g.barbadense_cottongen_reftransV1_0093631, g.barbadense_cottongen_reftransV1_0093631 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A5C4E2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010682 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 5.645e-79 Identity = 156/338 (46.15%), Postives = 211/338 (62.43%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKA-----------EGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASN----VEKHPP-NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTF-LEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGRMK 2069 AEYMD+KTLWDR NDAINTIIR DESTETGE LQPCIEA+LNLGC RR RSQRN +PR YL E + QGN T S M+ Y++F+K ++M++ G E N++ T KF F+S P + N +E +P N +VYPL+ GN L+ EE + G+G+ SN +EPA MG I +LFS +D + K +QTD + + N +I CDLSLRLGPLS PC+S NS +E ++ S+ E +K S L+P +D+ PR N D PL+ ++R+ EG ++N++AT+ KRK + P+ D+QFC PKLP + L GRM+ Sbjct: 97 AEYMDLKTLWDRANDAINTIIRRDESTETGEFLQPCIEASLNLGCPQRRASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFIKPSSMSVIQPGLEPHSTAFHNNDCPTXKFLFSSENCPPSGNKCLQMEVYPASNLCAVYPLYDGNQLQCEESQCGFGVQSHPKSNPMEPAGMGTIQNLFSYAIDPTKKPSQTDFGHVTENSPKIDCDLSLRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKFSDLSPRVDKQFPFFPRGNTDDPLDSCLSKRSSEGENLNMEATMRKRKAVISYPLEDRQFCCQPKLPYNYLPGRMR 434 HSP 2 Score: 145.591 bits (366), Expect = 2.314e-33 Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 1 Query: 643 KMPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 +MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFRVVNEIHSSATKKNKEWQEKLPIVVLKAE+IMYSKANSE + T W Sbjct: 24 RMPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYMDLKTLW 106
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A067KF06_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07159 PE=4 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 9.144e-74 Identity = 156/343 (45.48%), Postives = 206/343 (60.06%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYL-------NQKAEG----TTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHPP-------NTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQ-FCLSPKLPCSELTGRMKRVGS 2081 AEYMD+KTLWDRTNDAINTIIR DESTETGELLQPCIEAALNLGCT RR RSQRNC+PR YL N + G T + N + C+ +YS+F+K T MN T +GSE Q I QN + ++KF F ++ S L SN ++ P + YSVYPL+YGN L + ++G GI PK+ + +EP +G+ +L S + D+ K++Q D + EI CDLSLRLG LS S N +++++ S P +D+ LS R N D + +E G H ++D L KRK ++G PVD Q + PKLPC++LTGRM+ VGS Sbjct: 73 AEYMDLKTLWDRTNDAINTIIRRDESTETGELLQPCIEAALNLGCTPRRASRSQRNCNPRCYLSPSTQQPNSSSPGIVNDTIRANHTASPQCIPNYSNFIKSTIMNSTQLGSELQNLICQNISIASNKFLFRTDNSRL-SNYNQYFPMENRSVSSLYSVYPLYYGNCL---DHQNGLGILPKTLPSILEPVKVGIEQNLLSCNEDAIAKIDQKDPIDKPIEQLEIGCDLSLRLGSLSAALPSMQNRHLQDVEDVGFGHSREGIKSNKMPQMDKELSLFNRGNMDYSSDSCPSEL---GRHDSLDVMLRKRKAVFGHPVDDQAYHWQPKLPCNDLTGRMRSVGS 408 HSP 2 Score: 144.821 bits (364), Expect = 1.159e-33 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFRVVNE+HSSATKKNKEWQEKLP+VVL+AE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEVHSSATKKNKEWQEKLPVVVLRAEEIMYSKANSEAEYMDLKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: B9HAE6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27080g PE=4 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.034e-69 Identity = 150/342 (43.86%), Postives = 197/342 (57.60%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYL-------NQKAEGTT----QGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHP------PNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTD-STFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQFCLSPKLPCSELTGRMKRVGS 2081 AEYM++KTLWDRTNDAINTIIR DESTE GELLQPCIEAALNLGCT RR RSQRNC+P YL N + G+ Q N +NSH + +YSS +K MN T GSE+Q + Q SN +++F F ++ PL++ + P P+ SVYPL+YG L E + G G PK+F +EP + V+ + F + D+ K D +++ P EI CDLSLRLG L P LS + K+ K+ E K+ P +D+ L R N PL +S++ H+N+D T KRK + V+ QFC PKL C++LT RMK GS Sbjct: 73 AEYMELKTLWDRTNDAINTIIRRDESTEIGELLQPCIEAALNLGCTPRRASRSQRNCNPSFYLSPSTQEPNTLSSGSVHSAIQANRTSNSHVLPNYSSMVKPIIMNSTPPGSESQDFVGQ-SNGTSNRFLFIDDSIPLSNANQCLPLGNYRIPSLCSVYPLYYGCCL---EPQRGCGALPKTFPGTMEPVKVAVMQNFFPCNEDTPVKTCHADHKDSPLQPQEIGCDLSLRLGSLPAPMLSVKTKQLKDAKDGGHDCSQEGGKVDDWMPQVDKELPFFTRVNVADPLVSHSSKSR---EHVNIDETKKKRKAVLDHHVEDQFCWQPKLHCNQLTCRMKSAGS 407 HSP 2 Score: 140.969 bits (354), Expect = 2.332e-32 Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFR+VNE HSS TKKNKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRLVNEAHSSTTKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMELKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: B9IKX7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01770g PE=4 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 6.287e-66 Identity = 147/343 (42.86%), Postives = 195/343 (56.85%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAE-----------GTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEK-------HPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTD-STFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGRMKRVG 2078 AEYMD+KTLWDR NDAINTIIR DES ETGELLQPCIEAALNLGCT RR RSQRNC+ R YL+ + + N I+NSHC+ YS+ +K T MN GSE+Q + Q N +++F F S+ P SNV + P+ SVYPL+YG+ L E + G G PK+F IEP + + + F + D+ + +Q ++ P EI CDLSLRLG + P A + K+ K+ E K P +D+ LS P+ + ++P + + H+ VD T+ KRK ++ V DQQF PKLPC++LTGRMK VG Sbjct: 114 AEYMDLKTLWDRANDAINTIIRRDESLETGELLQPCIEAALNLGCTPRRASRSQRNCNLRFYLSPSTQESNTLSPAAVHNAIRANHISNSHCLRDYSNLVKPTIMNSAPSGSESQDLVGQG-NDTSNRFLFRSDNIP-PSNVNRCLPLENYRIPSLCSVYPLYYGSCL---EPQRGCGALPKTFPGTIEPVKVVAVQNFFPCNEDTPVRTSQVGHKDCL-QPQEIECDLSLRLGSILAPVPRAKTKQIKDAKDGGHDCSQEGGKFDDWMPQMDKELSFFPKVDV---VDPQVSHSSKSREHIIVDVTMKKRKLVFDHHVEDQQFLWQPKLPCNKLTGRMKSVG 447 HSP 2 Score: 140.198 bits (352), Expect = 7.543e-32 Identity = 65/83 (78.31%), Postives = 71/83 (85.54%), Query Frame = 1 Query: 643 KMPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 KMPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFR+VNE H ATKKNKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 41 KMPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRLVNEAHCPATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKTLW 123
