g.barbadense_cottongen_reftransV1_0093379, g.barbadense_cottongen_reftransV1_0093379 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0093379
Unique Nameg.barbadense_cottongen_reftransV1_0093379
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2972
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt05chromosomeg.barbadense_cottongen_reftransV1_0093379:1..2972 .
Dt05:4268726..4276033 -		n/a
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_RAT (DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.608e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_HUMAN (DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.642e-19
Identity = 59/147 (40.14%), Postives = 88/147 (59.86%), Query Frame = -1 
Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  121 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRNTLDYLRSFLNDSTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTINL 264
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_MOUSE (DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.714e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQSRFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_BOVIN (DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.723e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   65 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 207
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_HUMAN (DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.897e-19
Identity = 54/146 (36.99%), Postives = 91/146 (62.33%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +YL+ Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYLE-QSKYRVMNKDQWYNVLEFSRTVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_MOUSE (DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.973e-19
Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = -1 
Query:  753 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1190
            PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  D+  KL+  L  L   +   +N++  Y YAF +   E+ Q+S+DI +   +L L+LG +  P      ++L+ Q+ YKVIN DQW N L F + ++L
Sbjct:  122 PEGMEKFCEDIGVEPENVVMLVLAWKLDAQNMGYFTLQEWLKGMTSLQCDTTEKLRTTLDYLRSLLNDTTNFKLIYRYAFDFA-REKDQRSLDINTAKCMLGLLLG-KIWPLFPVFHQFLE-QSKYKVINKDQWCNVLEFSRTISL 264
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL5_PONAB (DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.043e-18
Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = -1 
Query:  756 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVN 1193
             PEG+E  C D+GV+  ++ +L+LAWKL+AE  G+FT++EW  G+ +L  D   KL+     L  ++   S++++ Y YAF +   ++ Q+S+DI++   +L L+LG  + P      +Y + Q+ Y+V+N DQW N L F + V+
Sbjct:   66 GPEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKGMTSLQCDCTEKLQNKFDFLRSQLNDISSFKNIYRYAFDFA-RDKDQRSLDIDTAKSMLALLLGRTW-PLFSVFYQYPE-QSKYRVMNKDQWYNVLEFSRAVH 208
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL4_DANRE (DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.220e-18
Identity = 58/147 (39.46%), Postives = 89/147 (60.54%), Query Frame = -1 
