g.barbadense_cottongen_reftransV1_0093379, g.barbadense_cottongen_reftransV1_0093379 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0093379
Unique Name	g.barbadense_cottongen_reftransV1_0093379
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	2972

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Dt05	chromosome	g.barbadense_cottongen_reftransV1_0093379:1..2972 . Dt05:4268726..4276033 -		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.608e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1

Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.642e-19
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = -1

Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  121 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTINL 264

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.714e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1

Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.723e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1

Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   65 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 207

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.897e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1

Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.973e-19
Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = -1

Query:  753 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1190
            PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + ++L
Sbjct:  122 PEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTISL 264

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_PONAB (DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.043e-18
Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = -1

Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +Y + Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYPE-QSKYRVMNKDQWYNVLEFSRAVH 208

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_DANRE (DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.220e-18
Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = -1

Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  DS  KL+ +L  L   +   ++++  Y YAF +   E+ Q+S+D+ +   +L L+LG  + P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  109 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRYAFDFA-REKDQRSLDLNTAKCMLGLLLGKTW-PLFPVFNQFLE-QSKYKVINKDQWCNVLEFSRTINL 252

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCN1M_DICDI (DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = -1

Query:  759 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSN-YEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV 1190
            PEGI   CSD+G+      IL+LAW + A K GYF+++E+ +G + L    LS LKK L+   ++++  S  + D Y YAF +    E +KSVD+ +  E+L L+L     P   +   +L  Q + K IN DQW+ FL F + V
Sbjct:   96 PEGIARFCSDIGLAPDSFEILVLAWTMNASKMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASEVESKKSVDLGTAAEMLKLLLPEG--PHTTNFAAFLCTQPN-KSINKDQWLCFLEFSRTV 237

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.920e-10
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = -1

Query:  771 EGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCL-TEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYL-KVQNDYKVINSDQWINFLRF 1187
            EG+E  C+DL VD T+ R+L+LAWK +A     FT+ E+  G KA+  DS+  +      L  E ++   ++D Y + F++ L +EE Q+S+  E    L  LV      P +D  + +L +  +  K I+ D W  FL F
Sbjct:  109 EGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNF 249

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2RTM3_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_006G107200 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.730e-56
Identity = 111/178 (62.36%), Postives = 141/178 (79.21%), Query Frame = -1

Query:  726 KE*FSLQNYIHIFFLIPLVCLSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKFANF 1259
            KE   + N  H +    L  +  PEGIE LCSD+ VD+TDVRILMLAWK+KAEKQGYFT +EW+ G+KAL  D++SKL+KAL +LEKEV++PSN+EDFY+Y+F YCLTEEKQKS+DIESIC+LL+LVLG  FR Q+D  IEYLK+Q+DYKVIN DQW+ F RFC E++  +   F+N+
Sbjct:   37 KEMERIDNLFHSYANTSLGMID-PEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGYFTLEEWRRGMKALRADTVSKLRKALPELEKEVKRPSNFEDFYSYSFCYCLTEEKQKSIDIESICQLLDLVLGSHFRAQVDYFIEYLKIQSDYKVINMDQWMGFFRFCNEISFPD---FSNY 210

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A067DJ10_CITSI (Defective in cullin neddylation protein OS=Citrus sinensis GN=CISIN_1g027078mg PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.442e-56
Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = -1

Query:  714 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF-ANFIFPF 1190
            PEGIE+LCSD+ V +TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D+++KLKKAL DLEKEV++P+N++DFY +AFRYCLTEEKQKSVDIES+CELL LVLG Q+R Q+D LIEYLK+Q+DYKVIN DQW+ F RFC E++  +   +  N  +P 
Sbjct:   53 PEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPL 212

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: V4S0E7_9ROSI (Defective in cullin neddylation protein OS=Citrus clementina GN=CICLE_v10026425mg PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.442e-56
Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = -1

Query:  714 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF-ANFIFPF 1190
            PEGIE+LCSD+ V +TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D+++KLKKAL DLEKEV++P+N++DFY +AFRYCLTEEKQKSVDIES+CELL LVLG Q+R Q+D LIEYLK+Q+DYKVIN DQW+ F RFC E++  +   +  N  +P 
Sbjct:   53 PEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPL 212

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A067DJB7_CITSI (Defective in cullin neddylation protein OS=Citrus sinensis GN=CISIN_1g027078mg PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.805e-56
Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = -1

Query:  714 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF-ANFIFPF 1190
            PEGIE+LCSD+ V +TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D+++KLKKAL DLEKEV++P+N++DFY +AFRYCLTEEKQKSVDIES+CELL LVLG Q+R Q+D LIEYLK+Q+DYKVIN DQW+ F RFC E++  +   +  N  +P 
Sbjct:   55 PEGIESLCSDIEVSHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKALPDLEKEVKRPTNFQDFYAFAFRYCLTEEKQKSVDIESVCELLGLVLGSQYRAQVDYLIEYLKIQSDYKVINMDQWMGFYRFCNEISFPDFNNYDPNLAWPL 214

