g.barbadense_cottongen_reftransV1_0092931, g.barbadense_cottongen_reftransV1_0092931 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092931
Unique Nameg.barbadense_cottongen_reftransV1_0092931
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2262
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Dt08chromosomeg.barbadense_cottongen_reftransV1_0092931:1..2262 .
Dt08:37952556..37955215 +
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.284e-20
Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = -1
Query: 1369 TVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPES----------EIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGW 1803
            TV+ITGA SG+G  TA  L + GAR+++  R+   AEEA  ++  E  ++          +++V  LDL+SL SVR F  EL      +++LINNAG F   +  +EDG EM F  N+LGHFLLT LLL  +  +A     P RIV VSS ++ +
Sbjct:   46 TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYKY 195          

HSP 2 Score: 56.6102 bits (135), Expect = 3.302e-7
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = -2
Query: 1020 FVWLSVPSQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTR 1190
            F  L+    Y+ +  Y+ SKLAN+L T+ELA+RL+    NVTVN +HPGIVRT L R
Sbjct:  200 FEDLNSEQSYNKSFCYSRSKLANILFTRELARRLE--GTNVTVNVLHPGIVRTNLGR 254          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.421e-20
Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = -1
Query: 1354 TVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEF-------PE------SEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDM 1803
            TV+ITGA SG+G  TA  L + GAR+++  R+   AEEA  ++  E        PE       E+IV  LDL+SL SVR F  E+      +++LINNAG F   +  +EDG EM F  N+LGHF     LL  ++    ++  P RIV VSS ++ +  GD+
Sbjct:   45 TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHF-----LLTNLLLGLLKSSAPSRIVVVSSKLYKY--GDI 200          

