g.barbadense_cottongen_reftransV1_0093386, g.barbadense_cottongen_reftransV1_0093386 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0093386
Unique Name	g.barbadense_cottongen_reftransV1_0093386
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3359

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Dt11	chromosome	g.barbadense_cottongen_reftransV1_0093386:1..3341 . Dt11:56292192..56299497 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KD5BB_DANRE (Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 8.115e-54
Identity = 102/208 (49.04%), Postives = 134/208 (64.42%), Query Frame = 1

Query: 2740 ERFGFEPG-PEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    ++TL  F + AD FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP K  +  +A  +EKY+  GWNLNN   +  SVL + ++DI G+ +PWLYVGMCFSSFCWH+EDH  YS+N++HWG PK WYG PG  A +LE  MKK  P+LFD QPDLLH+LVT ++P
Sbjct:  352 EAFGFEQAHRDYTLKAFGEMADSFKSDYFN--------------MP-VHMVPTELVEKEFWRLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCGWNLNNMAMMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMKKLAPELFDSQPDLLHQLVTIMNP 544

HSP 2 Score: 58.151 bits (139), Expect = 5.467e-7
Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPP--CPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+ +EF+D   +I  IRP AEK GIC++ PP  W+PP  C +      +   F  R+QR+++L+ +  ++
Sbjct:   14 ECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKVRPPPDWQPPFACDV------DRLHFTPRIQRLNELEAQTRVK 83

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5B_MOUSE (Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.149e-53
Identity = 101/208 (48.56%), Postives = 137/208 (65.87%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    ++TL  F + AD FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP +  ++ ++   E+Y++SGWNLNN P +  SVL + ++DI G+ +PWLYVGMCFSSFCWH+EDH  YS+N++HWG PK WYGVPG  A +LE  MKK  P+LF  QPDLLH+LVT ++P
Sbjct:  366 EAFGFEQAARDYTLRTFGEMADAFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNP 558

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5A_HUMAN (Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 2.222e-53
Identity = 105/208 (50.48%), Postives = 135/208 (64.90%), Query Frame = 1

Query: 2740 ERFGFEPG-PEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVG-LASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD+FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP K  +   L   E+Y  SGWNLNN P L  SVL + + DISG+ VPWLYVGMCFSSFCWH+EDH  YS+N++HWG PK WYGVP   A +LEE M++  P+LF+ QPDLLH+LVT ++P
Sbjct:  350 EAFGFEQAVREYTLQSFGEMADNFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNP 542

HSP 2 Score: 67.0106 bits (162), Expect = 9.356e-10
Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+ +EF D L++I  IRP AEK GIC+I PP  W+PP   + K+     RF  RVQR+++L+    +R
Sbjct:   18 ECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPPFACEVKSF----RFTPRVQRLNELEAMTRVR 87

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5B_CHICK (Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.082e-53
Identity = 100/208 (48.08%), Postives = 136/208 (65.38%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    ++TL  F + AD FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP +  +  +    E+Y++SGWNLNN P +  SVL + ++DI G+ +PWLYVGMCFSSFCWH+EDH  YS+N++HWG PK WYG PG  A +LE+ MKK  P+LF+ QPDLLH+LVT ++P
Sbjct:  341 EAFGFEQAARDYTLRTFGEMADAFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNP 533

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5C_MOUSE (Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4)

HSP 1 Score: 206.838 bits (525), Expect = 8.859e-53
Identity = 106/208 (50.96%), Postives = 132/208 (63.46%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD FKA YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP   S+  L    E+Y  SGWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LEE MKK  P+LFD QPDLLH+LVT ++P
Sbjct:  381 EAFGFEQATREYTLQSFGEMADSFKADYFN--------------MP-VHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNP 573

HSP 2 Score: 69.707 bits (169), Expect = 1.406e-10
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+  EF D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  R+QR+++L+ +  ++
Sbjct:   13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5C_HUMAN (Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.023e-52
Identity = 106/208 (50.96%), Postives = 132/208 (63.46%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD FKA YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP   S+  L    E+Y  SGWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LEE MKK  P+LFD QPDLLH+LVT ++P
Sbjct:  381 EAFGFEQATREYTLQSFGEMADSFKADYFN--------------MP-VHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNP 573

