g.barbadense_cottongen_reftransV1_0093258, g.barbadense_cottongen_reftransV1_0093258 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0093258
Unique Nameg.barbadense_cottongen_reftransV1_0093258
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2307
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt12chromosomeg.barbadense_cottongen_reftransV1_0093258:1..2307 .
Dt12:61947938..61952285 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RAT (Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 2.135e-69
Identity = 86/154 (55.84%), Postives = 110/154 (71.43%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGL-ISKSKAGEKYGN----YVLQFADDFSYTDPV--SISSLQ 441
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +          + D++K+HW  +GRNFF+RYDYEE E+EGANKM++ L  L + +S  G+++      Y ++ AD+F Y+DPV  SIS  Q
Sbjct:  344 VANATKIASYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------RVEDILKDHWQKFGRNFFTRYDYEEVEAEGANKMMKDLEALMLDRSFVGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQ 488          

HSP 2 Score: 113.235 bits (282), Expect = 2.135e-69
Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGS++  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E DA+K + D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDAAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_BOVIN (Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.895e-69
Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLIS-KSKAGEKYG----NYVLQFADDFSYTDPV--SISSLQ 441
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +         S+ D++K+HW  YGRNFF+RYDYEE E+EGANKM++ L  LIS +S  G+++      Y ++  D+F Y+DPV  SIS  Q
Sbjct:  344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVGDKVYTVEKIDNFEYSDPVDGSISRNQ 488          

HSP 2 Score: 108.227 bits (269), Expect = 4.895e-69
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGS++  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K   D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSISRNQGLRLLFADGSRIIFRLSGTGSAGATIRLYIDSYEKDLAKIYQDPQVMLAPLISIALKVSQLQEKTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RABIT (Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=PGM1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.659e-68
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN----YVLQFADDFSYTDPV 423
            VA    +  +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R +         S+ D++K+HW  +GRNFF+RYDYEE E+EGA KM++ L  L+  +S  G+++      Y ++ AD+F Y DPV
Sbjct:  344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPV 480          

HSP 2 Score: 111.309 bits (277), Expect = 2.659e-68
Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSV+  QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K + D QV L PLI +AL VS+L++ TGR  PTVIT
Sbjct:  480 VDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM_RHIRD (Phosphoglucomutase OS=Rhizobium radiobacter GN=pgm PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.455e-65
Identity = 83/144 (57.64%), Postives = 107/144 (74.31%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPVSIS 432