Query:  753 SPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNL 1193
             PEG+E  C D+GV+  +V +L+LAWKL A+  GYFT  EW  G+ +L  DS  KL+ +L  L   +   ++++  Y YAF +   E+ Q+S+D+ +   +L L+LG  + P      ++L+ Q+ YKVIN DQW N L F + +NL
Sbjct:  109 GPEGMEKFCEDIGVEPENVVMLVLAWKLDAQSMGYFTLQEWLKGMGSLQCDSTEKLRNSLDYLRSVLNDATSFKLIYRYAFDFA-REKDQRSLDLNTAKCMLGLLLGKTW-PLFPVFNQFLE-QSKYKVINKDQWCNVLEFSRTINL 252
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCN1M_DICDI (DCN1-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0272016 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = -1 
Query:  759 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSN-YEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEV 1190
            PEGI   CSD+G+      IL+LAW + A K GYF+++E+ +G + L    LS LKK L+   ++++  S  + D Y YAF +    E +KSVD+ +  E+L L+L     P   +   +L  Q + K IN DQW+ FL F + V
Sbjct:   96 PEGIARFCSDIGLAPDSFEILVLAWTMNASKMGYFSKNEFSSGFEKLQCSDLSTLKKQLNSTSQKLKHDSTKFTDLYKYAFGFASEVESKKSVDLGTAAEMLKLLLPEG--PHTTNFAAFLCTQPN-KSINKDQWLCFLEFSRTV 237
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.920e-10
Identity = 48/141 (34.04%), Postives = 75/141 (53.19%), Query Frame = -1 
Query:  771 EGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCL-TEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYL-KVQNDYKVINSDQWINFLRF 1187
            EG+E  C+DL VD T+ R+L+LAWK +A     FT+ E+  G KA+  DS+  +      L  E ++   ++D Y + F++ L +EE Q+S+  E    L  LV      P +D  + +L +  +  K I+ D W  FL F
Sbjct:  109 EGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSIDGICARFPSLLTEAKQEDKFKDLYRFTFQFGLDSEEGQRSLHREIAIALWKLVFTQNNPPVLDQWLNFLTENPSGIKGISRDTWNMFLNF 249
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: M0RKZ1_MUSAM (Defective in cullin neddylation protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 2.432e-59
Identity = 112/163 (68.71%), Postives = 135/163 (82.82%), Query Frame = -1 
Query:  714 LSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF-ANFIFPF 1199
            L  PEGIE+ CSDL VDYTDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D++SKLKK+LS+LEKEV +P+N+ DFY+Y+FRYCLTE+KQK +DIES CELL+LVLG QFRPQ+D L+EYLK Q DYKVIN DQW +FLRFC E+N L +  + A   +P 
Sbjct:   54 LIDPEGIESFCSDLEVDYTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALHADTISKLKKSLSELEKEVARPTNFSDFYSYSFRYCLTEDKQKCIDIESACELLDLVLGFQFRPQVDKLVEYLKHQRDYKVINMDQWTSFLRFCNEINFLSLDNYDAELAWPL 216
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: B9IMH9_POPTR (Defective in cullin neddylation protein OS=Populus trichocarpa GN=POPTR_0018s12020g PE=4 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 3.781e-59
Identity = 110/160 (68.75%), Postives = 138/160 (86.25%), Query Frame = -1 
Query:  714 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF-ANFIFPF 1190
            PEGIEALCSD+ V++TDVRILM AWKLKA++QGYFT+DEW++G+KAL VDSLSKLKK L +LEKEV  P N++DFY+YAFRYCLTEEKQK+VDIES+CELLNLVLG QF+ ++D LIEYLK+Q+DYK IN DQW+ FLRFCKE++  ++  + A+  +P 
Sbjct:   57 PEGIEALCSDMSVEHTDVRILMFAWKLKAQRQGYFTRDEWRSGMKALKVDSLSKLKKGLPELEKEVNTPENFQDFYSYAFRYCLTEEKQKTVDIESVCELLNLVLGSQFQSKVDLLIEYLKIQSDYKAINLDQWMGFLRFCKEISFPDLENYDADLAWPL 216
