g.barbadense_cottongen_reftransV1_0093436, g.barbadense_cottongen_reftransV1_0093436 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: CASL2_CANSA (Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.759e-45 Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 937 LTL*NSLFQRSKSTAM-VFVA*GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKGNYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 +T+ L++ M VF GG M+EI E+ P PHRAG + I Y+ E++E+ +EK ++W+R VYN+ TP+++++PR Y+NYRDLD+G F + NY QARIWG KYF NFNRLV + TK+ P Sbjct: 398 VTILEKLYEEDVGVGMFVFYPYGGIMDEISESAIPFPHRAGITYEIWYIASWEKQED--NEKHINWIRNVYNFTTPYVSQNPRMAYLNYRDLDLGKTNFES-PNNYTQARIWGEKYFGKNFNRLVKVKTKVDP 527 HSP 2 Score: 63.929 bits (154), Expect = 4.759e-45 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 672 ERVKSSKDEDKMTIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYFEQF----PIGAPLETLLGRNHXXXXXXXXXXXXXDFVKQPIPE 965 + ++ ++K TI + FSS+F GG D L+ LM + FP+LG+ K DC ++SW ++ +++ E LL R+ K+ F K D+VK+PIPE Sbjct: 296 RNITDNQGKNKTTIHSYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKQLSWIDTIIFYSGVVNYNTTNFKKEILLDRS---GGRKAAFSIKLDYVKKPIPE 394 HSP 3 Score: 30.4166 bits (67), Expect = 4.759e-45 Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = 2 Query: 449 KSIGEDMFWAIRXXXXXXXXALG*S*LGKQTRCQFQLMSPFSEFTECWIK--------TQLIHQWQYVAHKFPKEIHMSIH 667 KS+GED+FWAIR G G + +L++ S T +K +L+++WQ +A+ + KE+ + H Sbjct: 220 KSMGEDLFWAIR--------GGGGENFGIIAAWKIRLVAVPSMSTIFSVKKNMEIHELVKLVNKWQNIAYMYEKELLLFTH 292 HSP 4 Score: 28.8758 bits (63), Expect = 4.759e-45 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 1335 NFFRHEQSIPPL 1370 NFFR+EQSIPPL Sbjct: 529 NFFRNEQSIPPL 540
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: CASL1_CANSA (Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.435e-45 Identity = 61/133 (45.86%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 937 LTL*NSLFQRSKSTAM-VFVA*GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKGNYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 +T+ L++ M VF GG M+EI E+ P PHRAG ++ I Y+ E++E+ +EK ++W+R VYN+ TP+++++PR Y+NYRDLD+G F + NY QARIWG KYF NFNRLV + TK+ P Sbjct: 398 VTILEKLYEEDVGVGMFVFYPYGGIMDEISESAIPFPHRAGIMYEIWYIASWEKQED--NEKHINWIRNVYNFTTPYVSQNPRMAYLNYRDLDLGKTNFES-PNNYTQARIWGEKYFGKNFNRLVKVKTKVDP 527 HSP 2 Score: 62.7734 bits (151), Expect = 6.435e-45 Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 672 ERVKSSKDEDKMTIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYFEQFPIGAPL----ETLLGRNHXXXXXXXXXXXXXDFVKQPIPE 965 + ++ ++K TI + FSS+F GG D L+ LM + FP+LG+ K DC ++SW ++ +++ E LL R+ K+ F K D+VK+PIPE Sbjct: 296 RNITDNQGKNKTTIHSYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKQLSWIDTIIFYSGVVNYNTTYFKKEILLDRS---GGRKAAFSIKLDYVKKPIPE 394 HSP 3 Score: 30.0314 bits (66), Expect = 6.435e-45 Identity = 23/81 (28.40%), Postives = 39/81 (48.15%), Query Frame = 2 Query: 449 KSIGEDMFWAIRXXXXXXXXALG*S*LGKQTRCQFQLMSPFSEFTECWIK--------TQLIHQWQYVAHKFPKEIHMSIH 667 KS+GED+FWAIR G G + +L++ S T +K +L+++WQ +A+ + KE+ + H Sbjct: 220 KSMGEDLFWAIR--------GGGGENFGIIAAWKIRLVAVPSMSTIFSVKKNMEIHELVKLVNKWQNIAYMYEKELLLFTH 292 HSP 4 Score: 28.8758 bits (63), Expect = 6.435e-45 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 1335 NFFRHEQSIPPL 1370 NFFR+EQSIPPL Sbjct: 529 NFFRNEQSIPPL 540