HSP 2 Score: 56.225 bits (134), Expect = 4.538e-7
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = -2
Query: 1020 LSVPSQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTR 1181
            L+    Y+ +  Y+ SKLAN+L T+ELA+RL+    NVTVN +HPGIVRT L R
Sbjct:  205 LNSEQSYNKSFCYSRSKLANILFTRELARRLE--GTNVTVNVLHPGIVRTNLGR 256          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.946e-20
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = -1
Query: 1375 KSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIH 1854
            K  A  V  T   L    V+ITGA +GIG ETAR LA+RGAR+ +  R++   E A + I ++   S+++V  LDLS   S+R F     +    ++ILINNAG     ++ + DG E   A N+LGHFLLT LLL  + ++A     P R+VN+SS  H
Sbjct:   24 KFFAGGVCRTDVQLFGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRLKESA-----PARVVNLSSVAH 178          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: WWOX_DROME (WW domain-containing oxidoreductase OS=Drosophila melanogaster GN=Wwox PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.267e-19
Identity = 60/134 (44.78%), Postives = 75/134 (55.97%), Query Frame = -1
Query: 1468 FGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFP--ESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHF 1863
            F S STA +V     DL   T +ITGA  GIG ETAR LA  G  ++   RN  +AE A  RI  E P   S     ALDLSSL SV+ FV E++     ++ LI NAG FA  +  + DG+E TF  ++L HF
Sbjct:  104 FDSCSTALQVLHG-KDLHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQERPAARSRCRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHF 236          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 2.534e-19
Identity = 66/160 (41.25%), Postives = 88/160 (55.00%), Query Frame = -1
Query: 1375 KSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIH 1854
            K  A  V  T   L    V+ITGA +GIG ETAR LA RGAR+ +  R++   E A + I  +   S+++V  LDLS   S+R F     +    ++ILINNAG     ++ + DG E     N+LGHFLLT LLL  +  +A     P R+VNVSS  H
Sbjct:   24 KFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSA-----PARVVNVSSVAH 178          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: DHRSX_HUMAN (Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 6.971e-19
Identity = 55/144 (38.19%), Postives = 84/144 (58.33%), Query Frame = -1
Query: 1375 IITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPG---RIVNVSSSIH 1797
            I+TG T GIG  TA+ LA+ G  +++   N   A++  ++I  E    ++  +  DL+S+TS+R FV + +   +P+++LINNAG        + DG E  F  NYLGHF    LL N ++ T K++G PG   R+V VSS+ H
Sbjct:   47 IVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHF----LLTNLLLDTLKESGSPGHSARVVTVSSATH 186          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.966e-19
Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = -1
Query: 1375 VIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIH 1800
            V++TGA +GIG ETA+ LA+RGAR+ L  R+++  E     I +     +++V  LDLS   S+R F     +    +++LINNAG     ++ + DG EM    N+LGHFLLT LLL  + ++A     P RIVNVSS  H
Sbjct:   44 VVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNVSSLAH 180          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.583e-18
Identity = 59/141 (41.84%), Postives = 84/141 (59.57%), Query Frame = -1
Query: 1375 IITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIH 1797
            I+TGA +GIG ETA+ LA+RGAR+ L  R++   E A   I +    S++ V  LDL+   S+R F  +  +    +++LINNAG     ++ + DG EM    N+LGHFLLT LLL  + ++A     P RIVN+SS  H
Sbjct:   42 IVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNLSSLGH 177          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: POR_PEA (Protochlorophyllide reductase, chloroplastic OS=Pisum sativum GN=3PCR PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.363e-16
Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = -1
Query: 1468 LRSITVIITGATSGIGAETARVLAKRGA-RLVLPARN-LKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKF---AHEHAISEDGIEMTFATNYLGHF 1815
            LR   V+ITGA+SG+G  TA+ LA+ G   +++  R+ LKAA  AK+   +   +    +M LDL+SL SVR FV       +P+++LINNA  +   A E + + DG E++  TN+LGHF
Sbjct:   84 LRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKS---AGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHF 201          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Match: PORB_HORVU (Protochlorophyllide reductase B, chloroplastic OS=Hordeum vulgare GN=PORB PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.167e-16
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = -1
Query: 1468 LRSITVIITGATSGIGAETARVLAKRGA-RLVLPARN-LKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKF---AHEHAISEDGIEMTFATNYLGHF 1815
            +R+   IITGA+SG+G  TA+ LA+ G   +++  R+ LK A  A+A   +  P+    ++ LDL+SL SVR FV  +  L++P+++++ NA  +   A E + + DG EM+   N+LGHF
Sbjct:   80 VRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKTARAARA---AGMPKGSYTIVHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAAVYQPTAKEPSFTADGFEMSVGVNHLGHF 197          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: M5W9U9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008299mg PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 6.945e-99
Identity = 166/196 (84.69%), Postives = 182/196 (92.86%), Query Frame = -1
Query: 1324 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRS 1911
            MLET+KYL+GS G SG+GS+STAE+VTE+ PDLR IT IITGATSGIGAETARVLAKRGARLVLPAR+LKAAE+AKARIVSEFP+SEII+MALDLSSLTSVRNFVSE ESL LP+N+LINNAGKFAHEHAISEDGIEMTFATNYLGHFLLTKLLLN M+  A  TGV GRIVNVSS+IHGWFSGD IRY+G+ISRS
Sbjct:    1 MLETVKYLLGSAGASGYGSRSTAEQVTESSPDLRHITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDAKARIVSEFPDSEIIIMALDLSSLTSVRNFVSEFESLQLPLNLLINNAGKFAHEHAISEDGIEMTFATNYLGHFLLTKLLLNKMIGPAAATGVQGRIVNVSSAIHGWFSGDTIRYLGEISRS 196          

HSP 2 Score: 108.997 bits (271), Expect = 3.923e-24
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = -2
Query:  993 SQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1169
            S YD TRAYALSKLANVLHTKELA+RLK++DANVTVNCVHPGIVRTRLTREREGL T +
Sbjct:  198 SDYDETRAYALSKLANVLHTKELARRLKEMDANVTVNCVHPGIVRTRLTREREGLATDL 256          

HSP 3 Score: 32.3426 bits (72), Expect = 3.923e-24
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DL F +ASKLLKTIPQ
Sbjct:  255 DLAFLMASKLLKTIPQ 270          

