g.barbadense_cottongen_reftransV1_0093258, g.barbadense_cottongen_reftransV1_0093258 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0093258
Unique Nameg.barbadense_cottongen_reftransV1_0093258
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2307
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Dt12chromosomeg.barbadense_cottongen_reftransV1_0093258:1..2307 .
Dt12:61947938..61952285 +
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RAT (Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 2.135e-69
Identity = 86/154 (55.84%), Postives = 110/154 (71.43%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGL-ISKSKAGEKYGN----YVLQFADDFSYTDPV--SISSLQ 441
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +          + D++K+HW  +GRNFF+RYDYEE E+EGANKM++ L  L + +S  G+++      Y ++ AD+F Y+DPV  SIS  Q
Sbjct:  344 VANATKIASYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------RVEDILKDHWQKFGRNFFTRYDYEEVEAEGANKMMKDLEALMLDRSFVGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQ 488          

HSP 2 Score: 113.235 bits (282), Expect = 2.135e-69
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGS++  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E DA+K + D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDAAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_BOVIN (Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.895e-69
Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLIS-KSKAGEKYG----NYVLQFADDFSYTDPV--SISSLQ 441
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +         S+ D++K+HW  YGRNFF+RYDYEE E+EGANKM++ L  LIS +S  G+++      Y ++  D+F Y+DPV  SIS  Q
Sbjct:  344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVGDKVYTVEKIDNFEYSDPVDGSISRNQ 488          

HSP 2 Score: 108.227 bits (269), Expect = 4.895e-69
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGS++  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K   D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSISRNQGLRLLFADGSRIIFRLSGTGSAGATIRLYIDSYEKDLAKIYQDPQVMLAPLISIALKVSQLQEKTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RABIT (Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=PGM1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.659e-68
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN----YVLQFADDFSYTDPV 423
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +         S+ D++K+HW  +GRNFF+RYDYEE E+EGA KM++ L  L+  +S  G+++      Y ++ AD+F Y DPV
Sbjct:  344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPV 480          

HSP 2 Score: 111.309 bits (277), Expect = 2.659e-68
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSV+  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K + D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM_RHIRD (Phosphoglucomutase OS=Rhizobium radiobacter GN=pgm PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.455e-65
Identity = 83/144 (57.64%), Postives = 107/144 (74.31%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPVSIS 432
            VAEKLGL  +E PTGWKFFGNLMDAGK++ICGEESFGTGS+H+REKDG+WAVL WL+I+A R +         S+ D+V +HWA YGRN++SR+DYEE +S+ AN ++  LR  ++ +  G  YGN  +  ADDF+Y DPV  S
Sbjct:  330 VAEKLGLGMYETPTGWKFFGNLMDAGKVTICGEESFGTGSNHVREKDGLWAVLYWLNIVAARKE---------SVKDIVTKHWAEYGRNYYSRHDYEEVDSDAANTLVAILREKLA-TLPGTSYGNLKVAAADDFAYHDPVDQS 463          

HSP 2 Score: 94.3597 bits (233), Expect = 1.455e-65
Identity = 43/83 (51.81%), Postives = 63/83 (75.90%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VD SV+  QG+R +F  GSRI+ RLSGTG+AGAT+R+Y+E++EPDA++H ++ Q AL  LI +A +++ +K  T   +PTVIT
Sbjct:  460 VDQSVSKNQGIRILFEGGSRIVLRLSGTGTAGATLRLYVERYEPDAARHGIETQSALADLISVADTIAGIKAHTADSEPTVIT 542          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_DICDI (Phosphoglucomutase-1 OS=Dictyostelium discoideum GN=pgmA PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.731e-65
Identity = 86/156 (55.13%), Postives = 109/156 (69.87%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN------YVLQFADDFSYTDPV--SISSLQ 441
            VA  L + FFEVPTGWKFFGNLMDAG LSICGEESFGTGSDHIREKDGIWA++ WL I+ + N+     +  VSI ++VK+HWA YGRN++SRYDYEE ++  A  M++++   I SK   G+K+        Y +   DDF Y DP+  S+SS Q
Sbjct:  343 VATDLKVPFFEVPTGWKFFGNLMDAGTLSICGEESFGTGSDHIREKDGIWAIICWLQILTHHNQSTN-DKNFVSIEEIVKQHWAKYGRNYYSRYDYEEIDTAPAEAMMKHVSQQIESKQLIGKKFTGISDSLEYEIASCDDFEYKDPIDSSVSSHQ 497          