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: K4CAX8_SOLLC (Defective in cullin neddylation protein OS=Solanum lycopersicum GN=Solyc07g005060.2 PE=4 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.261e-58
Identity = 112/155 (72.26%), Postives = 132/155 (85.16%), Query Frame = -1 
Query:  744 LVCLSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEM 1208
            L+ +  PEGIEALCSDLGVDYT+V+ILMLAWKLKAEKQGYFTQDEW+ GLK L VD+++KLKKAL  LE EV  P N+EDFY+YAFRYCLTE+KQK VDIESIC L++LVLG QFR Q+DS  E+LK Q DYKVIN DQW+NFLRFC+EV+  ++
Sbjct:   50 LLGMIDPEGIEALCSDLGVDYTNVKILMLAWKLKAEKQGYFTQDEWRKGLKDLQVDTINKLKKALPKLEAEVMMPENFEDFYSYAFRYCLTEDKQKCVDIESICLLIDLVLGPQFRAQVDSFSEFLKNQTDYKVINVDQWMNFLRFCQEVSFPDL 204

HSP 2 Score: 63.1586 bits (152), Expect = 1.102e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = -1 
Query:  372 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKH 485
            NF    +++SFPDLENYD  QAWP+ILDN+VEWMREK 
Sbjct:  191 NFLRFCQEVSFPDLENYDLDQAWPVILDNFVEWMREKQ 228
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: D7TZF8_VITVI (Defective in cullin neddylation protein OS=Vitis vinifera GN=VIT_09s0002g08930 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 8.092e-58
Identity = 109/155 (70.32%), Postives = 132/155 (85.16%), Query Frame = -1 
Query:  735 LSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1199
            L  PEGIE LCSD+ VD+TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D++SKLKKAL +LEKEV +PSN+ DFY+YAF+YCLTEEKQKS+DIESICELL+LVLG QF+ Q+DS +EYLK QNDYKVIN DQW+ F RFC E++  ++  +
Sbjct:   55 LIDPEGIEVLCSDVEVDHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRTDTVSKLKKALPELEKEVRRPSNFVDFYSYAFQYCLTEEKQKSIDIESICELLDLVLGSQFQAQVDSFVEYLKTQNDYKVINMDQWMGFFRFCNEISFPDLRNY 209
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: M1AUY2_SOLTU (Defective in cullin neddylation protein OS=Solanum tuberosum GN=PGSC0003DMG400011835 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.173e-57
Identity = 109/158 (68.99%), Postives = 132/158 (83.54%), Query Frame = -1 
Query:  735 LVCLSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1208
            L+ +  PEGIEALCSDLGVD+T+V+ILM AWKLKAEKQGYFTQDEW+ GLK L VD+++KLKK+L  LE EV  P N+EDFY+YAFRYCLTE+KQK VDIESIC L++LVLG QFR Q+DS  E+LK Q DYKVIN DQW+NFLRFC+EV+  ++  +
Sbjct:   50 LLGMIDPEGIEALCSDLGVDHTNVKILMFAWKLKAEKQGYFTQDEWRKGLKDLQVDTINKLKKSLPKLEAEVMMPENFEDFYSYAFRYCLTEDKQKCVDIESICLLIDLVLGPQFRAQVDSFSEFLKNQTDYKVINMDQWMNFLRFCQEVSFPDLENY 207

HSP 2 Score: 63.1586 bits (152), Expect = 1.034e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = -1 
Query:  369 NFESLLEQISFPDLENYDAIQAWPLILDNYVEWMREKHS 485
            NF    +++SFPDLENYD  QAWP+ILDN+VEWMREK +
Sbjct:  191 NFLRFCQEVSFPDLENYDLDQAWPVILDNFVEWMREKQN 229
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: B9SMU9_RICCO (Defective in cullin neddylation protein OS=Ricinus communis GN=RCOM_0471020 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.349e-57
Identity = 107/152 (70.39%), Postives = 131/152 (86.18%), Query Frame = -1 