            VAEKLGL  +E PTGWKFFGNLMDAGK++ICGEESFGTGS+H+REKDG+WAVL WL+I+A R +         S+ D+V +HWA YGRN++SR+DYEE +S+ AN ++  LR  ++ +  G  YGN  +  ADDF+Y DPV  S
Sbjct:  330 VAEKLGLGMYETPTGWKFFGNLMDAGKVTICGEESFGTGSNHVREKDGLWAVLYWLNIVAARKE---------SVKDIVTKHWAEYGRNYYSRHDYEEVDSDAANTLVAILREKLA-TLPGTSYGNLKVAAADDFAYHDPVDQS 463          

HSP 2 Score: 94.3597 bits (233), Expect = 1.455e-65
Identity = 43/83 (51.81%), Postives = 63/83 (75.90%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VD SV+  QG+R +F  GSRI+ RLSGTG+AGAT+R+Y+E++EPDA++H ++ Q AL  LI +A +++ +K  T   +PTVIT
Sbjct:  460 VDQSVSKNQGIRILFEGGSRIVLRLSGTGTAGATLRLYVERYEPDAARHGIETQSALADLISVADTIAGIKAHTADSEPTVIT 542          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_DICDI (Phosphoglucomutase-1 OS=Dictyostelium discoideum GN=pgmA PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.731e-65
Identity = 86/156 (55.13%), Postives = 109/156 (69.87%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN------YVLQFADDFSYTDPV--SISSLQ 441
            VA  L + FFEVPTGWKFFGNLMDAG LSICGEESFGTGSDHIREKDGIWA++ WL I+ + N+     +  VSI ++VK+HWA YGRN++SRYDYEE ++  A  M++++   I SK   G+K+        Y +   DDF Y DP+  S+SS Q
Sbjct:  343 VATDLKVPFFEVPTGWKFFGNLMDAGTLSICGEESFGTGSDHIREKDGIWAIICWLQILTHHNQSTN-DKNFVSIEEIVKQHWAKYGRNYYSRYDYEEIDTAPAEAMMKHVSQQIESKQLIGKKFTGISDSLEYEIASCDDFEYKDPIDSSVSSHQ 497          

HSP 2 Score: 99.7525 bits (247), Expect = 2.731e-65
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLAL-SVSKLKDFTGREKPTVIT 749
            +D SV+S QG+R +FTDGSRII+RLSGTGS GATVR+Y +++E   ++ + D Q  LK LI +AL  +SKL  +TGR +P VIT
Sbjct:  489 IDSSVSSHQGLRIIFTDGSRIIYRLSGTGSTGATVRVYFDKYETQPTQLNNDVQTHLKSLIHIALVEISKLNHYTGRNEPNVIT 572          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A0D2UB73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G282100 PE=4 SV=1)

HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0
Identity = 336/341 (98.53%), Postives = 337/341 (98.83%), Query Frame = -1
Query: 1021 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE 2043
            MSDQTK  PSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMAL+LQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIG DRDHEYCNPTTTKGTNL EKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE
Sbjct:    1 MSDQTKTVPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALELQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGADRDHEYCNPTTTKGTNLTEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE 341          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A061G0D6_THECC (Carboxyesterase 20, putative OS=Theobroma cacao GN=TCM_015038 PE=4 SV=1)

HSP 1 Score: 523.857 bits (1348), Expect = 2.189e-172
Identity = 251/333 (75.38%), Postives = 283/333 (84.98%), Query Frame = -1
Query: 1045 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2043
            MS QT A+PS NP +VDDPYKRLEI  N +GSLTRNP+R+PNTSATPDP   +PVLSKD+TINQ+ + WAR+FLPRQ    ++K PLIVYYHAGGFIHCSAASTIFHVFCSNMAL+LQAI+VSVDYRLAPE+RLPAAYDDA+EAL W+KTT E+WL + A+   CF+MGSSSGANIAY AG+R AEEAD     KIRGLILHQPFFGGS KVESELRLVNDP+L PGV DLMWELALPIG DRDH YCNP   K + +++KL +VGW VLVTGCDGDPLIDRQV LVK MEEKG+KVVS FR GDHHGVDFMQP KA ALFLVLK+FI SA++