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: CBDAS_CANSA (Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.180e-44 Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 1000 GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKGNYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 GG M+EI E+ P PHRAG ++ + Y+ E++E+ +EK ++W+R +YN+MTP+++K+PR Y+NYRDLDIG+N N NY QARIWG KYF NF+RLV + T + P Sbjct: 419 GGIMDEISESAIPFPHRAGILYELWYICSWEKQED--NEKHLNWIRNIYNFMTPYVSKNPRLAYLNYRDLDIGINDPKN-PNNYTQARIWGEKYFGKNFDRLVKVKTLVDP 526 HSP 2 Score: 63.5438 bits (153), Expect = 3.180e-44 Identity = 36/106 (33.96%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 672 ERVKSSKDEDKMTIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYF--------EQFPIGAPLETLLGRNHXXXXXXXXXXXXXDFVKQPIPE 965 + ++ ++K I FSS+FLGG D L+ LM + FP+LG+ K DC ++SW ++ +++ + F L+ G+N FK K D+VK+PIPE Sbjct: 295 RNITDNQGKNKTAIHTYFSSVFLGGVDSLVDLMNKSFPELGIKKTDCRQLSWIDTIIFYSGVVNYDTDNFNKEILLDRSAGQN-------GAFKIKLDYVKKPIPE 393 HSP 3 Score: 30.4166 bits (67), Expect = 3.180e-44 Identity = 17/62 (27.42%), Postives = 33/62 (53.23%), Query Frame = 1 Query: 427 LMEEFLIKIHWR---RYVLGHSRRWXXX---XXSFGVVLAWKTNSVPVPANVTVFRVHRMLD 594 +++ L+ +H + R +G W SFG+++AWK V VP + T+F V ++++ Sbjct: 204 IIDAHLVNVHGKVLDRKSMGEDLFWALRGGGAESFGIIVAWKIRLVAVPKS-TMFSVKKIME 264 HSP 4 Score: 28.8758 bits (63), Expect = 3.180e-44 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 1332 QNFFRHEQSIPPL 1370 NFFR+EQSIPPL Sbjct: 527 NNFFRNEQSIPPL 539
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: THCAS_CANSA (Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.306e-42 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 1000 GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKG--NYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 GG M EI E+ P PHRAG ++ + Y E++E+ +EK ++W+R VYN+ TP+++++PR Y+NYRDLD+G NH NY QARIWG KYF NFNRLV + TK+ P Sbjct: 420 GGIMEEISESAIPFPHRAGIMYELWYTASWEKQED--NEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGK---TNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDP 527 HSP 2 Score: 64.3142 bits (155), Expect = 1.306e-42 Identity = 45/136 (33.09%), Postives = 68/136 (50.00%), Query Frame = 3 Query: 570 FQSSQNVGSKRN*FISGSMLHTSFLKKYT*AST*ERVKSSKDEDKMTIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYFEQF----PIGAPLETLLGRNHXXXXXXXXXXXXXDFVKQPIPE 965 F QN+ K + +L T F+ K + + ++K T+ FSS+F GG D L+ LM + FP+LG+ K DC E SW ++ +++ E LL R+ A K+ F K D+VK+PIPE Sbjct: 273 FNKWQNIAYKYD---KDLVLMTHFITK--------NITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILLDRS---AGKKTAFSIKLDYVKKPIPE 394 HSP 3 Score: 30.4166 bits (67), Expect = 1.306e-42 Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 511 FGVVLAWKTNSVPVPANVTVFRVHRMLD 594 FG++ AWK V VP+ T+F V + ++ Sbjct: 238 FGIIAAWKIKLVAVPSKSTIFSVKKNME 265 HSP 4 Score: 28.8758 bits (63), Expect = 1.306e-42 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 1332 QNFFRHEQSIPPL 1370 NFFR+EQSIPPL Sbjct: 528 NNFFRNEQSIPPL 540
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.112e-32 Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 979 AMVFVA*GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKGN-YAQARIWGLKYFKNNFNRLVHITTKLGP 1332 +VF GGKM E+ P PHR +F I Y V+ +E + +++ + +Y++MT F++K+PR Y NYRD+DIGV N+H N Y + ++G KYF NF+RLV I T + P Sbjct: 409 GLVFNPYGGKMAEVAVNAKPFPHR-NKLFKIQYSVNWKENSAEIEKGYLNQAKVLYSFMTGFVSKNPRSSYFNYRDVDIGV---NDHGANSYKEGEVYGRKYFGENFDRLVKIKTAVDP 523 HSP 2 Score: 53.5286 bits (127), Expect = 2.112e-32 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 708 TIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYFEQFPIGAPLE--TLLGRNHXXXXXXXXXXXXXDFVKQPIPEKQI 974 T++A ++FLG D+++ L+ ++FP+LGL KE+C EM+W +S L+++ ++ L RN + SF K KSD+V IP+K I Sbjct: 308 TVRASVVALFLGRADEVVALLSKEFPELGLKKENCSEMTWFQSALWWDNRLNATQVDPKVFLDRN---LDTSSFGKRKSDYVATAIPKKGI 395 HSP 3 Score: 30.4166 bits (67), Expect = 2.112e-32 Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 529 WKTNSVPVPANVTVFRVHRMLDQNATN 609 +K VPVP+ VTVFRV + +D A + Sbjct: 250 YKVKLVPVPSVVTVFRVEQYMDSGAVD 276 HSP 4 Score: 25.7942 bits (55), Expect = 2.112e-32 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3 Query: 1335 NFFRHEQSIPPL 1370 NFFR+EQSIP L Sbjct: 525 NFFRNEQSIPTL 536 HSP 5 Score: 23.8682 bits (50), Expect = 2.112e-32 Identity = 8/11 (72.73%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 449 KSIGEDMFWAI 481 K++GED+FWAI Sbjct: 226 KAMGEDLFWAI 236
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.239e-29 Identity = 40/114 (35.09%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 1000 GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHK---GNYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 GG+M++I TP PHR+G ++ Y+V + E +F+ W+ +VY +M PF++K+PR Y+N+ DLD+G + N +R WG YF +N+ RL+ T + P Sbjct: 393 GGQMSKISSDFTPFPHRSGTRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDP 506 HSP 2 Score: 41.5874 bits (96), Expect = 4.239e-29 Identity = 29/68 (42.65%), Postives = 37/68 (54.41%), Query Frame = 3 Query: 780 FPQLGLMKEDCLEMSWAESDLYFEQFPIGAPLETLLG-RNHXXXXXXXXXXXXXDFVKQPIPEKQIHG 980 FP+LGL++ED LEMSW ES Y A LET+ N + FK K D K+P+P K +G Sbjct: 313 FPELGLVEEDYLEMSWGESFAYL------AGLETVSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYG 374 HSP 3 Score: 33.113 bits (74), Expect = 4.239e-29 Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 511 FGVVLAWKTNSVPVPANVTVFRVHR 585 +G + AWK +PVP VTVFRV + Sbjct: 228 WGAIYAWKIKLLPVPEKVTVFRVTK 252 HSP 4 Score: 26.9498 bits (58), Expect = 4.239e-29 Identity = 8/22 (36.36%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 599 TQLIHQWQYVAHKFPKEIHMSI 664 T L+H+WQ+VA + ++ +S+ Sbjct: 260 TSLLHKWQFVAEELEEDFTLSV 281 HSP 5 Score: 23.483 bits (49), Expect = 4.239e-29 Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3 Query: 1332 QNFFRHEQSIPPL 1370 N F H QSIPP+ Sbjct: 507 NNVFNHPQSIPPM 519
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: THCAI_CANSA (Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.424e-26 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 1000 GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFN-NHKGNYAQARIWGLKYFKNNFNRLVHITTKLGP 1332 GG M+EI E+ P PHRAG ++ + Y E++E+ +EK ++W+R VYN+ TP+++++PR Y+NYRDLD+G K N NY QARIWG KYF NFNRLV + TK P Sbjct: 420 GGIMDEISESAIPFPHRAGIMYELWYTATWEKQED--NEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLG--KTNPESPNNYTQARIWGEKYFGKNFNRLVKVKTKADP 527 HSP 2 Score: 29.261 bits (64), Expect = 6.424e-26 Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 1332 QNFFRHEQSIPPL 1370 NFFR+EQSIPPL Sbjct: 528 NNFFRNEQSIPPL 540 HSP 3 Score: 62.7734 bits (151), Expect = 2.389e-13 Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 3 Query: 672 ERVKSSKDEDKMTIQARFSSMFLGGTDKLLQLMEEKFPQLGLMKEDCLEMSWAESDLYFE 851 + + ++K T+ FSS+FLGG D L+ LM + FP+LG+ K DC E+SW ++ +++ Sbjct: 296 RNITDNHGKNKTTVHGYFSSIFLGGVDSLVDLMNKSFPELGIKKTDCKELSWIDTTIFYS 355 HSP 4 Score: 35.4242 bits (80), Expect = 2.389e-13 Identity = 25/87 (28.74%), Postives = 42/87 (48.28%), Query Frame = 2 Query: 449 KSIGEDMFWAIRXXXXXXXXALG*S*LGKQTRCQFQLMSPFSEFTECWIK--------TQLIHQWQYVAHKFPKEIHMSIHMRKGEI 685 KS+GED+FWAIR G G + +L+ S+ T +K +L ++WQ +A+K+ K++ ++ H R I Sbjct: 220 KSMGEDLFWAIR--------GGGGENFGIIAAWKIKLVVVPSKATIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLMLTTHFRTRNI 298