Query:  744 LSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEM 1199
            L  PEGIE LCSD+ VD+TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D+++KLKK+L DLEKEV++PSN+ DFY+Y FRYCLTEEKQKS+DIESIC+LL+LVLG QFR Q+D  IEYLK+QNDYKV+N DQW+ F RFC E++  ++
Sbjct:   55 LIDPEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVNKLKKSLPDLEKEVKRPSNFVDFYSYGFRYCLTEEKQKSIDIESICQLLDLVLGSQFRAQVDYFIEYLKIQNDYKVVNMDQWMGFYRFCNEISFPDL 206
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A067L0J9_JATCU (Defective in cullin neddylation protein OS=Jatropha curcas GN=JCGZ_27014 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.112e-57
Identity = 107/152 (70.39%), Postives = 131/152 (86.18%), Query Frame = -1 
Query:  735 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKF 1190
            PEGIE LCSD+ VD+TDVRILMLAWK+KAEKQGYFT +EW+ GLKAL  D++SKLKKAL +LEKEV++PSN+ DFY+YAFRYCLTEEKQKS+DIESIC+L++LVLG  FR Q+D  IEYLK+QNDYKVIN DQW+ F RFC E++  ++  +
Sbjct:   58 PEGIETLCSDMEVDHTDVRILMLAWKMKAEKQGYFTLEEWRRGLKALRADTVSKLKKALPELEKEVKRPSNFVDFYSYAFRYCLTEEKQKSIDIESICQLVDLVLGSHFRAQVDYFIEYLKIQNDYKVINMDQWMGFYRFCNEISFPDLSNY 209
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: U5GTK7_POPTR (Defective in cullin neddylation protein OS=Populus trichocarpa GN=POPTR_0001s14740g PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.355e-56
Identity = 103/143 (72.03%), Postives = 125/143 (87.41%), Query Frame = -1 
Query:  762 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKE 1190
            PEGIE LCSD+ VD+TDVRILMLAWK++AEKQGYFT +EW+ GLK+L  D+++KLKK L +LEKEV++P+N+ DFYTYAFRYCLTEEKQKS+DIESIC+LL+LVLG  FR Q+D  IEYLK+Q+DYKVIN DQW+ F RFC E
Sbjct:   59 PEGIETLCSDMEVDHTDVRILMLAWKMRAEKQGYFTLEEWRRGLKSLRADTVNKLKKVLLELEKEVKRPTNFMDFYTYAFRYCLTEEKQKSIDIESICQLLDLVLGSHFRAQVDYFIEYLKIQSDYKVINMDQWMGFYRFCNE 201
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: A0A059BYQ2_EUCGR (Defective in cullin neddylation protein OS=Eucalyptus grandis GN=EUGRSUZ_F03949 PE=4 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.511e-56
Identity = 108/162 (66.67%), Postives = 132/162 (81.48%), Query Frame = -1 
Query:  714 LSSPEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKFANFIFPF 1199
            L  PEGIE LCSD+ VD+TDVRILMLAWK++AE+QGYFT DEW+ GLK+L  D+++KLKKAL +LEKEV +PSN+ DF+ Y+FRYCLTEEKQKS+DIESICELL+LVLG  +R Q+D  IEYLK Q DYKVIN DQW+ FLRFC EV LL  +   +++ P 
Sbjct:  125 LIDPEGIETLCSDMEVDHTDVRILMLAWKMRAERQGYFTLDEWRRGLKSLRADNITKLKKALPELEKEVRRPSNFVDFHAYSFRYCLTEEKQKSIDIESICELLDLVLGSLYRAQVDYFIEYLKAQTDYKVINMDQWMGFLRFCNEVLLLWAFSTVSYVTPL 286
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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Match: B9GMC8_POPTR (Defective in cullin neddylation protein OS=Populus trichocarpa GN=POPTR_0001s14740g PE=4 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.233e-56
Identity = 105/155 (67.74%), Postives = 132/155 (85.16%), Query Frame = -1 
Query:  726 PEGIEALCSDLGVDYTDVRILMLAWKLKAEKQGYFTQDEWQTGLKALGVXXXXXXXXXXXXXXXEVEKPSNYEDFYTYAFRYCLTEEKQKSVDIESICELLNLVLGVQFRPQIDSLIEYLKVQNDYKVINSDQWINFLRFCKEVNLLEMYKFANF 1190