HSP 2 Score: 99.7525 bits (247), Expect = 2.731e-65
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLAL-SVSKLKDFTGREKPTVIT 749
            +D SV+S QG+R +FTDGSRII+RLSGTGS GATVR+Y +++E   ++ + D Q  LK LI +AL  +SKL  +TGR +P VIT
Sbjct:  489 IDSSVSSHQGLRIIFTDGSRIIYRLSGTGSTGATVRVYFDKYETQPTQLNNDVQTHLKSLIHIALVEISKLNHYTGRNEPNVIT 572          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: D7T1T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02320 PE=4 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.309e-115
Identity = 136/149 (91.28%), Postives = 141/149 (94.63%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV--SISSLQ 441
            VAEKL L FFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKL S++DVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLR L+SKSKAGEKYGNY LQFADDFSYTDPV  S++S Q
Sbjct:  392 VAEKLTLPFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLASVADVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRDLVSKSKAGEKYGNYALQFADDFSYTDPVDGSVASKQ 540          

HSP 2 Score: 160.229 bits (404), Expect = 1.309e-115
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSVASKQGVRFVFTDGSRII+RLSGTGSAGATVRIYIEQFEPD SKH+MDAQ ALKPLIDLALS+SKLKDFTGREKPTVIT
Sbjct:  532 VDGSVASKQGVRFVFTDGSRIIYRLSGTGSAGATVRIYIEQFEPDVSKHEMDAQAALKPLIDLALSLSKLKDFTGREKPTVIT 614          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: D7MLB3_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496395 PE=4 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 6.473e-115
Identity = 168/320 (52.50%), Postives = 224/320 (70.00%), Query Frame = -1
Query: 1054 TVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLD---TNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIAS 2004
            T + DPY  L I +NP+GS+TR+   FP  +ATPDP P  P +SKD+ +NQ+  TW R++LP     D   + K PL+VYYH GGFI CS     FH FCS MA  L AIVVS  YRLAPEHRLPAAYDD +EAL WIKT+ +EW+  +A+F+  F+MG+S+G N+AY+ G+R A+    L P +IRGLILH PFFGG  +  SE+RLVND V PP V D+MW+L+LP+GVDRDHEY NPT   G+  +EK   + WKV++ G + DP+IDRQ ++ K M+++GV++V H+ +G  HG +  +P K   LFL +K+FI+S
Sbjct:    6 TPISDPYAFLNIVKNPDGSITRDLTNFPCAAATPDPTPENPAVSKDLPVNQSKSTWLRLYLPSSAVNDGVSSQKLPLVVYYHGGGFILCSVDMQPFHDFCSEMARDLNAIVVSPSYRLAPEHRLPAAYDDGMEALEWIKTSDDEWIKSHADFSKVFLMGTSAGGNLAYNVGLRSADSVSDLNPLQIRGLILHHPFFGGEERCGSEIRLVNDQVCPPIVTDVMWDLSLPVGVDRDHEYSNPTVGDGSEDLEKFGRLRWKVMMIGGEDDPMIDRQRDVAKLMKKRGVELVEHYTVGHVHGAEIGEPSKRKTLFLSIKNFISS 325          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: W9SJT4_9ROSA (Phosphoglucomutase OS=Morus notabilis GN=L484_002800 PE=4 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.109e-114
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV--SISSLQ 441
            VAEKL L FFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKL+S++DVVKEHWATYGRNFFSRYDYEECESEGANKMI+YLR LISKSK G+KYGNYVLQ ADDF+YTDPV  S++S Q
Sbjct:  380 VAEKLSLPFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLISVADVVKEHWATYGRNFFSRYDYEECESEGANKMIDYLRDLISKSKPGDKYGNYVLQVADDFTYTDPVDSSVASKQ 528          

HSP 2 Score: 160.999 bits (406), Expect = 1.109e-114
Identity = 78/83 (93.98%), Postives = 82/83 (98.80%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VD SVASKQGVRFVFTDGSRIIFRLSGTGSAGAT+R+YIEQFEPDASKHD+DAQ+ALKPLIDLALSVSKLKDFTGREKPTVIT
Sbjct:  520 VDSSVASKQGVRFVFTDGSRIIFRLSGTGSAGATIRVYIEQFEPDASKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT 602          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: B9I4H0_POPTR (Phosphoglucomutase family protein OS=Populus trichocarpa GN=POPTR_0012s14030g PE=4 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 4.126e-114
Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV 423
            VAEKL L FFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVS++DVVKEHWATYGRNFFSRYDYEECESEGANKMI+YLR L+SKSK G+KYGNY LQFADDF+YTDPV
Sbjct:  409 VAEKLNLPFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSVADVVKEHWATYGRNFFSRYDYEECESEGANKMIQYLRDLVSKSKPGDKYGNYTLQFADDFTYTDPV 549          

