g.barbadense_cottongen_reftransV1_0093258, g.barbadense_cottongen_reftransV1_0093258 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RAT (Phosphoglucomutase-1 OS=Rattus norvegicus GN=Pgm1 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 2.135e-69 Identity = 86/154 (55.84%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGL-ISKSKAGEKYGN----YVLQFADDFSYTDPV--SISSLQ 441 VA + +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R + + D++K+HW +GRNFF+RYDYEE E+EGANKM++ L L + +S G+++ Y ++ AD+F Y+DPV SIS Q Sbjct: 344 VANATKIASYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------RVEDILKDHWQKFGRNFFTRYDYEEVEAEGANKMMKDLEALMLDRSFVGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQ 488 HSP 2 Score: 113.235 bits (282), Expect = 2.135e-69 Identity = 53/83 (63.86%), Postives = 67/83 (80.72%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749 VDGS++ QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E DA+K + D QV L PLI +AL VS+L++ TGR PTVIT Sbjct: 480 VDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDAAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_BOVIN (Phosphoglucomutase-1 OS=Bos taurus GN=PGM1 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.895e-69 Identity = 89/154 (57.79%), Postives = 111/154 (72.08%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLIS-KSKAGEKYG----NYVLQFADDFSYTDPV--SISSLQ 441 VA + +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R + S+ D++K+HW YGRNFF+RYDYEE E+EGANKM++ L LIS +S G+++ Y ++ D+F Y+DPV SIS Q Sbjct: 344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVGDKVYTVEKIDNFEYSDPVDGSISRNQ 488 HSP 2 Score: 108.227 bits (269), Expect = 4.895e-69 Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749 VDGS++ QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K D QV L PLI +AL VS+L++ TGR PTVIT Sbjct: 480 VDGSISRNQGLRLLFADGSRIIFRLSGTGSAGATIRLYIDSYEKDLAKIYQDPQVMLAPLISIALKVSQLQEKTGRTAPTVIT 562
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_RABIT (Phosphoglucomutase-1 OS=Oryctolagus cuniculus GN=PGM1 PE=1 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 2.659e-68 Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN----YVLQFADDFSYTDPV 423 VA + +E PTGWKFFGNLMDA KLS+CGEESFGTGSDHIREKDG+WAVLAWLSI+A R + S+ D++K+HW +GRNFF+RYDYEE E+EGA KM++ L L+ +S G+++ Y ++ AD+F Y DPV Sbjct: 344 VANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQ---------SVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPV 480 HSP 2 Score: 111.309 bits (277), Expect = 2.659e-68 Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749 VDGSV+ QG+R +F DGSRIIFRLSGTGSAGAT+R+YI+ +E D +K + D QV L PLI +AL VS+L++ TGR PTVIT Sbjct: 480 VDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM_RHIRD (Phosphoglucomutase OS=Rhizobium radiobacter GN=pgm PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.455e-65 Identity = 83/144 (57.64%), Postives = 107/144 (74.31%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPVSIS 432 VAEKLGL +E PTGWKFFGNLMDAGK++ICGEESFGTGS+H+REKDG+WAVL WL+I+A R + S+ D+V +HWA YGRN++SR+DYEE +S+ AN ++ LR ++ + G YGN + ADDF+Y DPV S Sbjct: 330 VAEKLGLGMYETPTGWKFFGNLMDAGKVTICGEESFGTGSNHVREKDGLWAVLYWLNIVAARKE---------SVKDIVTKHWAEYGRNYYSRHDYEEVDSDAANTLVAILREKLA-TLPGTSYGNLKVAAADDFAYHDPVDQS 463 HSP 2 Score: 94.3597 bits (233), Expect = 1.455e-65 Identity = 43/83 (51.81%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749 VD SV+ QG+R +F GSRI+ RLSGTG+AGAT+R+Y+E++EPDA++H ++ Q AL LI +A +++ +K T +PTVIT Sbjct: 460 VDQSVSKNQGIRILFEGGSRIVLRLSGTGTAGATLRLYVERYEPDAARHGIETQSALADLISVADTIAGIKAHTADSEPTVIT 542
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Match: PGM1_DICDI (Phosphoglucomutase-1 OS=Dictyostelium discoideum GN=pgmA PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.731e-65 Identity = 86/156 (55.13%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLI-SKSKAGEKYGN------YVLQFADDFSYTDPV--SISSLQ 441 VA L + FFEVPTGWKFFGNLMDAG LSICGEESFGTGSDHIREKDGIWA++ WL I+ + N+ + VSI ++VK+HWA YGRN++SRYDYEE ++ A M++++ I SK G+K+ Y + DDF Y DP+ S+SS Q Sbjct: 343 VATDLKVPFFEVPTGWKFFGNLMDAGTLSICGEESFGTGSDHIREKDGIWAIICWLQILTHHNQSTN-DKNFVSIEEIVKQHWAKYGRNYYSRYDYEEIDTAPAEAMMKHVSQQIESKQLIGKKFTGISDSLEYEIASCDDFEYKDPIDSSVSSHQ 497 HSP 2 Score: 99.7525 bits (247), Expect = 2.731e-65 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLAL-SVSKLKDFTGREKPTVIT 749 +D SV+S QG+R +FTDGSRII+RLSGTGS GATVR+Y +++E ++ + D Q LK LI +AL +SKL +TGR +P VIT Sbjct: 489 IDSSVSSHQGLRIIFTDGSRIIYRLSGTGSTGATVRVYFDKYETQPTQLNNDVQTHLKSLIHIALVEISKLNHYTGRNEPNVIT 572
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A0D2UB73_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G282100 PE=4 SV=1) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 336/341 (98.53%), Postives = 337/341 (98.83%), Query Frame = -1 Query: 1021 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE 2043 MSDQTK PSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMAL+LQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIG DRDHEYCNPTTTKGTNL EKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE Sbjct: 1 MSDQTKTVPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALELQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGADRDHEYCNPTTTKGTNLTEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVTINANVE 341