HSP 2 Score: 69.707 bits (169), Expect = 1.611e-10
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+  EF D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  R+QR+++L+ +  ++
Sbjct:   13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5C_CANFA (Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.648e-52
Identity = 105/208 (50.48%), Postives = 132/208 (63.46%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD FKA YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP   ++  L    E+Y  SGWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LEE MKK  P+LFD QPDLLH+LVT ++P
Sbjct:  381 EAFGFEQATREYTLQSFGEMADSFKADYFN--------------MP-VHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNP 573

HSP 2 Score: 69.707 bits (169), Expect = 1.467e-10
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+  EF D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  R+QR+++L+ +  ++
Sbjct:   13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5D_PANTR (Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.650e-52
Identity = 105/208 (50.48%), Postives = 132/208 (63.46%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEK-YINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+    FGSGFP  +S+  L+  EK Y  SGWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LEE MK   P+LFD QPDLLH+LVT ++P
Sbjct:  371 EAFGFEQATQEYTLQSFGEMADSFKSDYFN--------------MP-VHMVPTELLEKEFWRLVSSIEEDVTVEYGADIHYKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLAQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLMNP 563

HSP 2 Score: 70.8626 bits (172), Expect = 7.186e-11
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+  EF+D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  R+QR+++L+ +  ++
Sbjct:   13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5D_HUMAN (Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.540e-52
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEK-YINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E++L  F + AD FK+ YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP  +S+  L+  EK Y  SGWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LEE MK   P+LFD QPDLLH+LVT ++P
Sbjct:  371 EAFGFEQATQEYSLQSFGEMADSFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLMNP 563

HSP 2 Score: 71.2478 bits (173), Expect = 5.213e-11
Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1

Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            + PVF P+  EF+D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  RVQR+++L+ +  ++
Sbjct:   13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRVQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5D_MOUSE (Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.705e-52
Identity = 104/208 (50.00%), Postives = 133/208 (63.94%), Query Frame = 1

Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEK-YINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            E FGFE    E+TL  F + AD FKA YF               +P +H    E +E E+WR+V    E++ V YGAD+ +  FGSGFP  +S+  L+  EK Y   GWNLN  P L  SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH  YS+N++HWG PK WYGVP   A  LE+ MK+  P+LFD QPDLLH+LVT ++P
Sbjct:  380 EAFGFEQATQEYTLQSFGEMADSFKADYFN--------------MP-VHMVPTEVVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQPDLLHQLVTLMNP 572

HSP 2 Score: 70.8626 bits (172), Expect = 7.323e-11
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1

Query: 2383 RPGVED------APVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619
            +PG +D       PVF P+  EF D L YIA IRP AEK GIC+I PP+ W+PP  ++     +N RF  R+QR+++L+ +  ++
Sbjct:    2 KPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2R0C8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1)

HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0
Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1

Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            C   +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP
Sbjct:  103 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 468

HSP 2 Score: 225.328 bits (573), Expect = 7.197e-57
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 2

Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
            MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ
Sbjct:    1 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 108

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2PFN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1)

HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0
Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1

Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            C   +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP
Sbjct:  103 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 468

HSP 2 Score: 225.713 bits (574), Expect = 2.577e-57
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 2

Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
            MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ
Sbjct:    1 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 108

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2R0D2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G276200 PE=4 SV=1)

HSP 1 Score: 718.768 bits (1854), Expect = 0.000e+0
Identity = 359/366 (98.09%), Postives = 361/366 (98.63%), Query Frame = 1

Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            C   +QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGS WSADA FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKV+VLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP
Sbjct:  118 CEKLDQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSMRRKRRRYMRMAVDCSSDSGSSWSADAGFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVSVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 483

HSP 2 Score: 232.261 bits (591), Expect = 5.054e-59
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 2