HSP 4 Score: 91.2781 bits (225), Expect = 1.311e-16
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = -3
Query:  560 HPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPLSAFDY 730
            HPRL+++SGKYFADCNE   SKLGSN +EAA+LW+ASEIMVSK + A+FDP S  +Y
Sbjct:  281 HPRLVDVSGKYFADCNETLPSKLGSNLSEAARLWSASEIMVSKSSTAIFDPSSQLEY 337          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: D7TVM6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02190 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 4.569e-97
Identity = 163/197 (82.74%), Postives = 182/197 (92.39%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            ML+ LKYL+GS G SG+GSKSTAEEVTE CPDL S+T +ITGATSGIGAETARVLAKRGARLVLPAR+LKAAEEAKARIV+EFP SEI+VMALDLSSL SVR FVSE ESL+LP+N+LINNAGKF HEHAISEDGIEMTFATNYLGHFLLTKLLLN M++TAK+TGV GRIVNVSS+IH WFSGD+IRY+G I+R+K
Sbjct:    1 MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSSLDSVRCFVSEFESLDLPLNLLINNAGKFTHEHAISEDGIEMTFATNYLGHFLLTKLLLNKMIETAKKTGVQGRIVNVSSTIHSWFSGDVIRYLGLITRNK 197          

HSP 2 Score: 121.324 bits (303), Expect = 1.958e-26
Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = -3
Query:  563 F*WTMDFHLSRVQAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPLSAFD 799
            F  T  F  +  QAAATTCYVATHPRL+N+SGKYFADCNEAWTSKLGSNS EA++LW+ASEIM ++ ++A+FDPL A D
Sbjct:  258 FFLTSKFLKTIPQAAATTCYVATHPRLVNVSGKYFADCNEAWTSKLGSNSQEASRLWSASEIMTARDSRAIFDPLDASD 336          

HSP 3 Score: 112.849 bits (281), Expect = 1.054e-25
Identity = 52/59 (88.14%), Postives = 57/59 (96.61%), Query Frame = -2
Query:  993 SQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1169
            SQYDATRAYA+SKLANVLHTKELAQRLKQ+DANVTVNCVHPGIVRTRLTRE EG++T +
Sbjct:  198 SQYDATRAYAVSKLANVLHTKELAQRLKQMDANVTVNCVHPGIVRTRLTRETEGIVTDL 256          

HSP 4 Score: 33.4982 bits (75), Expect = 1.054e-25
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DL+FFL SK LKTIPQ
Sbjct:  255 DLIFFLTSKFLKTIPQ 270          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: W9SF90_9ROSA (Short-chain dehydrogenase TIC 32 OS=Morus notabilis GN=L484_000143 PE=4 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.936e-94
Identity = 156/198 (78.79%), Postives = 180/198 (90.91%), Query Frame = -1
Query: 1318 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSKR 1911
            MLE++KYLIGS G SG+ SKSTA+EVTE   DLRS+T IITGATSGIGAETARVLA+RGARLVLPAR+LKAAE+AKARI SE+P+SEI+VMALDLSSL SVR FV E E+L+LP+N+LINNAGKFAH+HAISEDGIEMTFATNYLGHFLLTKLLL  M++TAK TG+ GRIVNVSS++HGWFSGDM+RY+G I R+KR
Sbjct:    1 MLESVKYLIGSVGASGYSSKSTADEVTE-MSDLRSVTAIITGATSGIGAETARVLARRGARLVLPARSLKAAEDAKARIASEYPDSEIVVMALDLSSLASVRRFVVEFEALDLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSTVHGWFSGDMLRYLGVIGRTKR 197          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: A0A022R0R1_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0096692mg PE=4 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 3.465e-94
Identity = 156/197 (79.19%), Postives = 178/197 (90.36%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            MLET+KYLIGS G SGF SKSTAE+VT+ CPDLRSIT IITGATSGIGAETARVLAKRGARLVLPAR+LKAAE+ KARI+SE PES+IIVM LDLSSL SVR FVSE ESL+LP+N+LINNAGKF+++H ISEDG+EMTFATNYLGHFLLTKLL+  M++TAK +GV GRIVNVSSSIH WFSGDMIRY+  I+++K
Sbjct:    1 MLETVKYLIGSAGASGFSSKSTAEQVTDACPDLRSITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDTKARILSEIPESQIIVMWLDLSSLDSVRRFVSEFESLDLPLNLLINNAGKFSYDHGISEDGVEMTFATNYLGHFLLTKLLMKKMIETAKSSGVEGRIVNVSSSIHSWFSGDMIRYLRLITKNK 197          