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A061G0D6_THECC (Carboxyesterase 20, putative OS=Theobroma cacao GN=TCM_015038 PE=4 SV=1) HSP 1 Score: 523.857 bits (1348), Expect = 2.189e-172 Identity = 251/333 (75.38%), Postives = 283/333 (84.98%), Query Frame = -1 Query: 1045 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2043 MS QT A+PS NP +VDDPYKRLEI N +GSLTRNP+R+PNTSATPDP +PVLSKD+TINQ+ + WAR+FLPRQ ++K PLIVYYHAGGFIHCSAASTIFHVFCSNMAL+LQAI+VSVDYRLAPE+RLPAAYDDA+EAL W+KTT E+WL + A+ CF+MGSSSGANIAY AG+R AEEAD KIRGLILHQPFFGGS KVESELRLVNDP+L PGV DLMWELALPIG DRDH YCNP K + +++KL +VGW VLVTGCDGDPLIDRQV LVK MEEKG+KVVS FR GDHHGVDFMQP KA ALFLVLK+FI SA++ Sbjct: 1 MSSQT-ASPS-NPIIVDDPYKRLEIILNSDGSLTRNPDRYPNTSATPDPKQPIPVLSKDITINQSNNIWARIFLPRQALHTSSKLPLIVYYHAGGFIHCSAASTIFHVFCSNMALELQAIIVSVDYRLAPENRLPAAYDDAMEALHWVKTTPEDWLKRCADLANCFLMGSSSGANIAYRAGLRSAEEADDREALKIRGLILHQPFFGGSEKVESELRLVNDPILRPGVSDLMWELALPIGADRDHAYCNPAAGKTSKVLDKLVSVGWMVLVTGCDGDPLIDRQVGLVKLMEEKGMKVVSEFRAGDHHGVDFMQPAKARALFLVLKEFILSASA 331 HSP 2 Score: 397.897 bits (1021), Expect = 7.438e-124 Identity = 194/328 (59.15%), Postives = 242/328 (73.78%), Query Frame = -1 Query: 1039 VDDPYKRLEITRNPNGSLTRNPNRFPNTSATP-DPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTN-------KFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATSVT 1998 + DP++ L+I NP+G+LTRN P A P DP+ PVLSKDV IN + TWAR+FLPRQ LD K PL+VYYH GGF+ SA I H FCSNM+ + AIVVSVDYRLAPE+RLPAAYDD +EAL WIKTT +EWL +YA+ + CF+MGSS+G NIAYH G+R AE L P KI+GL+LHQPFFGG+ ++ SELRL+NDPVLPP V D+MW+L+LPIGVDRDHEYCNPT G+ +EK+ ++GWKVLV G DGDPLIDRQ+EL+K +E KGV+VV + R+G HG + M KA+A+ +V+KDFI S+ V Sbjct: 344 ITDPFEYLQIVLNPDGTLTRN-LMIPRVVAEPNDPEGQAPVLSKDVPINPSNRTWARIFLPRQA-LDCTSSSANKLKLPLVVYYHGGGFVLLSADMGICHDFCSNMSKAIPAIVVSVDYRLAPENRLPAAYDDGLEALHWIKTTGDEWLREYADLSNCFLMGSSAGGNIAYHVGLRAAEVVHELEPLKIKGLVLHQPFFGGTQRIASELRLMNDPVLPPIVSDVMWDLSLPIGVDRDHEYCNPTADGGSKELEKIKSLGWKVLVYGSDGDPLIDRQIELLKLVEGKGVQVVRNVRVGGFHGEEEMDVSKAHAMHMVVKDFIMSSKQVA 669
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: B9ID20_POPTR (Putative esterase family protein OS=Populus trichocarpa GN=POPTR_0015s13770g PE=4 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 9.484e-137 Identity = 195/334 (58.38%), Postives = 251/334 (75.15%), Query Frame = -1 Query: 1051 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLD---TNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASA 2043 MS QT SNPT+ D PY+ ++I N +G++TR+PNR+PN+S +PDP PVLSKD+ +NQ+ TW R+FLPRQ +D T+K PLIVY+H GGFI+CSA+ST+FH FCS+M L L ++VSVDYRLAPEHRLPAAYDDA+E L WIKTTQE+WL +Y +++ CF+MGSS+GAN AYHAG+ ++EAD L P KI+GLILH PF GG + SE++LVN+P LP + DLMW LALP+GVDRDHEYCNP G+ L + + +GWKV+VTGCDGDP+IDRQ+E V + K V+VV HF G +H V+ +P KA AL +LKDF+ A Sbjct: 1 MSGQTSP---SNPTITD-PYQHIQIIPNHDGTITRDPNRYPNSSPSPDPKDPTPVLSKDIIVNQSEKTWVRIFLPRQTIVDSSSTSKLPLIVYFHGGGFINCSASSTVFHDFCSSMVLDLHVVIVSVDYRLAPEHRLPAAYDDAMEVLQWIKTTQEDWLREYVDYSRCFLMGSSAGANAAYHAGLCASQEADNLVPLKIKGLILHHPFIGGVQRTGSEVKLVNEPHLPLCINDLMWNLALPLGVDRDHEYCNPMVDGGSKLWKNVRLLGWKVMVTGCDGDPMIDRQMEFVDMLVTKDVRVVGHFSTGGYHVVELKEPSKAKALHALLKDFMLDA 330
