g.barbadense_cottongen_reftransV1_0093636, g.barbadense_cottongen_reftransV1_0093636 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: AVT1_YEAST (Vacuolar amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AVT1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.532e-30 Identity = 111/345 (32.17%), Postives = 167/345 (48.41%), Query Frame = 2 Query: 785 QTVFNAINVMVGVGLLSTPHTIAQGGWA-SFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGG--VGFHHTGK-AVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP-----PQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHVVDSLWCFFLLRA---LLVFST--VGVAFVM-----PFFGKVWYLL 1762 QT+FN+INV++G+GLL+ P + GW +L FA+ TA L+ C ++ +ISY D+G AAFG GR +S + +L V +I+ GD+L LFP S F + S F IVT V +P L +I L+ LS G V LVI C LY ++ G V T ++ + + IG+ C GH+VFPN+ M +FK ++ + + V G A +G+L FG +IT N+ P+ + I+ T+I P+ K L P+ ++ L+ +D RA L VF+ + V FV+ P F K+ L Sbjct: 212 QTIFNSINVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGYAAFGTKGRALISALFTLDLLGSGVSLVILFGDSLNALFPQYSTT--FFKIVS---FFIVTPPVFIPLSVLSNISLLGILSTTGTV--LVICCCGLYKSSSPGSLVNPMETSMWPIDLKHLCLSIGLLSACWGGHAVFPNLKTDMRHPDKFKDCLKTTYKITSVTDIGTAVIGFLMFGNLVKDEITKNVLLTEGYPKFVYGLISALMTII-PIAKTPLNARPIVSVLDVLMNVQHIDEAASAIKRRAAKGLQVFNRIFINVVFVLIAINFPEFDKIIAFL 548
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_XENLA (Vesicular inhibitory amino acid transporter OS=Xenopus laevis GN=slc32a1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.757e-16 Identity = 68/261 (26.05%), Postives = 119/261 (45.59%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVI-VLCLLY-LGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G SY D+ A F + G V++ EL C+ ++++ G+ + FP + + S ++I+ V+LP +LK+++ +S S VA VI +L + Y L A + ++ P+ IG+ F ++ P++ +M +F M +L G A + YL + T IT N+P Sbjct: 116 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGETVRVRDSYVDIANACCAPRFPKLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPNLPI--------SQKSWSIMATAVLLPCAFLKNLKAVSKFSLLCTVAHFVINILVIAYCLSRARDWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQSPREFHCMMNWTHIAACILKGLFALVAYLTWADETKEVITDNLP 368
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_HUMAN (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 4.010e-16 Identity = 70/264 (26.52%), Postives = 119/264 (45.08%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLS-----AGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G + SY + A F G V++ EL C+ ++++ G+ + FPG+ + S ++I+ V+LP +LK+++ +S S A V+ LVI C L A + ++ P+ IG+ F ++ P++ +M S+F M VL G A + YL + T IT N+P Sbjct: 123 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPV--------SQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYC---LSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLP 375