HSP 2 Score: 103.219 bits (256), Expect = 7.734e-21
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = -2
Query:  999 SQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLIT 1169
            S YD TRAYALSKLANVLHTKEL +RL++++ANVT NCVHPGIVRTRLTR+REGLIT
Sbjct:  198 SDYDGTRAYALSKLANVLHTKELDRRLREMEANVTANCVHPGIVRTRLTRDREGLIT 254          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: B9GL13_POPTR (Short-chain dehydrogenase/reductase family protein OS=Populus trichocarpa GN=POPTR_0001s11070g PE=3 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 1.990e-93
Identity = 159/197 (80.71%), Postives = 177/197 (89.85%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            M E+LKYL GS G SG+GSKST E+VTE C DL SIT IITGATSGIGAETARVLAKRGARLVLPAR+LKAAE+AKARI+SE P++EIIVM LDLSSL SVRNFVSE ES +LP+N+LINNAGKFAHEHAISEDGIEMTFATN+LGHFLLTKLLL  M++TAK TG+ GRIVNVSSSI+ WFSGD IRY+GQISR+K
Sbjct:    1 MFESLKYLTGSAGASGYGSKSTGEQVTENCGDLHSITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDAKARIISENPDTEIIVMGLDLSSLNSVRNFVSEFESFDLPLNLLINNAGKFAHEHAISEDGIEMTFATNFLGHFLLTKLLLKKMIETAKTTGIQGRIVNVSSSIYNWFSGDPIRYLGQISRNK 197          

HSP 2 Score: 119.398 bits (298), Expect = 3.254e-53
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = -3
Query:  560 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPL-SAFDY 763
            QAAATTCYVATHPRL+N++GKYF+DCNEA TSKLGSNS EAA+LW ASEIMVS+ +KAVFDPL S  DY
Sbjct:  271 QAAATTCYVATHPRLVNVTGKYFSDCNEASTSKLGSNSTEAARLWTASEIMVSRGSKAVFDPLTSTLDY 339          

HSP 3 Score: 107.071 bits (266), Expect = 3.254e-53
Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = -2
Query:  999 QYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLIT 1166
             +D TRAYALSKLANVLHTKELAQRLKQ++ANVTVNCVHPG+VRTRLTREREG++T
Sbjct:  200 DFDPTRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGVVRTRLTREREGIVT 255          

HSP 4 Score: 32.7278 bits (73), Expect = 3.254e-53
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            D+ FFL SKLLKTIPQ
Sbjct:  256 DMAFFLTSKLLKTIPQ 271          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: A0A022R3X5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a0096692mg PE=4 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 2.165e-93
Identity = 156/197 (79.19%), Postives = 178/197 (90.36%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            MLET+KYLIGS G SGF SKSTAE+VT+ CPDLRSIT IITGATSGIGAETARVLAKRGARLVLPAR+LKAAE+ KARI+SE PES+IIVM LDLSSL SVR FVSE ESL+LP+N+LINNAGKF+++H ISEDG+EMTFATNYLGHFLLTKLL+  M++TAK +GV GRIVNVSSSIH WFSGDMIRY+  I+++K
Sbjct:    1 MLETVKYLIGSAGASGFSSKSTAEQVTDACPDLRSITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDTKARILSEIPESQIIVMWLDLSSLDSVRRFVSEFESLDLPLNLLINNAGKFSYDHGISEDGVEMTFATNYLGHFLLTKLLMKKMIETAKSSGVEGRIVNVSSSIHSWFSGDMIRYLRLITKNK 197          

HSP 2 Score: 103.605 bits (257), Expect = 2.472e-42
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = -2
Query:  993 SQYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1169
            S YD TRAYALSKLANVLHTKEL +RL++++ANVT NCVHPGIVRTRLTR+REGLIT +
Sbjct:  198 SDYDGTRAYALSKLANVLHTKELDRRLREMEANVTANCVHPGIVRTRLTRDREGLITDL 256          

