g.barbadense_cottongen_reftransV1_0093436, g.barbadense_cottongen_reftransV1_0093436 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: Y249_METTH (Uncharacterized protein MTH_249 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_249 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.037e-16 Identity = 54/186 (29.03%), Postives = 93/186 (50.00%), Query Frame = -2 Query: 1421 IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMA--------------DDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1936 + L++M++++ S VF+ G GR L+ KA MRL HLG H V D+TTP I +D L+A +G G TV +RS G V+ +TA PE+ + +++VV + ++T DD L PMG+++E + + + ++ + +LG+ + ++ RH +E Sbjct: 25 VDEAELEMMISKIMDASS----VFIVGTGRSELIGKAFAMRLMHLGFKVHVVGDVTTPAIRDEDCLIAISGSGETKTVTLAAETSRSVGATVVAVTATPES-TLTGYSDVVICIPSKTKEPWKYYTSGVLRGEYDD--------LTPMGTLFEDSTHLFLDGLIAEFMSILGKREKDLKERHAIIE 197
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: Y1940_AERPE (Uncharacterized protein APE_1940.1 OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=APE_1940.1 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.062e-15 Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = -2 Query: 1421 SMASLASQICNDIASIFSKPSIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLL-------PMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1999 +M+ +A I N I I +D V EL +K +V + G GR GL+ KA MRL HLG +++ + + P + DL+VA +G G + A+ G V +T P++ R +++V V +T + +R +L P+G+++E V + V+Y L LG E +R H N+E Sbjct: 19 TMSEIALFIINSINEI------DVGQVDRFVGELERVYREKRKVLVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVPSVREGDLVVAISGSGRTKVIVTAAETAKQVGATVAAITTYPDSPLG-RLSDIVVRVPGRTKSSKMDDYFARQILGIHEPLAPLGTLFEDTTMVFLDGVIYSLMTRLGIDEEYMRNMHANVE 211
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: PHI_METAM (3-hexulose-6-phosphate isomerase OS=Methylomonas aminofaciens GN=rmpB PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.349e-13 Identity = 46/161 (28.57%), Postives = 82/161 (50.93%), Query Frame = -2 Query: 1421 ELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1903 ++ S V GR F+ G GR L+ + MRL H G V ++ TP I + DL + +G G T+ + A+S G ++++++ + ++ + A++V V D +K+ +PMG+++E + E + KL + G + E +RA H NLE Sbjct: 26 KILSLVDAAGRTFIGGAGRSLLVSRFFAMRLVHAGYQVSMVGEVVTPSIQAGDLFIVISGSGSTETLMPLVKKAKSQGAKIIVISMKAQSPMA-ELADLVVPVGGN---DANAFDKTHG-MPMGTIFELSTLWFLEATIAKLVDQKGLTEEGMRAIHANLE 181
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: Y1796_ARCFU (Uncharacterized protein AF_1796 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1796 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.462e-12 Identity = 47/163 (28.83%), Postives = 84/163 (51.53%), Query Frame = -2 Query: 1421 VAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1909 V E+ + +F+ G GR G + KA MRL HLG + + V + TP IT +D+LVA +G G ++V I A+ G +++ +T + ++ S + A+VV V + + E L P+G+++E + + +V ++ + + + ARH LE Sbjct: 24 VGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGKRDS-SLAKMADVVMVVKGKMKQER--DEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTEKDLEARHAVLE 183
