKVA GL+ +GIQQG+VIMLLLQNSPEF FA LGAS+RGA+STTANPFY PAEI KQA ASK KL+ITQ+ Y EKV  FAK+N++K++  DAPPEGCLHFSEL+ A+E  IPAVKIN +D VALPYSSGTTGLPKGVMLTHK LVTS+AQQVDGENPNLYFH++DVILCVLPLFHIYSLNSVLLC LRVGAAILIMQKFEI  LMELV+KYKVTIAPFVPPIVL ++KSPV+DKYDLSSIRMVMSG APMGKELED VR +LP A LGQGYGMTEAGP+L+M LAFAKEP + KSGACGTVVRNAEMKIVDP T  SLP+NQ+GEICIRG QIMKGYLND EAT+ TIDK+GWLHTGDIGYIDDDDE+FIVDRLKELIKYKGFQVAPAELEAML++HP ISDA VV MKDEAAGEVPVAFVVR++GSKI+ED+IKQFIS QV+FYKR+ RVFF D IPK+PSGKILRKDLRA+LAA+VA
Sbjct:    1 METKQDQQ-EFVFRSKLPDIYIPNHLPLHSYCFENIPEFCNRPCLINGTTGDIYTYADVELIARKVAAGLDKIGIQQGEVIMLLLQNSPEFAFALLGASYRGAMSTTANPFYKPAEIEKQARASKAKLIITQSCYVEKVMDFAKENNVKVMCTDAPPEGCLHFSELSSADEKVIPAVKINPNDAVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHKEDVILCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFEINALMELVQKYKVTIAPFVPPIVLEIAKSPVVDKYDLSSIRMVMSGAAPMGKELEDTVRAKLPKAVLGQGYGMTEAGPLLSMCLAFAKEPFDVKSGACGTVVRNAEMKIVDPETNLSLPRNQAGEICIRGDQIMKGYLNDPEATENTIDKEGWLHTGDIGYIDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLLSHPGISDAAVVSMKDEAAGEVPVAFVVRASGSKISEDEIKQFISNQVIFYKRIHRVFFMDKIPKAPSGKILRKDLRAKLAAEVA 541

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
4CL1_TOBAC	0.000e+0	76.48	4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=...	[more]
4CL2_TOBAC	0.000e+0	77.53	4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=...	[more]
4CL1_SOLTU	0.000e+0	75.69	4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=...	[more]
4CL2_SOLTU	0.000e+0	75.51	4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=...	[more]
4CL1_PETCR	0.000e+0	76.23	4-coumarate--CoA ligase 1 OS=Petroselinum crispum ...	[more]
4CL2_PETCR	0.000e+0	75.85	4-coumarate--CoA ligase 1 OS=Petroselinum crispum ...	[more]
4CL2_ARATH	0.000e+0	71.30	4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana ...	[more]
4CL_VANPL	0.000e+0	74.95	4-coumarate--CoA ligase OS=Vanilla planifolia GN=4...	[more]
4CL_PINTA	0.000e+0	69.29	4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2...	[more]
4CL1_ARATH	0.000e+0	70.42	4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana ...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0094087 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
W8QHM4_9LAMI	0.000e+0	77.90	4-coumarate:coenzyme A ligase 4 OS=Fraxinus mandsh...	[more]
D5LNB5_SORAU	0.000e+0	79.04	p-coumarate:CoA-ligase 2 OS=Sorbus aucuparia PE=2 ...	[more]
I1MSS0_SOYBN	0.000e+0	78.32	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
W8QKZ8_9LAMI	0.000e+0	77.90	4-coumarate:coenzyme A ligase 4 OS=Fraxinus mandsh...	[more]
J7FW91_COFAR	0.000e+0	80.63	4-hydroxycinnamoyl-CoA ligase 3 OS=Coffea arabica ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 34..443 e-value: 2.1E-112 score: 375.7
None	No IPR available	GENE3D	2.30.38.10		coord: 359..434 e-value: 4.7E-28 score: 96.4
None	No IPR available	GENE3D	3.30.300.30		coord: 440..537 e-value: 6.9E-31 score: 106.3
None	No IPR available	GENE3D	3.40.50.980		coord: 193..348 e-value: 5.9E-49 score: 165.4
None	No IPR available	GENE3D	3.40.50.980		coord: 29..192 e-value: 3.6E-37 score: 126.9
None	No IPR available	PANTHER	PTHR24096:SF149	4-COUMARATE--COA LIGASE 1-RELATED	coord: 2..536
None	No IPR available	PANTHER	PTHR24096	FAMILY NOT NAMED	coord: 2..536
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 7..539
IPR025110	AMP-binding enzyme C-terminal domain	PFAM	PF13193	AMP-binding_C	coord: 452..527 e-value: 2.2E-14 score: 54.0
IPR020845	AMP-binding, conserved site	PROSITE	PS00455	AMP_BINDING	coord: 187..198