HSP 3 Score: 82.4185 bits (202), Expect = 2.472e-42
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = -3
Query:  581 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFD 763
            QAAATTCYVAT+PR+ N SGKY++DCNE+  SKLGS+  EAA+LWA SE MVS  +  + D
Sbjct:  270 QAAATTCYVATNPRVENASGKYYSDCNESSPSKLGSSLAEAARLWAVSEKMVSTDSNILVD 330          

HSP 4 Score: 37.3502 bits (85), Expect = 2.472e-42
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DLVFFLASKLLKTIPQ
Sbjct:  255 DLVFFLASKLLKTIPQ 270          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: A0A068UUZ7_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_62 OS=Coffea canephora GN=GSCOC_T00035613001 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.180e-92
Identity = 156/197 (79.19%), Postives = 176/197 (89.34%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            MLET+KYL+GS G SGFGSKSTAE+VT+ CPDLRSIT IITGATSGIGAETARVLAKRGARLVLPAR+LKAAE++KARI+SEFPES+IIVM LDLSS  SVR FV++  SLNLP+++LINNAGKF  EHAISEDGIEMTFATNYLGHFLLTKLL+  M++TAK TGV GRIVNVSSSIH WFSGD I Y+  I+RS+
Sbjct:    1 MLETVKYLLGSAGPSGFGSKSTAEQVTDYCPDLRSITAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEDSKARILSEFPESDIIVMPLDLSSFFSVRKFVADFRSLNLPLHLLINNAGKFTQEHAISEDGIEMTFATNYLGHFLLTKLLVTKMVETAKSTGVQGRIVNVSSSIHSWFSGDPISYLSSITRSR 197          

HSP 2 Score: 105.916 bits (263), Expect = 1.669e-47
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = -2
Query:  993 SQYDATRAYALSKLANVLHTKELAQRLKQ-VDANVTVNCVHPGIVRTRLTREREGLITGI 1169
            S YDATRAYALSKLANVLHTKELAQRL++ ++ANVTVNCVHPGIVRTRLTRER+GLIT +
Sbjct:  198 SHYDATRAYALSKLANVLHTKELAQRLQEEMEANVTVNCVHPGIVRTRLTRERDGLITDL 257          

HSP 3 Score: 97.4413 bits (241), Expect = 1.669e-47
Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = -3
Query:  602 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSK 763
            QAAATTCYVATHPRLLN++GKYFADCNEA  SKL SNS+EAA++W+ASE M+SK
Sbjct:  271 QAAATTCYVATHPRLLNVTGKYFADCNEAPASKLASNSSEAARIWSASETMISK 324          

HSP 4 Score: 36.965 bits (84), Expect = 1.669e-47
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DLVFFLASKLLKTIPQ
Sbjct:  256 DLVFFLASKLLKTIPQ 271          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: I1KPN7_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 4.946e-92
Identity = 155/198 (78.28%), Postives = 176/198 (88.89%), Query Frame = -1
Query: 1318 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSKR 1911
            MLET+KYL+GS G SGFGSK+TAE+VTE   DLRSIT IITGATSGIG ETARVLAKRGARLVLPAR++KAAE+AKARIVSE P+SEIIVMALDLSSL SV NFV+   SL LP+++LINNAGKFAHEHAISEDG+EMTFATNYLGHF++T LL+  M++TAK+TGV GRIVNVSSSIHGWFSGD I Y+  ISR+KR
Sbjct:    1 MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATSGIGTETARVLAKRGARLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSSLNSVTNFVAHFHSLGLPLHLLINNAGKFAHEHAISEDGVEMTFATNYLGHFVMTNLLVKKMVETAKETGVQGRIVNVSSSIHGWFSGDAISYLALISRNKR 198          

HSP 2 Score: 112.079 bits (279), Expect = 5.714e-52
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = -3
Query:  560 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPLSAFDY 763
            QAAATTCYVATHPRLLN+SGKYFADCNE  TSKLGSNS EAA+LWAASE M+S+  KA FD L+  ++
Sbjct:  270 QAAATTCYVATHPRLLNVSGKYFADCNETSTSKLGSNSTEAARLWAASEFMISRGPKAAFDLLNHLEF 337          