HSP 2 Score: 159.458 bits (402), Expect = 4.126e-114
Identity = 76/83 (91.57%), Postives = 81/83 (97.59%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSV SKQG+RFVFTDGSRIIFRLSGTGSAGATVRIY+EQFEPD SKH+MDAQ+ALKPLIDLALSVSKLKDFTGR+KPTVIT
Sbjct:  549 VDGSVVSKQGIRFVFTDGSRIIFRLSGTGSAGATVRIYVEQFEPDVSKHEMDAQIALKPLIDLALSVSKLKDFTGRDKPTVIT 631          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A061G7L2_THECC (Phosphoglucomutase isoform 1 OS=Theobroma cacao GN=TCM_015041 PE=4 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 4.265e-114
Identity = 133/149 (89.26%), Postives = 140/149 (93.96%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV--SISSLQ 441
            VAEKL LTFFEVPTGWKFFGNLMD GKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGE LVS+SDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLR L+SK+K G KYG+YVLQFADDF+YTDPV  S++S Q
Sbjct:  417 VAEKLSLTFFEVPTGWKFFGNLMDDGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGETLVSVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRDLVSKNKEGAKYGDYVLQFADDFAYTDPVDGSVASKQ 565          

HSP 2 Score: 161.77 bits (408), Expect = 4.265e-114
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGAT+RIYIEQFEPD SKHDMDAQVALK LIDLALSVSKLKDFTGREKPTVIT
Sbjct:  557 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATIRIYIEQFEPDVSKHDMDAQVALKRLIDLALSVSKLKDFTGREKPTVIT 639          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PGM1_RAT2.135e-6955.84Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 ... [more]
PGM1_BOVIN4.895e-6957.79Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV... [more]
PGM1_RABIT2.659e-6856.16Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=P... [more]
PGM_RHIRD1.455e-6557.64Phosphoglucomutase OS=Rhizobium radiobacter GN=pgm... [more]
PGM1_DICDI2.731e-6555.13Phosphoglucomutase-1 OS=Dictyostelium discoideum G... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
D7T1T9_VITVI1.309e-11591.28Putative uncharacterized protein OS=Vitis vinifera... [more]
D7MLB3_ARALL6.473e-11552.50Putative uncharacterized protein OS=Arabidopsis ly... [more]
W9SJT4_9ROSA1.109e-11489.26Phosphoglucomutase OS=Morus notabilis GN=L484_0028... [more]
B9I4H0_POPTR4.126e-11492.20Phosphoglucomutase family protein OS=Populus trich... [more]
A0A061G7L2_THECC4.265e-11489.26Phosphoglucomutase isoform 1 OS=Theobroma cacao GN... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013094Alpha/beta hydrolase fold-3PFAMPF07859Abhydrolase_3coord: 88..308
e-value: 4.8E-47
score: 160.4
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 6..329
e-value: 7.7E-70
score: 235.1
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 46..322
NoneNo IPR availablePANTHERPTHR23024:SF173SUBFAMILY NOT NAMEDcoord: 18..341
NoneNo IPR availablePANTHERPTHR23024MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMEScoord: 18..341
