g.barbadense_cottongen_reftransV1_0093386, g.barbadense_cottongen_reftransV1_0093386 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ16_ARATH (Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana GN=JMJ16 PE=2 SV=1) HSP 1 Score: 505.368 bits (1300), Expect = 9.843e-157 Identity = 264/364 (72.53%), Postives = 305/364 (83.79%), Query Frame = 1 Query: 2272 EQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDS-GSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNE-KYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 +QN ++ LPKGV+RGC EC DCQKV ARWHP+EA RP +EDAPVFYP+E+EFEDTLNYIA IRP+AEKYGICRIVPP SWKPPCPLKEK +WE ++F TRVQRVDKLQNR+SM+K+SK+ N MR+K+R+ M+M +D ++ G SA E+E FGFEPGP FTL FQKYAD+FKAQYF++ E D + KV D E ++E++EGEYWRIV+KATEEIEVLYGADLETGVFGSGFPK SS +S+E KY SGWNLNNFPRLPGS+L YE SDISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGV GKDA KLEEAM+KHLPDLF+EQPDLLHKLVTQLSP Sbjct: 103 DQNCDVKPALPKGVVRGCEECKDCQKVTARWHPDEARRPDLEDAPVFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVPPPSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKISKLPNQMRKKKRKCMKMGMDSVTNGMGDPCSASTGMNELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSP 466 HSP 2 Score: 69.3218 bits (168), Expect = 1.740e-10 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDC 2083 MGTELMR+CVKE++DD+P VPPGFESYA+FTL R + A I SV+ Q + E+ + E+ R++RRRPWIN+ D D+ DC Sbjct: 1 MGTELMRICVKEDSDDLPSVPPGFESYATFTLKRVVPATTSDK--------AKTPAIESVSATEQAKMEVESDEAKA-ARALRRRPWINHSGCD----DDGDC 90
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JM703_ORYSJ (Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 3.398e-148 Identity = 237/360 (65.83%), Postives = 273/360 (75.83%), Query Frame = 1 Query: 2278 NQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 + R R LPKGV+RGC EC+DCQKVIA+W+P A RP +++APVFYPTE+EFEDTL YI SIRP AE YGICRIVPPSSWKPPC LK+K+IWE ++F+TRVQ+VDKLQNR S +K + RRK + + +G S ERFGFEPGPEFTL FQKYADDF QYFR+ D M+ +P SVE+IEGEYWRIVE TEEIEV+YGADLETG FGSGFPK S + + +KY SGWNLNN PRL GSVL++E DISGVLVPW+YVGMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGVPGKDA LE AM+KHLP+LF+EQPDLLH LVTQ SP Sbjct: 113 STRRRQQLPKGVLRGCAECSDCQKVIAKWNPAGARRPVLDEAPVFYPTEEEFEDTLKYIESIRPMAEPYGICRIVPPSSWKPPCLLKDKSIWEGSKFSTRVQKVDKLQNRKSSKKGRRGGMMKRRKLAESEENSATAHTQTGMQQSP-------ERFGFEPGPEFTLQTFQKYADDFSKQYFRK---DTSMDS----VP-----SVEDIEGEYWRIVEVPTEEIEVIYGADLETGTFGSGFPKLSPETKSDAEDKYAQSGWNLNNLPRLQGSVLSFEGGDISGVLVPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKHLPELFEEQPDLLHNLVTQFSP 453
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ18_ARATH (Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana GN=JMJ18 PE=2 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 7.238e-118 Identity = 206/352 (58.52%), Postives = 248/352 (70.45%), Query Frame = 1 Query: 2305 KGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSD-SGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 K I P +KV+ARW P+EA RP + DAPVF P+ +EF D L YI IRP AE YGICRI+PPS+WKPPC