Query: 1730 LGCWDAELILN*AILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
            + C +  L+   AILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVA+PVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ
Sbjct:    1 MQCLNCHLLSCVAILMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVASPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 123

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A061F0P4_THECC (Transcription factor jumonji family protein / zinc finger family protein isoform 1 OS=Theobroma cacao GN=TCM_026189 PE=4 SV=1)

HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0
Identity = 320/367 (87.19%), Postives = 339/367 (92.37%), Query Frame = 1

Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWS-ADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            C   +QN RLR NLPKGVIRGCPECNDCQKV ARW PEEACRP +EDAPVFYPTE+EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RF TRVQRVDKLQNR+SMRKMSKVNN+MRRKRRR MRMAVDC SDSGSI   ADA FCEVERFGFEPGPEFTL+KFQKYADDFKAQY RR+EN VDMEG++T+L +  E SVENIEGEYWR+VEKATEEIEVLYGADLETGVFGSGFPKK SQV   SNEKYI SGWNLNNFPRLPGSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPGKDA KLEEAM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:  100 CGKLDQNLRLRLNLPKGVIRGCPECNDCQKVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNVWENSRFTTRVQRVDKLQNRDSMRKMSKVNNNMRRKRRRCMRMAVDCGSDSGSISGSADAGFCEVERFGFEPGPEFTLEKFQKYADDFKAQYLRRRENGVDMEGRMTILQEHPEPSVENIEGEYWRVVEKATEEIEVLYGADLETGVFGSGFPKKPSQVEFVSNEKYIKSGWNLNNFPRLPGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDASKLEEAMRKHLPDLFDEQPDLLHKLVTQLSP 466

HSP 2 Score: 156.762 bits (395), Expect = 2.271e-35
Identity = 81/108 (75.00%), Postives = 89/108 (82.41%), Query Frame = 2

Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
            MGTELMRVCVKEENDDIP VPPGFESYASFTL R AQ+  K E+DNV  CSA A+T  S  +PV+KETELGN  + KITRS+RRRPWINYGRYDNS E+E DC KLDQ
Sbjct:    1 MGTELMRVCVKEENDDIPSVPPGFESYASFTLKR-AQDTEKQESDNVMCCSAPAST--SETSPVKKETELGNRGNAKITRSLRRRPWINYGRYDNSSEEEPDCGKLDQ 105

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A061F2J5_THECC (Transcription factor jumonji family protein / zinc finger family protein isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_026189 PE=4 SV=1)

HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0
Identity = 296/367 (80.65%), Postives = 315/367 (85.83%), Query Frame = 1

Query: 2260 CHSFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDC-SSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            C   +QN RLR NLPKGVIRGCPECNDCQKV ARW PEEACRP +EDAPVFYPTE+EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RF TRVQRVDKLQNR+SMRKMSKVNN+MRRKRRR MRMAVDC S       SADA FCEVERFGFEPGPEFTL+KFQKYADDFKAQY RR+EN VDMEG++T+L +  E SVENIEGEYWR+VEKATEEIEVLYGADLETGVFGSGFPKK SQV                        VL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPGKDA KLEEAM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:    3 CGKLDQNLRLRLNLPKGVIRGCPECNDCQKVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNVWENSRFTTRVQRVDKLQNRDSMRKMSKVNNNMRRKRRRCMRMAVDCGSDSGSISGSADAGFCEVERFGFEPGPEFTLEKFQKYADDFKAQYLRRRENGVDMEGRMTILQEHPEPSVENIEGEYWRVVEKATEEIEVLYGADLETGVFGSGFPKKPSQVEF----------------------VLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDASKLEEAMRKHLPDLFDEQPDLLHKLVTQLSP 347

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2SGH6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1)

HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0
Identity = 282/344 (81.98%), Postives = 311/344 (90.41%), Query Frame = 1

Query: 2326 PECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            P+     +V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC  DSGSI  +DA   E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:   67 PDHGKLNQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 410

