g.barbadense_cottongen_reftransV1_0093427, g.barbadense_cottongen_reftransV1_0093427 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0093427
Unique Name	g.barbadense_cottongen_reftransV1_0093427
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	1954

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.335e-29
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 2

Query:  341 QKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            Q    L  G +F  W+ LNV+FNI NKK+ N FPYP+  S + L  G +  L+SWA  +      D    K L PVAV H +GHV + VS + VAVSFTH IK+ EP F+   S+F +G++ PL ++LSL P++ G
Sbjct:   90 QSAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVYLSLLPIIGG 225

HSP 2 Score: 68.1662 bits (165), Expect = 8.289e-11
Identity = 33/84 (39.29%), Postives = 58/84 (69.05%), Query Frame = 3

Query: 1203 NVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWV---GMFYHLYNQLATNTLERVAPLTHAVGNVLKR 1445
            N YA +S+++L +  P +I  EGPQ+   G+ +A+++VG   F+   +WV    +FYHLYNQ++  +L++++PLT ++GN +KR
Sbjct:  271 NYYACLSMMSLVILTPFSIAVEGPQMWAAGWQNAVSQVG-PNFV---WWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKR 350

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: XPT_ARATH (Xylulose 5-phosphate/phosphate translocator, chloroplastic OS=Arabidopsis thaliana GN=XPT PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.469e-25
Identity = 61/149 (40.94%), Postives = 89/149 (59.73%), Query Frame = 2

Query:  353 ALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIGDFSILCSVISFELAQVS 799
             L  G  F +WYF N++FNI NKK  N FPYP+ ++   LF G ++ L+ W+  L     I    +  L+  A+ H +GH+++ VSF+ VAVSFTH IK+ EP F+   S  +LG S PL +WLS+ P+V+G      + +SF L  +S
Sbjct:  109 TLQLGIVFGLWYFQNIVFNIFNKKALNVFPYPWLLASFQLFAGSIWMLVLWSFKLYPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSS-LLGDSYPLAVWLSILPIVMGCSLAAVTEVSFNLGGLS 256

HSP 2 Score: 75.485 bits (184), Expect = 4.056e-13
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 3

Query: 1188 DMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWV---GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKI 1490
            ++D  N+Y  ISI++L    P AI  EG   +  G+  AIA VG     +  FWV   G+FYHLYNQ +   L+ ++PLT +VGN +KRV VI  ++L F N +
Sbjct:  281 EIDGLNLYGCISILSLLYLFPVAIFVEGSHWVP-GYHKAIASVGTPS--TFYFWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIISTVLVFRNPV 381

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: PPT2_ORYSJ (Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.159e-23
Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLW--LSLAPVVIG 748
            G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V  L  W  G+ +R  I    L  ++P+AV H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG+ +P T+W  LSL P+V G
Sbjct:  108 GALFGLWYLFNIYFNIYNKQVLKVFPYPINITTVQFAVGTVVALFMWITGILRRPKISGAQLFAILPLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE-LP-TVWVILSLLPIVGG 235

HSP 2 Score: 60.4622 bits (145), Expect = 2.209e-8
Identity = 43/139 (30.94%), Postives = 81/139 (58.27%), Query Frame = 3

Query: 1164 RFFVYMQTDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISXXXXXXXXXXXXXVAMYSFIKARMEEEKR 1580
            +  V  +  +D+ N+++ I++++ F+  P A + EG ++       A   + + + ++      + +H Y Q++   L RV+P+TH+VGN +KRV VI  S+L F   +S    +GTAIA+AGV +YS +K R++ + +
Sbjct:  270 KLMVKKEESLDNINLFSIITVMSFFLLAPVAFLTEGIKITPTVLQSA--GLNVKQVLTRSLLAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVTSVLFFRTPVSPINSLGTAIALAGVFLYSQLK-RLKPKPK 405

HSP 3 Score: 56.225 bits (134), Expect = 5.186e-7
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1

Query:  922 AGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVTFFETL 1059
             GV++ASLTE SFNW GF SAM SN++F  R++ SKK MV   E+L
Sbjct:  234 GGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESL 279