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_RAT (Vesicular inhibitory amino acid transporter OS=Rattus norvegicus GN=Slc32a1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.829e-16 Identity = 70/264 (26.52%), Postives = 119/264 (45.08%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLS-----AGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G + SY + A F G V++ EL C+ ++++ G+ + FPG+ + S ++I+ V+LP +LK+++ +S S A V+ LVI C L A + ++ P+ IG+ F ++ P++ +M S+F M VL G A + YL + T IT N+P Sbjct: 123 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPV--------SQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYC---LSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLP 375
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_XENTR (Vesicular inhibitory amino acid transporter OS=Xenopus tropicalis GN=slc32a1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.883e-16 Identity = 67/264 (25.38%), Postives = 118/264 (44.70%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLS-----AGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G SY D+ A F + G V++ EL C+ ++++ G+ + FP + + S ++I+ ++LP +LK+++ +S S A V+ LVI C L A + ++ P+ IG+ F ++ P++ +M +F M +L G A + YL + T IT N+P Sbjct: 116 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGETVRVRDSYVDIANACCAPRFPKLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPSLPI--------SQKSWSIIATAMLLPCAFLKNLKAVSKFSLLCTLAHFVINVLVIAYC---LSRARDWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQSPKEFHCMMNWTHIAACILKGLFALVAYLTWADETKEVITDNLP 368
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_MOUSE (Vesicular inhibitory amino acid transporter OS=Mus musculus GN=Slc32a1 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 6.141e-16 Identity = 70/264 (26.52%), Postives = 119/264 (45.08%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLS-----AGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G + SY + A F G V++ EL C+ ++++ G+ + FPG+ + S ++I+ V+LP +LK+++ +S S A V+ LVI C L A + ++ P+ IG+ F ++ P++ +M S+F M VL G A + YL + T IT N+P Sbjct: 123 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPV--------SQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYC---LSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLP 375
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: VIAAT_MACFA (Vesicular inhibitory amino acid transporter OS=Macaca fascicularis GN=SLC32A1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.195e-16 Identity = 70/264 (26.52%), Postives = 119/264 (45.08%), Query Frame = 2 Query: 794 FNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF--ESREGII-----SYPDMGEAA----FGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLS-----AGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMP 1537 +N N + G+ +L P+ I GG+ ++IF AVVCCYT ++ C E+ +G + SY + A F G V++ EL C+ ++++ G+ + FPG+ + S ++I+ V+LP +LK+++ +S S A V+ LVI C L A + ++ P+ IG+ F ++ P++ +M S+F M VL G A + YL + T IT N+P Sbjct: 123 WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPV--------SQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYC---LSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLKGLFALVAYLTWADETKEVITDNLP 375