LKEK+IWE +F TR+Q VD LQNR M+K K RR+ R S + S S +A E+FGF G +FTLD+F+KYA FK YF +K++ D+ V P SV++IEGEYWRIVE+ T+E+EV YGADLE GV GSGF K++ + + E+Y SGWNLNN PRLPGSVL++E DISGVLVPWLYVGMCFSSFCWHVEDHHLYSLN+ H+G PK+WYGVPG +A LE+AM+KHLPDLF+EQPDLLH LVTQ SP Sbjct: 27 KDTIMEQPSSPRHRKVVARWLPDEAQRPIINDAPVFTPSLEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQNREPMKKKPKSRKRKRRRNSRMGSSKRRSGSSPAESTSSPEAE----EKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDI---VKWTP-----SVDDIEGEYWRIVEQPTDEVEVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLFEEQPDLLHGLVTQFSP 366
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ14_ARATH (Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 4.648e-117 Identity = 192/339 (56.64%), Postives = 240/339 (70.80%), Query Frame = 1 Query: 2347 KVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRN--SMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 K+ ARW+P EACRP V+DAP+FYPT ++F+D L YI +R KAE YGICRIVPP +W+PPCPLKEK IWEN++F TR+Q +D LQNR +K R + Y R D D+ S S+D+ +FGF+ GP+FTL++FQKY + FK YF+ + D G + V+++EGEYWRIVE+AT+E+EV YGADLET FGSGFPK ++ ++Y GWNLNN RLPGSVL +ES DISGV+VPWLYVGMCFS+FCWHVEDHHLYS+N++H G PK+WYG+PG A E MKK LPDLF+EQPDLLH+LVTQLSP Sbjct: 38 KITARWNPSEACRPLVDDAPIFYPTNEDFDDPLGYIEKLRSKAESYGICRIVPPVAWRPPCPLKEKKIWENSKFPTRIQFIDLLQNREPIKKSTKTKKRKRRRISKIGYTRRKRDSGCDTASSGSSDSE----GKFGFQTGPDFTLEEFQKYDEYFKECYFQSE----DHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDLLHQLVTQLSP 368
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ15_ARATH (Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana GN=JMJ15 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.237e-114 Identity = 205/367 (55.86%), Postives = 246/367 (67.03%), Query Frame = 1 Query: 2266 SFEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMS-KVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNE--KYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 S E +R H KG P KV+ARW P RP + +APVF+PT +EFEDTL YI IRP AE +GICRIVPPS+W PPC LK +IW+N F TRVQ VD LQNR ++K + K R K R + S S S+ + A E E FGFE GPEFTL+KF+KYA DFK YF RK+N + + SVE IEGEYWRI+EK T E++VLYG DLE + GSGF K ++ N+ KYI+SGWNLNN RL GS+L++E +ISGV VPWLYVGMCFS+FCWHVED+HLYSLN+ H+G PK+WYGVPG A LE+AM+KHLPDLFDEQPDLLH+LVTQ SP Sbjct: 16 SVEPPRRRCHRKNKGTNVEPPSSPYHPKVLARWDPANEKRPDIGEAPVFHPTSEEFEDTLAYIEKIRPLAESFGICRIVPPSNWSPPCRLKGDSIWKNKNFPTRVQFVDLLQNRGPVKKKTPKGRKRKRGKYSRTVAPKKRNGSVSKSVSTPKA--TEEENFGFESGPEFTLEKFEKYAQDFKDSYFERKDN-------------VGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGF-SKGVKIPTRRNDMDKYISSGWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHLPDLFDEQPDLLHELVTQFSP 366