HSP 2 Score: 75.8702 bits (185), Expect = 1.426e-10
Identity = 48/110 (43.64%), Postives = 59/110 (53.64%), Query Frame = 2

Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSV--RRRPWINYGRYDNSPEDELDCEKLDQVS 2104
             EL+RVC++E+NDDI  VPP                                   S+ A  V+K T L N ES+KITRS+  RRRPWINYG+YDNS EDE D  KL+QV+
Sbjct:    1 MELVRVCLEEKNDDISSVPPA----------------------------------STRAILVEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQVT 76

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2VFL5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1)

HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 282/344 (81.98%), Postives = 311/344 (90.41%), Query Frame = 1

Query: 2326 PECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            P+     +V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC  DSGSI  +DA   E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:   96 PDHGKLNQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 439

HSP 2 Score: 119.783 bits (299), Expect = 5.675e-24
Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 2

Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITR--SVRRRPWINYGRYDNSPEDELDCEKLDQVS 2104
             EL+RVC++E+NDDI  VPPGFE  ASFTL   AQ+  +HE DN+  CSAS   I      V+K T L N ES+KITR  S+RRRPWINYG+YDNS EDE D  KL+QV+
Sbjct:    1 MELVRVCLEEKNDDISSVPPGFEPRASFTLKTEAQDTKRHERDNLICCSASTRAIL-----VEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQVT 105

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2U3J2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 281/338 (83.14%), Postives = 310/338 (91.72%), Query Frame = 1

Query: 2344 QKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            ++V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC  DSGSI  +DA   E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:    3 KQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 340

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A0D2W7D3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G187600 PE=4 SV=1)

HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0
Identity = 281/338 (83.14%), Postives = 310/338 (91.72%), Query Frame = 1

Query: 2344 QKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            ++V ARW PEEACRP +ED PVFYPT++EFEDTL YIASIRP+AE+YGICRIVPPSSWKPPCPLKEKN+WEN+RFATRVQRVDKLQNR+ MRKMS+ NN++RRKRRR MRMA+DC  DSGSI  +DA   E+E FGFE GPEFTLD+FQKYAD+FK QYFR KENDV+MEGK+T+L D HE S++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGF KK +QVGLAS+EKYI SGWNLNNFPRL GSVL+YESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+MH GAPKIWYGVPGKDA KLE+AM+KHLPDLFDEQPDLLHKLVTQLSP
Sbjct:  124 KQVTARWRPEEACRPDIEDVPVFYPTDEEFEDTLKYIASIRPRAEQYGICRIVPPSSWKPPCPLKEKNMWENSRFATRVQRVDKLQNRDPMRKMSEANNNIRRKRRRCMRMAIDCGPDSGSISESDAGLSELEGFGFEVGPEFTLDRFQKYADNFKTQYFRLKENDVNMEGKMTILQDHHEPSIQNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFHKKLNQVGLASDEKYIKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYMHLGAPKIWYGVPGKDASKLEKAMRKHLPDLFDEQPDLLHKLVTQLSP 461

HSP 2 Score: 117.472 bits (293), Expect = 2.394e-23
Identity = 64/108 (59.26%), Postives = 76/108 (70.37%), Query Frame = 2

Query: 1781 TELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITR--SVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
             EL+RVC++E+NDDI  VPPGFE  ASFTL   AQ+  +HE DN+  CSAS   I      V+K T L N ES+KITR  S+RRRPWINYG+YDNS EDE D  KL+Q
Sbjct:    1 MELVRVCLEEKNDDISSVPPGFEPRASFTLKTEAQDTKRHERDNLICCSASTRAIL-----VEKGTGLANDESSKITRSMSMRRRPWINYGQYDNSSEDEPDHGKLNQ 103

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A067DSI0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0443881mg PE=4 SV=1)

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 283/363 (77.96%), Postives = 311/363 (85.67%), Query Frame = 1