HSP 3 Score: 105.916 bits (263), Expect = 5.714e-52
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = -2
Query:  993 QYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1166
             YDATRAYALSKLANV HTKELA+RL+Q+ ANVTVNCVHPGIVRTRLTREREGL+T +
Sbjct:  199 HYDATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGIVRTRLTREREGLLTDL 256          

HSP 4 Score: 37.3502 bits (85), Expect = 5.714e-52
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DLVFFLASKLLKTIPQ
Sbjct:  255 DLVFFLASKLLKTIPQ 270          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: D7M8Y3_ARALL (Short-chain dehydrogenase/reductase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492457 PE=4 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.055e-91
Identity = 155/197 (78.68%), Postives = 177/197 (89.85%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            M+ET KYL+G+ G SGFGSKSTAEEVTE C DLRS+TVIITGATSGIGAETARVLAKRGARL+ PARN+KAAEEAK RIVSEFPE+EI+VM LDLSS+ SVRNFV++ ESL+LP+N+LINNAGK AHEHAISEDGIEMTFATNYLGHFLLT LLL  M++TA++TGV GRIVNV+S IHGWFSGD+I Y+  IS+ K
Sbjct:    1 MIETGKYLLGAAGASGFGSKSTAEEVTENC-DLRSVTVIITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSEFPETEIVVMELDLSSIASVRNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLKKMIQTAEETGVQGRIVNVTSGIHGWFSGDLIEYLRLISQPK 196          

HSP 2 Score: 104.375 bits (259), Expect = 1.241e-48
Identity = 46/58 (79.31%), Postives = 56/58 (96.55%), Query Frame = -2
Query:  993 QYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1166
            Q+DATRAYALSKLANVLHTKEL+ RL++++ANVTVNCVHPG+VRTRLTR+REGL+T +
Sbjct:  198 QFDATRAYALSKLANVLHTKELSSRLQKIEANVTVNCVHPGVVRTRLTRDREGLLTDL 255          

HSP 3 Score: 104.375 bits (259), Expect = 1.241e-48
Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = -3
Query:  572 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPLS 763
            QAAATTCYVAT+PRL+N+SGKYF DCNE   S LGSNS++A KLWAASEI+V++H+KA FDP S
Sbjct:  269 QAAATTCYVATNPRLVNVSGKYFTDCNETTPSGLGSNSSDATKLWAASEILVAQHSKASFDPCS 332          

HSP 4 Score: 35.039 bits (79), Expect = 1.241e-48
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DLVFFLASKL+KT+PQ
Sbjct:  254 DLVFFLASKLVKTVPQ 269          
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Match: O22985_ARATH (AT4g24050/T19F6_40 OS=Arabidopsis thaliana GN=T19F6.14 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 4.906e-91
Identity = 155/197 (78.68%), Postives = 177/197 (89.85%), Query Frame = -1
Query: 1321 MLETLKYLIGSTGVSGFGSKSTAEEVTETCPDLRSITVIITGATSGIGAETARVLAKRGARLVLPARNLKAAEEAKARIVSEFPESEIIVMALDLSSLTSVRNFVSELESLNLPVNILINNAGKFAHEHAISEDGIEMTFATNYLGHFXXXXXXXXXXXXTAKQTGVPGRIVNVSSSIHGWFSGDMIRYIGQISRSK 1911
            M+ET KYL+G+ G SGFGSKSTAEEVTE C DLRSIT +ITGATSGIGAETARVLAKRGARL+ PARN+KAAEEAK RIVSEFPE+EI+VM LDLSS+ SVRNFV++ ESL+LP+N+LINNAGK AHEHAISEDGIEMTFATNYLGHFLLT LLLN M++TA++TGV GRIVNV+S IHGWFSGD+I Y+  IS+ K
Sbjct:    1 MIETGKYLLGAAGASGFGSKSTAEEVTENC-DLRSITAVITGATSGIGAETARVLAKRGARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGWFSGDLIEYLRLISQPK 196          

HSP 2 Score: 103.99 bits (258), Expect = 3.712e-48
Identity = 46/64 (71.88%), Postives = 55/64 (85.94%), Query Frame = -3
Query:  572 QAAATTCYVATHPRLLNISGKYFADCNEAWTSKLGSNSNEAAKLWAASEIMVSKHAKAVFDPLS 763
            QAAATTCYVAT+PRL+N+SGKYF DCNE   S LG+NS+EA KLWAASEI+V++H+K  FDP S
Sbjct:  269 QAAATTCYVATNPRLVNVSGKYFTDCNETTPSGLGTNSSEATKLWAASEILVTQHSKTSFDPCS 332          

