g.barbadense_cottongen_reftransV1_0093942, g.barbadense_cottongen_reftransV1_0093942 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.443e-79 Identity = 133/256 (51.95%), Postives = 173/256 (67.58%), Query Frame = 2 Query: 878 LQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLD--------------SIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSP-LKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLP 1600 + G R+VD FE+L +I EGTYG VY AK+ KTGEIVALKK++M+ EREGFP+T++REI IL HH +++ +KE+V D I+MV EYM+HDL L + F+ ++KC M QLL G+ Y H N VLHRD+K SNLL++N+G LK+ DFGLAR Y T+ V+TLWYR PELLLGA +Y AIDMWS+GCI AELL +P+ GK E +QL+KIF G+P+E +WPG S +P Sbjct: 17 IWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNEQEQLNKIFELCGSPDEKLWPGVSKMP 272
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cyclin-dependent kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 1.482e-79 Identity = 122/244 (50.00%), Postives = 178/244 (72.95%), Query Frame = 2 Query: 896 VDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALME-TMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVK 1624 ++ F+++ KI EGTYGVVY+AK+K TGE+VALKK++++ E EG P T++REI++L +HP+IV + +V+ N +++V E++ DLK M+ + +K + QLL+G+ + H + VLHRDLK NLL+N +G +K+ DFGLAR +G P++ YTH VVTLWYRAPE+LLG + YSTA+D+WSLGCI AE++++ LF G +E DQL +IFRTLGTP+E +WPG + +P K +F K Sbjct: 1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 1.714e-79 Identity = 133/256 (51.95%), Postives = 175/256 (68.36%), Query Frame = 2 Query: 878 LQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLD--------------SIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSP-LKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLP 1600 + G R+VD FE+L +I EGTYG VY AK+ KTGEIVALKK++M+ EREGFP+T++REI IL HH +++ +KE+V D I+MV EYM+HDL L + F+ ++KC M QLL G+ Y H N VLHRD+K SNLL++N+G LK+ DFGLAR Y T+ V+TLWYR PELLLGA +Y AIDMWS+GCI AELL+ +P+ GKTE +QL+KI+ G+P+E+ WPG S +P Sbjct: 17 IWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLNGKPILPGKTENEQLNKIYELCGSPDESNWPGVSKMP 272
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cyclin-dependent kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2) HSP 1 Score: 264.618 bits (675), Expect = 2.058e-79 Identity = 121/244 (49.59%), Postives = 178/244 (72.95%), Query Frame = 2 Query: 896 VDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALME-TMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVK 1624 ++ F+++ KI EGTYGVVY+A++K TGE+VALKK++++ E EG P T++REI++L +HP+IV + +V+ N +++V E++ DLK M+ + +K + QLL+G+ + H + VLHRDLK NLL+N +G +K+ DFGLAR +G P++ YTH VVTLWYRAPE+LLG + YSTA+D+WSLGCI AE++++ LF G +E DQL +IFRTLGTP+E +WPG + +P K +F K Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cyclin-dependent kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 2.801e-79 Identity = 122/244 (50.00%), Postives = 177/244 (72.54%), Query Frame = 2 Query: 896 VDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALME-TMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVK 1624 ++ F+++ KI EGTYGVVY+AK+K TGE+VALKK++++ E EG P T++REI++L +HP+IV + +V+ N +++V E++ DLK M+ + +K + QLL+G+ + H + VLHRDLK NLL+N G +K+ DFGLAR +G P++ YTH VVTLWYRAPE+LLG + YSTA+D+WSLGCI AE++++ LF G +E DQL +IFRTLGTP+E +WPG + +P K +F K Sbjct: 1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Match: A0A067GQT1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004049mg PE=4 SV=1) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 380/550 (69.09%), Postives = 