g.barbadense_cottongen_reftransV1_0094016, g.barbadense_cottongen_reftransV1_0094016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 3.686e-103 Identity = 183/443 (41.31%), Postives = 270/443 (60.95%), Query Frame = 3 Query: 420 LDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGD---YVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 LD NV +VN +I E A F K +++WN MI G+ +N R +AL++F +M V+PD FT+ SV+T A L +HA W+H ++ ++ N +++AL+DMY+KCG I A+ +F+ V+ WNAMI+G HG A+ +F +M+ I P+ +TF+ +++ACSHSGLVE G K F +M YSIE ++HYG MVDL GRAG L EA+ I MPV+P V ++ A+L AC+I++ E A + L D +VLL+N+Y + WE VR M ++G+RK G S +E+ +H F +G +HP+++ +Y L+ LI K G++P T+LVL + + KE L+ HSEKLA+++G+L T+ G I + KNLR+C DCHN K +S + R I+VRD RFH F+ G+CSC DYW Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809 HSP 2 Score: 130.568 bits (327), Expect = 5.161e-30 Identity = 87/334 (26.05%), Postives = 150/334 (44.91%), Query Frame = 3 Query: 234 SVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSG 1235 SV + A RL S IH + G+ + ++ +LV Y +C L AR+L D G+ E +V++WN MI YV+N +EA+ F++MLD V+P + + CA LG + ++H+L E ++ N + ++LI MY KC + TA +F + WNAMI G A +G P DA+ FS+M + PD+ T++ ++TA + + K+ + + R ++ + +VD++ + G + A + + M E V W A++ Y G+ A+ ++ G Sbjct: 241 SVLPAVSALRLIS---VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--------------------GMLER-------------NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMIDG---YGTHGFGKAALELFEEMQKG 533 HSP 3 Score: 112.079 bits (279), Expect = 3.444e-24 Identity = 59/224 (26.34%), Postives = 118/224 (52.68%), Query Frame = 3 Query: 489 AKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALL 1160 A+K F + P D+++WN ++ GY +N AL + M + N++P T SV+ + L I+ +H + +S+AL+DMY+KCG ++TA+++F+G +V WN+MI+ + P +A+ +F KM E + P ++ +G L AC+ G +E GR + + +S ++ + ++ ++ + ++ A ++ + +V W A++ Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT-LVSWNAMI 410 HSP 4 Score: 100.908 bits (250), Expect = 1.357e-20 Identity = 69/280 (24.64%), Postives = 131/280 (46.79%), Query Frame = 3 Query: 369 QCDRLLLARKLLDQVFRLD------FNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPK 1190 +C L R++L VF+ F +V+L + G A + F + ++ M+ G+ + S ++AL FF M +VEP + F ++ VC + +H L+ + L+ + L +MY+KC ++ A++VF+ D+ WN ++ G + +G+ A+ + M EN+ P IT + +L A S L+ G++ + R + + +VD++ + G LE A + + M +E +VV W +++ A + PK Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY----GSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY-AMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPK 319
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 9.865e-103 Identity = 186/443 (41.99%), Postives = 268/443 (60.50%), Query Frame = 3 Query: 420 LDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRL---KSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 L+ +V + + +I+ LGE A F + GD I WN +IGG+ +NSR + AL F+ M + ++ T SV+ C L + + H + + + +L IL++AL+DMY KCG ++ A VFN DV W+ MI+GLA +G +A+ +F +M+ P+ IT +G+L ACSH+GL+E+G YF M Y I+P EHYG M+DL G+AG L++A ++ M EPD V WR LL ACR+ + L E A + L +G Y LLSN+Y + ++W+S E +R M+ +GI+K G SWIE+ IH F GD SHP+ + K L+ LI + G++P+T+ VL D+ E+ E +L HHSEKLALA+G++ + I I KNLRIC DCH + KL SKL IR I++RD IR+H F+ G CSC DYW Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630 HSP 2 Score: 103.219 bits (256), Expect = 1.497e-21 Identity = 86/340 (25.29%), Postives = 153/340 (45.00%), Query Frame = 3 Query: 147 LTLETSSAAIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 +TL S ++ LLS L Y RD L KA ++ + TY L+ + + L+ R L R + +VN++I + A + F + P +VI+W MI Y + ++AL ML NV P+ +T++SV+ C + + +H + ++ +E + + SALID+++K G + A VF+ D VWN++I G A + A+ +F +M+ + T +L AC+ L+E G + ++ +Y + + + +VD++ + G LE+A V M E DV+ W ++S Sbjct: 15 VTLRCSYSSTDQTLLLSEFTRLCYQRD------------LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRP--MMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA-HVHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISG 333 HSP 3 Score: 63.929 bits (154), Expect = 3.333e-9 Identity = 37/153 (24.18%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 408 QVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILS--SALIDMYSKCGRIQTAKEVFNGAD-HSDVSVWNAMING 857 + + D ++++ N +++ G A + F++ DVITW+ MI G +N +EAL F M S +P+ T V+ C+ G + + R M +K ++P+ +ID+ K G++ A ++ N + D W ++ Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM-KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.511e-102 Identity = 178/466 (38.20%), Postives = 282/466 (60.52%), Query Frame = 3 Query: 369 QCDRLLLARKLLD---QVFRLDF--NVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLK---SGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQ-TDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 C+R+ K L+ V R F + ++ ++ G A K F + PV D+++WN+MI + +ALS ++ M + V D +T ++++ CA + A+N + +HR+ + E +S+ALIDMY+KCG ++ A VFNG DV WN+MI G HG +AI+ F KM + P++ITF+G+L CSH GLV+EG ++F +MSS++ + P ++HYG MVDL+GRAG LE + +I A D V+WR LL +C+I++ +LGEVA+ + +L+ +GDYVL++++Y + ++ +R+L++ ++ + G SWIE+G +H+F D+ HPE+ +Y L +I + L G+ P+ ++ +S+ HSEKLA+AYG+++T+ G + I+KNLR+C DCH++ K VSK R IIVRDR+RFH F G CSC DYW Sbjct: 116 SCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581 HSP 2 Score: 94.3597 bits (233), Expect = 8.117e-19 Identity = 58/214 (27.10%), Postives = 108/214 (50.47%), Query Frame = 3 Query: 534 WNLMIGGYVRNSRFEEALSFFREMLDSNV-EPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEH----YGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALL 1160 WN +I G+ +S ++ F+ ML S+V PD FTF + C R+ +I L +H + + I++++L+ YS G ++ A +VF+ D+ WN MI + GL A++++ +M E + DS T + +L++C+H + G +M R + + + E ++D++ + G LE A V M + DV+ W +++ Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-----VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 2.428e-102 Identity = 176/420 (41.90%), Postives = 258/420 (61.43%), Query Frame = 3 Query: 489 AKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKS---GDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +++ F + D I+WN ++ GYV+N R+ EAL FR+M+ + V+P F+SV+ CA L ++ +H + N ++SAL+DMYSKCG I+ A+++F+ + D W A+I G A HG +A+++F +M+ + + P+ + F+ +LTACSH GLV+E YFN M+ Y + ++EHY + DL GRAG LEEAY I M VEP +W LLS+C +++ +L E + + S G YVL+ NMY S RW+ +R M+KKG+RK SWIE+ H F +GDRSHP + + + L +++Q + EG++ T VL D+ EE K L HSE+LA+A+GI+ T PG I ++KN+RIC DCH IK +SK+ R IIVRD RFH F G+CSC DYW Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715 HSP 2 Score: 113.235 bits (282), Expect = 1.243e-24 Identity = 76/317 (23.97%), Postives = 151/317 (47.63%), Query Frame = 3 Query: 225 DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKL-----LDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALL 1160 DH VL++C + D + ++H I +LG L L + L + K+ D++ + N ++ E + ++ F P DV+++N +I GY ++ +E+AL REM ++++PD FT +SV+ + + + +H + K I+ + + S+L+DMY+K RI+ ++ VF+ D WN+++ G +G +A+ +F +M + P ++ F ++ AC+H + G++ + R I +VD++ + G ++ A + + M V D V W A++ Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC--DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 2.700e-102 