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: JMJ19_ARATH (Probable inactive lysine-specific demethylase JMJ19 OS=Arabidopsis thaliana GN=JMJ19 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 9.311e-64 Identity = 139/322 (43.17%), Postives = 180/322 (55.90%), Query Frame = 1 Query: 2392 VEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 +E+APVF PTE+EF DTL+YI+S+R +AE YGIC +VPP SWKPPC LKEK IWE + F +VQ +Q N RK+ K + +DS S + C VER GP +TL F+ +AD +K +F K+ + E L +E V +IE EY +IVE EI VLYG DL+T FGSGFP + S +SGWNLN+ +LPGS+L+ E D V VP L VGMC SS W E LYSL ++H GAP++WY V G K + AMK + ++ EQP H V +SP Sbjct: 105 LEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGICCVVPPPSWKPPCLLKEKQIWEASTFFPQVQLFG-IQTEN--RKIKK-----------------EVDADSNDAASEGVQLCRVER-----GPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKP-NELIVADIEKEYRQIVESPLIEIGVLYGNDLDTATFGSGFP-----LSAPSESSKYSSGWNLNSTAKLPGSLLSLE--DCESVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFILEMSGEQPKKSHNPVMMMSP 393
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5_DROME (Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.981e-55 Identity = 103/207 (49.76%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL +F + AD FK +YFR+ +H E +E E+WRIV E++ V YGADL T GSGFP KSS L +++Y S WNLNN P L S+L + ++DISG+ PW+YVGMCF++FCWH EDH YS+N++HWG PK WYGVPG A + EE MK+ P+LF QPDLLH+LVT ++P Sbjct: 505 EAFGFEQAEREYTLQQFGQMADQFKQEYFRKP---------------VHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNP 696 HSP 2 Score: 63.5438 bits (153), Expect = 1.083e-8 Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF PT +EF++ L YI+ IR AEK GI +I+PP++W PP + + RF RVQR+++L+ + ++ Sbjct: 160 ECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKL----RFVPRVQRLNELEAKTRVK 229
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5A_MOUSE (Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.172e-54 Identity = 107/208 (51.44%), Postives = 136/208 (65.38%), Query Frame = 1 Query: 2740 ERFGFEPG-PEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVG-LASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL F + AD+FK+ YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFPKK Q L E+Y SGWNLNN P L SVL + + DISG+ VPWLYVGMCFSSFCWH+EDH YS+N++HWG PK WYGVP A +LEE M++ P+LF+ QPDLLH+LVT ++P Sbjct: 350 EAFGFEQAVREYTLQSFGEMADNFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNP 542 HSP 2 Score: 66.6254 bits (161), Expect = 1.502e-9 Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF P+ +EF D L++I IRP AEK GIC+I PP W+PP + K RF RVQR+++L+ +R Sbjct: 18 ECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKIRPPKDWQPPFACEVKTF----RFTPRVQRLNELEAMTRVR 87
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5D_CANFA (Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.651e-54 Identity = 107/208 (51.44%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE E+TL F + AD FKA YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFP SSQ L+ E+Y SGWNLN P L SVL + ++DISG+ VPWLYVGM FS+FCWH+EDH YS+N++HWG PK WYGVP A +LEE MK+ P+LFD QPDLLH+LVT ++P Sbjct: 374 EAFGFEQATQEYTLQSFGEMADSFKADYFS--------------MP-VHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQPDLLHQLVTLMNP 566 HSP 2 Score: 70.0922 bits (170), Expect = 1.089e-10 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 2398 DAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMR 2619 + PVF PT EF D L+YI IRP AEK GIC+I PP+ W+PP ++ +N RF R+QR+++L+ + ++ Sbjct: 13 ECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKIRPPADWQPPFAVE----VDNFRFTPRIQRLNELEAQTRVK 82