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: PPT1_ORYSJ (Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.389e-23
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            G  F +WY  N+ FNI NK++   FPYP  ++ +   VG V  L  W  G+ KR  I    L  ++P+A+ H +G++ +N+S   VAVSFTHTIKA+EPFF+   S   LG+     + LSL P+V G
Sbjct:  109 GALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQFAVGTVIALFMWITGILKRPKISGAQLAAILPLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFVVLSLVPIVGG 236

HSP 2 Score: 56.225 bits (134), Expect = 5.480e-7
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1

Query:  922 AGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMVTFFETL 1059
             GV++ASLTE SFNW GF SAM SN++F  R++ SKK MV   E+L
Sbjct:  235 GGVALASLTEASFNWAGFWSAMASNVTFQSRNVLSKKLMVKKEESL 280

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.772e-21
Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWL--SLAPVVIGDFSILCSVISFELA 790
            G  F MWY  N+ FNI NK++      P  V+++   VG V     WA+ L KR  I +  L  ++P+AV H LG++ +N+S   V+VSFTHTIKA+EPFF+   S   LG+ +P T W+  S+ P+V G      + +SF  A
Sbjct:  103 GLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVVLSAMFLGE-VP-TPWVIGSIIPIVGGVALASVTEVSFNWA 244

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: PPT1_ARATH (Phosphoenolpyruvate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=PPT1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.166e-21
Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWL--SLAPVVIGDFSILCSVISFELAQVS 799
            G  F MWY  N+ FNI NK++      P  V+++   VG V   I W + L KR  I    L  ++P+AV H LG++ +N+S   V+VSFTHTIKA+EPFF+   S   LG+    T W+  ++ P+V G      S +SF  A  S
Sbjct:  109 GLLFAMWYLFNIYFNIYNKQVLKALHAPMTVTLVQFAVGSVLITIMWVLNLYKRPKISGAQLAAILPLAVVHTLGNLFTNMSLGKVSVSFTHTIKAMEPFFSVLLSAMFLGEKP--TPWVLGAIVPIVGGVALASISEVSFNWAGFS 253

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: PPT2_ARATH (Phosphoenolpyruvate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=PPT2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.698e-20
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 2

Query:  353 ALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
             L  G  F +WY LN+ +NI NK++   +PYP  V+   L  G +   I W + L  R     +   +++ +AV H LG++ +NVS   V VSFTHTIKA+EPFF    S  +LG+   L +  SL P+V G
Sbjct:   76 GLKLGGMFGVWYLLNIYYNIFNKQVLRVYPYPATVTAFQLGCGTLMIAIMWLLKLHPRPKFSPSQFTVIVQLAVAHTLGNLLTNVSLGRVNVSFTHTIKAMEPFFTVLLSVLLLGEWPSLWIVCSLLPIVAG 207

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: PPT3_ORYSJ (Phosphoenolpyruvate/phosphate translocator 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PPT3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.000e-19
Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            G     WY LN+ FNI NK++    P+PY ++   L  G     + WA+ L     I  + L  + P+A  H LG V +N+S + VAVSFTHTIKA EPFF    S F LG++  L +  SL P+V G
Sbjct:   96 GAMIVAWYLLNIYFNIYNKQVLQPLPFPYTITAFQLAFGSFVIFLMWALKLHPAPRISISQLAKIAPLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPSLLVLGSLVPIVGG 223

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: S35E1_DROME (Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.065e-10
Identity = 40/138 (28.99%), Postives = 71/138 (51.45%), Query Frame = 2

Query:  383 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYC---LISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIGDFSILCSVISFEL 787
            WY ++   N++ K + N FP+P  V+++ L    +Y       W +   +  P      +L++P+A+   L  VTS++S   V VS+ HT+KA  P F    ++   G+  P  ++LSL P++ G      + ISF++
Sbjct:   21 WYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLWRIRKYQDIP-RPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDM 157