Identity = 187/467 (40.04%), Postives = 276/467 (59.10%), Query Frame = 3 Query: 348 SLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVA---IANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +++ Y+Q +R+ +A++L D + NV N +I G+ AK F K P D ++W MI GY ++ EAL F +M ++ +F+S ++ CA + A+ +H + + E + +AL+ MY KCG I+ A ++F D+ WN MI G + HG A+ F M+ E + PD T + +L+ACSH+GLV++GR+YF M+ Y + P +HY MVDL GRAGLLE+A+ +++ MP EPD IW LL A R++ +L E A I M SG YVLLSN+Y S RW +R M+ KG++K+ G SWIE+ H F GD HPE + ++ L+ L + K G++ +T +VL D+ EEEKE + +HSE+LA+AYGI++ S GR I + KNLR+C DCHN IK ++++ R+II+RD RFH F+ GSCSC DYW Sbjct: 317 AMLAGYVQGERMEMAKELFDVM--PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 94.7449 bits (234), Expect = 1.100e-18 Identity = 72/287 (25.09%), Postives = 142/287 (49.48%), Query Frame = 3 Query: 351 LVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRK-YFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAI 1208 L+ +++ +++ AR+ D + D VV N +I G+ A++ F ++PV DV TW M+ GY++N EEA RE+ D E ++ ++ +++ + + A + +M + + + +I Y++CG+I AK +F+ D W AMI G + G F+A+ +F +ME E + +F L+ C+ +E G++ + L+ Y + + ++ ++ + G +EEA + + M + D+V W +++ Y + GEVA+ Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRD--VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--ALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAG---YSRHGFGEVAL 495 HSP 3 Score: 90.8929 bits (224), Expect = 1.452e-17 Identity = 68/271 (25.09%), Postives = 135/271 (49.82%), Query Frame = 3 Query: 354 VLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 + +Y++ R A ++ ++ R ++ V N +I + GE+ A+K F + P D+++WN+MI GYVRN +A RE+ + E D ++ ++++ A+ G ++ A V M EK N + +AL+ Y + +++ A +F ++ + WN ++ G +A F M V ++ +++ I+T + SG ++E R+ F+ S + + MV + + ++EEA + + MP E + V W A+L+ Sbjct: 71 ISSYMRTGRCNEALRVFKRMPR--WSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA----RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFD-----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG 321 HSP 4 Score: 65.855 bits (159), Expect = 8.458e-10 Identity = 64/289 (22.15%), Postives = 121/289 (41.87%), Query Frame = 3 Query: 522 DVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVEN----------------------IFPDSITFIGILTACSHSGLVE-----EGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVREL 1307 D+ WN+ I Y+R R EAL F+ M ++ +++ R G A + M E+++ + + +I Y + + A+E+F DV WN M++G A +G DA +VF +M +N +F + + C G V+ E R++F+ M+ R + + ++ + ++G ++EA + + PV+ DV W A++S Y + ++ E A ++ + V + M + E E +EL Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL 334
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A0D2PYT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1) HSP 1 Score: 1045.03 bits (2701), Expect = 0.000e+0 Identity = 530/539 (98.33%), Postives = 534/539 (99.07%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAAIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 MLRNGVKKLTLETSSAAIGF SLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLV TYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPV DVITWNLMIGGYVRN+RFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMT+KEIELNPILSSALIDMYSKCGRIQTAKEVFN ADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAE VRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLI++TKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW Sbjct: 1 MLRNGVKKLTLETSSAAIGFTSLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVSTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVRDVITWNLMIGGYVRNARFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTKKEIELNPILSSALIDMYSKCGRIQTAKEVFNSADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAELVRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIRRTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW 539