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Match: KDM5B_HUMAN (Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3) HSP 1 Score: 210.305 bits (534), Expect = 6.818e-54 Identity = 102/208 (49.04%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 2740 ERFGFEPGP-EFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLA-SNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 E FGFE ++TL F + AD FK+ YF +P +H E +E E+WR+V E++ V YGAD+ + FGSGFP + ++ L+ E+Y++SGWNLNN P + SVL + ++DI G+ +PWLYVGMCFSSFCWH+EDH YS+N++HWG PK WYGVPG A +LE MKK P+LF QPDLLH+LVT ++P Sbjct: 366 EAFGFEQAARDYTLRTFGEMADAFKSDYFN--------------MP-VHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNP 558
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: B9IPA3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s03550g PE=4 SV=2) HSP 1 Score: 552.362 bits (1422), Expect = 7.417e-172 Identity = 278/364 (76.37%), Postives = 315/364 (86.54%), Query Frame = 1 Query: 2269 FEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSI-WSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 QN R LPKGVIRGCP+C++CQKV ARW PE A +P +EDAPVFYPTE+EFEDTL YIASIRPKAE+YGICRIVPP SWKPPCPLKE+ +WE + FATRVQRVDKLQNR+SMRKMS ++N R+KRRR MRMA+DC +D GSI S D CE E FGFEPGP FTLDKFQKYADDF AQYF++ EN ++ G +T+L + E +++NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPK SS+VG A+N++Y SGWNLNNFPRLPGSVL++ES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGA KIWYGVPGKDA KLEEAM+K+LPDLF+EQPDLLHKLVTQLSP Sbjct: 101 LNQNLSSRSQLPKGVIRGCPQCSNCQKVSARWQPEYARKPDIEDAPVFYPTEEEFEDTLKYIASIRPKAEQYGICRIVPPPSWKPPCPLKEETVWEGSTFATRVQRVDKLQNRDSMRKMSTMSNHTRKKRRRCMRMAIDCGADIGSISRSNDTGVCEAESFGFEPGPLFTLDKFQKYADDFMAQYFKKDENTINKGGSMTMLQENCEPTLDNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSSEVGSATNDRYTKSGWNLNNFPRLPGSVLSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAQKIWYGVPGKDAVKLEEAMRKYLPDLFEEQPDLLHKLVTQLSP 464 HSP 2 Score: 110.538 bits (275), Expect = 3.486e-21 Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 2 Query: 1772 LMGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 +MGTEL+RV VKEENDDIP VPPGFES+A+F L R Q+ K E+ N+ CSA+A+ S+ PV+ ET G + K+TRS+RRRPWI YG D EDE D KL+Q Sbjct: 1 MMGTELIRVRVKEENDDIPSVPPGFESFAAFNLNR-VQDGEKQES-NIISCSATASASESL--PVKMET--GFEDEAKVTRSLRRRPWIKYGHLDGCSEDESDSAKLNQ 103
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: F6H616_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0036g00570 PE=4 SV=1) HSP 1 Score: 546.969 bits (1408), Expect = 7.466e-170 Identity = 271/370 (73.24%), Postives = 302/370 (81.62%), Query Frame = 1 Query: 2278 NQRL---RHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIW-SADAR------FCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 NQ L R LPKGVIRGC EC CQKV ARW PE+ACRP +E+APVFYP+E+EFEDTL