Sbjct:    1 MSSQT-ASPS-NPIIVDDPYKRLEIILNSDGSLTRNPDRYPNTSATPDPKQPIPVLSKDITINQSNNIWARIFLPRQALHTSSKLPLIVYYHAGGFIHCSAASTIFHVFCSNMALELQAIIVSVDYRLAPENRLPAAYDDAMEALHWVKTTPEDWLKRCADLANCFLMGSSSGANIAYRAGLRSAEEADDREALKIRGLILHQPFFGGSEKVESELRLVNDPILRPGVSDLMWELALPIGADRDHAYCNPAAGKTSKVLDKLVSVGWMVLVTGCDGDPLIDRQVGLVKLMEEKGMKVVSEFRAGDHHGVDFMQPAKARALFLVLKEFILSASA 331          

HSP 2 Score: 397.897 bits (1021), Expect = 7.438e-124
Identity = 194/328 (59.15%), Postives = 242/328 (73.78%), Query Frame = -1
Query: 1039 VDDPYKRLEITRNPNGSLTRNPNRFPNTSATP-DPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTN-------KFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVT 1998
            + DP++ L+I  NP+G+LTRN    P   A P DP+   PVLSKDV IN +  TWAR+FLPRQ  LD         K PL+VYYH GGF+  SA   I H FCSNM+  + AIVVSVDYRLAPE+RLPAAYDD +EAL WIKTT +EWL +YA+ + CF+MGSS+G NIAYH G+R AE    L P KI+GL+LHQPFFGG+ ++ SELRL+NDPVLPP V D+MW+L+LPIGVDRDHEYCNPT   G+  +EK+ ++GWKVLV G DGDPLIDRQ+EL+K +E KGV+VV + R+G  HG + M   KA+A+ +V+KDFI S+  V 
Sbjct:  344 ITDPFEYLQIVLNPDGTLTRN-LMIPRVVAEPNDPEGQAPVLSKDVPINPSNRTWARIFLPRQA-LDCTSSSANKLKLPLVVYYHGGGFVLLSADMGICHDFCSNMSKAIPAIVVSVDYRLAPENRLPAAYDDGLEALHWIKTTGDEWLREYADLSNCFLMGSSAGGNIAYHVGLRAAEVVHELEPLKIKGLVLHQPFFGGTQRIASELRLMNDPVLPPIVSDVMWDLSLPIGVDRDHEYCNPTADGGSKELEKIKSLGWKVLVYGSDGDPLIDRQIELLKLVEGKGVQVVRNVRVGGFHGEEEMDVSKAHAMHMVVKDFIMSSKQVA 669          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: B9ID20_POPTR (Putative esterase family protein OS=Populus trichocarpa GN=POPTR_0015s13770g PE=4 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 9.484e-137
Identity = 195/334 (58.38%), Postives = 251/334 (75.15%), Query Frame = -1
Query: 1051 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLD---TNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASA 2043
            MS QT     SNPT+ D PY+ ++I  N +G++TR+PNR+PN+S +PDP    PVLSKD+ +NQ+  TW R+FLPRQ  +D   T+K PLIVY+H GGFI+CSA+ST+FH FCS+M L L  ++VSVDYRLAPEHRLPAAYDDA+E L WIKTTQE+WL +Y +++ CF+MGSS+GAN AYHAG+  ++EAD L P KI+GLILH PF GG  +  SE++LVN+P LP  + DLMW LALP+GVDRDHEYCNP    G+ L + +  +GWKV+VTGCDGDP+IDRQ+E V  +  K V+VV HF  G +H V+  +P KA AL  +LKDF+  A
Sbjct:    1 MSGQTSP---SNPTITD-PYQHIQIIPNHDGTITRDPNRYPNSSPSPDPKDPTPVLSKDIIVNQSEKTWVRIFLPRQTIVDSSSTSKLPLIVYFHGGGFINCSASSTVFHDFCSSMVLDLHVVIVSVDYRLAPEHRLPAAYDDAMEVLQWIKTTQEDWLREYVDYSRCFLMGSSAGANAAYHAGLCASQEADNLVPLKIKGLILHHPFIGGVQRTGSEVKLVNEPHLPLCINDLMWNLALPLGVDRDHEYCNPMVDGGSKLWKNVRLLGWKVMVTGCDGDPMIDRQMEFVDMLVTKDVRVVGHFSTGGYHVVELKEPSKAKALHALLKDFMLDA 330          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: M5X4Q4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026008mg PE=4 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.577e-127
Identity = 193/336 (57.44%), Postives = 246/336 (73.21%), Query Frame = -1
Query: 1060 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPR----QKP----LDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFI 2043