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Match: GPTP1_ARATH (Glucose-6-phosphate/phosphate-translocator-like protein 1 OS=Arabidopsis thaliana GN=At4g03950 PE=3 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 1.297e-8
Identity = 34/93 (36.56%), Postives = 47/93 (50.54%), Query Frame = 2

Query:  365 GFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 643
            G +F +W+ LN +FN  NKK+ N FPY +    + L  G +  L+SW                    VA+ H +GHV + VS + V VSFTHT
Sbjct:   19 GIYFAIWWALNGVFNNYNKKVLNAFPYLWLTLTLSLACGSLMMLVSW--------------------VALAHTIGHVEAIVSMSKVVVSFTHT 91

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Match: A0A067GDG1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013023mg PE=4 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 3.018e-109
Identity = 187/241 (77.59%), Postives = 203/241 (84.23%), Query Frame = 2

Query:   47 MESRLLSRASTIAG-LPQIRPKLSRDSLSVSFASAKPIGAVGEGGNVIWGRQLRPSLLLESS------LANKREILKPVLXXXXXXXXXXXXXXXXXEIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            MESR+LSRA+T    +  +R     +  +VSF S KPIGAVGEGGNVIWGRQLRP+LLLESS       A K+EIL+P+LA+ASS A G   +    E APV FF +YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SWAVGLPKRAPIDS LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVVIG
Sbjct:    1 MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAG---EAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238

HSP 2 Score: 128.257 bits (321), Expect = 6.001e-29
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 3

Query: 1185 TDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLA 1385
            TDMDSTN+YAYISIIALFVCIPPAII EGPQL+K+G +DAI+KVGM KFISDLFWVGMFYHLYNQ+ 
Sbjct:  276 TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342

HSP 3 Score: 77.0258 bits (188), Expect = 6.025e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1

Query:  925 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 1038
            GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct:  238 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Match: A0A067GQY7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013023mg PE=4 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 4.706e-109
Identity = 187/241 (77.59%), Postives = 203/241 (84.23%), Query Frame = 2

Query:   47 MESRLLSRASTIAG-LPQIRPKLSRDSLSVSFASAKPIGAVGEGGNVIWGRQLRPSLLLESS------LANKREILKPVLXXXXXXXXXXXXXXXXXEIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            MESR+LSRA+T    +  +R     +  +VSF S KPIGAVGEGGNVIWGRQLRP+LLLESS       A K+EIL+P+LA+ASS A G   +    E APV FF +YPALVTGFFFFMWYFLNVIFNILNK+IYNYFPYPYFVSVIHL VGVVYCL+SWAVGLPKRAPIDS LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQ +PLTLWLSLAPVVIG
Sbjct:    1 MESRVLSRATTTTTTISSLRRSPLENHQNVSFISLKPIGAVGEGGNVIWGRQLRPALLLESSNAPAGLFAGKKEILRPILATASSPAEGSDSAG---EAAPVRFFDRYPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIG 238

HSP 2 Score: 224.942 bits (572), Expect = 1.595e-62
Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 3

Query: 1185 TDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISXXXXXXXXXXXXXVAMYSFIKARMEEEKR 1580
            TDMDSTN+YAYISIIALFVCIPPAII EGPQL+K+G +DAI+KVGM KFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGT IAIAGVA YS+IKA+MEEEKR
Sbjct:  276 TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKR 407

HSP 3 Score: 77.411 bits (189), Expect = 7.994e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1

Query:  925 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 1038
            GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct:  238 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Match: A0A0A0KLJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G518130 PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 4.912e-106
Identity = 188/241 (78.01%), Postives = 208/241 (86.31%), Query Frame = 2

Query:   47 MESRLLSRASTIAG-LPQIRPKLSRDSLS----VSFASAKPIGAVGEGGNVIWGRQLRPSLLLESS--LANKREILKPVLXXXXXXXXXXXXXXXXXEIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            MES  LSRA++ AG +P +R KL RD  S    V+F   +PI    EG N+IWGRQLRPSLLL++   ++ KR+ ++P  A+ASS+  GGSDSAGDA++APVGFF+KYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHL VGVVYCLISWAVGLPKRAPIDS LLKLLIPVA CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIP+TLWLSLAPVVIG
Sbjct:    1 MESHFLSRATSFAGAIPTLR-KLHRDVTSNSNHVAFVHTRPIA---EGANLIWGRQLRPSLLLDTPHLVSGKRDTIRPTFAAASSSPAGGSDSAGDAKVAPVGFFEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLVVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIG 237