Query: 2275 QNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSI-WSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLH-EASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357
            QN   R  LPKGVIRGCP C+DCQKV ARW PE++CRP +EDAPVFYPTE+EF+DTL YIASIRPKAE YGICRIVPPSSWKPPCPLKEK IW+++ F TRVQRVDKLQNRNSMRK+S+++N  RRKRRR  RMAVDC SDSG++  S D    E ERFGFEPGP FTL+ FQKYAD FKAQYF R +ND    G  T + + H E  VENIEGEYWRIVEKATEEIEVLYGADLET VFGSGFPK  +QVG AS+E+YI SGWNLNNFPRLPGSVL+YES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGVPGKDA KLEEAM+KHL DLF+EQPDLLHKLVTQLSP
Sbjct:  104 QNFTARPCLPKGVIRGCPTCSDCQKVTARWRPEDSCRPDLEDAPVFYPTEEEFQDTLKYIASIRPKAEPYGICRIVPPSSWKPPCPLKEKPIWDSSTFVTRVQRVDKLQNRNSMRKVSRIHNHSRRKRRRSTRMAVDCGSDSGNVSASGDVGCYEDERFGFEPGPAFTLNTFQKYADLFKAQYFSRDKNDAKGLGANTAVLEEHWEPLVENIEGEYWRIVEKATEEIEVLYGADLETCVFGSGFPKTLNQVGSASDERYIKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDALKLEEAMRKHLHDLFEEQPDLLHKLVTQLSP 466

HSP 2 Score: 95.9005 bits (237), Expect = 5.763e-17
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 2

Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098
            MGTELMRVC+KEEND++P VPPGFES+ASFTL R  Q+  KH+ D     S SA+  +S +  V  ETE+   ++ K  R +RRRP INYG  D+S EDE D  KL Q
Sbjct:    1 MGTELMRVCIKEENDEVPSVPPGFESFASFTLKR-VQDTEKHDCD---ITSCSASASASESLSVHMETEVKVADAAKAARPLRRRPGINYGLLDHSSEDESDSGKLGQ 104

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
KD5BB_DANRE	8.115e-54	49.04	Lysine-specific demethylase 5B-B OS=Danio rerio GN...	[more]
KDM5B_MOUSE	1.149e-53	48.56	Lysine-specific demethylase 5B OS=Mus musculus GN=...	[more]
KDM5A_HUMAN	2.222e-53	50.48	Lysine-specific demethylase 5A OS=Homo sapiens GN=...	[more]
KDM5B_CHICK	5.082e-53	48.08	Lysine-specific demethylase 5B OS=Gallus gallus GN...	[more]
KDM5C_MOUSE	8.859e-53	50.96	Lysine-specific demethylase 5C OS=Mus musculus GN=...	[more]
KDM5C_HUMAN	1.023e-52	50.96	Lysine-specific demethylase 5C OS=Homo sapiens GN=...	[more]
KDM5C_CANFA	2.648e-52	50.48	Lysine-specific demethylase 5C OS=Canis familiaris...	[more]
KDM5D_PANTR	2.650e-52	50.48	Lysine-specific demethylase 5D OS=Pan troglodytes ...	[more]
KDM5D_HUMAN	3.540e-52	50.00	Lysine-specific demethylase 5D OS=Homo sapiens GN=...	[more]
KDM5D_MOUSE	4.705e-52	50.00	Lysine-specific demethylase 5D OS=Mus musculus GN=...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2R0C8_GOSRA	7.197e-57	98.09	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2PFN0_GOSRA	2.577e-57	98.09	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2R0D2_GOSRA	5.054e-59	98.09	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061F0P4_THECC	2.271e-35	87.19	Transcription factor jumonji family protein / zinc...	[more]
A0A061F2J5_THECC	0.000e+0	80.65	Transcription factor jumonji family protein / zinc...	[more]
A0A0D2SGH6_GOSRA	1.426e-10	81.98	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2VFL5_GOSRA	5.675e-24	81.98	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2U3J2_GOSRA	0.000e+0	83.14	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2W7D3_GOSRA	2.394e-23	83.14	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A067DSI0_CITSI	5.763e-17	77.96	Uncharacterized protein (Fragment) OS=Citrus sinen...	[more]