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: M5XQW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006474mg PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 4.767e-64 Identity = 149/341 (43.70%), Postives = 193/341 (56.60%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYL-----------NQKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLA-----SNVEKHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLT-PPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGRMKRVG 2078 AEYMD+KTLWDRTNDAINTIIR DE TETG+ LQPCIEAALNLGC RRT RSQR+ +P YL E +Q + +NS +F+K +M T +G E++ + QN++ T KF AS P + S E + +S YPL Y N + EE + G+ I PK S+ IEPA MGVI +L + D SN QTD R+ + NP + CDLSLRLGPLST NS+ +E+K+ + E S + P D S + + N P + YS+ N EG +MNV AT+ KRK + P D +F P+LP S LTG M+ G Sbjct: 73 AEYMDLKTLWDRTNDAINTIIRRDEGTETGDFLQPCIEAALNLGCIPRRTSRSQRHANPSCYLIPITSDVPGISPSVVENASQRDYTSNSQYRPHCPNFVKPKSMT-TQLGFESRFPVVQNNDCTTMKFRIASENIPPSGYDQFSPRESMATSNFSSYPLHYRNFPQFEELKPGFVILPKPVSDPIEPAKMGVISNLLC-NGDKSNDNTQTDTRDYTENPCTVGCDLSLRLGPLSTQHSIGENSQPEEVKDVGAQ--EGTMCSDQSQPQFDRRPSFIGKGNEYGPRDSYSSRLNFEGEYMNVQATMRKRKAAFNHPTGDTKFYRQPELPFSHLTGSMRNGG 409 HSP 2 Score: 140.584 bits (353), Expect = 2.815e-32 Identity = 66/82 (80.49%), Postives = 72/82 (87.80%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPR GPRPY C RRAWHS+RHQPMRGSLI+EIFRVVNEIHSSAT+KNKEWQ+KLPIVVLKAE+IMYSKANSE + T W Sbjct: 1 MPRSGPRPYECVRRAWHSERHQPMRGSLIKEIFRVVNEIHSSATRKNKEWQDKLPIVVLKAEEIMYSKANSEAEYMDLKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A067FEY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017107mg PE=4 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 4.564e-62 Identity = 146/338 (43.20%), Postives = 186/338 (55.03%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN------QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVE----KHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGR---MKRVGS 2081 AEYMD+KTL DRTNDAINTIIR DESTETGELL PCIEAALNLGC RRT RSQRN +PR YLN E QGN + S MA Y SF+K T S Q + QN N +K PFAS P + N + ++ P S YPL+YG K EE I P + P+ S N Q +++T +NP +I CDLSLRLGP S PC S +++ +++K S E NKI L P +++ L + ++N + PL S++ ++EG +VD + KRK + + D+ F PKLP S LTGR MK GS Sbjct: 73 AEYMDLKTLLDRTNDAINTIIRLDESTETGELLPPCIEAALNLGCMPRRTSRSQRNNNPRCYLNTGIQEPSNVENVPQGNHLVQSQGMAPYCSFMKQTM-------SATQNLVVQNINGCANKLPFASQNVPPSGNKQCFSLENYPAAPSAYPLYYGTCFKFEE---------------IPPGLENF------PNPTSKN--TQRYIKDTPDNPQDIGCDLSLRLGPFSVPCPSFEHNQQEQVKEVGSRSQEVNKIGDLVPQLNKQLLFVSKTNDNYPLEACSSQWSVEG---DVDTNMRKRKVVSAQSLEDEYFGWQPKLPGSRLTGRRKSMKSAGS 377 HSP 2 Score: 142.51 bits (358), Expect = 4.539e-33 Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPLF 891 MPRPGPRPY C RRAWHS+RHQPMRGSLI+EIFRVVNEIHS ATKKNKEWQEKLP+VVLK+E+IMYSKANSE + L Sbjct: 1 MPRPGPRPYECVRRAWHSERHQPMRGSLIQEIFRVVNEIHSEATKKNKEWQEKLPVVVLKSEEIMYSKANSEAEYMDLKTLL 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: V4TSZ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008661mg PE=4 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 4.057e-61 Identity = 146/338 (43.20%), Postives = 185/338 (54.73%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN------QKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVE----KHPPNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGR---MKRVGS 2081 AEYMD+KTL DRTNDAINTIIR DESTETGELL PCIEAALNLGC RRT RSQRN +PR YLN E QGN S MA Y SF+K T S Q + QN N +K PFAS P + N + ++ P S YPL+YG K EE I P + P+ S N Q +++T +NP +I CDLSLRLGP S PC S +++ +++K S E NKI L P +++ L + ++N + PL S++ ++EG +VD + KRK + + D+ F PKLP S LTGR MK GS Sbjct: 73 AEYMDLKTLLDRTNDAINTIIRLDESTETGELLPPCIEAALNLGCLPRRTSRSQRNNNPRCYLNTGIQEPSNVENVPQGNHSVQSQGMAPYCSFMKQTM-------SATQNLVVQNINGCANKLPFASQNVPPSGNKQCFSLENYPAAPSAYPLYYGTCFKFEE---------------IPPGLENF------PNPTSKN--TQRYIKDTPDNPQDIGCDLSLRLGPFSVPCPSFEHNQQEQVKEVGSRSHEVNKIGDLVPQLNKQLLFVSKTNDNYPLEACSSQWSVEG---DVDTNMRKRKVVSAQSLEDEYFGWQPKLPGSRLTGRRKSMKSAGS 377 HSP 2 Score: 142.124 bits (357), Expect = 5.477e-33 Identity = 65/82 (79.27%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPLF 891 MPRPGPRPY C RRAWHS+RHQPMRGSLI+EIFRVVNEIHS ATKKNKEWQEKLP+VVLK+E+IMYSKANSE + L Sbjct: 1 MPRPGPRPYECVRRAWHSERHQPMRGSLIQEIFRVVNEIHSEATKKNKEWQEKLPVVVLKSEEIMYSKANSEAEYMDLKTLL 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: B9RP39_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0923940 PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.586e-56 Identity = 139/340 (40.88%), Postives = 188/340 (55.29%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAEGTTQGNLI--------TNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHP------PNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEI--KNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPVDQQ-FCLSPKLPCSELTGRMKRVG 2078 AEYMD+KTLW+R ND INTI+R DESTETG+LL PCIEAALNLGCT RRT RSQRNC+PR YL GT + N + T+ C+ +Y +K +N T +GSE Q + QN + ++KF A++ L++ + P + YSVYPL YG+ P S+ +EP +GV +LFS D++ K NQ D ++ N HE CDLSLRLG LS L + +R + N +F E K D+ L + R N D L+ S++ + H +V+ + KRK +G PVD Q C KLPC++LTG+ K G Sbjct: 73 AEYMDLKTLWERVNDVINTIVRRDESTETGDLLLPCIEAALNLGCTPRRTSRSQRNCNPRCYL---TPGTQEPNTLPPAMPTHTTSLQCIPNYLDLIKPAIVNSTHLGSELQNLVCQNISVTSNKFLLATDNGCLSNYNQSFPMENYPMSSLYSVYPLC-------------YGLIP--VSSTLEPGKVGVEQNLFSFGDDAAVKFNQPDPQSPLNQ-HETGCDLSLRLGSLSAAPLPSDKNRQLQDFEDNGHGSFQEGIKFKTQMQHTDDELHFVTRLNTDNSLDSCSSKLS---EHASVNGIIKKRKADFGLPVDDQACCWWLKLPCNDLTGKKKSGG 390 HSP 2 Score: 143.28 bits (360), Expect = 2.929e-33 Identity = 66/82 (80.49%), Postives = 72/82 (87.80%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFRVVNE+HS ATKKNKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPVRGSLIQEIFRVVNEVHSPATKKNKEWQEKLPVVVLKAEEIMYSKANSEAEYMDLKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: W9QLC3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004495 PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.685e-50 Identity = 133/326 (40.80%), Postives = 177/326 (54.29%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLNQKAEGTTQGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEK-------HPPNTYSVYPLFYGNHLKVEEQRHG-YGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTDSTFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV--DQQFCLSPKLPCSELT 