431/550 (78.36%), Query Frame = 2 Query: 89 MENGALSPVGRKRKFSPIVWDRSDKDVSMSKSKNSXXXXXXXXXXXRPKAYHKSPNSISGKAVQTSFVIENKSQKPHSPSPV---VFDGPVGYSALQSPEDLDFSPPKEHV-NFQDARHLEDEDYVLARHISSSRWAAGDNSXXXXXXXXXXXXXXXXXXXXXXXELSHHRLRKMSATPELGELKREGSEGIRARSSESDEQGARSKSGSGDDYPGNDSENDDLMVIDIKRDRNDGSLSQSDTESENETNSRGTPEPSAPPLRSVNMLQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVKHQL---------------PALGDSGLAFWPPLVT 1681 +ENG SP+ RKRKFSPIVWDR D D+ S+ V T + PP PKAY KSP + V S + + + S SP+ V V Y+A +SP L SPP+E N Q+ H++DEDY R+ISSSRWAAG++SP DEGEI EDEE+PKRRKK+P+ + R R +PEL E+KR GSE R+RSSESDE+G R++S SGD+Y G++SE D M ID + ND S+ SDT+SE+E +S GTPEP+ PP RS+NMLQGCR+VDEFERLNKIDEGTYGVVYRA+DKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLK LMETM+QPFSQSEVKCLMLQLLEG+KYLHDNWVLHRDLKTSNLLLNN+GELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLG++QYSTAIDMWSLGCIMAELLSKEPLFNGK+EFDQLDKIF+TLGTPNE IWPGFS LPGVKVNF+KHQ P L D+G L+T Sbjct: 144 VENGNQSPLERKRKFSPIVWDRDDSDMGKSR----LVATALPPPPSLPKAYWKSPTVVPEGGVCISPIKSSLNNNLQSVSPLIPPVAARSVEYAAPESPVGLASSPPREQWHNEQEVEHVDDEDYAPTRNISSSRWAAGNSSPADEGEISEDEELPKRRKKMPVSDSLQTRARNKFLSPELSEVKRIGSERSRSRSSESDERGDRARSLSGDEYHGHESEKGDYMEIDEDHNNND-SVGGSDTDSEDENDSCGTPEPAGPPQRSINMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLT 688 HSP 2 Score: 179.874 bits (455), Expect = 6.943e-44 Identity = 83/96 (86.46%), Postives = 90/96 (93.75%), Query Frame = 3 Query: 1725 YFPFRYNLLRKKFPATSFTGTPVLSDAGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKTKAFMPTFPAQHAQDRRMRRMLKSPDPLEEQCRK 2012 + +YNLLRKKFPATSFTG+PVLSDAGFDLLN LLTYDP+KRITAEAALNH+WFREVPLPK+K FMPTFPAQHAQDRRMRRM+KSPDPLEEQ RK Sbjct: 652 FIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPAQHAQDRRMRRMMKSPDPLEEQRRK 747
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Match: M1B124_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013313 PE=4 SV=1) HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0 Identity = 364/548 (66.42%), Postives = 420/548 (76.64%), Query Frame = 2 Query: 95 NGALSPV-GRKRKFSPIVWDRSDKDVS-MSKSKNSXXXXXXXXXXXRPKAYHKSPNSISGKAVQTSFVIENKSQKPHSPSPVVFDGPVGY---SALQSPEDLDFSPP--KEHVNFQDARHLEDEDYVLARHISSSRWAAGDNSXXXXXXXXXXXXXXXXXXXXXXXELSHHRLRKMSATPELGELKREGSEGIRARSSESDEQGARSKSGSGDDYPGNDSENDDLMVIDIKRDRN-DGSLSQSDTESENETNSRGTPEPSAPPLRSVNMLQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVKHQLPALGDSGLAFWPPLVTVQ*HCIYFCLY 1714 NG S V +KRKFSPI+WDR DK+V+ MSKS+NSP + PPP PK+ + N + Q S + N PSP + +G ++ +SP D+ SPP +E + Q+ R +EDE+YV I SSRWA D + + ++ P +K+ + + + R+ S TPE ELKRE S G R RSS+SDE +S S + Y GN+ + +D M D+ +DRN DG+ SDTESE+E +SRGTPE PP RSVNMLQGCR+VDEFERLN+IDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLS HHPSIVDVKEVVV S+LDSIFMVMEYMEHDLKALMETM++PF+QSEVKCLMLQLL GVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGA+QYSTAIDMWSLGCIMAE+L KEPLFNGK+E DQ+DKIFR LGTPNETIWPGFS LPGVKVNFVKHQLPALGDSGLAFWPPL+T+ ++ C Y Sbjct: 203 NGNQSSVQSKKRKFSPIIWDREDKEVNRMSKSRNSPAAAKLPPPPPLPKSSGQLANFPPERVEQVSLLNTNNVHS-MEPSPSNTNTALGLLMDASHESPVDI-CSPPVDEEQLPSQETRKVEDEEYVPVPTIRSSRWAT-DADSPADEGEISGDDTPLLKKRRAVSQSAEMGGRRKSLTPEYEELKRESSGGNRTRSSDSDEH---IRSCSRESYQGNELDKNDSM--DVDKDRNYDGTSVSSDTESEDEHDSRGTPEAVLPPQRSVNMLQGCRSVDEFERLNRIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSLHHPSIVDVKEVVVRSSLDSIFMVMEYMEHDLKALMETMKKPFTQSEVKCLMLQLLHGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAEMLCKEPLFNGKSEVDQIDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQLPALGDSGLAFWPPLMTIYGGEVFSCFY 742