HSP 3 Score: 103.219 bits (256), Expect = 3.712e-48
Identity = 46/58 (79.31%), Postives = 55/58 (94.83%), Query Frame = -2
Query:  993 QYDATRAYALSKLANVLHTKELAQRLKQVDANVTVNCVHPGIVRTRLTREREGLITGI 1166
            Q+DATRAYALSKLANVLHTKEL+ RL+++ ANVTVNCVHPG+VRTRLTR+REGL+T +
Sbjct:  198 QFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGVVRTRLTRDREGLLTDL 255          

HSP 4 Score: 35.039 bits (79), Expect = 3.712e-48
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = -1
Query:  859 DLVFFLASKLLKTIPQ 906
            DLVFFLASKL+KT+PQ
Sbjct:  254 DLVFFLASKLVKTVPQ 269          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RDH14_MOUSE2.284e-2041.94Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 ... [more]
RDH14_HUMAN2.421e-2039.88Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 ... [more]
RDH12_BOVIN3.946e-2041.25Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE... [more]
WWOX_DROME2.267e-1944.78WW domain-containing oxidoreductase OS=Drosophila ... [more]
RDH12_HUMAN2.534e-1941.25Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 ... [more]
DHRSX_HUMAN6.971e-1938.19Dehydrogenase/reductase SDR family member on chrom... [more]
RDH11_HUMAN9.966e-1941.55Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 ... [more]
RDH11_MOUSE3.583e-1841.84Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 ... [more]
POR_PEA1.363e-1641.32Protochlorophyllide reductase, chloroplastic OS=Pi... [more]
PORB_HORVU9.167e-1638.02Protochlorophyllide reductase B, chloroplastic OS=... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092931 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M5W9U9_PRUPE6.945e-9984.69Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7TVM6_VITVI4.569e-9782.74Putative uncharacterized protein OS=Vitis vinifera... [more]
W9SF90_9ROSA1.936e-9478.79Short-chain dehydrogenase TIC 32 OS=Morus notabili... [more]
A0A022R0R1_ERYGU3.465e-9479.19Uncharacterized protein (Fragment) OS=Erythranthe ... [more]
B9GL13_POPTR1.990e-9380.71Short-chain dehydrogenase/reductase family protein... [more]
A0A022R3X5_ERYGU2.165e-9379.19Uncharacterized protein OS=Erythranthe guttata GN=... [more]
A0A068UUZ7_COFCA1.180e-9279.19Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
I1KPN7_SOYBN4.946e-9278.28Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
D7M8Y3_ARALL1.055e-9178.68Short-chain dehydrogenase/reductase family protein... [more]
O22985_ARATH4.906e-9178.68AT4g24050/T19F6_40 OS=Arabidopsis thaliana GN=T19F... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 37..54
score: 43.09
coord: 113..124
score: 43.53
coord: 163..179
score: 28.87
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 37..177
e-value: 9.0E-29
score: 100.2
IPR016040NAD(P)-binding domainGENE3D3.40.50.720coord: 31..180
e-value: 1.4E-42
score: 145.2
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 31..185
NoneNo IPR availablePANTHERPTHR24320FAMILY NOT NAMEDcoord: 13..179
NoneNo IPR availablePANTHERPTHR24320:SF100SUBFAMILY NOT NAMEDcoord: 13..179