            PEGIE LCSD+ VD+TDVRILMLAWK++AEKQGYFT +EW+ GLK+L  D+++KLKK L +LEKEV++P+N+ DFYTYAFRYCLTEEKQKS+DIESIC+LL+LVLG  FR Q+D  IEYLK+Q+DYKVIN DQW+ F RFC E++  +   F+N+
Sbjct:   59 PEGIETLCSDMEVDHTDVRILMLAWKMRAEKQGYFTLEEWRRGLKSLRADTVNKLKKVLLELEKEVKRPTNFMDFYTYAFRYCLTEEKQKSIDIESICQLLDLVLGSHFRAQVDYFIEYLKIQSDYKVINMDQWMGFYRFCNEISFPD---FSNY 210
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 22
Match NameE-valueIdentityDescription
DCNL5_RAT1.608e-1936.99DCN1-like protein 5 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL4_HUMAN1.642e-1940.14DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=... [more]
DCNL5_MOUSE1.714e-1936.99DCN1-like protein 5 OS=Mus musculus GN=Dcun1d5 PE=... [more]
DCNL5_BOVIN1.723e-1936.99DCN1-like protein 5 OS=Bos taurus GN=DCUN1D5 PE=2 ... [more]
DCNL5_HUMAN1.897e-1936.99DCN1-like protein 5 OS=Homo sapiens GN=DCUN1D5 PE=... [more]
DCNL4_MOUSE5.973e-1939.73DCN1-like protein 4 OS=Mus musculus GN=Dcun1d4 PE=... [more]
DCNL5_PONAB1.043e-1836.30DCN1-like protein 5 OS=Pongo abelii GN=DCUN1D5 PE=... [more]
DCNL4_DANRE1.220e-1839.46DCN1-like protein 4 OS=Danio rerio GN=dcun1d4 PE=3... [more]
DCN1M_DICDI1.832e-1637.93DCN1-like protein 2 OS=Dictyostelium discoideum GN... [more]
DCNL3_RAT1.920e-1034.04DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0093379 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M0RKZ1_MUSAM2.432e-5968.71Defective in cullin neddylation protein OS=Musa ac... [more]
B9IMH9_POPTR3.781e-5968.75Defective in cullin neddylation protein OS=Populus... [more]
K4CAX8_SOLLC1.261e-5872.26Defective in cullin neddylation protein OS=Solanum... [more]
D7TZF8_VITVI8.092e-5870.32Defective in cullin neddylation protein OS=Vitis v... [more]
M1AUY2_SOLTU1.173e-5768.99Defective in cullin neddylation protein OS=Solanum... [more]
B9SMU9_RICCO2.349e-5770.39Defective in cullin neddylation protein OS=Ricinus... [more]
A0A067L0J9_JATCU3.112e-5770.39Defective in cullin neddylation protein OS=Jatroph... [more]
U5GTK7_POPTR1.355e-5672.03Defective in cullin neddylation protein OS=Populus... [more]
A0A059BYQ2_EUCGR1.511e-5666.67Defective in cullin neddylation protein OS=Eucalyp... [more]
B9GMC8_POPTR2.233e-5667.74Defective in cullin neddylation protein OS=Populus... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005176Potentiating neddylation domainPFAMPF03556Cullin_bindingcoord: 57..153
e-value: 1.6E-15
score: 57.5
IPR005176Potentiating neddylation domainPROSITEPS51229DCUN1coord: 1..170
score: 28.284
IPR014764Defective-in-cullin neddylation proteinPANTHERPTHR12281RP42 RELATEDcoord: 4..148
NoneNo IPR availablePANTHERPTHR12281:SF12DEFECTIVE IN CULLIN NEDDYLATION PROTEINcoord: 4..148

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0093379 ID=g.barbadense_cottongen_reftransV1_0093379; Name=g.barbadense_cottongen_reftransV1_0093379; organism=Gossypium barbadense; type=contig; length=2972bp
CCTTCATTGAGTAACAAATCTTTTTCTTTTCTTTATTTTTTTTTGCTTAA
AATAACAAACTGTAAAAAGGAAAAAGGAACTATTAATGAATGCTGAATGT