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0094087 ID=g.barbadense_cottongen_reftransV1_0094087; Name=g.barbadense_cottongen_reftransV1_0094087; organism=Gossypium barbadense; type=contig; length=2326bp
AGGGAATAAAACTATAGAAAACAAATATATAAAGCACAACAAATGTTTGA
GTTTCAACTTTGTCAAACAATGAAACACATGTTGTACAACACTGGTTTTT
TTTTTCGAGTTTGTTCACAAAATCATACAAATTTTACATTAAAAGCCCAA
ATGCTGTTACATTTTTCTCTGATCCTCCATTCTTGGTTCCCCAAAAGTGA
GAAATTCAATTCTTTGGCATTAAAAGATCTCCAGCGCCCAACACATTTTG
TTCCCAGGTTGATGGAGGAAAAAGAGAAAAAAAAAGAACAACAAATCCAC
ATCTGTATTGATAGCATTTTCTAGATGGTATGTATGCGACGATACATGTT
CCGTTTAAGCTAGTTGGCTACATCTGCAGCGAGCCTTGCTCTTAGATCTT
TCCGCAATATCTTACCTGAAGGAGATTTAGGGATTGCATCCGTGAAGAAA
ACCCGGCCAAGCCTCTTGTAAAACACAACCTGTTTTGAGATGAATTGCTT
AATGTCATCCTCAGTGATCTTAGAACCATTGGATCTCACAACGAAAGCAA
CTGGAACCTCTCCAGCAGCTTCATCTTTCATAGGTACAACAGTAGCATCG
GAGATGTTGGGATGGGCAATTAACATTGCTTCCAGCTCAGCAGGTGCGAC
TTGGAACCCTTTGTATTTGATCAGTTCCTTCAATCGATCGACAATGAAAA
GCTCATCATCGTCGTCAATGTAGCCAATGTCGCCGGTGTGCAACCATCCA
TCTTTGTCTATGGTTACCTTTGTGGCTTCCGTATCATTAAGATAACCTTT
CATAATCTGGGTGCCCCGAATGCAAATTTCCCCCGATTGGTTTTGTGGAA
GCGACGCCCCAGTGTAAGGATCCACGATCTTCATCTCCGCGTTCCGTACG
ACTGTGCCGCACGCACCGGATTTTGTCTCCCGGGGTTCCTTCGCAAAAGC
CAAGTTCATAGCCAGCACTGGCCCTGCCTCAGTCATGCCATACCCCTGTC
CTAATTTTGCATTTGGAAGCCTATCTCTAACAGCATCCTCTAGCTCCTTC
CCCATCGGTGCACCACCGGACATCACCATCCGAATAGAGGAAAGGTCATA
TTTATCAATGACCGGAGACTTAGAGACGGCCAAAACGATCGGCGGCACGA
ATGGGGCAATGGTTACCTTGTATTTCTCGACAAGCTCCATCAATGTCACG
ATCTCAAACTTCTGCATAATCAAAATTGCAGCTCCTACTCTCAAAGAACA
AAGCAACACCGAATTGAGTGAATATATGTGAAACAAAGGCAACACACAGA
GAATCACATCTTTCTCGTGGAAATAAAGATTGGGATTCTCTCCATCAACT
TGTTGAGCAATGCTCGTTACGAGACTTTTATGAGTCAACATCACTCCTTT
AGGTAATCCCGTTGTTCCCGATGAGTAAGGAAGGGCTACAACGTCGTCGG
AGTTGATTTTAACGGCCGGGATTTCGTCTTCGTTAGCTTCAGTCAATTCC
GAGAAATGTAAACAGCCTTCCGGTGGTGCATCTATCGTTACGATCTTGAT
GTCGTTGTCTTTAGCGAAACTCTTCACTTTCTCCGCATAAACTGCTTGAG
TTATAAGCAGTTTAGTCTTCGACGCCGTCGCCTGTTTCGCAATCTCTGCC
GGAGTGTAAAAGGGATTAGCGGTGGTACTGATAGCTCCACGGAACGATGC
ACCGAGGAAAGCAAAGATAAATTCCGGTGAGTTTTGAAGCAGAAGCATGA
TGACATCTCCTTGTTGGATACCCAAATTGTTGAGACCAGTAGCCACTTTA
CGAGCAGTGAGATGAACTTCGGCATAAGTATATATCTTACCAGTAGGACC
ATTGATTAAACAAGGACGATCTTTAAACTGGGAAACATTCTCAAAGCAGT
ATGTATGTAAAGGGAGGTGATTTGGGATGTAAATATCAGGGAGGGTGGAG
CGAAAGATGAACTCAACATGCTGGTGTTGATCGGCCTCCATTAATGGCGA
AATTTAGAGAAAATAACTGAAGGGTGAGAACTGCGAAAGGCAAAAGAAGA
AGGTGAGTGTTTGGTTTTGTTTTTGGCTGGTCTGGTCTGGTTGGTTTATG
GTTTGGTTGAGGGAAATAAACAAGTAGGTAATGGTAGAGGAGCCGCCCTC
ATCGCCAATTTAAAACAAAGTCCCAAATATGTATATTCATTTGGGCAACA
AGTCATATGTATTAGTTCATTGCTTTATGTATTGATTTAGACATTTGGAC
ATTGGCTATGTTGTTGAATCCTTCACCAAACCTTAATTATTGGAAATTAA
TTAACGTGTATTATGTATATTATCTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000873	AMP-dep_Synth/Lig_com
IPR025110	AMP-bd_C
IPR020845	AMP-binding_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Search form

g.barbadense_cottongen_reftransV1_0094087, g.barbadense_cottongen_reftransV1_0094087 (contig) Gossypium barbadense

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