            M+DQT A+  SNPTV  DPY  L+I  NP+ ++TR    +PN+  T D +   PVLSKD+ INQ+ +TW R+FLPR    Q P      T K PL+++YH GGFI  SA STIFH FC N+A+ +  ++ SVDYRLAPEHRLPAAYDDA+EAL WIKT Q++WLT YA+ + CF+MGSS+G NIAYHAG+R     D L+P KIRGLIL QPFFGG+ +  SEL + NDPVLP    DLMW+L+LP G DRDHEYCNPT   G+  ++++ A+GW+VLVTGCDGDPL+DRQ+ELVK +EEKGV+VV  F  G +HGV+ ++  KA+ LF+V + FI
Sbjct:    1 MADQTAAS-HSNPTV--DPYHHLQIAPNPDDTITRLA-EYPNSPPTCDSNLPTPVLSKDIPINQSNNTWVRLFLPRHVLDQSPSPTATPTTKLPLVIFYHGGGFIILSAGSTIFHDFCVNLAIDVPVVIASVDYRLAPEHRLPAAYDDAMEALHWIKTAQDDWLTDYADLSNCFLMGSSAGGNIAYHAGLRAVVGVDHLKPLKIRGLILQQPFFGGTQRSGSELSMANDPVLPLSCCDLMWDLSLPRGFDRDHEYCNPTVGGGSKHLDEIKALGWRVLVTGCDGDPLMDRQIELVKMLEEKGVQVVGRFIQGGYHGVEDVELSKAHELFVVFRSFI 332          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: B9R9J9_RICCO (Gibberellin receptor GID1, putative OS=Ricinus communis GN=RCOM_1498230 PE=4 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 7.181e-124
Identity = 199/341 (58.36%), Postives = 249/341 (73.02%), Query Frame = -1
Query: 1048 MSDQTKATPSSNPTVVDDPYKRLEITRNPNG-SLTRNP---NRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTN---KFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTN--LMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASAT 2043
            MSDQT   P  N T +D PYK L I   PNG +LTR P   N FP +     P P VP+L+KD+TINQ+ +TWAR+FLP  K LD++   K PL+V++H GGFI  SAA+T  H +C+N A++L AIVVS++YRLAPEHRLPAAYDDA+EALLWIKT+ +EWLTQ+A+F+  F+MG S+GANI YHA + VAE  D L P KIRGLILHQPFFGGS +  SELRLVND +LP    DLMWEL+LPIG DRDHEYCNPT  +G++   + K+  +GWKVLV   D DPL+DRQVE +K ++EKGV+V SH   G +HGV+F+ P K  AL+   K FI+S +
Sbjct:    1 MSDQT---PPPNATTID-PYKHLRIIPGPNGNTLTRLPEISNFFPRS-----PHP-VPILTKDITINQSNNTWARLFLP-HKTLDSSNQSKLPLVVWFHGGGFILFSAATTFSHDYCANTAIELNAIVVSIEYRLAPEHRLPAAYDDAVEALLWIKTSPDEWLTQFADFSKSFLMGGSAGANIVYHAALTVAERVDDLEPIKIRGLILHQPFFGGSKRTGSELRLVNDRILPLCCSDLMWELSLPIGADRDHEYCNPTAEEGSSKAAVAKIRELGWKVLVDCGDKDPLMDRQVEFIKMLQEKGVQVASHIVEGGYHGVEFLDPSKCKALYAAYKCFISSIS 330          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A059DK70_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02855 PE=4 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 2.805e-123
Identity = 185/332 (55.72%), Postives = 243/332 (73.19%), Query Frame = -1
Query: 1045 TPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTV-PVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLME---KLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2022
            T SSN TV  +P    ++T NP+G+L R+   FP+TSA+PDP P+  PVLSKD+ IN + +TWAR+FLP    +     K PLIVYYH GGFI CS AS IFH  C  +A +L A+VVSV YRLAPEH+LP AYDDA+EAL WIKT ++EWL ++A+ +TC++MGSS+G N+A+HAG+R +   +GL P KIRGLILH PFFGG+ +  SELRL N+ +LP    DLMWEL+LP+GVDRDHEYCN      + L E   K+ ++GW++LVTGCDGDPLIDRQVELVK ++EKG++VVS F  G +H  + ++PDK+  L L LK F+++  +