HSP 2 Score: 223.016 bits (567), Expect = 5.122e-62
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 3

Query: 1185 TDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISXXXXXXXXXXXXXVAMYSFIKARMEEEKRQMKAA 1595
            TDMDSTNVYAYISIIAL  CIPPA+I EGPQL+K+GF DAIAKVG+TKF+ DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQTGIGT IAIAGVA+YS+IKA+MEEEKR+ K A
Sbjct:  275 TDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVLDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTCIAIAGVALYSYIKAKMEEEKRRTKVA 411

HSP 3 Score: 77.411 bits (189), Expect = 8.233e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 1

Query:  925 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 1038
            GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM
Sbjct:  237 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 274

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Match: I1KLP7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 3.906e-105
Identity = 178/236 (75.42%), Postives = 195/236 (82.63%), Query Frame = 2

Query:   47 MESRLLSRASTIAGLPQIRPKLSRDSLSVSFASAKPIGAVGEGGNVIWGRQLRPSLLLESSLANKRE--ILKPVLXXXXXXXXXXXXXXXXXEIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            MESR+LSRA T++ LP +R        S S  + K +G+V +GGN+IWGRQLRP L    S   KRE  +L+P LA+ASS A G   +    ++AP GFF KYPALVTGFFFF WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGV YCL+SWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIP+TLWLSLAPVVIG
Sbjct:    1 MESRVLSRAGTLSSLPHLRKPPREAVSSASLVAVKAVGSVADGGNLIWGRQLRPEL---CSPVLKREAVLLRPCLAAASSPAEGSDSAGEA-KVAPAGFFDKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIG 232

HSP 2 Score: 228.024 bits (580), Expect = 8.471e-64
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 3

Query: 1185 TDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISXXXXXXXXXXXXXVAMYSFIKARMEEEKRQMKAA 1595
            TDMDSTN+YAYISIIAL VCIPPA+I EGP L+K GF DAIAKVG+ KF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQTGIGTAIAIAGVA+YSFIKARMEEEKRQ KAA
Sbjct:  270 TDMDSTNIYAYISIIALIVCIPPAVILEGPTLLKNGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSFIKARMEEEKRQAKAA 406

HSP 3 Score: 75.8702 bits (185), Expect = 2.401e-11
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1

Query:  925 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 1038
            GVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct:  232 GVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAM 269

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Match: I1M068_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.634e-104
Identity = 177/235 (75.32%), Postives = 197/235 (83.83%), Query Frame = 2

Query:   47 MESRLLSRASTIAGLPQIRPKLSRD-SLSVSFASAKPIGAVGEGGNVIWGRQLRPSLLLESSLANKREILKPVLXXXXXXXXXXXXXXXXXEIAPVGFFQKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPLTLWLSLAPVVIG 748
            MESR+LSRA T+  LP +R KL R+     S  + K +G+V +GGN+IWGRQLRP L    +L  +  +L+P LA+ASS A G   +    ++AP GFF+KYPALVTGFFFF WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGV YCL+SWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIP+TLWLSLAPVVIG
Sbjct:    1 MESRVLSRAGTLFSLPHLR-KLPREVGAGPSLVAVKAVGSVADGGNLIWGRQLRPELC-SPALKKEAVLLRPCLAAASSPAEGSDSAGEA-KVAPAGFFEKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVAYCLVSWAVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIG 232

HSP 2 Score: 229.18 bits (583), Expect = 2.766e-64
Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 3