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: M5X4Q4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026008mg PE=4 SV=1) HSP 1 Score: 395.971 bits (1016), Expect = 1.577e-127 Identity = 193/336 (57.44%), Postives = 246/336 (73.21%), Query Frame = -1 Query: 1060 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPR----QKP----LDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFI 2043 M+DQT A+ SNPTV DPY L+I NP+ ++TR +PN+ T D + PVLSKD+ INQ+ +TW R+FLPR Q P T K PL+++YH GGFI SA STIFH FC N+A+ + ++ SVDYRLAPEHRLPAAYDDA+EAL WIKT Q++WLT YA+ + CF+MGSS+G NIAYHAG+R D L+P KIRGLIL QPFFGG+ + SEL + NDPVLP DLMW+L+LP G DRDHEYCNPT G+ ++++ A+GW+VLVTGCDGDPL+DRQ+ELVK +EEKGV+VV F G +HGV+ ++ KA+ LF+V + FI Sbjct: 1 MADQTAAS-HSNPTV--DPYHHLQIAPNPDDTITRLA-EYPNSPPTCDSNLPTPVLSKDIPINQSNNTWVRLFLPRHVLDQSPSPTATPTTKLPLVIFYHGGGFIILSAGSTIFHDFCVNLAIDVPVVIASVDYRLAPEHRLPAAYDDAMEALHWIKTAQDDWLTDYADLSNCFLMGSSAGGNIAYHAGLRAVVGVDHLKPLKIRGLILQQPFFGGTQRSGSELSMANDPVLPLSCCDLMWDLSLPRGFDRDHEYCNPTVGGGSKHLDEIKALGWRVLVTGCDGDPLMDRQIELVKMLEEKGVQVVGRFIQGGYHGVEDVELSKAHELFVVFRSFI 332
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: B9R9J9_RICCO (Gibberellin receptor GID1, putative OS=Ricinus communis GN=RCOM_1498230 PE=4 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 7.181e-124 Identity = 199/341 (58.36%), Postives = 249/341 (73.02%), Query Frame = -1 Query: 1048 MSDQTKATPSSNPTVVDDPYKRLEITRNPNG-SLTRNP---NRFPNTSATPDPDPTVPVLSKDVTINQTTHTWARVFLPRQKPLDTN---KFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTN--LMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASAT 2043 MSDQT P N T +D PYK L I PNG +LTR P N FP + P P VP+L+KD+TINQ+ +TWAR+FLP K LD++ K PL+V++H GGFI SAA+T H +C+N A++L AIVVS++YRLAPEHRLPAAYDDA+EALLWIKT+ +EWLTQ+A+F+ F+MG S+GANI YHA + VAE D L P KIRGLILHQPFFGGS + SELRLVND +LP DLMWEL+LPIG DRDHEYCNPT +G++ + K+ +GWKVLV D DPL+DRQVE +K ++EKGV+V SH G +HGV+F+ P K AL+ K FI+S + Sbjct: 1 MSDQT---PPPNATTID-PYKHLRIIPGPNGNTLTRLPEISNFFPRS-----PHP-VPILTKDITINQSNNTWARLFLP-HKTLDSSNQSKLPLVVWFHGGGFILFSAATTFSHDYCANTAIELNAIVVSIEYRLAPEHRLPAAYDDAVEALLWIKTSPDEWLTQFADFSKSFLMGGSAGANIVYHAALTVAERVDDLEPIKIRGLILHQPFFGGSKRTGSELRLVNDRILPLCCSDLMWELSLPIGADRDHEYCNPTAEEGSSKAAVAKIRELGWKVLVDCGDKDPLMDRQVEFIKMLQEKGVQVASHIVEGGYHGVEFLDPSKCKALYAAYKCFISSIS 330
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A059DK70_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02855 PE=4 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 2.805e-123 Identity = 185/332 (55.72%), Postives = 243/332 (73.19%), Query Frame = -1 Query: 1045 TPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTV-PVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLME---KLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2022 T SSN TV +P ++T NP+G+L R+ FP+TSA+PDP