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: PHI_METJA (3-hexulose-6-phosphate isomerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=phi PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.110e-10 Identity = 42/159 (26.42%), Postives = 75/159 (47.17%), Query Frame = -2 Query: 1424 LASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNL 1900 L + + ++F++GVGR G + + MRL HLG ++FV + TTP DLL+ +G G +V + A++ ++ + E G+ V A++ + K LPMG+ +E + ++V+ ++ + L I RH NL Sbjct: 33 LIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVC--ECGNVVEFADLTIPLEV----------KKSKYLPMGTTFEETALIFLDLVIAEIMKRLNLDESEIIKRHCNL 179
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: B9ID53_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13430g PE=4 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 2.808e-94 Identity = 155/205 (75.61%), Postives = 174/205 (84.88%), Query Frame = -2 Query: 1421 MDTGNGSMASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMA-----DDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 2017 M T SM+SLAS+ICN +ASIF+KP+ HPP LDLM+ L ST +Q GRVFLYGVGREGLMLKALCMRLAHLG+S HFVFDMTTPPITS DLL+ASAGPGGFSTVDA+CS+ARS+G VLLLTAQPETGS V+HA+VV YV AQTMA DGG EKSR L+PMGSV+EGA+FV FEMVVYKLGE LG+SPE IR+RHTNLE Sbjct: 1 MGTETPSMSSLASRICNHMASIFAKPTGPHPPPLDLMITTLTSTAAQNGRVFLYGVGREGLMLKALCMRLAHLGISTHFVFDMTTPPITSNDLLIASAGPGGFSTVDALCSLARSYGATVLLLTAQPETGSCVKHASVVCYVPAQTMADDKGDGDGGEEKSRPLMPMGSVFEGALFVFFEMVVYKLGEALGQSPEVIRSRHTNLE 205
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A072VQM0_MEDTR (3-hexulose-6-phosphate isomerase, putative OS=Medicago truncatula GN=MTR_1g100753 PE=4 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 5.847e-93 Identity = 153/195 (78.46%), Postives = 174/195 (89.23%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGE--KSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 MAS+A+QICN I+SIFS P+ +PP LDL++ EL++ SQ GRVFLYGVGREGLMLKA CMRLAHLGLSAH VFDMTTPPIT+ DLL+ASAGPGGFSTVDAICSVARS+GGRVLLLTAQPETGS V+HA+VVAYV A+TMA+D E KSR LLPMGSVYEGA+FVLFEM VYKLG++LGESPEA+R+RHTNLE Sbjct: 12 MASVATQICNQISSIFSTPTHPYPPPLDLLLTELSTISSQNGRVFLYGVGREGLMLKAFCMRLAHLGLSAHLVFDMTTPPITTNDLLIASAGPGGFSTVDAICSVARSNGGRVLLLTAQPETGSCVKHASVVAYVPAKTMANDKDEEDVKSRPLLPMGSVYEGALFVLFEMAVYKLGDILGESPEAVRSRHTNLE 206
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A0A0LBC8_CUCSA (3-hexulose-6-phosphate isomerase OS=Cucumis sativus GN=Csa_3G181970 PE=4 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 9.715e-92 Identity = 145/197 (73.60%), Postives = 170/197 (86.29%), Query Frame = -2 Query: 1421 SMASLASQICNDIASIFSKPSI-HPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADD---GGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1999 S ASLAS+IC++IASIFSKP+ + P L+++V+EL+S +K RVFLYGVGREGLMLKALCMRLAHLGLS+H VFDM PPI DLL+ASAGPGGFSTVDAICSVARS GGRVL+LTAQPE GSSV++A+V+ YV AQTMADD G + R LLPMGS+YEGA+FVLFEMVVY++GEVLGESPEA+R+RHTNLE Sbjct: 5 SPASLASRICSEIASIFSKPTQPYAPPLEILVSELSSVAERKARVFLYGVGREGLMLKALCMRLAHLGLSSHQVFDMNAPPIAGSDLLIASAGPGGFSTVDAICSVARSKGGRVLVLTAQPENGSSVKYADVICYVPAQTMADDEESGEAAEWRPLLPMGSLYEGALFVLFEMVVYRIGEVLGESPEAVRSRHTNLE 201