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: PHI_MYCGS (3-hexulose-6-phosphate isomerase OS=Mycobacterium gastri GN=rmpB PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.113e-20 Identity = 66/196 (33.67%), Postives = 98/196 (50.00%), Query Frame = -2 Query: 1421 NGSMASLASQICNDIASIFSKPSIHPPALD-LMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 2005 +G++ + I N+++ + + + +D VA LA + Q GRVF+ G GR GL+L+ MRL H GL+ H D TTP I++ DLL+ ++G G S V A+ G R+ T P++ + VV AAQ D G SR GS++E +FV+ E V L + E + RH NLE Sbjct: 8 DGAVKVVGDDITNNLSLVRDEVADTAAKVDPEQVAVLARQIVQPGRVFVAGAGRSGLVLRMAAMRLMHFGLTVHVAGDTTTPAISAGDLLLVASGSGTTSGVVKSAETAKKAGARIAAFTTNPDSPLAGLADAVVIIPAAQKT--DHGSHISRQY--AGSLFEQVLFVVTEAVFQSLWDHTEVEAEELWTRHANLE 199
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: PHI_BACSU (3-hexulose-6-phosphate isomerase OS=Bacillus subtilis (strain 168) GN=hxlB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.586e-19 Identity = 53/161 (32.92%), Postives = 85/161 (52.80%), Query Frame = -2 Query: 1421 ELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1903 +LA + ++F G GR GLM K+ MRL H+G +AH V ++ TPP+ DL++ +G G ++ + A+S G V LT PE+ S + A+++ + G K T+ PMGS++E + + ++ V+ KL E G E + H NLE Sbjct: 28 QLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPES-SIGKQADLIIRMPGSPKDQSNGSYK--TIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHHANLE 185
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 4.404e-17 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 1000 GGKMNEIPETETPHPHRAGNIFVILYMVDLEEKENINSEKFMSWMRRVYNYMTPFITKSPREIYINYRDLDIGVNKFNNHKGNYAQ---ARIWGLKYFKNNFNRLVHITTKLGP 1332 GGKM+EI TP PHR G + Y++ + E +F W+ + Y+Y+ PF++K PR Y+N+ DLDIG + N AR WG +YF +N+ RLV T + P Sbjct: 397 GGKMSEISTDFTPFPHRKGTKLMFEYIIAWNQDEESKIGEFSEWLAKFYDYLEPFVSKEPRVGYVNHIDLDIGGIDWRNKSSTTNAVEIARNWGERYFSSNYERLVKAKTLIDP 510 HSP 2 Score: 25.0238 bits (53), Expect = 4.404e-17 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 3 Query: 1332 QNFFRHEQSIPPLL 1373 N F H QSIPP++ Sbjct: 511 NNVFNHPQSIPPMM 524
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: K4BF72_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g025990.1 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.916e-87 Identity = 139/193 (72.02%), Postives = 163/193 (84.46%), Query Frame = -2 Query: 1421 ASLASQICNDIASIFSKPSIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADD--GGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1993 A LAS+IC+ I+S+FS S +P ALD++V E+A ++ GRVF+YGVGREGLMLKAL MRL HLGLS+H VFDM TPPI DLL+ASAGPGGFSTVDAI VA+S G RVLLLTAQP +GSS+++A+VVAY+ AQTMADD G GEK R LLPMGSVYEGAMFVLFEMVV+KLGE+L +SPEA+RARHTNLE Sbjct: 11 ALLASKICDQISSVFSTNSPNPAALDVLVQEIADAANRNGRVFVYGVGREGLMLKALSMRLFHLGLSSHCVFDMNTPPIGPSDLLIASAGPGGFSTVDAISGVAKSSGARVLLLTAQPHSGSSMKYASVVAYIPAQTMADDDAGDGEKERPLLPMGSVYEGAMFVLFEMVVFKLGEILKQSPEAVRARHTNLE 203