P+ PVLSKD+ IN + +TWAR+FLP + K PLIVYYH GGFI CS AS IFH C +A +L A+VVSV YRLAPEH+LP AYDDA+EAL WIKT ++EWL ++A+ +TC++MGSS+G N+A+HAG+R + +GL P KIRGLILH PFFGG+ + SELRL N+ +LP DLMWEL+LP+GVDRDHEYCN + L E K+ ++GW++LVTGCDGDPLIDRQVELVK ++EKG++VVS F G +H + ++PDK+ L L LK F+++ + Sbjct: 5 TASSNLTV--NPLAHFQVTLNPDGTLNRDRFVFPDTSASPDPIPSAGPVLSKDIPINPSHNTWARIFLPHHHARSCSEEKLPLIVYYHGGGFILCSPASNIFHELCITLARELSAVVVSVKYRLAPEHQLPLAYDDAVEALHWIKTARDEWLVEHADLSTCYLMGSSAGGNLAFHAGLRTSASPEGLEPLKIRGLILHHPFFGGTQRTPSELRLANNHILPLAAIDLMWELSLPLGVDRDHEYCNLAVDGSSKLSEGVDKMRSLGWRLLVTGCDGDPLIDRQVELVKLLKEKGLRVVSDFTEGGYHINEAIEPDKSQPLVLTLKSFMSTTVA 334
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A067FPE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019164mg PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 6.400e-123 Identity = 192/348 (55.17%), Postives = 244/348 (70.11%), Query Frame = -1 Query: 1027 MSDQTKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPD-PDP---TVPVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQP---DKANALFLVLKDFIASATSVTINAN 2043 MSD K PS + DP+ +L+I +N +G++TRN FP+T ATP+ PD T+ VLSKDV +NQ+ HTW R+F+P Q P T + PLIV++H GGF+ SAA+++FH FCSN+A K+ A+V SV+YRLAPEHRLPAAYDDA+E L WIK TQE+WL +Y + + CF+MG SSG NIAYHAG+R + + D L P KIRGLIL+ PFFGG + ESELRLVNDP LP V DLMWELALPIGVDRD+EYCNPT G+ L++ + +GW V+V+G DPLIDRQ+E VK ME KGVKV+ H G HG D P K A+ +KDF+ S+ A+ Sbjct: 1 MSDD-KTAPSDSTI---DPFNQLQIIQNDDGTITRNWTNFPSTVATPNIPDEHHHTLDVLSKDVPVNQSKHTWVRIFVPCQALDPSSTAQLPLIVHFHGGGFVVLSAATSLFHDFCSNIAAKVPAVVASVEYRLAPEHRLPAAYDDAMEVLHWIKKTQEDWLHKYVDLSRCFLMGDSSGGNIAYHAGLRASAQVDDLLPLKIRGLILNYPFFGGVKRTESELRLVNDPFLPLCVNDLMWELALPIGVDRDNEYCNPTVGGGSKLLDHIRMLGWNVMVSGSSEDPLIDRQIEFVKMMERKGVKVICHLDQGGKHGFDDSDPVSAAKRRAVLDCIKDFVLSSADNRFRAS 344
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A059DK69_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02853 PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 8.171e-123 Identity = 185/332 (55.72%), Postives = 244/332 (73.49%), Query Frame = -1 Query: 1045 TPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDPDPTV-PVLSKDVTINQTTHTWARVFLPRQ--KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLME---KLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASATS 2022 T SSN TV +P +++T NP+G+L R+ FP+TSA+PDP P+ PVLSKDV IN + +TWAR+FLPR + K PLIVYYH GGFI S AS IFH C +A +L A+VVSV YRLAPEH+LP AYDDA+EAL WIKT ++EWL ++A+ +TC++MGSS+G N+A+HAG+R + + L P KIRGLILH PFFGG+ + SELRL N+ +LP DLMWEL+LP+GVDRDHEYCN + L E K+ ++GW++LVTGCDGDPLIDRQVELVK ++EKG++VVS F G +H ++ ++PDK+ L L LK F+++ + Sbjct: 5 TASSNLTV--NPLAYVQVTLNPDGTLNRDRFVFPDTSASPDPIPSAGPVLSKDVPINPSHNTWARIFLPRHHARSCSEEKLPLIVYYHGGGFILGSPASNIFHELCITLARELSAVVVSVKYRLAPEHQLPMAYDDAVEALHWIKTARDEWLVEHADLSTCYLMGSSAGGNLAFHAGLRTSTSPEDLEPLKIRGLILHHPFFGGTQRTPSELRLANNHILPLAAIDLMWELSLPLGVDRDHEYCNSAVNGSSKLSEGVDKMRSLGWRLLVTGCDGDPLIDRQVELVKLLKEKGLRVVSDFMEGGYHIIEAIEPDKSKPLVLTLKSFMSTTVA 334