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: I1LDT1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 2.706e-91 Identity = 150/196 (76.53%), Postives = 166/196 (84.69%), Query Frame = -2 Query: 1421 ASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYV----AAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1993 AS+A++IC IASIFSKP+ +PP LDL+V ELAS SQ GRVFLYGVGREGLMLKALCMRL HLGLSAHFVFDMTTPPI + DLL+ASAGPGGFSTVDA+C+VARS+GGRVLLLTAQPETGS V+HAN VAYV A AD KSR LLPMGSVYE A+FVLFEMVVYKLGE LGESPE++R+RHTNLE Sbjct: 10 ASMATEICTQIASIFSKPTHPYPPPLDLLVTELASVASQNGRVFLYGVGREGLMLKALCMRLFHLGLSAHFVFDMTTPPIDAADLLIASAGPGGFSTVDALCAVARSNGGRVLLLTAQPETGSCVKHANAVAYVAAQTMADDDADAERDAKSRPLLPMGSVYEAALFVLFEMVVYKLGEALGESPESVRSRHTNLE 205
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: M5X3N7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021377mg PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 5.146e-90 Identity = 148/190 (77.89%), Postives = 163/190 (85.79%), Query Frame = -2 Query: 1421 ICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADD---GGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGE-SPEAIRARHTNLE 1975 ICN IASIF+KP+ HPP LDL+V EL+S ++ G VFLYGVGREGLMLKALCMRLAHLGLSAH VFDMTTPPI++ DLL+ASAGPGGFSTV+AICSVARSHG RVLLLTAQPETGS V HA+VV YV AQTMA+D G +SR LLPMGS YEGA+FVLFEMVVYKL E LG+ SPEAIRARHTNLE Sbjct: 17 ICNHIASIFTKPTHPHPPVLDLLVNELSSAAARNGGVFLYGVGREGLMLKALCMRLAHLGLSAHMVFDMTTPPISTTDLLIASAGPGGFSTVEAICSVARSHGARVLLLTAQPETGSCVAHASVVGYVPAQTMANDADAGDVMESRPLLPMGSAYEGALFVLFEMVVYKLAEALGQTSPEAIRARHTNLE 206
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: V4LTT5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015742mg PE=4 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 8.432e-90 Identity = 146/196 (74.49%), Postives = 163/196 (83.16%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKP-SIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGG--GEK-SRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 M+ L+SQICN I+S+FS P S +PP LDL+V ELA + RVFL+GVGREGLMLKA MRL HLGLS+H V DMTTPPI+S DLL+ASAGPGGFSTVDAICSVARS G +VLLLTAQPETGS V+HA V Y+ AQTMA DGG EK R LLPMGSVYEGA+FVLFEMVVYKLGEVLGESPE+IR+RHTNLE Sbjct: 9 MSKLSSQICNQISSVFSNPTSPYPPPLDLLVTELAGVSRRNSRVFLHGVGREGLMLKAFAMRLFHLGLSSHLVSDMTTPPISSSDLLIASAGPGGFSTVDAICSVARSSGAKVLLLTAQPETGSCVKHATAVCYIPAQTMASDGGDAAEKGERRLLPMGSVYEGALFVLFEMVVYKLGEVLGESPESIRSRHTNLE 204
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A059DK06_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02801 PE=4 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.114e-89 Identity = 146/203 (71.92%), Postives = 166/203 (81.77%), Query Frame = -2 Query: 1421 NGSMASLASQICNDIASIFSKPSIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGG--------GEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 2005 + SM +LASQICN IAS+FS P+ HPPALD++V+EL++ S+ GRVFLYGVGREGLM+KALCMRLAHLGL AH VFD+TTPPI DLL+ASAGPGGFSTVDAICSVARSHGGRV+LLTAQPETG+ RHA+ VA+V AQTMADD R LLPMGSV+EGAMFVLFEMVVY+LGEVLGESPEA+ NLE Sbjct: 10 DTSMPALASQICNHIASVFSMPTAHPPALDVLVSELSAAASRGGRVFLYGVGREGLMMKALCMRLAHLGLQAHSVFDVTTPPIAGGDLLLASAGPGGFSTVDAICSVARSHGGRVVLLTAQPETGTCARHASAVAHVPAQTMADDAARRRRRGGRRGGPRPLLPMGSVFEGAMFVLFEMVVYRLGEVLGESPEAVPISPHNLE 212