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A061G6N9_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1) HSP 1 Score: 869.381 bits (2245), Expect = 0.000e+0 Identity = 437/542 (80.63%), Postives = 494/542 (91.14%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA---AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M RNGVKKL +TS+A SL +PDFLH+SRDHR+V ++LEAC+LSSDYK ASAIHA IFKLGYGTYPSLV +L+ TYLQC L+LA +L+DQVFR D N+VI+NLVIEHLM LGEYG AKK FHK PV D++TWN+MIGGYVRN+RFEEAL+FFREML SNV+PDKFTFASV+T CARLGA+NHALWVH L+TEKEIELN IL++ALIDMYSKCGRI TAKEVFN A+H+DVS+WNAMINGLA HGL F+AIAVFSKM VENI PDSITFI +LTACSHSGLVEEG+KYF+LMS YSI+PQIEHYG MVDL+GRAG LEEAYA+I+AMP+EPD+VIWRALLSAC+ Y+KP+LGEVAIAN+SRL+SGDYVLLSN+YCS+K+WESAE +RE+MKKKGIRKIRGRSWIELGG+IHRFKAGDRSHPETEGLYKVL+GLIQ+TKL+GFLP+T+LVLMDISEEEKEGNLNHHSEKLALAYGILKTSPG EIMISKNLRICHDCHNWIK+VSKLLIRVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MQRNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIHAIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEKEIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVFSKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGRAGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A061G016_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1) HSP 1 Score: 868.996 bits (2244), Expect = 0.000e+0 Identity = 437/542 (80.63%), Postives = 494/542 (91.14%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA---AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M RNGVKKL +TS+A SL +PDFLH+SRDHR+V ++LEAC+LSSDYK ASAIHA IFKLGYGTYPSLV +L+ TYLQC L+LA +L+DQVFR D N+VI+NLVIEHLM LGEYG AKK FHK PV D++TWN+MIGGYVRN+RFEEAL+FFREML SNV+PDKFTFASV+T CARLGA+NHALWVH L+TEKEIELN IL++ALIDMYSKCGRI TAKEVFN A+H+DVS+WNAMINGLA HGL F+AIAVFSKM VENI PDSITFI +LTACSHSGLVEEG+KYF+LMS YSI+PQIEHYG MVDL+GRAG LEEAYA+I+AMP+EPD+VIWRALLSAC+ Y+KP+LGEVAIAN+SRL+SGDYVLLSN+YCS+K+WESAE +RE+MKKKGIRKIRGRSWIELGG+IHRFKAGDRSHPETEGLYKVL+GLIQ+TKL+GFLP+T+LVLMDISEEEKEGNLNHHSEKLALAYGILKTSPG EIMISKNLRICHDCHNWIK+VSKLLIRVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MQRNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIHAIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEKEIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVFSKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGRAGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A5BED5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1) HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0 Identity = 355/512 (69.34%), Postives = 425/512 (83.01%), Query Frame = 3 Query: 204 DFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 D + RDH+ + +LEAC+ SSD++ A HA+I K GYGTYPSL+ SLV TY CD L LA +LLD++ F+++ NL+I LM +GE+ FAK+ F K DV+TWN MIGG VRN RFEEAL FFREML+SNVEPD FTFASV+ CARLG+ +HA VH LM EK+I+LN ILSSALID+YSKCGRI TAK+VFN H DVSVWN+MINGLA HGL DAI VFS+ME+E++ PDSITFIGILTACSH GLVE+GR+YF+LM YSI+PQ+EHYG MVDL GRAGL+EEAYA+I+AMP+EPD+VIWRALLSACR ++ P+LGEVAIA +S L SGDY+LLSNMYCS+++W+SAE VRE+MK+ G+RK RGRSW+ELGGVIH+FKAGDRSHPET +YKVL+GLI++TKLEGF+P TDLVLMD+S+EE+E NLN HSEKLALAY ILKTSPG EI +SKNLR CHDCH W+K++S+LL RVIIVRDRIRFHQFEGG CSC DYW Sbjct: 51 DMVIQERDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A067JFA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26358 PE=4 SV=1) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 354/543 (65.19%), Postives = 432/543 (79.56%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAA---IGFISLLSAPDFLHYSR-DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M R G ++L +T A GF LS P H+ DH+ +LEAC+LS D + A+ H RI + GYGT S+ ASL+ TY+ C++L LA +++ QVF ++ +NLVI+ M +GEY AKK F K P DV+TWN MIGGYVRN +FEEAL F+ ML SNVEPDKFTFASV+T CARLGA+NHA W+H LM +K IE+N ILSSALIDMYSKCGRI+TAKEVF + +DVSVWN++INGLA HGL DA+ VFSKME EN+ PDS+TF+GIL ACSH GLV+EGRKYF+LM + YSI+PQ+EHYG MVDL GRAGLL+EAYA+I AMP+EPDV++WR LLSACR ++ +LGEVA+AN+S KSGDYVLLSN+YCS RW++A+ VRE+MK++G+RK RG+SW E V+HRF+AGD+SHPETE LYK+L+GLIQ+TKLEGF+P T+LV+MD+SEEEKE NL HHSEKLALAYGILKTSPG EI I KNLRIC+DCHNWIK+VS LL RVII+RDRIRFH+FEGGSCSC DYW Sbjct: 1 MQRYGARRLAAQTPMAINKWTGFNDSLSFPPHSHHENGDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 543
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: V4TKB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1) HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0 Identity = 358/541 (66.17%), Postives = 438/541 (80.96%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA--AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M +NG+K LT ++ A + S LS P LH+ HR++ VLE+C+ + + + S H RI K G+ TYPS+VASL+ Y CD+ LA ++LD+V DFN+V +N++IE+ M +GE AKK F K P DV++WN MIGG+VRN+RF+EAL FFREML S VEPDKFTFASV+T CARLGA+NHA WVH L+ EK+IELN ILS+ALIDMYSKCG+IQ AKEVF+ +DVSVWNAMI+G+A HGL DA A+F+KME+ N+ PDSITF+G+LTACSH GLVEEG KYF+ M SRYSI+PQ+EHYG MVDL GRAG +EEAY +I +M +EPDVV+WRALLSACR +++ +LGEVAIAN+SRL GDYVLLSNMYC ++RW++AE VRE+MKKKG+RK +G+SW+EL GVIH+FKAGDRSHPE E + K+L LIQ+TK EGFLP T+LVLMD+SEEEKEGNL HHSEKLALAYGILKTSPG EI ISKNLRICHDCH+WIK++S+LL RVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MRKNGMKMLTRQSPMAIQSTSSRSSLSWPQGLHHEY-HRALCGVLESCKCNLELRVVSQTHTRIIKCGFETYPSVVASLMSAYKHCDKFGLANRILDEVSLSDFNLVTMNIIIENCMRIGECEVAKKVFCKMPDKDVVSWNSMIGGFVRNARFDEALRFFREMLSSKVEPDKFTFASVITGCARLGALNHAYWVHNLIIEKKIELNFILSAALIDMYSKCGKIQMAKEVFDTVQRNDVSVWNAMISGVAIHGLAADASAIFTKMEMFNVLPDSITFLGLLTACSHCGLVEEGCKYFDHMRSRYSIQPQLEHYGAMVDLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRLELGEVAIANISRLMGGDYVLLSNMYCYLQRWDTAENVREIMKKKGVRKSQGKSWLELAGVIHQFKAGDRSHPEAEAIDKILGSLIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGTEIRISKNLRICHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 540
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: E6NU11_JATCU (JHL07K02.11 protein OS=Jatropha curcas GN=JHL07K02.11 PE=4 SV=1) HSP 1 Score: 696.812 bits (1797), Expect = 0.000e+0 Identity = 344/511 (67.32%), Postives = 418/511 (81.80%), Query Frame = 3 Query: 207 FLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 FL DH+ +LEAC+LS D + A+ H RI + GYGT S+ ASL+ TY+ C++L LA +++ QVF ++ +NLVI+ M +GEY AKK F K P DV+TWN MIGGYVRN +FEEAL F+ ML SNVEPDKFTFASV+T CARLGA+NHA W+H LM +K IE+N ILSSALIDMYSKCGRI+TAKEVF + +DVSVWN++INGLA HGL DA+ VFSKME EN+ PDS+TF+GIL ACSH GLV+EGRKYF+LM + YSI+PQ+EHYG MVDL GRAGLL+EAYA+I AMP+EPDV++WR LLSACR ++ +LGEVA+AN+S KSGDYVLLSN+YCS RW++A+ VRE+MK++G+RK RG+SW E V+HRF+AGD+SHPETE LYK+L+GLIQ+TKLEGF+P T+LV+MD+SEEEKE NL HHSEKLALAYGILKTSPG EI I KNLRIC+DCHNWIK+VS LL RVII+RDRIRFH+FEGGSCSC DYW Sbjct: 4 FLKILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: B9I418_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s11110g PE=4 SV=2) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 