Query: 1185 TDMDSTNVYAYISIIALFVCIPPAIIFEGPQLMKYGFTDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISXXXXXXXXXXXXXVAMYSFIKARMEEEKRQMKAA 1595
            TDMDSTN+YAYISIIAL VCIPPA+I EGP L+K+GF DAIAKVG+ KF+SDLFWVGMFYHLYNQ+ATNTLERVAPLTHAVGNVLKRVFVIGFSI+ FGNKISTQTGIGTAIAIAGVA+YSFIKARMEEEKRQ KAA
Sbjct:  270 TDMDSTNIYAYISIIALIVCIPPAVILEGPTLLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSFIKARMEEEKRQAKAA 406

HSP 3 Score: 75.8702 bits (185), Expect = 2.379e-11
Identity = 37/38 (97.37%), Postives = 37/38 (97.37%), Query Frame = 1

Query:  925 GVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 1038
            GVSMASLTELSFNW GFISAMISNISFTYRSIYSKKAM
Sbjct:  232 GVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAM 269

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 20


Match Name	E-value	Identity	Description
GPT2_ARATH	6.335e-29	44.85	Glucose-6-phosphate/phosphate translocator 2, chlo...	[more]
XPT_ARATH	2.469e-25	40.94	Xylulose 5-phosphate/phosphate translocator, chlor...	[more]
PPT2_ORYSJ	1.159e-23	43.85	Phosphoenolpyruvate/phosphate translocator 2, chlo...	[more]
PPT1_ORYSJ	1.389e-23	42.19	Phosphoenolpyruvate/phosphate translocator 1, chlo...	[more]
TPT2_BRAOB	2.772e-21	40.28	Triose phosphate/phosphate translocator, non-green...	[more]
PPT1_ARATH	8.166e-21	39.46	Phosphoenolpyruvate/phosphate translocator 1, chlo...	[more]
PPT2_ARATH	2.698e-20	39.39	Phosphoenolpyruvate/phosphate translocator 2, chlo...	[more]
PPT3_ORYSJ	1.000e-19	41.41	Phosphoenolpyruvate/phosphate translocator 3, chlo...	[more]
S35E1_DROME	3.065e-10	28.99	Solute carrier family 35 member E1 homolog OS=Dros...	[more]
GPTP1_ARATH	1.297e-8	36.56	Glucose-6-phosphate/phosphate-translocator-like pr...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0093427 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A067GDG1_CITSI	3.018e-109	77.59	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067GQY7_CITSI	4.706e-109	77.59	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A0A0KLJ5_CUCSA	4.912e-106	78.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]
I1KLP7_SOYBN	3.906e-105	75.42	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
I1M068_SOYBN	2.634e-104	75.32	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004853	Sugar phosphate transporter domain	PFAM	PF03151	TPT	coord: 105..246 e-value: 2.2E-48 score: 165.0
None	No IPR available	PANTHER	PTHR11132:SF102	SUBFAMILY NOT NAMED	coord: 63..234
None	No IPR available	PANTHER	PTHR11132	SOLUTE CARRIER FAMILY 35	coord: 63..234
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 124..134
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 159..169
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 170..196
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 135..158
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 249..254
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 101..123
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..100
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 224..248
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 197..223
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 147..234
None	No IPR available	TMHMM	TMhelix		coord: 101..123
None	No IPR available	TMHMM	TMhelix		coord: 172..194
None	No IPR available	TMHMM	TMhelix		coord: 135..157