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: UNC47_CAEEL (Vesicular GABA transporter OS=Caenorhabditis elegans GN=unc-47 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.954e-15 Identity = 67/285 (23.51%), Postives = 128/285 (44.91%), Query Frame = 2 Query: 776 SVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCF-----ESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGV-SLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVI--VLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYAL 1606 S Q +N N + G+ ++ P + GGW S ++ A VC +T +L+ C + R+ D + FG++ V TEL S C+ ++++ D L FP V W ++T+ +L +L D++++S LS ++ L++ ++ L L F ++N + +P ++G+ F ++ H PN+ +M + +QF ++ V +G+L FG+ T +I+ ++P Q+ + L V+ L Y L Sbjct: 90 SALQAAWNVTNAIQGMFIVGLPIAVKVGGWWSIGAMVGVAYVCYWTGVLLIECLYENGVKKRKTYREIADFYKPGFGKW----VLAAQLTELLSTCIIYLVLAADLLQSCFPSVDKAGW-----------MMITSASLLTCSFLDDLQIVSRLSFFNAISHLIVNLIMVLYCLSFVSQWSFSTITFSLNINTLPTIVGMVVFGYTSHIFLPNLEGNMKNPAQFNVMLKWSHIAAAVFKVVFGMLGFLTFGELTQEEISNSLPNQSFKILVNL-ILVVKALLSYPL 358
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: ANTL1_ARATH (Amino acid transporter ANTL1 OS=Arabidopsis thaliana GN=At2g42005 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.419e-11 Identity = 93/354 (26.27%), Postives = 143/354 (40.40%), Query Frame = 2 Query: 785 QTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESRE----GIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRL--------------FPGVSLD-------WPF-LNLDS---------MHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFF 1741 +T N +VG G+L P+ + GW L L F+V +M R+ I S+ D+G AA G GR V I++ +CV ++I G+ L L GVS +PF L L+S + +FA V L + V ++DI+ I+ + VVA GG+ G V VY F G V P + DK +F K + + V+YG +GY+ FG T+ IT N+ +VS + IN + L++ P + E++ ++C + LR LLV + VA ++P F Sbjct: 27 KTFANVFIAIVGAGVLGLPYAFKRTGWLMGL-LTLFSVAALINHCMMLLVHIRRKLGVSNIGSFGDLGFAACGNLGRFVVDILIILSQAGFCVGYLIFIGNTLANLSKPTKSTTLMSLRHLMGVSPKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADVVDLGAMAVVIVEDIK-ITVVQRPQVVAF-------------GGMSVFFYGMGV---------AVYAFEGVGM-VLP-LESETKDKDKFGKVLALSMLFIAVMYGSFGVLGYMAFGDDTMDIITANLGA-GVVSSLVQLGLCINLFFTFPLMMNP----VFEIVERRFWSGMYCVW-LRWLLVLAVTLVALLVPNF 348
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Match: S36A4_XENLA (Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.982e-10 Identity = 81/346 (23.41%), Postives = 141/346 (40.75%), Query Frame = 2 Query: 770 GCSVTQTVFNAINVMVGVGLLSTPHTIAQGG-WASFLVLIFFAVVCCY-TAILMK----YCFESREGIISYPD-------MGEAAFGR---FGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFP---GVSLDWPFLNLDSMHLFAIVTALV--VLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHT-GKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHV--VDSLWCFFLLRALLVFSTVGVAFVMP 