Sbjct:    5 TASSNLTV--NPLAHFQVTLNPDGTLNRDRFVFPDTSASPDPIPSAGPVLSKDIPINPSHNTWARIFLPHHHARSCSEEKLPLIVYYHGGGFILCSPASNIFHELCITLARELSAVVVSVKYRLAPEHQLPLAYDDAVEALHWIKTARDEWLVEHADLSTCYLMGSSAGGNLAFHAGLRTSASPEGLEPLKIRGLILHHPFFGGTQRTPSELRLANNHILPLAAIDLMWELSLPLGVDRDHEYCNLAVDGSSKLSEGVDKMRSLGWRLLVTGCDGDPLIDRQVELVKLLKEKGLRVVSDFTEGGYHINEAIEPDKSQPLVLTLKSFMSTTVA 334          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A067FPE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019164mg PE=4 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 6.400e-123
Identity = 192/348 (55.17%), Postives = 244/348 (70.11%), Query Frame = -1
Query: 1027 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPD-PDP---TVPVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQP---DKANALFLVLKDFIASATSVTINAN 2043
            MSD  K  PS +     DP+ +L+I +N +G++TRN   FP+T ATP+ PD    T+ VLSKDV +NQ+ HTW R+F+P Q   P  T + PLIV++H GGF+  SAA+++FH FCSN+A K+ A+V SV+YRLAPEHRLPAAYDDA+E L WIK TQE+WL +Y + + CF+MG SSG NIAYHAG+R + + D L P KIRGLIL+ PFFGG  + ESELRLVNDP LP  V DLMWELALPIGVDRD+EYCNPT   G+ L++ +  +GW V+V+G   DPLIDRQ+E VK ME KGVKV+ H   G  HG D   P    K  A+   +KDF+ S+      A+
Sbjct:    1 MSDD-KTAPSDSTI---DPFNQLQIIQNDDGTITRNWTNFPSTVATPNIPDEHHHTLDVLSKDVPVNQSKHTWVRIFVPCQALDPSSTAQLPLIVHFHGGGFVVLSAATSLFHDFCSNIAAKVPAVVASVEYRLAPEHRLPAAYDDAMEVLHWIKKTQEDWLHKYVDLSRCFLMGDSSGGNIAYHAGLRASAQVDDLLPLKIRGLILNYPFFGGVKRTESELRLVNDPFLPLCVNDLMWELALPIGVDRDNEYCNPTVGGGSKLLDHIRMLGWNVMVSGSSEDPLIDRQIEFVKMMERKGVKVICHLDQGGKHGFDDSDPVSAAKRRAVLDCIKDFVLSSADNRFRAS 344          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A059DK69_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02853 PE=4 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 8.171e-123
Identity = 185/332 (55.72%), Postives = 244/332 (73.49%), Query Frame = -1
Query: 1045 TPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTV-PVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLME---KLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2022
            T SSN TV  +P   +++T NP+G+L R+   FP+TSA+PDP P+  PVLSKDV IN + +TWAR+FLPR   +     K PLIVYYH GGFI  S AS IFH  C  +A +L A+VVSV YRLAPEH+LP AYDDA+EAL WIKT ++EWL ++A+ +TC++MGSS+G N+A+HAG+R +   + L P KIRGLILH PFFGG+ +  SELRL N+ +LP    DLMWEL+LP+GVDRDHEYCN      + L E   K+ ++GW++LVTGCDGDPLIDRQVELVK ++EKG++VVS F  G +H ++ ++PDK+  L L LK F+++  +
Sbjct:    5 TASSNLTV--NPLAYVQVTLNPDGTLNRDRFVFPDTSASPDPIPSAGPVLSKDVPINPSHNTWARIFLPRHHARSCSEEKLPLIVYYHGGGFILGSPASNIFHELCITLARELSAVVVSVKYRLAPEHQLPMAYDDAVEALHWIKTARDEWLVEHADLSTCYLMGSSAGGNLAFHAGLRTSTSPEDLEPLKIRGLILHHPFFGGTQRTPSELRLANNHILPLAAIDLMWELSLPLGVDRDHEYCNSAVNGSSKLSEGVDKMRSLGWRLLVTGCDGDPLIDRQVELVKLLKEKGLRVVSDFMEGGYHIIEAIEPDKSKPLVLTLKSFMSTTVA 334          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A061F8Z1_THECC (Carboxyesterase 20, putative OS=Theobroma cacao GN=TCM_032452 PE=4 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 2.071e-122
Identity = 182/332 (54.82%), Postives = 234/332 (70.48%), Query Frame = -1
Query: 1051 TKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDP-DPTVPVLSKDVTINQTTHTWARVFLPRQ----KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASA 2031