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Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0093386 ID=g.barbadense_cottongen_reftransV1_0093386; Name=g.barbadense_cottongen_reftransV1_0093386; organism=Gossypium barbadense; type=contig; length=3359bp
AGAAATTTAACCTTTTTTTATTAAAAAATTGAATTTTCAATTTATGAAAA
TCTGTTACTTCTTGAAGCGGTGAATTAATTAATCTTCCATATTTACCCTT
ATCATCTTCATTCTTTTCCTTGGAATTGTTCTGCGTTCAGATTTTATTTT
GCAGGTAGGGGTTTTGATGGTCATATTTGGATTTGTGGGGTACCCTTGTA
AAACAAGAAATTTTTGAAAAAAATATATTATTGGTTTTTATTTTATCAAA
AGAAAATAGTAACCTTTTTTTTTCCTCTGTTGATTTTGATTTTTCTTCTG
GTGTTAGGGTTAGGGTTAGGTTAGATCCGTTTAAAATCAGATTCAACTTT
TCAATTCGTTTCCACTTTATATTTTTCTAAAATTTTTATTATGGTTTTAA
ATTTAGAAAATTTTTTGTGATTTTTTTCTCCCTGAAAAATTGGTCTAGTC
AAAAGGAGTTATTTCAGCTGCTTAAGTGAAGTCAAATTATAGAAATCTTT
TGGATCATGTAAGCTCCATTTTTTTTAATTTATTTAATTTTTTAGATTTA
TTTTTAGGGAAATTTTTCTTGAATTCCTTTTTGTCTGATGATGAGTATAA
GATAGGAAACTAGAATTTTATGAGCTGTGTTTTATTTTATTTGTTCTGAA
AATTTTCTCGATCAAATTATTTTTTTGTGTTCTTTTAGGGTTTAGGACTG
CTTAATCAATTGGGAAAGTAATGCAGGACCTCGATCATGGATTTAGCTGG
ACATTTTTTTAGCATAAATTTTGTTTAGGTCTCCTGATTTGATTTTCTTT
ATATATATATCTAAAAAGAAAACTGGAAAATCTGTTTATGAGTTTGATTT
TCAATCTTATCTTTGCATATGAATTTCTGAAGGCTACAGTTGATGAGTTT
TATTGATGAAAAATTTTCTGATCCAAGAAGGGTCTGCATGGTGTTATTTT
CCTGTTATGTAGAAATATTATTTTCAGAAATTTTGATTGCAAGGTTACAT
ATTTGAAGGATCATGATTTTGAAGGTCGAAAAACCACATAGATTTCGACT
GCATCATTACTTCCCTGGTTTTAATCGATTATATGACAAATGAGAAGGCA
TTAGTCTTGTTGATTCACCTAATTAGGCTATATTAATAATTGGGTAGGAG
TTTTATCAAATGAATCTTATGGCTCTTTGTATTACTTCAGGTGGTGTAGA
TACAAAATTATATTTGTATCTTCATTTCAGTTATTATCTATGGCATGATT
CTAGGATTTGGGGATTGACTTACGCATGAGTCAAAGGAAATATGATTTAC
CATGCCTCTAAGTGTTAGGCCCAGCAACATACTTAAGCATTGACCCTTAC
AAGTATAGCAAGAATGAAAATGTATACCAGGGATAAGACCAAAGCATAAA
TCTCGTGAATTTTATATTATTCGGTCTTTCTCTTTCATTCTCTATTAGCA
ATTATCAGTATCAAATATGCAGGAATATGGTCATCCCGTGTTCATAGCAT
CCTCATATCTTCTTAGAAGTACTGAATTGTGGTTTTCTGGAGAAAACCTG
AGATTTATTGTAACAGTTAATGTCATGTTTACATGATATATGCTGAGTTA
AGGAACATAATGGTTTGATTTTGGAATGGAGTGAAGCTTTTGGATTATGT