ATAAACCATCGGAGGACAACAAAATTGCAGCTTTAACCAGAGAAAAAGGT
TCAGTAAAATCAGTTTAATCAGTTATGATATGAGCCAAGCTCCAAGGTTG
CTGTGGTTAGGTTTTCCACAAGGTCTTGTCCTGTCGACAAATTAATCAAA
ATGAAAATTTTATAGTTCTTTAATACATTCAAGGGCATAACATCTAAGGG
ACACACAGAGAAAGCATTTACCATATGAAATCAGCAATCTGCAAGACATA
CAAAAAATGGCAACACTAGCTATGCTTTTCTCTCATCCATTCAACATAAT
TATCAAGGATCAAGGGCCAAGCTTGGATTGCATCATAGTTTTCAAGATCT
GGAAAGCTAATCTGTTCTAGCAAAGATTCAAAGTTATTATAGATGCCTCA
AGGTTGCTTGAGGAAAAAGAAAATTATGATAATAAAAGAAACTAATGCCT
TTTCATCAAATATCAAGTACATACGTCAAGCATGTGAAATCTAGCATGTA
TTATTCATATTTTTACATGTCATTTTCTTTTCTTAGTTTTTCTTCATTCT
GGCAGCCAACACTGACTTCCAATGCAGATGGAAAGAAACTTTATGGTATT
GAGTTATGGCGGCAAATGGGAAAATAAAATTAGCAAACTTGTACATTTCC
AAAAGGTTTACCTCCTTGCAAAAACGTAGAAAATTTATCCACTGGTCTGA
ATTTATTACTTTGTAATCATTCTGGACCTTCAGATATTCAATTAGTGAAT
CAATCTGAGGACGAAATTGAACCCCTAGAACAAGATTCAACAATTCACAG
ATGCTTTCTATGTCCACACTCTTTTGCTTCTCCTCTGTCAAACAGTATCG
AAATGCATAGGTATAGAAATCCTCATAATTGGATGGCTTCTCCACCTCTT
TCTCCAAATCAGAGAGCGCCTTCTTTAGTTTGCTAAGTGAATCAACCCCC
AATGCTTTAAGGCCTGTTTGCCACTCATCCTGGGTAAAATAGCCCTGCTT
TTCAGCTTTTAGTTTCCAAGCGAGCATCAATATCCTGACATCAGTGTAGT
CCACTCCTAGATCTGAACAGAGTGCTTCAATACCTTCTGGACTGCTCAAG
CAAACTAAGGGTATTAAAAAAAAGATATGTATGTAATTCTGTAAAGAAAA
TCATTCTTTGTGCATCCATGGGACTTGTCTTCAATTGTTTCATACAAATT
AGGTTTGCATCTGTGTGACCTCACATCAAACTAATCAGACAAAAGGAAGT
CCTAAGCATTTGTCGGTAAGTACCATGATATGAAATATAACTCTATGTAT
CATGCAATAACATATGAGACATTATGTTCAAACAACAATTATGAATAATG
TAATTCCTTTAAGAACCAAAAGCTGAGAGAGATGCTTGACCTTGAAAAAT
GATAGCAGCATGATTTGGATAAGTATAATAATTTTATTTGACATTTTCTT
TTGTATTTATAAATAATTACACCAATTGATCATTGAGCAAGAGCAAGAAG
TTCATATCACCATATCAGTAACTCTAAAAATATAAAAGAATGCAGACAAT
AAGTACTTACTCAATCATGCCAAAGGAACTATTTGCATATGTATTGAACA
AGCGATCTATTTTTTCCAGCCCCTTTATTTTAGCTTTACTTGAGACTGAA
ACAAAGAGTAGCATTATCTAATAAGAATACCGGGCACCTCACAAGAAAAA
CCCGAAAACTTAGTCGATTAAATATTAGGGGACCATCATTACCATTACTG
TATCCAACTAACATTCAAGTCAGATAGCAATTTGAATGCCGGTTCATGTC
ATTTTCAGAAGCAAACGTCATGCAATTAATTCTCTATAAAAATTATCAAT
ATTCTACATATCAACCTTCTCAGAATGCCACTTTAGTTATTATTAAACCC
TATAAGGCTATTCACACACCAGTTAGGGGACCGAAAAGACACGAATCCTA
CTGACAACAGGAAAACGAGTCCAAGTTGGGCTCATTACATGGAGAACCAT
CATGAACAAAAAGCAAAATCCTTTTCAATAGTTTGAACCTATGTCTTCCT
CACTCCTAGCATTAACTTTCAGCTCTAATGCTAAAAGGCCCTATTTTTTA
TCTCCCTCATACGCTATTTTCCCTAACTTGCTGTGAAAAAGAACCTGTAA
TATTAATTATAATATTGATAAATCCCAGGAGATATGTTCAATAATTCAAT
CAAAGAACGAATCAGATTTATATGGCCATCGATTGATTTAGACTGTATCC
TAAGAAGCTTCCTAGCCTAAAAAAGGAGAAGATTTAACAGAAGATGATTA
AAATATAGTTAGTGCACAATTCTTCAATTTAACGTATTCTCTTTTCCCGC
GGTTTCTGAGAAGCTAATCTGAGTGGAGCAGTCGTCATTCACACACCGAC
AAACCAAAATAAAATAAAAGAGAGTAAATAACAATGATTACTGTTAAGAA
ATAATGGGGTATTGTACGATTTTCGCTTAAATTCTTTTACTTTCATTGAT
CTTTTTCCCGCGCTTTCTCGGTTACCAAACAATAAAACACATAAAAATCA
CTTTTTTTAAGGGAAAAAATAAAATAAGAAAAGGAGAGGGATGTACCAGA
ACGACCGTCGGATGACGTGACGGATGAGGAATTGGGTGGGGCAGATTTAC
GCTTAGATGCGCGGGGAGGCATTGGTGACAAAAGAGATCGGACTGAAGCC
AATGATGGAACAACCACAGCCACTCGATTTGATGACCAATGACCAATTGA
CTGAAGAGGAAAAAGAAACCCAGAACCCTAGATCCAATGATATTTAGAGA
GAGGCAGCGAGACTGTACTAACACAACAGACTAACACAAGATAGAGATAG
AGATAGAGATAGAGATATAATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR005176PONY_dom
IPR014764DCN-prot