            T+  PSS+   + DP+KRL+IT NP+G+LTR  N F  T A P+  D +  VL +D+ IN + +TWAR+FLP+Q          K PL+V++H GGFI  S    + H FCSNMA +L  IVVS  YRLAPEHRLPAAYDDA+EAL WIKT+ + WL  YA+F+  F+MG S+G NIAYH G+R AE+ D L P KI+GLILHQPFFGG  + ESE R +NDP+  P   DLMWEL+LPIG +RDHE+CNPT   G+  +EK+  +GW+V VTGCDGD LIDRQ+ELVK +++K ++VVS F  G  HG +   P KA AL++ LK+FI S+
Sbjct:    3 TQTIPSSS---ISDPFKRLQITLNPDGTLTR-LNIFGRTPAKPESSDNSTAVLCRDIPINYSNNTWARIFLPKQALDHSSTSAKKLPLLVHFHGGGFILFSPDENMSHEFCSNMASELSVIVVSASYRLAPEHRLPAAYDDAMEALSWIKTSHDNWLENYADFSQIFLMGGSAGGNIAYHLGLRAAEQVDSLSPLKIQGLILHQPFFGGVERTESEFRSINDPIFSPCDSDLMWELSLPIGANRDHEFCNPTVAHGSTALEKIKRLGWRVFVTGCDGDQLIDRQIELVKMIKKKEIRVVSRFVEGGFHGFELADPSKAKALYVALKNFIFSS 330          
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A0D2RNX6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G282000 PE=4 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 4.611e-121
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 1
Query:    1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV--SISSLQ 441
            VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLR LISKSKAGEKYGNYVLQFADDFSYTDPV  S++S Q
Sbjct:  413 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRELISKSKAGEKYGNYVLQFADDFSYTDPVDGSVASKQ 561          

HSP 2 Score: 167.933 bits (424), Expect = 4.611e-121
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 3
Query:  501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749
            VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT
Sbjct:  553 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 635          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PGM1_RAT2.135e-6955.84Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 ... [more]
PGM1_BOVIN4.895e-6957.79Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV... [more]
PGM1_RABIT2.659e-6856.16Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=P... [more]
PGM_RHIRD1.455e-6557.64Phosphoglucomutase OS=Rhizobium radiobacter GN=pgm... [more]
PGM1_DICDI2.731e-6555.13Phosphoglucomutase-1 OS=Dictyostelium discoideum G... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2UB73_GOSRA0.000e+098.53Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061G0D6_THECC2.189e-17275.38Carboxyesterase 20, putative OS=Theobroma cacao GN... [more]
B9ID20_POPTR9.484e-13758.38Putative esterase family protein OS=Populus tricho... [more]
M5X4Q4_PRUPE1.577e-12757.44Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9R9J9_RICCO7.181e-12458.36Gibberellin receptor GID1, putative OS=Ricinus com... [more]
A0A059DK70_EUCGR2.805e-12355.72Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A067FPE0_CITSI6.400e-12355.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A059DK69_EUCGR8.171e-12355.72Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
A0A061F8Z1_THECC2.071e-12254.82Carboxyesterase 20, putative OS=Theobroma cacao GN... [more]
A0A0D2RNX6_GOSRA4.611e-12195.97Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013094Alpha/beta hydrolase fold-3PFAMPF07859Abhydrolase_3coord: 88..308
e-value: 4.8E-47
score: 160.4
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 6..329