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Match: K4BYJ5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g014760.2 PE=4 SV=1) HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0 Identity = 358/531 (67.42%), Postives = 413/531 (77.78%), Query Frame = 2 Query: 95 NGALSPV-GRKRKFSPIVWDRSDKDVS-MSKSKNSXXXXXXXXXXXRPKAYHKSPNSISGKAVQTSFVIENKSQKPHSPSPVVFDGPVGY---SALQSPEDLDFSPP--KEHVNFQDARHLEDEDYVLARHISSSRWAAGDNSXXXXXXXXXXXXXXXXXXXXXXXELSHHRLRKMSATPELGELKREGSEGIRARSSESDEQGARSKSGSGDDYPGNDSENDDLMVIDIKRDRNDGSLSQSDTESENETNSRGTPEPSAPPLRSVNMLQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVKHQLPALGDSGLAFW 1666 NG S V +KRK+SPI+WDR DK+V+ MSKS+NSPV + PPP PK+ + N S + Q S + N PSP + +G ++ +SP D+ SPP ++ + Q+AR +EDE+YV I SSRWA D + + +++ +K+ + L+ R+ S TPE ELKRE S G R RSS+SDE +S S + Y GN+ + + M +D R+ + S+SQSDTESE+E +SRGTPE + PP RSVNMLQGCR+VDEFERLN+IDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLS HHPSIVDVKEVVVGS+LDSIFMVMEYMEHDLKALMETM++PF+QSEVKCLMLQLL GVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGA+QYSTAIDMWSLGCIMAE+L KEPLFNGKTE DQ+DKIFR LGTPNE IWPGFS LPGVKVNFVKHQLPALGDSGLAFW Sbjct: 178 NGNQSSVQSKKRKYSPIIWDREDKEVNRMSKSRNSPVAAKLPPPPPLPKSSGQLANFPSERVEQVSLLNTNNVHIIE-PSPSNTNTALGLLMDASHESPVDI-CSPPVDEKQLPSQEARKVEDEEYVPVPTIRSSRWAT-DADSPADEGEISGDDMLLLKKRRAVPHLAEIGGRRKSLTPEYEELKRESSGGNRTRSSDSDEH---IRSCSRESYQGNELDKNGPMDVDKDRNYDGASVSQSDTESEDEHDSRGTPEAALPPQRSVNMLQGCRSVDEFERLNRIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSLHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKALMETMKKPFTQSEVKCLMLQLLHGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAEMLCKEPLFNGKTEVDQIDKIFRILGTPNEMIWPGFSKLPGVKVNFVKHQLPALGDSGLAFW 702 HSP 2 Score: 152.14 bits (383), Expect = 0.000e+0 Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 1728 FPFRYNLLRKKF--PATSFTGTPVLSDAGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKTKAFMPTFPAQHAQDRRMRRMLKSPDPLEEQCRK 2012 F +N LR KF P TS+ G P LS++G DLLNKLLTYDP KRI+A+AALNHEWFREVPLPK+K FMPTFPAQHAQDRR+RR++KSPDPLEEQ RK Sbjct: 699 LAFWFNNLRNKFQSPTTSYMGKPDLSESGLDLLNKLLTYDPAKRISADAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRVMKSPDPLEEQRRK 795
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Match: A0A059D829_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03465 PE=4 SV=1) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 393/571 (68.83%), Postives = 435/571 (76.18%), Query Frame = 2 Query: 38 DAIXXXXXXXXXXXXXXMENGALSPV-GRKRKFSPIVWDRSDKDVS-MSKSKNSXXXXXXXXXXXRPKAYHKSPNSISGKAVQTSFVIENKSQKPHSPSPVVFDGPV-GYSALQSP--EDLDFSPPKEH---VNFQDARHLEDEDYVLARHISSSRWAAGDNSXXXXXXXXXXXXXXXXXXXXXXXELSHHRLRKMSATPELGELKREGSEGIRARSSESDEQGARSKSGSGDDYPGNDSENDDLMVIDIKRDRNDGSLSQSDTESENETNSRGTPEPSAPPLRSVNMLQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVKHQ---------------LPALGDSGLAFWPPLVT 1681 DAIES++ VK EV K ENGA SPV RKRKFSPI+WDR D + S SK + S VT + PPP PK+Y + PN+ +G VQ S V + Q+P S S + + + G S +SP E F+ P +A LEDEDYV +ISSSRWAAGDNSP DEGEI+EDE+ P RRKK PLLE S R R S +PELG+LK++ S+ +R RSSE D +G + S S + Y + D M +D K D SDT SE++ +SRGTPEP PP RSVNMLQGCR+VDEFERLNKIDEGTYGVVYRA+DKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLK LMETM+QPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+GELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGA+QYSTAIDMWSLGCIMAE+LSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFS LPGVKVNFVKHQ LP L DSG L+T Sbjct: 119 