YIASIR +AE YGICRIVPPSSWKPPCPLKEKNIWE ++FATR+QRVDKLQNR+SMRKM +V N RRKRRR M +D + + +AD C+ E FGFEPGPEFTLD FQKYADDF+AQYF + N D+ G +T+ +L E SVENIEGEYWRIVEK TEEIEVLYGADLETG FGSGFPK S+ VG S+E+Y SGWNLNNFPRLPGSVL +ES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPG+DA KLE AM+K LPDLF+EQPDLLHKLVTQLSP Sbjct: 96 NQNLPFRRPCLPKGVIRGCLECIHCQKVTARWCPEDACRPDLEEAPVFYPSEEEFEDTLKYIASIRSRAEPYGICRIVPPSSWKPPCPLKEKNIWEGSKFATRIQRVDKLQNRDSMRKMPRVQNQTRRKRRRCMGTGIDFGPGTEDVLGTADVLGLGQVGSCDGETFGFEPGPEFTLDAFQKYADDFRAQYFSKNGNATDLRGNMTISQELREPSVENIEGEYWRIVEKPTEEIEVLYGADLETGDFGSGFPKVSNPVGSTSDERYTKSGWNLNNFPRLPGSVLAFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGQDALKLEAAMRKRLPDLFEEQPDLLHKLVTQLSP 465 HSP 2 Score: 80.8777 bits (198), Expect = 4.761e-12 Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRY 2053 MGTEL+R CVKEEN D VPPGFES SFTL R +N+ C AS T S + ++ ETE ++ I+RS+RRRPWINYG++ Sbjct: 1 MGTELIRACVKEENLD---VPPGFESLTSFTLKR------VEDNEITTPCLAS--TSGSESQSIKMETEFDISDAANISRSLRRRPWINYGQF 82
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: A0A067JLR4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23546 PE=4 SV=1) HSP 1 Score: 544.658 bits (1402), Expect = 6.520e-169 Identity = 281/364 (77.20%), Postives = 310/364 (85.16%), Query Frame = 1 Query: 2269 FEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWS-ADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 QN LR LPKGVIRGC +C +CQKV ARWHPE A RP +EDAPVFYPTE+EFEDTL YIASIRPKAE YGICRIVPP SWKPPCPLKEK+IWE + FATRVQRVDKLQNR+S++KMS++ N R+KRR+ MRMAVD +D SI +DA CE E FGF PGPEFTL+ FQKYADDFK QYFR+ +N ++ EG V VL + E +V+NIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPK SSQVG NE Y SGWNLNNFPRLPGSVL+YES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPK+WYGVPGKDA KLE AM+KHLPDLF+EQPDLLHKLVTQLSP Sbjct: 105 LNQNLSLRPPLPKGVIRGCAQCINCQKVTARWHPEYARRPDIEDAPVFYPTEEEFEDTLKYIASIRPKAEPYGICRIVPPPSWKPPCPLKEKSIWEGSTFATRVQRVDKLQNRDSLKKMSRLYNHTRKKRRKCMRMAVDGRTDIESISGCSDAGVCEAEGFGFAPGPEFTLNTFQKYADDFKNQYFRKNDNIINKEGSVAVLDENWEPTVDNIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKISSQVGSDINEHYAKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDAIKLEVAMRKHLPDLFEEQPDLLHKLVTQLSP 468 HSP 2 Score: 121.324 bits (303), Expect = 1.775e-24 Identity = 63/108 (58.33%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 1775 MGTELMRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MGTELM +CVKEEND+IP VPPGFES+A+FTL R Q++ HE+ +V CS SAT +S V+ E E TKITRS+RRR WINYG+ DN+ EDE D KL+Q Sbjct: 1 MGTELMSLCVKEENDEIPSVPPGFESFAAFTLKR-MQKSENHESQDVISCSTSATASTSELQSVKMEVESDVCSDTKITRSLRRRAWINYGQLDNNLEDESDSAKLNQ 107