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: D7MRN8_ARALL (Sugar isomerase domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495287 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 4.825e-87 Identity = 140/200 (70.00%), Postives = 165/200 (82.50%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKP-SIHPPALDLMVAELASTVSQKG--RVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGE-----KSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 MA+L+SQICN I+S+F+KP S +PP LDL+V ELA+ + R+FLYGVGREGLMLKA MRL HLGLS H VFDMTTPPI+S DLL+ASAGPGGFSTVDAICSVA+S+G +V+L+TA+PE GS V+HA V YV AQTMA D GG+ + R LLPMGSVYEGA+FVLFEMVVYKLG+VLGES E++RARHTNLE Sbjct: 9 MANLSSQICNQISSVFTKPTSPYPPPLDLLVTELAAISRNRNNSRIFLYGVGREGLMLKAFAMRLFHLGLSTHLVFDMTTPPISSSDLLIASAGPGGFSTVDAICSVAKSNGAKVILITAEPEIGSCVKHATDVCYVPAQTMASDIGGDAAAEMEERRLLPMGSVYEGALFVLFEMVVYKLGDVLGESSESVRARHTNLE 208
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: M1B4W8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014325 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 6.287e-87 Identity = 138/193 (71.50%), Postives = 163/193 (84.46%), Query Frame = -2 Query: 1421 ASLASQICNDIASIFSKPSIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADD--GGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1993 A LAS+ICN I+S+F+ S +P ALD++V E+A ++ GRVFLYGVGREGLMLKAL MRL HLGLSAH VFDM TPPI DLL++SAGPGGFSTVDAI VA+ +G RVLLLTAQP++GSS+++A+ VAY+ AQTMADD G GEK R LLPMGSVYEGAMFVLFEMVV+KLGE+L +SPEA+RARHTNLE Sbjct: 10 ALLASKICNQISSVFTAKSPNPAALDVLVQEIADAANRNGRVFLYGVGREGLMLKALSMRLFHLGLSAHCVFDMNTPPIGPSDLLISSAGPGGFSTVDAISGVAKFNGARVLLLTAQPDSGSSMKYASAVAYIPAQTMADDNAGDGEKERPLLPMGSVYEGAMFVLFEMVVFKLGEILKQSPEAVRARHTNLE 202
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: M4EK17_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra029134 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 6.916e-87 Identity = 143/196 (72.96%), Postives = 162/196 (82.65%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGG--EK-SRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 M+ L+SQICN I+S+FS P+ +PP LDL+V EL + RVFL+GVGREGLMLKA MRL HLGLS+H V DMTTPPI+S DLL+ASAGPGGFSTVDAICSVA+S G +V+L+TAQPETGS V+HA V YV AQTMA DGGG EK R LLPMGSVYEGA+FVLFEMVVYKLGEVLGESPE+IR RHTNLE Sbjct: 1 MSRLSSQICNQISSVFSNPTDPYPPTLDLLVTELTGVSRRGARVFLHGVGREGLMLKAFAMRLFHLGLSSHLVSDMTTPPISSPDLLIASAGPGGFSTVDAICSVAKSAGAKVVLITAQPETGSCVKHATDVCYVPAQTMASDGGGATEKGERPLLPMGSVYEGALFVLFEMVVYKLGEVLGESPESIRCRHTNLE 196 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 15
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BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093436 ID=g.barbadense_cottongen_reftransV1_0093436; Name=g.barbadense_cottongen_reftransV1_0093436; organism=Gossypium barbadense; type=contig; length=2132bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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