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A061F8Z1_THECC (Carboxyesterase 20, putative OS=Theobroma cacao GN=TCM_032452 PE=4 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 2.071e-122 Identity = 182/332 (54.82%), Postives = 234/332 (70.48%), Query Frame = -1 Query: 1051 TKATPSSNPTVVDDPYKRLEITRNPNGSLTRNPNRFPNTSATPDP-DPTVPVLSKDVTINQTTHTWARVFLPRQ----KPLDTNKFPLIVYYHAGGFIHCSAASTIFHVFCSNMALKLQAIVVSVDYRLAPEHRLPAAYDDAIEALLWIKTTQEEWLTQYANFTTCFVMGSSSGANIAYHAGIRVAEEADGLRPWKIRGLILHQPFFGGSVKVESELRLVNDPVLPPGVGDLMWELALPIGVDRDHEYCNPTTTKGTNLMEKLAAVGWKVLVTGCDGDPLIDRQVELVKSMEEKGVKVVSHFRMGDHHGVDFMQPDKANALFLVLKDFIASA 2031 T+ PSS+ + DP+KRL+IT NP+G+LTR N F T A P+ D + VL +D+ IN + +TWAR+FLP+Q K PL+V++H GGFI S + H FCSNMA +L IVVS YRLAPEHRLPAAYDDA+EAL WIKT+ + WL YA+F+ F+MG S+G NIAYH G+R AE+ D L P KI+GLILHQPFFGG + ESE R +NDP+ P DLMWEL+LPIG +RDHE+CNPT G+ +EK+ +GW+V VTGCDGD LIDRQ+ELVK +++K ++VVS F G HG + P KA AL++ LK+FI S+ Sbjct: 3 TQTIPSSS---ISDPFKRLQITLNPDGTLTR-LNIFGRTPAKPESSDNSTAVLCRDIPINYSNNTWARIFLPKQALDHSSTSAKKLPLLVHFHGGGFILFSPDENMSHEFCSNMASELSVIVVSASYRLAPEHRLPAAYDDAMEALSWIKTSHDNWLENYADFSQIFLMGGSAGGNIAYHLGLRAAEQVDSLSPLKIQGLILHQPFFGGVERTESEFRSINDPIFSPCDSDLMWELSLPIGANRDHEFCNPTVAHGSTALEKIKRLGWRVFVTGCDGDQLIDRQIELVKMIKKKEIRVVSRFVEGGFHGFELADPSKAKALYVALKNFIFSS 330
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Match: A0A0D2RNX6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G282000 PE=4 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.611e-121 Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 1 Query: 1 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRGLISKSKAGEKYGNYVLQFADDFSYTDPV--SISSLQ 441 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLR LISKSKAGEKYGNYVLQFADDFSYTDPV S++S Q Sbjct: 413 VAEKLGLTFFEVPTGWKFFGNLMDAGKLSICGEESFGTGSDHIREKDGIWAVLAWLSIIAYRNKDKKPGEKLVSISDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRELISKSKAGEKYGNYVLQFADDFSYTDPVDGSVASKQ 561 HSP 2 Score: 167.933 bits (424), Expect = 4.611e-121 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 3 Query: 501 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 749 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT Sbjct: 553 VDGSVASKQGVRFVFTDGSRIIFRLSGTGSAGATVRIYIEQFEPDASKHDMDAQVALKPLIDLALSVSKLKDFTGREKPTVIT 635 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0093258 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0093258 ID=g.barbadense_cottongen_reftransV1_0093258; Name=g.barbadense_cottongen_reftransV1_0093258; organism=Gossypium barbadense; type=contig; length=2307bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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