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A0D2SV90_GOSRA (Defective in cullin neddylation protein OS=Gossypium raimondii GN=B456_006G107200 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.844e-56
Identity = 109/166 (65.66%), Postives = 134/166 (80.72%), Query Frame = -1

Query:  762 KE*FSLQNYIHIFFLIPLVCLSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKE 1259
            KE   + N  H +    L  +  PEGIE LCSD+ VD+TDVRILMLAWK+KAEKQGYFT +EW+ G+KAL  D++SKL+KAL +LEKEV++PSN+EDFY+Y+F YCLTEEKQKS+DIESIC+LL+LVLG  FR Q+D  IEYLK+Q+DYKVIN DQW+ F RFC E
Sbjct:   37 KEMERIDNLFHSYANTSLGMID-PEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGYFTLEEWRRGMKALRADTVSKLRKALPELEKEVKRPSNFEDFYSYSFCYCLTEEKQKSIDIESICQLLDLVLGSHFRAQVDYFIEYLKIQSDYKVINMDQWMGFFRFCNE 201

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 22


Match Name	E-value	Identity	Description
DCNL5_RAT	1.608e-19	36.99	DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d...	[more]
DCNL4_HUMAN	1.642e-19	40.14	DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=...	[more]
DCNL5_MOUSE	1.714e-19	36.99	DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=...	[more]
DCNL5_BOVIN	1.723e-19	36.99	DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 ...	[more]
DCNL5_HUMAN	1.897e-19	36.99	DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=...	[more]
DCNL4_MOUSE	5.973e-19	39.73	DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=...	[more]
DCNL5_PONAB	1.043e-18	36.30	DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=...	[more]
DCNL4_DANRE	1.220e-18	39.46	DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3...	[more]
DCN1M_DICDI	1.832e-16	37.93	DCN1-like protein 2 OS=Dictyostelium discoideum GN...	[more]
DCNL3_RAT	1.920e-10	34.04	DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d...	[more]

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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2RTM3_GOSRA	2.730e-56	62.36	Defective in cullin neddylation protein OS=Gossypi...	[more]
A0A067DJ10_CITSI	3.442e-56	67.50	Defective in cullin neddylation protein OS=Citrus ...	[more]
V4S0E7_9ROSI	3.442e-56	67.50	Defective in cullin neddylation protein OS=Citrus ...	[more]
A0A067DJB7_CITSI	3.805e-56	67.50	Defective in cullin neddylation protein OS=Citrus ...	[more]
A0A0D2SV90_GOSRA	3.844e-56	65.66	Defective in cullin neddylation protein OS=Gossypi...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005176	Potentiating neddylation domain	PFAM	PF03556	Cullin_binding	coord: 57..153 e-value: 1.6E-15 score: 57.5
IPR005176	Potentiating neddylation domain	PROSITE	PS51229	DCUN1	coord: 1..170 score: 28.284
IPR014764	Defective-in-cullin neddylation protein	PANTHER	PTHR12281	RP42 RELATED	coord: 4..148
None	No IPR available	PANTHER	PTHR12281:SF12	DEFECTIVE IN CULLIN NEDDYLATION PROTEIN	coord: 4..148