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A078H708_BRANA (BnaC03g15610D protein OS=Brassica napus GN=BnaC03g15610D PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.014e-86 Identity = 143/196 (72.96%), Postives = 162/196 (82.65%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGG--EK-SRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 M+ L+SQICN I+S+FS P+ HPP LDL+V ELA + RVFL+GVGREGLMLKA MRL HLGLS+H V DMTTPPI+S DLL+ASAGPGGFSTVDAICSVA++ G +V+L+TAQPETGS V+HA V YV AQTMA DGGG EK R LLPMGSVYEGA+FVLFEMVVYKLGEVLGESPE+ R RHTNLE Sbjct: 9 MSRLSSQICNQISSVFSNPTDPHPPPLDLLVTELAGVSRRGARVFLHGVGREGLMLKAFAMRLFHLGLSSHLVSDMTTPPISSPDLLIASAGPGGFSTVDAICSVAKAAGAKVVLITAQPETGSCVKHATDVCYVPAQTMASDGGGATEKGERPLLPMGSVYEGALFVLFEMVVYKLGEVLGESPESKRCRHTNLE 204
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A0D3B3V2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.320e-86 Identity = 142/196 (72.45%), Postives = 161/196 (82.14%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGG--EK-SRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 M+ L+SQICN I+S+FS P+ HPP LDL+V ELA + RVFL+GVGREGLMLKA MRL HLGLS+H V DMTTPPI+S D L+ASAGPGGFSTVDAICSVA++ G +V+L+TAQPETGS V+HA V YV AQTMA DG G EK R LLPMGSVYEGA+FVLFEMVVYKLGEVLGESPE+IR RHTNLE Sbjct: 9 MSRLSSQICNQISSVFSNPTDPHPPPLDLLVTELAGVSRRGARVFLHGVGREGLMLKAFAMRLFHLGLSSHLVSDMTTPPISSPDFLIASAGPGGFSTVDAICSVAKAAGAKVVLITAQPETGSCVKHATDVCYVPAQTMASDGEGATEKGERPLLPMGSVYEGALFVLFEMVVYKLGEVLGESPESIRCRHTNLE 204
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A068URB4_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_48 OS=Coffea canephora GN=GSCOC_T00031754001 PE=4 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 9.352e-86 Identity = 138/195 (70.77%), Postives = 166/195 (85.13%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPSIHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSS-VRHANVVAYVAAQTMADD--GGGEKSRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 +++LASQICN I+S+F++P P AL+++V E+A+T G++F+YGVGREGLMLKALCMRL HLGLSAH VFDMTTPPI S DLL+ASAGPGGFSTVDAIC VARS+G RV+LLTAQPE+ SS V+HA+VVA++ AQTMADD KS+ LLPMGS+YEGAMFVLFEMVV+KL EVLG+S E IRARHTNL+ Sbjct: 7 VSTLASQICNQISSVFNQPISGPTALEVIVEEVAATAKGNGQIFVYGVGREGLMLKALCMRLFHLGLSAHCVFDMTTPPIASPDLLIASAGPGGFSTVDAICEVARSNGARVVLLTAQPESKSSCVKHASVVAHIPAQTMADDEVAADPKSKPLLPMGSLYEGAMFVLFEMVVFKLAEVLGQSSEVIRARHTNLD 201
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Match: A0A087GAC7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G299200 PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 9.375e-86 Identity = 139/194 (71.65%), Postives = 156/194 (80.41%), Query Frame = -2 Query: 1421 MASLASQICNDIASIFSKPS-IHPPALDLMVAELASTVSQKGRVFLYGVGREGLMLKALCMRLAHLGLSAHFVFDMTTPPITSKDLLVASAGPGGFSTVDAICSVARSHGGRVLLLTAQPETGSSVRHANVVAYVAAQTMADDGGGEK-SRTLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPEAIRARHTNLE 1996 M L+SQICN I ++F+ P+ HPP LD++V ELA + VFL+GVGREGLMLKA MRL HLGLS H V DMTTPPI+ DLL+ASAGPGGFSTVDAICSVA+S G RVLLLTAQPE+GS V+HA V YV AQTMA D EK R LLPMGSVYEGAMFVLFEMVVYKLGEVLGESPE++R+RHTNLE Sbjct: 9 MEKLSSQICNQICAVFANPTNPHPPPLDILVTELAGVSRRSSCVFLHGVGREGLMLKAFAMRLFHLGLSTHLVSDMTTPPISPSDLLIASAGPGGFSTVDAICSVAKSSGARVLLLTAQPESGSCVKHATAVCYVPAQTMASDEAEEKGERRLLPMGSVYEGAMFVLFEMVVYKLGEVLGESPESVRSRHTNLE 202 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 15
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BLAST of g.barbadense_cottongen_reftransV1_0093436 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093436 ID=g.barbadense_cottongen_reftransV1_0093436; Name=g.barbadense_cottongen_reftransV1_0093436; organism=Gossypium barbadense; type=contig; length=2132bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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