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0093258 ID=g.barbadense_cottongen_reftransV1_0093258; Name=g.barbadense_cottongen_reftransV1_0093258; organism=Gossypium barbadense; type=contig; length=2307bp
GTTGCTGAAAAATTGGGTCTTACCTTTTTTGAGGTTCCTACTGGCTGGAA
ATTTTTTGGGAATCTTATGGATGCTGGAAAGTTGTCAATTTGTGGGGAAG
AAAGTTTTGGTACGGGTTCAGATCACATTCGTGAGAAGGATGGCATATGG
GCTGTTTTAGCATGGCTCTCGATTATTGCATATCGAAACAAAGACAAGAA
ACCAGGGGAGAAATTGGTATCTATCTCTGATGTTGTCAAAGAACACTGGG
CAACTTATGGAAGAAATTTCTTTTCTAGATATGATTACGAAGAATGTGAA
TCTGAAGGTGCCAATAAAATGATCGAATACCTTAGAGGACTAATCTCAAA
GAGTAAGGCAGGTGAAAAGTATGGAAATTATGTCCTTCAATTTGCTGATG
ACTTTTCATATACCGATCCCGTAAGTATTAGCTCTCTACAATTTTCGTAC
AATTGATATCCTTCAACAAATTGCTATATATTATCCGTCTGTTTTCTTAG
GTGGATGGAAGTGTGGCCTCAAAGCAGGGTGTTCGATTTGTTTTCACAGA
TGGTTCAAGGATTATATTCCGTTTATCTGGAACTGGCTCAGCTGGTGCAA
CGGTTCGAATCTACATTGAGCAATTTGAACCAGATGCTTCTAAACATGAC
ATGGACGCCCAAGTGGCATTAAAACCATTAATAGATTTGGCATTGTCTGT
ATCGAAGCTGAAGGACTTCACAGGCAGGGAGAAACCTACAGTCATCACAT
AAAAAAGCGACACTCATATTGAGCCCCTCCCCTATGAATTCCCACTTTTA
TTGAGTCATCTTTCAGTTTTGTTTTTAATGCTATAGTTAGCTTGGCATTA
TGTAAATTTATGTAAAATACTTGGAAGGAATAAATTAAAAGCATCTAGCT
AAAATATTCTGGTGAAATAAAAATATTTCAAGAGTTTACTTTTTTAGGAC
CACTAGTAAGATAATCCACTGCTCTGTACGTACATACCATTATTGCATGA
TAAAGATAGCTATAAATTCATTCAACATTTGCATTTATTGTAACTGACGT
TGCAGATGCAATAAAATCCTTCAAGACCAAAAACAGTGCGTTGGCCTTAT
CAGGCTGCATAAAATCCACTCCATGATGATCCCCCATACGAAAATGGCTC
ACTACCTTTACACCCTTTTCTTCCATTGATTTTACGAGCTCCACCTGACG
GTCGATTAAAGGGTCGCCGTCACAGCCGGTCACCAACACTTTCCATCCTA
CTGCAGCGAGCTTCTCCATAAGGTTTGTCCCCTTGGTTGTTGTTGGATTA
CAGTACTCGTGGTCACGGTCAACTCCGATTGGCAACGCCAGTTCCCACAT
CAGGTCCCCCACACCAGGAGGCAATACGGGATCATTAACCAATCTTAACT
CTGACTCAACCTTTACGGACCCGCCGAAGAATGGTTGGTGCAATATTAGC
CCTCGGATCTTCCAGGGTCGAAGACCGTCGGCTTCTTCCGCCACACGTAT
TCCTGCATGGTAGGCTATGTTAGCACCTGAACTCGACCCCATAACGAAAC
AAGTGGTGAAATTTGCGTATTGTGTCAACCACTCTTCTTGGGTGGTTTTG
ATCCAGAGCAACGCTTCAATAGCGTCGTCGTAAGCAGCAGGAAGCCTATG
CTCAGGAGCAAGACGATAGTCGACGGACACGACGATGGCTTGGAGTTTCA
ACGCCATGTTTGAGCAAAAAACATGGAAGATCGTGGATGCCGCACTGCAG
TGGATGAAGCCTCCTGCATGGTAATAAACTATGAGAGGGAACTTGTTCGT
ATCAAGCGGCTTCTGCCTGGGGAGGAACACACGAGCCCATGTGTGTGTCG
TTTGGTTGATAGTGACATCTTTGGAGAGAACCGGGACAGTTGGGTCCGGA
TCAGGTGTGGCTGAAGTGTTGGGAAACCTATTAGGGTTGCGCGTAAGCGA
GCCATTGGGGTTACGAGTGATTTCTAGGCGCTTGTAAGGATCATCAACGA
CAGTGGGATTGGAAGAAGGGGTTGCTTTTGTTTGATCCGACATCACCGGA
GCCCTCGGTTGAGGTCTTTTGTTCTGGTTTTTTCAACTTTGGGTTTCCTA
TGAAGATAAATATAGAGAGAGATTTCTTGGGTAAGCAGTAAGCAATTACT
GGATAGTTTTCATGATGGCTGCCGGGTTATCAGTAGACTTGGTTTTGTTT
GTCAAACAAGTTACCTATTTTAAAACTAGAAATTCATTGGGATGAATTGA
CGTTTAGGGAGAACGAATGGCTAATTTTGAAAGTTTCAATGAAGCTTCAT
TTATGCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR013094AB_hydrolase_3
IPR029058AB_hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process