2057 AEYMD+KTLWDRTNDAINTIIR DESTETGE LQPCIEAALNLGCT RR+ RSQRNC PR YL+ + ++ NS A+ S+F++ + + S+ + +AQN+ KF N P SN EK N++S YPL Y N + + + G + PK S+ +E A G + S + D+S K + +R + +I CDLSLRLGPLS S N + +++K K P +D+ PR N L G + +++AT+ KRK ++ PV DQQFCL KLP S LT Sbjct: 73 AEYMDLKTLWDRTNDAINTIIRRDESTETGEFLQPCIEAALNLGCTPRRSSRSQRNCHPRCYLSPNTPDVSP-SMADNS---ANGSTFVRPS----NHLSSDPRSLVAQNNISTAIKF---ENVPP--SNYEKLLAMSNYAATNSFSTYPLCYPNFPQFGQLQPGCVNLPPKPVSDVLETAKGGAVLSSACHE-DASKKNVEPSIREVAEKTCKIGCDLSLRLGPLSVAVPSVENKQSQDVKEVSPQ--GGGKFCDELPILDKGFPLFPRGNAYEAL----------GSYNSIEATVRKRKAVFDQPVTEDQQFCLPAKLPFSHLT 372 HSP 2 Score: 141.739 bits (356), Expect = 7.051e-33 Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFF---TFW 882 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFRV NEIHSS+TK+NKEWQEKLP+VVLKAE+IMYSKANSE + T W Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPIRGSLIKEIFRVANEIHSSSTKQNKEWQEKLPMVVLKAEEIMYSKANSEAEYMDLKTLW 82
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Match: A0A068V0V2_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_75 OS=Coffea canephora GN=GSCOC_T00038492001 PE=4 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.984e-43 Identity = 127/339 (37.46%), Postives = 179/339 (52.80%), Query Frame = 3 Query: 1110 AEYMDIKTLWDRTNDAINTIIRGDESTETGELLQPCIEAALNLGCTARRTLRSQRNCSPRSYLN-QKAEGTT----------QGNLITNSHCMASYSSFLKHTTMNMTDMGSEAQKHIAQNSNRGTDKFPFASNTSPLASNVEKHP------PNTYSVYPLFYGNHLKVEEQRHGYGISPKSFSNKIEPAMMGVIHSLFSPDVDSSNKMNQTDVRNTSNNPHEIPCDLSLRLGPLSTPCLSAGNSRHKEIKNTD--STFLEWNKISYLTPPIDESLSSLPRSNRDAPLNPYSNERNLEGGHMNVDATLSKRKTIYGSPV-DQQFCLSPKLPCSELTGRM 2066 AEY+DI TL DR NDAINTIIR DESTETGELLQPCIEAAL+LGCT RR+ RSQRN +PR YLN +K E + QGN TN + + L MN D Q ++ ++P N+ + N + P ++ SVYPL++GNH + ++ S KS S+ ++ GV+ + D+ N ++Q S PH CDLSLRLGPL CL NS +E+++ T +K + L+ D+ S P+ N L+ SN+ + + ++N++ATL KRK P D+Q+ K P ++ GR+ Sbjct: 73 AEYVDINTLRDRANDAINTIIRRDESTETGELLQPCIEAALHLGCTPRRSSRSQRNITPRCYLNPEKPEAISVSLTNLDNKVQGNYATNCSFIPQSPNLL----MNSADTCLNYDNSGIQKTD---SEYPKLRNSPSI--NHQSRPRLAPSLSSSCSVYPLYHGNHFQFQD-------SSKSNSHLMKTDKKGVMKRRSTCGQDALNVISQASSHYVSETPHGSGCDLSLRLGPLGVSCLGEENSCPQEVEDGGGLGTCKVGSKDNDLSSQSDKDFSFFPKPNGHDMLDSSSNKWSHKTQNVNIEATLRKRKVAVSHPSEDRQYRWPLKFPFKQVNGRI 395 HSP 2 Score: 145.976 bits (367), Expect = 4.517e-34 Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 1 Query: 646 MPRPGPRPYVCERRAWHSDRHQPMRGSLIREIFRVVNEIHSSATKKNKEWQEKLPIVVLKAEKIMYSKANSEVNFFTFWPL 888 MPRPGPRPY C RRAWHSDRHQP+RGSLI+EIFR+VNEIHSSATKKNKEWQEKLPIVVLKAE+IMYSKANSE + L Sbjct: 1 MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRIVNEIHSSATKKNKEWQEKLPIVVLKAEEIMYSKANSEAEYVDINTL 81 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0093631 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093631 ID=g.barbadense_cottongen_reftransV1_0093631; Name=g.barbadense_cottongen_reftransV1_0093631; organism=Gossypium barbadense; type=contig; length=2607bpback to top |