e-value: 7.7E-70
score: 235.1
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 46..322
NoneNo IPR availablePANTHERPTHR23024:SF173SUBFAMILY NOT NAMEDcoord: 18..341
NoneNo IPR availablePANTHERPTHR23024MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMEScoord: 18..341
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0093258 ID=g.barbadense_cottongen_reftransV1_0093258; Name=g.barbadense_cottongen_reftransV1_0093258; organism=Gossypium barbadense; type=contig; length=2307bp
GTTGCTGAAAAATTGGGTCTTACCTTTTTTGAGGTTCCTACTGGCTGGAA
ATTTTTTGGGAATCTTATGGATGCTGGAAAGTTGTCAATTTGTGGGGAAG
AAAGTTTTGGTACGGGTTCAGATCACATTCGTGAGAAGGATGGCATATGG
GCTGTTTTAGCATGGCTCTCGATTATTGCATATCGAAACAAAGACAAGAA
ACCAGGGGAGAAATTGGTATCTATCTCTGATGTTGTCAAAGAACACTGGG
CAACTTATGGAAGAAATTTCTTTTCTAGATATGATTACGAAGAATGTGAA
TCTGAAGGTGCCAATAAAATGATCGAATACCTTAGAGGACTAATCTCAAA
GAGTAAGGCAGGTGAAAAGTATGGAAATTATGTCCTTCAATTTGCTGATG
ACTTTTCATATACCGATCCCGTAAGTATTAGCTCTCTACAATTTTCGTAC
AATTGATATCCTTCAACAAATTGCTATATATTATCCGTCTGTTTTCTTAG
GTGGATGGAAGTGTGGCCTCAAAGCAGGGTGTTCGATTTGTTTTCACAGA
TGGTTCAAGGATTATATTCCGTTTATCTGGAACTGGCTCAGCTGGTGCAA
CGGTTCGAATCTACATTGAGCAATTTGAACCAGATGCTTCTAAACATGAC
ATGGACGCCCAAGTGGCATTAAAACCATTAATAGATTTGGCATTGTCTGT
ATCGAAGCTGAAGGACTTCACAGGCAGGGAGAAACCTACAGTCATCACAT
AAAAAAGCGACACTCATATTGAGCCCCTCCCCTATGAATTCCCACTTTTA
TTGAGTCATCTTTCAGTTTTGTTTTTAATGCTATAGTTAGCTTGGCATTA
TGTAAATTTATGTAAAATACTTGGAAGGAATAAATTAAAAGCATCTAGCT
AAAATATTCTGGTGAAATAAAAATATTTCAAGAGTTTACTTTTTTAGGAC
CACTAGTAAGATAATCCACTGCTCTGTACGTACATACCATTATTGCATGA
TAAAGATAGCTATAAATTCATTCAACATTTGCATTTATTGTAACTGACGT
TGCAGATGCAATAAAATCCTTCAAGACCAAAAACAGTGCGTTGGCCTTAT
CAGGCTGCATAAAATCCACTCCATGATGATCCCCCATACGAAAATGGCTC
ACTACCTTTACACCCTTTTCTTCCATTGATTTTACGAGCTCCACCTGACG
GTCGATTAAAGGGTCGCCGTCACAGCCGGTCACCAACACTTTCCATCCTA
CTGCAGCGAGCTTCTCCATAAGGTTTGTCCCCTTGGTTGTTGTTGGATTA
CAGTACTCGTGGTCACGGTCAACTCCGATTGGCAACGCCAGTTCCCACAT
CAGGTCCCCCACACCAGGAGGCAATACGGGATCATTAACCAATCTTAACT
CTGACTCAACCTTTACGGACCCGCCGAAGAATGGTTGGTGCAATATTAGC
CCTCGGATCTTCCAGGGTCGAAGACCGTCGGCTTCTTCCGCCACACGTAT
TCCTGCATGGTAGGCTATGTTAGCACCTGAACTCGACCCCATAACGAAAC
AAGTGGTGAAATTTGCGTATTGTGTCAACCACTCTTCTTGGGTGGTTTTG
ATCCAGAGCAACGCTTCAATAGCGTCGTCGTAAGCAGCAGGAAGCCTATG
CTCAGGAGCAAGACGATAGTCGACGGACACGACGATGGCTTGGAGTTTCA
ACGCCATGTTTGAGCAAAAAACATGGAAGATCGTGGATGCCGCACTGCAG
TGGATGAAGCCTCCTGCATGGTAATAAACTATGAGAGGGAACTTGTTCGT
ATCAAGCGGCTTCTGCCTGGGGAGGAACACACGAGCCCATGTGTGTGTCG
TTTGGTTGATAGTGACATCTTTGGAGAGAACCGGGACAGTTGGGTCCGGA
TCAGGTGTGGCTGAAGTGTTGGGAAACCTATTAGGGTTGCGCGTAAGCGA
GCCATTGGGGTTACGAGTGATTTCTAGGCGCTTGTAAGGATCATCAACGA
CAGTGGGATTGGAAGAAGGGGTTGCTTTTGTTTGATCCGACATCACCGGA
GCCCTCGGTTGAGGTCTTTTGTTCTGGTTTTTTCAACTTTGGGTTTCCTA
TGAAGATAAATATAGAGAGAGATTTCTTGGGTAAGCAGTAAGCAATTACT
GGATAGTTTTCATGATGGCTGCCGGGTTATCAGTAGACTTGGTTTTGTTT
GTCAAACAAGTTACCTATTTTAAAACTAGAAATTCATTGGGATGAATTGA
CGTTTAGGGAGAACGAATGGCTAATTTTGAAAGTTTCAATGAAGCTTCAT
TTATGCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR013094AB_hydrolase_3
IPR029058AB_hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process