TTGTCTATTTGTTTTCTTAATAACCGCTTTCTATTTCTGTGTAGATAAAG
TTGCTTTCTACAGCAGTTCAGAATTATGGTTAGGATGTTGGGATGCTGAA
TTGATTCTTAATTAAGCAATACTGATGGGGACAGAACTTATGAGAGTTTG
TGTTAAAGAAGAGAACGATGATATTCCACCAGTTCCACCAGGTTTCGAGT
CATATGCATCTTTTACTCTAACAAGGGGGGCACAAGAGAATGTGAAACAT
GAGAATGATAATGTAAAGTATTGTTCAGCCTCCGCAACCACAATTAGTTC
TGTTGCCAATCCTGTCCAGAAGGAAACTGAGTTGGGCAATGGCGAAAGCA
CAAAGATTACAAGGTCTGTGAGGCGAAGACCTTGGATAAACTATGGTAGA
TACGATAACAGTCCAGAAGACGAGCTTGATTGTGAAAAGCTTGATCAAGT
TAGTTTCTTCTTGTAACTTATTTGTTGAACCTTCTGTTTTCTTTTCTTTG
TTTTCTTGAAAACACTGTTTTATAAAAGTTCTGGATGCTGATTTTGAAAA
AAATTCAAAATAGTATGCTATCACTTTATGGCAATTCTATATGGTGGTAG
TTTCATGTATGCCATTCATTTGAGCAGAATCAAAGATTGAGACATAATCT
TCCTAAAGGTGTCATTCGTGGATGTCCAGAGTGTAATGATTGCCAAAAGG
TGATTGCAAGATGGCATCCAGAGGAAGCATGTAGGCCAGGTGTTGAGGAT
GCGCCTGTGTTCTACCCGACAGAAAAGGAGTTTGAAGATACTTTGAACTA
TATAGCTAGCATACGACCAAAAGCAGAAAAATATGGAATCTGTCGCATTG
TTCCTCCATCTTCTTGGAAACCTCCTTGTCCTCTCAAAGAAAAGAATATA
TGGGAAAATGCTAGATTTGCTACTCGTGTGCAGAGGGTTGACAAACTTCA
GAATCGTAATTCAATGAGGAAAATGTCAAAAGTTAATAACAGTATGAGGA
GGAAAAGGAGAAGATACATGAGAATGGCTGTAGACTGTAGTTCTGATAGT
GGAAGTATCTGGTCTGCTGATGCCAGATTTTGTGAAGTAGAGAGGTTTGG
GTTTGAACCTGGTCCAGAGTTTACTCTGGATAAATTTCAGAAGTATGCTG
ATGATTTCAAGGCTCAGTACTTTAGGAGGAAGGAAAATGATGTAGATATG
GAAGGTAAAGTGACCGTTCTGCCAGATCTCCATGAAGCTTCAGTTGAGAA
TATTGAGGGTGAATACTGGCGCATAGTGGAGAAAGCAACTGAGGAAATAG
AGGTCTTATATGGGGCTGATCTGGAAACTGGGGTTTTTGGCAGTGGCTTT
CCTAAGAAGTCCAGTCAAGTTGGACTTGCTTCCAACGAGAAGTACATAAA
TTCTGGTTGGAACCTAAATAACTTCCCCAGGCTACCTGGATCCGTTCTCA
ATTATGAAAGCAGTGATATTTCTGGGGTTCTGGTTCCCTGGTTGTATGTA
GGAATGTGCTTTTCCTCCTTCTGTTGGCATGTTGAAGATCACCACCTATA
CTCGTTGAATTTCATGCATTGGGGTGCTCCGAAAATTTGGTATGGCGTTC
CTGGAAAGGATGCTCCTAAACTGGAGGAGGCTATGAAAAAGCATTTGCCT
GACCTTTTTGATGAACAACCTGACCTGCTTCACAAACTGGTCACTCAGCT
GTCCCCTTC

Search form

g.barbadense_cottongen_reftransV1_0093386, g.barbadense_cottongen_reftransV1_0093386 (contig) Gossypium barbadense

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