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0093379 ID=g.barbadense_cottongen_reftransV1_0093379; Name=g.barbadense_cottongen_reftransV1_0093379; organism=Gossypium barbadense; type=contig; length=2972bp
CCTTCATTGAGTAACAAATCTTTTTCTTTTCTTTATTTTTTTTTGCTTAA
AATAACAAACTGTAAAAAGGAAAAAGGAACTATTAATGAATGCTGAATGT
ATAAACCATCGGAGGACAACAAAATTGCAGCTTTAACCAGAGAAAAAGGT
TCAGTAAAATCAGTTTAATCAGTTATGATATGAGCCAAGCTCCAAGGTTG
CTGTGGTTAGGTTTTCCACAAGGTCTTGTCCTGTCGACAAATTAATCAAA
ATGAAAATTTTATAGTTCTTTAATACATTCAAGGGCATAACATCTAAGGG
ACACACAGAGAAAGCATTTACCATATGAAATCAGCAATCTGCAAGACATA
CAAAAAATGGCAACACTAGCTATGCTTTTCTCTCATCCATTCAACATAAT
TATCAAGGATCAAGGGCCAAGCTTGGATTGCATCATAGTTTTCAAGATCT
GGAAAGCTAATCTGTTCTAGCAAAGATTCAAAGTTATTATAGATGCCTCA
AGGTTGCTTGAGGAAAAAGAAAATTATGATAATAAAAGAAACTAATGCCT
TTTCATCAAATATCAAGTACATACGTCAAGCATGTGAAATCTAGCATGTA
TTATTCATATTTTTACATGTCATTTTCTTTTCTTAGTTTTTCTTCATTCT
GGCAGCCAACACTGACTTCCAATGCAGATGGAAAGAAACTTTATGGTATT
GAGTTATGGCGGCAAATGGGAAAATAAAATTAGCAAACTTGTACATTTCC
AAAAGGTTTACCTCCTTGCAAAAACGTAGAAAATTTATCCACTGGTCTGA
ATTTATTACTTTGTAATCATTCTGGACCTTCAGATATTCAATTAGTGAAT
CAATCTGAGGACGAAATTGAACCCCTAGAACAAGATTCAACAATTCACAG
ATGCTTTCTATGTCCACACTCTTTTGCTTCTCCTCTGTCAAACAGTATCG
AAATGCATAGGTATAGAAATCCTCATAATTGGATGGCTTCTCCACCTCTT
TCTCCAAATCAGAGAGCGCCTTCTTTAGTTTGCTAAGTGAATCAACCCCC
AATGCTTTAAGGCCTGTTTGCCACTCATCCTGGGTAAAATAGCCCTGCTT
TTCAGCTTTTAGTTTCCAAGCGAGCATCAATATCCTGACATCAGTGTAGT
CCACTCCTAGATCTGAACAGAGTGCTTCAATACCTTCTGGACTGCTCAAG
CAAACTAAGGGTATTAAAAAAAAGATATGTATGTAATTCTGTAAAGAAAA
TCATTCTTTGTGCATCCATGGGACTTGTCTTCAATTGTTTCATACAAATT
AGGTTTGCATCTGTGTGACCTCACATCAAACTAATCAGACAAAAGGAAGT
CCTAAGCATTTGTCGGTAAGTACCATGATATGAAATATAACTCTATGTAT
CATGCAATAACATATGAGACATTATGTTCAAACAACAATTATGAATAATG
TAATTCCTTTAAGAACCAAAAGCTGAGAGAGATGCTTGACCTTGAAAAAT
GATAGCAGCATGATTTGGATAAGTATAATAATTTTATTTGACATTTTCTT
TTGTATTTATAAATAATTACACCAATTGATCATTGAGCAAGAGCAAGAAG
TTCATATCACCATATCAGTAACTCTAAAAATATAAAAGAATGCAGACAAT
AAGTACTTACTCAATCATGCCAAAGGAACTATTTGCATATGTATTGAACA
AGCGATCTATTTTTTCCAGCCCCTTTATTTTAGCTTTACTTGAGACTGAA
ACAAAGAGTAGCATTATCTAATAAGAATACCGGGCACCTCACAAGAAAAA
CCCGAAAACTTAGTCGATTAAATATTAGGGGACCATCATTACCATTACTG
TATCCAACTAACATTCAAGTCAGATAGCAATTTGAATGCCGGTTCATGTC
ATTTTCAGAAGCAAACGTCATGCAATTAATTCTCTATAAAAATTATCAAT
ATTCTACATATCAACCTTCTCAGAATGCCACTTTAGTTATTATTAAACCC
TATAAGGCTATTCACACACCAGTTAGGGGACCGAAAAGACACGAATCCTA
CTGACAACAGGAAAACGAGTCCAAGTTGGGCTCATTACATGGAGAACCAT
CATGAACAAAAAGCAAAATCCTTTTCAATAGTTTGAACCTATGTCTTCCT
CACTCCTAGCATTAACTTTCAGCTCTAATGCTAAAAGGCCCTATTTTTTA
TCTCCCTCATACGCTATTTTCCCTAACTTGCTGTGAAAAAGAACCTGTAA
TATTAATTATAATATTGATAAATCCCAGGAGATATGTTCAATAATTCAAT
CAAAGAACGAATCAGATTTATATGGCCATCGATTGATTTAGACTGTATCC
TAAGAAGCTTCCTAGCCTAAAAAAGGAGAAGATTTAACAGAAGATGATTA
AAATATAGTTAGTGCACAATTCTTCAATTTAACGTATTCTCTTTTCCCGC
GGTTTCTGAGAAGCTAATCTGAGTGGAGCAGTCGTCATTCACACACCGAC
AAACCAAAATAAAATAAAAGAGAGTAAATAACAATGATTACTGTTAAGAA
ATAATGGGGTATTGTACGATTTTCGCTTAAATTCTTTTACTTTCATTGAT
CTTTTTCCCGCGCTTTCTCGGTTACCAAACAATAAAACACATAAAAATCA
CTTTTTTTAAGGGAAAAAATAAAATAAGAAAAGGAGAGGGATGTACCAGA
ACGACCGTCGGATGACGTGACGGATGAGGAATTGGGTGGGGCAGATTTAC
GCTTAGATGCGCGGGGAGGCATTGGTGACAAAAGAGATCGGACTGAAGCC
AATGATGGAACAACCACAGCCACTCGATTTGATGACCAATGACCAATTGA
CTGAAGAGGAAAAAGAAACCCAGAACCCTAGATCCAATGATATTTAGAGA
GAGGCAGCGAGACTGTACTAACACAACAGACTAACACAAGATAGAGATAG
AGATAGAGATAGAGATATAATT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR005176	PONY_dom
IPR014764	DCN-prot

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g.barbadense_cottongen_reftransV1_0093379, g.barbadense_cottongen_reftransV1_0093379 (contig) Gossypium barbadense

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