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0093427 ID=g.barbadense_cottongen_reftransV1_0093427; Name=g.barbadense_cottongen_reftransV1_0093427; organism=Gossypium barbadense; type=contig; length=1954bp
TTATCTAAGAGTATAGCCATTTGATTCTCTCCTCCTCTCAGTAACAATGG
AGTCGCGGTTGTTGTCACGCGCTTCCACCATTGCCGGCTTGCCTCAGATC
AGGCCGAAGCTTTCGCGAGACTCTCTCAGTGTTTCGTTTGCTTCGGCTAA
GCCTATCGGAGCCGTCGGAGAAGGCGGGAACGTGATATGGGGGAGACAGC
TAAGGCCGTCGCTGTTGCTCGAGAGCTCGCTGGCCAATAAACGGGAGATT
TTGAAGCCGGTTCTAGCTTCCGCGTCGTCGGCGGCCGGGGGAGGAAGCGA
TTCCGCCGGGGACGCTGAGATCGCTCCGGTTGGATTCTTCCAAAAGTATC
CCGCTCTTGTTACTGGCTTCTTCTTCTTCATGTGGTACTTCTTAAATGTA
ATCTTTAACATTCTCAACAAGAAGATCTACAATTACTTCCCTTATCCCTA
TTTTGTGTCAGTTATTCACTTGTTCGTTGGGGTGGTATATTGTTTGATCA
GCTGGGCCGTTGGCCTCCCTAAGCGAGCTCCTATTGATTCAAACCTACTG
AAGTTGTTGATCCCTGTTGCCGTATGCCATGCATTGGGCCATGTAACTAG
CAATGTCTCCTTTGCAGCTGTTGCTGTGTCTTTCACCCACACAATCAAAG
CTCTTGAGCCTTTCTTCAATGCTGCTGCTTCCCAATTCATACTTGGACAA
TCCATTCCATTAACTCTATGGCTGTCTCTTGCTCCTGTTGTTATTGGTGA
TTTCTCTATTCTTTGTTCGGTCATCTCATTTGAATTGGCTCAAGTATCAA
TTGTGCTCTAGCTCTAATTGTGTAGATAAACAAACTCTAGAACTCTATTA
CGAGATTGGCAATTTGCACTTGAATTGTTAACGTGTCTCCATGTTTGGGT
ATCATTTAACCCAAAATGCATGCAGGTGTATCGATGGCATCACTGACTGA
GCTGTCGTTCAATTGGACGGGTTTCATTAGTGCAATGATTTCTAACATTT
CATTCACTTACAGGAGTATCTATTCCAAGAAAGCTATGGTGACTTTCTTT
GAAACTCTTCGCAGTTCCTTTTTGAAAGAATCAAACAGAGCCCCTTTCTT
CCTCCTCCTCACTTCCTTTATATTTTTGACCCTCTATTGTGATAAGCATT
TTATGATATTTGTCGGTTTTTCGTATATATGCAGACCGATATGGACAGTA
CAAATGTCTACGCTTATATTTCCATCATTGCGCTCTTCGTCTGTATTCCT
CCGGCCATCATTTTCGAGGGCCCTCAATTAATGAAGTATGGTTTCACTGA
TGCTATTGCTAAAGTTGGTATGACTAAATTCATCTCGGATCTCTTTTGGG
TGGGTATGTTTTACCATCTCTACAATCAGTTGGCTACCAACACACTAGAG
CGGGTGGCACCACTCACTCATGCAGTTGGCAATGTGCTGAAACGTGTGTT
TGTCATTGGCTTCTCAATCCTGGCCTTTGGAAACAAGATTTCAACGCAGA
CAGGTATTGGAACAGCCATAGCTATTGCTGGAGTGGCAATGTACTCTTTC
ATCAAGGCCAGGATGGAAGAAGAGAAACGACAAATGAAAGCAGCATGAGA
AGAAAAGAGGCAAGGAAATGGAGGAAGCAAAGGAAAGGGGGTGTAAAGTT
AGGTCTTTCCTCATGAAGATTTAAAAGAAAAAATTTAAAGAAAAAGATGA
CATTGAATATCCTGCTGCTGTTTTTGTTCAATTATAATAATTATTATTTC
CATCAATTTTCTTTTAATTAGTATCCCAAAACCATCGCTAATTTTCAAGC
AGTCAGTAGTGACTGAAAATAATGTATGATCACACCTACTTTCCTCTCTC
AGATTAAGCACTGTTTCCTTTAGAAGCTTTAATGAGTTGCATGAACCCGG
AAAATTCTACTCTACGTTTCACAAGAAAGCATATACCGAAATTTCTAATT
GAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR004853	Sugar_P_trans_dom

Search form

g.barbadense_cottongen_reftransV1_0093427, g.barbadense_cottongen_reftransV1_0093427 (contig) Gossypium barbadense

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