DAIESDTGVKGIEVSKTAENGAHSPVVERKRKFSPIIWDRDDDESSKASKRRASAAVTALPPPPPLPKSYREIPNTYNG-VVQISSVKNDLGQEPQSSSLITENVDLSGDSGAESPIAESSAFALPSNDDPWAKDHEATQLEDEDYVPMHNISSSRWAAGDNSPVDEGEIVEDEDFPTRRKKTPLLESSGIRGRGKSVSPELGKLKKDSSDRLRRRSSEPDGRGGAAGSSSDNRY-----SDHDYMDVDEKNRNEDVINDTSDTNSESDDDSRGTPEPVGPPQRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAEMLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPPTSFTGLPVLSDSGFDLLNKLLT 683 HSP 2 Score: 178.333 bits (451), Expect = 1.987e-43 Identity = 83/96 (86.46%), Postives = 89/96 (92.71%), Query Frame = 3 Query: 1725 YFPFRYNLLRKKFPATSFTGTPVLSDAGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKTKAFMPTFPAQHAQDRRMRRMLKSPDPLEEQCRK 2012 + +YNLLRKKFP TSFTG PVLSD+GFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPK+K FMPTFPAQHAQDRR+RR+LKSPDPLEEQ RK Sbjct: 647 FVKHQYNLLRKKFPPTSFTGLPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKDFMPTFPAQHAQDRRLRRVLKSPDPLEEQRRK 742
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Match: A0A059D8H2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03465 PE=4 SV=1) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 395/575 (68.70%), Postives = 438/575 (76.17%), Query Frame = 2 Query: 38 DAIXXXXXXXXXXXXXXMENGALSPV-GRKRKFSPIVWDRSDKDVS-MSKSKNSXXXXXXXXXXXRPKAYHKSPNSISGKAVQTSFVIENKSQKPHSPSPVVFDGPV-GYSALQSP--EDLDFSPP-------KEHVNFQDARHLEDEDYVLARHISSSRWAAGDNSXXXXXXXXXXXXXXXXXXXXXXXELSHHRLRKMSATPELGELKREGSEGIRARSSESDEQGARSKSGSGDDYPGNDSENDDLMVIDIKRDRNDGSLSQSDTESENETNSRGTPEPSAPPLRSVNMLQGCRNVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKALMETMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSMLPGVKVNFVKHQ---------------LPALGDSGLAFWPPLVT 1681 DAIES++ VK EV K ENGA SPV RKRKFSPI+WDR D + S SK + S VT + PPP PK+Y + PN+ +G VQ S V + Q+P S S + + + G S +SP E F+ P K+H +A LEDEDYV +ISSSRWAAGDNSP DEGEI+EDE+ P RRKK PLLE S R R S +PELG+LK++ S+ +R RSSE D +G + S S + Y + D M +D K D SDT SE++ +SRGTPEP PP RSVNMLQGCR+VDEFERLNKIDEGTYGVVYRA+DKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLK LMETM+QPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN+GELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGA+QYSTAIDMWSLGCIMAE+LSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFS LPGVKVNFVKHQ LP L DSG L+T Sbjct: 119 DAIESDTGVKGIEVSKTAENGAHSPVVERKRKFSPIIWDRDDDESSKASKRRASAAVTALPPPPPLPKSYREIPNTYNG-VVQISSVKNDLGQEPQSSSLITENVDLSGDSGAESPIAESSAFALPSNDDPWAKDH----EATQLEDEDYVPMHNISSSRWAAGDNSPVDEGEIVEDEDFPTRRKKTPLLESSGIRGRGKSVSPELGKLKKDSSDRLRRRSSEPDGRGGAAGSSSDNRY-----SDHDYMDVDEKNRNEDVINDTSDTNSESDDDSRGTPEPVGPPQRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAEMLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPPTSFTGLPVLSDSGFDLLNKLLT 683 HSP 2 Score: 173.711 bits (439), Expect = 7.203e-42 Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 3 Query: 1725 YFPFRYNLLRKKFPATSFTGTPVLSDAGFDLLNKLLTYDPEK-RITAEAALNHEWFREVPLPKTKAFMPTFPAQHAQDRRMRRMLKSPDPLEEQCRK 2012 + +YNLLRKKFP TSFTG PVLSD+GFDLLNKLLTYDPEK RITAEAALNHEWFREVPLPK+K FMPTFPAQHAQDRR+RR+LKSPDPLEEQ RK Sbjct: 647 FVKHQYNLLRKKFPPTSFTGLPVLSDSGFDLLNKLLTYDPEKQRITAEAALNHEWFREVPLPKSKDFMPTFPAQHAQDRRLRRVLKSPDPLEEQRRK 743 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0093942 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093942 ID=g.barbadense_cottongen_reftransV1_0093942; Name=g.barbadense_cottongen_reftransV1_0093942; organism=Gossypium barbadense; type=contig; length=2512bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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