1735 G + QT+ + + +G GLL P + G + L+FF ++ + IL++ C ++ + Y D +G R FGR V L +C + + +N+ ++F L + + S+ L + + + ++P V+++D++ +S LS V+ + I L ++Y + T +W P+ G F G V + M DK F KA+ I + LY +A +GY FG ITLN+P + + ++ YA+ A I + V L C F +R LV T VA ++P Sbjct: 86 GLTFFQTLIHLLKGNIGTGLLGLPLAMKNAGVLLGPISLLFFGIISIHCMNILVRCSHFLCQRYKKANLGYSDTVGLALEVGPGVLQRHASFGRNLVDWFLVVTQLGFCSVYFVFLAENIKQVFEVFLETKLQQSEIGIWSLDLRIYMFSFLPLIIPLVFIRDLKNLSLLSFFANVS-MAISLLIVYQYVIRNLSDPRTLPLGTSWKTYPLFFGTAIFAFEGIGVVLPLENRMRDKKDFSKALNIGMAIVTTLYISLATLGYFCFGDQIKGSITLNLPQDSWLYQLVKILYSFGIYVTYAIQYYVPAEIILPAVTSRVQKTRKLLCEFTMRFFLVCLTCAVAVLIP 430
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Match: A0A078JQ97_BRANA (BnaCnng56610D protein OS=Brassica napus GN=BnaCnng56610D PE=4 SV=1) HSP 1 Score: 555.829 bits (1431), Expect = 2.600e-178 Identity = 281/480 (58.54%), Postives = 349/480 (72.71%), Query Frame = 2 Query: 332 ERHNEEFVLESDVDDNEDDLEESKAXXXXXXXXXXXXXXXXXXXRGGPSTTFTSQ-QWPQSFKETMDPYTITASPSFGLIGGISNFRHFSFSSQ-KSNLDLDGKLPLLPENRKSYSKEFLDSISGAQSTWSQKHSFAKQLTGEFPIA-YGCSVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFFGKVWYLL 1762 ++E +E +D+ED + SK + S ++ + D TF SQ QWPQSF+ET D YTI ASP FG + +F SF Q KSNLD++ K PLLPE E D S QS WS K SFA++L PI YGCS TQT+FNAINVM GVGLLSTP T+ + GWAS ++L+ FAV+CCYTA LMK CFE++ GII+YPD+GEAAFG++GR+ + ++LYTELYSYCVEFII+EGDNLT LFPG S+DW + +DS HLF I TALVVLPTVWLKD+R+ISYLSAGGV+AT++I + +LG GG+GFHHTG AV W+GIP IG+YGFC+SGHSV PNIYQSMADK++F KA+ F LC+ LYGGVA MGY FG++TLSQITLNMP SK+A WTTV++P TKYALL+ PLARSIEELLP+ + +++WCF LLR LV S+V AF++PFFG V L+ Sbjct: 4 NNKDKEKKIEFTFEDDEDLEDTSKYENDSDNTDQSDLGDLPGDDDNNNDDTFISQVQWPQSFRETTDSYTIAASPIFGSLLSNPSFYTPSFYRQSKSNLDVESKAPLLPERN-----EESDKASVTQSVWSHKGSFAEEL----PIGGYGCSFTQTIFNAINVMAGVGLLSTPFTVKEAGWASMVILLLFAVICCYTASLMKDCFEAKTGIITYPDIGEAAFGKYGRILICVILYTELYSYCVEFIILEGDNLTGLFPGTSIDWLGIRIDSKHLFGIFTALVVLPTVWLKDLRIISYLSAGGVIATVLIAVSTFFLGTTGGIGFHHTGPAVKWNGIPFAIGIYGFCYSGHSVIPNIYQSMADKTKFNKAVITTFILCVFLYGGVAIMGYCMFGEATLSQITLNMPKGLFFSKVAQWTTVVSPFTKYALLMNPLARSIEELLPERISENIWCFLLLRTALVASSVCSAFLIPFFGLVMALI 474
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Match: K7LIA9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 555.444 bits (1430), Expect = 3.200e-178 Identity = 277/466 (59.44%), Postives = 334/466 (71.67%), Query Frame = 2 Query: 464 RGGPSTTFTSQQWPQSFKETMDPYTITASPSFGLIGGISNFRHFSFSSQ-KSNLDLDGKLPLL--PENRKSYSKEFLDSISGAQSTWSQKHSFAKQLTGEFPIAYGCSVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLT-----------------------------------KYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFFGK 1747 R P + F+SQQWPQS+KET D YTI A+P+F + +F + SF ++ KSNLD+DGK P L PE + QSTW +K S + ++GE PI YGCS TQT+FN INV+ GVGLLSTP T+ Q GW S V++ FAV+CCYTA L++YCFESREGII+YPD+GEAAFGR+GR+ VSI+LYTELYSYCVEFI +EGDNLT LFPG SLD LDSMH+F ++TAL++LPTVWLKD+R+ISYLS GGVVAT++I++C+ +G VGFHHTG+ V W+GIP IGVYGFC +GHSVFPNIYQSMADK QF KA+ ICF LC+++YGG A+MGYL FG TLSQITLNMPP A SK+ALWTTVINPLT KYALL+ PLARS+EELLPD + S WCF LLR LV STV VAF++PFFGK Sbjct: 68 RAQPDS-FSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFDNRSKSNLDIDGKTPFLSAPEGIR-------------QSTWWEKASVERLVSGELPIGYGCSFTQTIFNGINVIAGVGLLSTPFTVNQAGWMSLAVMLLFAVMCCYTATLLRYCFESREGIITYPDVGEAAFGRYGRIAVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGFKLDSMHMFGVLTALIILPTVWLKDLRIISYLSGGGVVATILIMICVFCVGTIDSVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALIICFVLCVLIYGGTASMGYLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYPFCQNYLAYESFKICHGLIKCSNPFSLAFLNSNKYALLMNPLARSLEELLPDRISSSYWCFMLLRTTLVASTVCVAFLVPFFGK 519
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Match: M4DKC0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra016949 PE=4 SV=1) HSP 1 Score: 555.444 bits (1430), Expect = 3.926e-178 Identity = 272/430 (63.26%), Postives = 332/430 (77.21%), Query Frame = 2 Query: 482 TFTSQ-QWPQSFKETMDPYTITASPSFGLIGGISNFRHFSFSSQ-KSNLDLDGKLPLLPENRKSYSKEFLDSISGAQSTWSQKHSFAKQLTGEFPIA-YGCSVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFFGKVWYLL 1762 TF SQ QWPQSF+ET D YTI ASP FG + +F SF Q KSNLD++ K PLLPE E D S QS WS K SFA++L PI YGCS TQT+FNAINVM GVGLLSTP T+ + GWAS ++L+ FAV+CCYTA LMK CFE++ GII+YPD+GEAAFG++GR+ + ++LYTELYSYCVEFII+EGDNLT LFPG S+DW + +DS HLF I TALVVLPTVWLKD+R+ISYLSAGGV+AT++I + +LG GG+GF+HTG AV W+GIP IG+YGFC+SGHSVFPNIYQSMADK++F KA+ F LC++LYGGVA MGY FG++TLSQITLNMP SK+A WTTV++P TKYALL+ PLARSIEELLP+ + +++WCF LLR LV S+V AF++PFFG V L+ Sbjct: 55 TFISQVQWPQSFRETTDSYTIAASPIFGSLLSNPSFYTPSFYRQSKSNLDVESKAPLLPERN-----EESDKASVTQSVWSHKGSFAEEL----PIGGYGCSFTQTIFNAINVMAGVGLLSTPFTVKEAGWASMVILLLFAVICCYTATLMKDCFEAKTGIITYPDIGEAAFGKYGRILICVILYTELYSYCVEFIILEGDNLTGLFPGTSIDWLGIRIDSKHLFGIFTALVVLPTVWLKDLRIISYLSAGGVIATVLIAVSTFFLGTTGGIGFNHTGPAVKWNGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFNKAVITTFILCVLLYGGVAIMGYCMFGEATLSQITLNMPKGLFFSKVAQWTTVVSPFTKYALLMNPLARSIEELLPERISENIWCFLLLRTALVASSVCSAFLIPFFGLVMALI 475
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Match: O80668_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g41190 PE=2 SV=2) HSP 1 Score: 555.058 bits (1429), Expect = 6.264e-178 Identity = 269/428 (62.85%), Postives = 333/428 (77.80%), Query Frame = 2 Query: 485 FTSQ-QWPQSFKETMDPYTITASPSFGLIGGISNFRHFSFSSQKSNLDLDGKLPLLPENRKSYSKEFLDSISGAQSTWSQKHSFAKQLTGEFPIA-YGCSVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLTKYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFFGKVWYLL 1762 F SQ QWPQSF+ET D YTI ASP FG + SN F + + +SNLD++ K PLLPE D S QS WS K SFA++L PI YGCSV QT+FNAINVM GVGLLSTP+T+ + GWAS ++L+ FAV+CCYTA LMK CFE++ GII+YPD+GEAAFG++GR+ + ++LYTELYSYCVEFII+EGDNLT LFPG SLD LDS HLF I+TAL+VLPTVWLKD+R+ISYLSAGGV+AT +I + + +LG GG+GFHHTG+AV W+GIP IG+YGFC+SGHSVFPNIYQSMADK++F KA+ CF +C++LYGGVA MGYL FG++TLSQITLNMP SK+A WTTV++P TKYALL+ PLARSIEELLP+ + +++WCF LLR LV S+V AF++PFFG + L+ Sbjct: 61 FISQVQWPQSFRETTDSYTIAASPIFGSLR--SNPPSF-YRASRSNLDVESKAPLLPERHDDS-----DKASATQSAWSHKGSFAEEL----PIGGYGCSVIQTIFNAINVMAGVGLLSTPYTVKEAGWASMVILLLFAVICCYTATLMKDCFENKTGIITYPDIGEAAFGKYGRILICMLLYTELYSYCVEFIILEGDNLTGLFPGTSLDLLGFRLDSKHLFGILTALIVLPTVWLKDLRIISYLSAGGVIATALIAVSVFFLGTTGGIGFHHTGQAVKWNGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFNKAVITCFIICVLLYGGVAIMGYLMFGEATLSQITLNMPQDQFFSKVAQWTTVVSPFTKYALLMNPLARSIEELLPERMSENIWCFLLLRTALVASSVCSAFLIPFFGLMMALI 476
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Match: A0A0B2QR79_GLYSO (Vacuolar amino acid transporter 1 (Fragment) OS=Glycine soja GN=glysoja_033056 PE=4 SV=1) HSP 1 Score: 555.058 bits (1429), Expect = 6.932e-178 Identity = 278/471 (59.02%), Postives = 336/471 (71.34%), Query Frame = 2 Query: 464 RGGPSTTFTSQQWPQSFKETMDPYTITASPSFGLIGGISNFRHFSFSSQ-KSNLDLDGKLPLL--PENRKSYSKEFLDSISGAQSTWSQKHSFAKQLTGEFPIAYGCSVTQTVFNAINVMVGVGLLSTPHTIAQGGWASFLVLIFFAVVCCYTAILMKYCFESREGIISYPDMGEAAFGRFGRLFVSIVLYTELYSYCVEFIIMEGDNLTRLFPGVSLDWPFLNLDSMHLFAIVTALVVLPTVWLKDIRLISYLSAGGVVATLVIVLCLLYLGAAGGVGFHHTGKAVNWSGIPVVIGVYGFCHSGHSVFPNIYQSMADKSQFKKAMQICFFLCIVLYGGVAAMGYLEFGQSTLSQITLNMPPQALVSKIALWTTVINPLT-----------------------------------KYALLLIPLARSIEELLPDHVVDSLWCFFLLRALLVFSTVGVAFVMPFFGKVWYLL 1762 R P + F+SQQWPQS+KET D YTI A+P+F + +F + SF ++ KSNLD+DGK P L PE + QSTW +K S + ++GE PI YGCS TQT+FN INV+ GVGLLSTP T+ Q GW S V++ FAV+CCYTA L++YCFESREGII+YPD+GEAAFGR+GR+ VSI+LYTELYSYCVEFI +EGDNLT LFPG SLD LDSMH+F ++TAL++LPTVWLKD+R+ISYLS GGVVAT++I++C+ +G VGFHHTG+ V W+GIP IGVYGFC +GHSVFPNIYQSMADK QF KA+ ICF LC+++YGG A+MGYL FG TLSQITLNMPP A SK+ALWTTVINPLT KYALL+ PLARS+EELLPD + S WCF LLR LV STV VAF++PFFG V L+ Sbjct: 28 RAQPDS-FSSQQWPQSYKETTDSYTIAAAPNFESVLRGPSFIYSSFDNRSKSNLDIDGKTPFLSAPEGIR-------------QSTWWEKASVERLVSGELPIGYGCSFTQTIFNGINVIAGVGLLSTPFTVNQAGWMSLAVMLLFAVMCCYTATLLRYCFESREGIITYPDVGEAAFGRYGRIAVSIILYTELYSYCVEFITLEGDNLTSLFPGTSLDLGGFKLDSMHMFGVLTALIILPTVWLKDLRIISYLSGGGVVATILIMICVFCVGTIDSVGFHHTGQLVKWNGIPFAIGVYGFCFAGHSVFPNIYQSMADKKQFTKALIICFVLCVLIYGGTASMGYLMFGDGTLSQITLNMPPGAFASKVALWTTVINPLTKYPFCQNYLAYESFKICHGLIKCSNPFSLAFLNSNKYALLMNPLARSLEELLPDRISSSYWCFMLLRTTLVASTVCVAFLVPFFGLVMALI 484 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 16
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BLAST of g.barbadense_cottongen_reftransV1_0093636 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093636 ID=g.barbadense_cottongen_reftransV1_0093636; Name=g.barbadense_cottongen_reftransV1_0093636; organism=Gossypium barbadense; type=contig; length=4567bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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