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: B9S7K7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0609080 PE=4 SV=1) HSP 1 Score: 541.191 bits (1393), Expect = 2.253e-168 Identity = 274/364 (75.27%), Postives = 309/364 (84.89%), Query Frame = 1 Query: 2269 FEQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSA-DARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 Q+ LR +LPKGVIRGC +C +CQKV ARWHPE A +P +E+APVFYPTE+EFEDT+ YIASIR KAE YGICRIVPP SWKPPCPLKEK+IWE ++FATRVQRVDKLQNR+SM+KMS++NN ++KRRR MRMAVDC +D GSI D CE E FGFEPGP+F+L+ FQKYADDFKAQYF + ++ L + E +VENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPK S QVG +NE+Y SGWNLNNFPRLPGSVL+YES DISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MHWGAPKIWYGVPGKDA KLE+AM+KHLPDLF+EQPDLLHKLVTQLSP Sbjct: 98 LNQDLTLRSHLPKGVIRGCAQCMNCQKVTARWHPEYARKPDLEEAPVFYPTEEEFEDTIKYIASIRLKAEPYGICRIVPPPSWKPPCPLKEKSIWEGSKFATRVQRVDKLQNRDSMKKMSRMNNHTKKKRRRCMRMAVDCGTDIGSISGCIDVGACEAESFGFEPGPQFSLNTFQKYADDFKAQYFTKNDSITSKAVNTAFLQENWEPTVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSGQVGSDTNERYAKSGWNLNNFPRLPGSVLSYESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDAVKLEQAMRKHLPDLFEEQPDLLHKLVTQLSP 461 HSP 2 Score: 97.4413 bits (241), Expect = 4.083e-17 Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 1790 MRVCVKEENDDIPPVPPGFESYASFTLTRGAQENVKHENDNVKYCSASATTISSVANPVQKETELGNGESTKITRSVRRRPWINYGRYDNSPEDELDCEKLDQ 2098 MRVC+KEE+D+IP VPPGFES+A+FTL R Q++ HE+ N+ S+++ +S + PV+ E E G TK TRS+RRR WINYG+ +N DE D KL+Q Sbjct: 1 MRVCIKEESDEIPSVPPGFESFAAFTLKR-VQDSENHESQNI--VRFSSSSSASESQPVKMEMESDIGTVTKATRSLRRRAWINYGQLENCSGDESDSGKLNQ 100
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Match: M1ATH1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011477 PE=4 SV=1) HSP 1 Score: 528.48 bits (1360), Expect = 2.864e-165 Identity = 259/362 (71.55%), Postives = 295/362 (81.49%), Query Frame = 1 Query: 2272 EQNQRLRHNLPKGVIRGCPECNDCQKVIARWHPEEACRPGVEDAPVFYPTEKEFEDTLNYIASIRPKAEKYGICRIVPPSSWKPPCPLKEKNIWENARFATRVQRVDKLQNRNSMRKMSKVNNSXXXXXXXXXXXAVDCSSDSGSIWSADARFCEVERFGFEPGPEFTLDKFQKYADDFKAQYFRRKENDVDMEGKVTVLPDLHEASVENIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKKSSQVGLASNEKYINSGWNLNNFPRLPGSVLNYESSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNFMHWGAPKIWYGVPGKDAPKLEEAMKKHLPDLFDEQPDLLHKLVTQLSP 3357 +QN +RH+LPKGVIRGC C +CQ+V ARW PEEA RP + DAPVFYPTE+EFEDTL Y+ASIR KAE YGICRIVPP+SWKPPCPL+EK IWE ++FATR+QR+DKLQNR+SMR+M + N ++KRRR + VD + GS+ + + ERFGFEPGPEFTLD FQKYADDFKAQYFR+ E S+ENIEGEYWR+VEK TEEIEVLYGADLETGVFGSGFPK QVG +S+ KY+NSGWNLNNFPRL GSVL YESSDISGVLVPWLY+GMCFSSFCWHVEDHHLYSLN+MH+GAPK+WYGVPG DA KLE AM+KHLPDLF+EQPDLLHKLVTQLSP Sbjct: 82 DQNTSVRHSLPKGVIRGCEGCLNCQRVTARWRPEEASRPDLGDAPVFYPTEEEFEDTLTYMASIRTKAEAYGICRIVPPASWKPPCPLEEKIIWEKSKFATRIQRIDKLQNRDSMRRMWEANIHKKKKRRRCSKPGVDLGN--GSV--DNRNLGDTERFGFEPGPEFTLDAFQKYADDFKAQYFRQSEGQC--------------PSLENIEGEYWRMVEKPTEEIEVLYGADLETGVFGSGFPKHDHQVG-SSDTKYVNSGWNLNNFPRLTGSVLTYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPGADASKLEAAMRKHLPDLFEEQPDLLHKLVTQLSP 424 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0093386 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093386 ID=g.barbadense_cottongen_reftransV1_0093386; Name=g.barbadense_cottongen_reftransV1_0093386; organism=Gossypium barbadense; type=contig; length=3359bpback to top |