345/543 (63.54%), Postives = 429/543 (79.01%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAAI----GFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M N +K+LT + I + S+ +P ++ D++ +Y +L++ + S D K S IH+RI YGT PSL+ASL+L Y+ C+ + K++DQVF ++V +NL+I+ LM Y AK F+K DV+TWN MIGGYVR +RFEEAL FR M SNVEPDK+TFASV+ CA+LGA+ HA WVH L+ EK IELN ILSSALIDMYSKCG+IQTAKE+F+G ++V +WNAMI+GLA HGL DAI VF+KMEVEN+ PD+ITF+GILTACSH GLV+EGRKYF+LM SRYS++P IEHYG MVDL GRAGLLEEA+A+I++MP+EPDVVIWRALL ACR Y+KP+LGE A+AN+SRL+SGDYVLLSN+YCS KRW++A+GV E+MKKKG+ K+RG+S E G +H FKAGDRSHPETE +YK+L+GLIQ+TKL G++P TDLV MD+SEEEKEGNL HHSEKLALAYGILKT+ G E+ ISKNLRIC+DCH+WIK+VS+LL RVIIVRDRIRFH+FE G CSC DYW Sbjct: 1 MQLNVIKRLTTQPHMGIIRWNRSYSSVPVSPPPQQHNADYQELYNLLQSGKTSMDIKTLSKIHSRIITFSYGTSPSLMASLMLKYVHCNCRSIVYKVIDQVFCWSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGACRTYKKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 543
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: I1L0Y5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0 Identity = 337/518 (65.06%), Postives = 405/518 (78.19%), Query Frame = 3 Query: 201 PDF--LHYS---RDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 P F L YS D +++VLE CR+S+D K A+ HAR+ LG+ TYPSLVASL+ TY QC R +A VF ++ +NLVIE L+ G+ AKK F K V DV+TWN MIGGYVRN RF +ALS FR ML + VEPD FTFASV+T CARLGA+ +A WVH LM EK +ELN ILS+ALIDMY+KCGRI +++VF VSVWNAMI+GLA HGL DA VFS+ME+E++ PDSITFIGILTACSH GLVEEGRKYF +M +R+ I+PQ+EHYG MVDL GRAGL+EEAYAVI+ M +EPD+VIWRALLSACRI++K +LGEVAIAN+SRL+SGD+VLLSNMYCS+ W+ AE VR +MK +G+RK RG+SW+ELG IH+F A +SHPE + +Y+VL+GLIQ+ KLEGF P TDLVLMD+SEEEKE NL HSEKLA+AY +LKTSPG +I ISKNLRIC DCHNWIK+VSK+L R IIVRDRIRFHQFEGG CSC+DYW Sbjct: 29 PSFHSLSYSFPATDPTVLHRVLERCRVSTDLKTATKTHARVVVLGFATYPSLVASLISTYAQCHRPHIAL----HVFSRILDLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLESGDFVLLSNMYCSLNNWDGAERVRRMMKTRGVRKSRGKSWVELGDGIHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: K4C855_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g068810.2 PE=4 SV=1) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 323/514 (62.84%), Postives = 401/514 (78.02%), Query Frame = 3 Query: 198 APDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +P HYS+D+ + +LEAC++S + + + HA I KLGYG YPSL++ +V+TY CDRL LAR+LL ++ F+ V NL+I M +G AK F++ P+ D++TWN +IGGYV+N +EALS FR+ML SNVEPD +TFAS++T CARLGAI+HA WVH LMTE+ IELN ILSSALIDMYSKCGRI+ A+ +F+ + ++VSVWNAMINGL HGL DAI +FS ME EN+ PDSITFIG+LTACSH GLVEEG+KYF LM S Y I+PQ+EHYG MVDL GRAGLL+EAY VI+ MP+EPD ++WR LSACRI++ ++GEVA +S L SGDYVLLSN+YCS K+W++AE VR LMK KG+RK G+SW+E+G V+H+FKAGDRSHPE E +YK L LI QTKLEGF T+LVLMDIS+EEKE NL++HSEKLALAYGILK+SPG I +SKNLR C DCH+W+K+V+KLL R IIVRDRIRFH F G CSC DYW Sbjct: 41 SPTESHYSQDYHRLLCILEACKMSPNLRTTAGAHANIIKLGYGVYPSLISLMVVTYASCDRLNLARQLLVEIPTEYFDAVSANLMISRFMKMGTVDVAKMIFNEVPLRDLVTWNSLIGGYVKNDLCKEALSVFRKMLRSNVEPDGYTFASIITACARLGAIDHAKWVHHLMTERRIELNYILSSALIDMYSKCGRIEIARGIFDSVERTNVSVWNAMINGLGIHGLALDAIEIFSLMEPENVSPDSITFIGLLTACSHCGLVEEGQKYFQLMKSLYLIQPQLEHYGTMVDLLGRAGLLDEAYTVIKEMPIEPDAIMWRTFLSACRIHKNSEMGEVASTKISHLGSGDYVLLSNIYCSTKKWDNAEKVRCLMKWKGVRKNSGKSWVEVGNVVHQFKAGDRSHPEAELIYKTLKKLIHQTKLEGFSSTTELVLMDISDEEKEENLSYHSEKLALAYGILKSSPGTHIQVSKNLRTCPDCHSWMKMVAKLLNREIIVRDRIRFHHFADGYCSCGDYW 554 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094016 ID=g.barbadense_cottongen_reftransV1_0094016; Name=g.barbadense_cottongen_reftransV1_0094016; organism=Gossypium barbadense; type=contig; length=2139bpback to top |