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092931 ID=g.barbadense_cottongen_reftransV1_0092931; Name=g.barbadense_cottongen_reftransV1_0092931; organism=Gossypium barbadense; type=contig; length=2262bp
GCCCACTTATTCTCTTCTCTCCCTTTCTTCATTTTTTTTATTGCATATTC
TTCCTAAAGAAACCCATGAACATGTACCTTATATCTATTAATATTCATCC
TGATTAGGGTTTCCAAGTACTTCCACGATTCCAAGCAAAACCCCATCAGC
TCATTAACATATATATCCATCCGCCATAATCATTTTACAATTATCACTGG
ATCCCTTTCTTTATAATCCGTCTTTAAAAAATTAGTATGGGGGTATTATA
GGGCAATATATATGCAAATTATATAATACCAGTACTAATAATAATGGATA
GAAACAGTTTTATAAGTACAAAACCCTCTTCTTTTCCAGTACTAGGTAAG
CTTCTTAACATGTACCGAACCAACATAGCTATAATTTAAGGTGCATAATA
CTTGTATATCTAATTGTCTTTTAACTGATGTATACATATACACTATATTC
CTATCATCTTTTCTCTTCCAACTAAGATATTTCATATCTTTTGCTGTTTC
TGTTTCTAATTTCTAGTCTTCTTTTTTTTTTCATCTCTTTATTTTTATTA
CATATGGTGATAATCGAAGGCACTAAGCGGATCAAACACTGCTTTAGCGT
GTTTGGAAACCATGATTTCAGAGGCAGCCCAAAGCTTTGCAGCTTCGTTG
GAATTCGACCCCAGTTTGGATGTCCATGCTTCGTTGCAGTCTGCAAAGTA
TTTCCCACTTATATTTAGCAGTCTTGGATGCGTGGCGACGTAACAAGTCG
TGGCAGCTGCCTGTACCCTCGACAAATGAAAGTCCATTGTCCATCAAAAC
CACCCACTTCAACTCTCATTAATCAAAAGCTTTAATTACTTAAGATATAT
TAGTTTACCTGAGGAATGGTTTTCAGGAGCTTGGAAGCCAAAAAGAAAAC
CAGATCTGCAGGTTAATATATATTAGATTTTAACCAGAGAGAGTTGAAAG
TTGAAAACATTAAATAAAATCAAATGGCATCTTCTATATGTATATACCTG
TTATCAAGCCCTCACGTTCCCTGGTGAGACGGGTTCTAACAATACCTGGA
TGAACACAGTTCACAGTCACGTTGGCATCCACTTGCTTCAGTCTCTGGGC
AAGCTCCTTGGTATGCAAAACGTTAGCGAGCTTCGAGAGAGCATAAGCAC
GTGTCGCATCGTATTGACTGGGAACAGACAGCCAGACAAAAAACAGACAC
ATGAATTAAAAATCGATAGGAAATGTCAAATCCAAAAGAAAAGAAACCCA
ATCTTCTGTAACAATCATTTACTCCTATACTATGTTCGATTCTGTCACTG
TTATTTATCATTCTTCACCTTTTGCTTCTGGATATCTGGCCTATATATCG
GATCATATCGCCAGAAAACCATCCATGGATACTCGACGACACATTCACTA
TTCTTCCTGGAACACCTGTTTGTTTAGCCGTCTTCATCATCGTGTTTAGC
AACAACTTCGTCAACAAAAAATGACCAAGATAATTAGTGGCAAATGTCAT
CTCGATTCCATCCTCGGAGATTGCATGTTCATGCGCAAACTTCCCGGCAT
TGTTTATGAGGATATTGACTGGCAAGTTAAGAGACTCCAACTCCGATACA
AAATTTCGAACAGAAGTGAGTGAACTAAGATCAAGAGCCATGACAATAAT
TTCTGATTCAGGAAACTCGGAAACTATCCTAGCCTTTGCTTCCTCAGCGG
CTTTAAGGTTCCGAGCTGGAAGCACCAACCTCGCTCCTCGTTTGGCCAAC
ACTCTGGCCGTCTCAGCTCCGATCCCCGACGTCGCACCTGTGATGATGAC
TGTTATAGAGCGGAGATCAGGGCAAGTCTCGGTGACTTCCTCGGCGGTGG
ACTTAGAGCCGAAGCCGCTGACTCCTGTTGAGCCGATCAGGTACTTCAGA
GTCTCTAGCATTTCAACTTCCTTTTTTTTCTTTTAGATATGATACAATTT
TTGAGAGTTTAAAGTTGGGTGAAGAACACACAAAATGACGTAAAAATCAT
TTAAGAAAAACAAACAGCAATAAAGGGGTTTGTTTACTCTTGTGGGATTT
AAGGTTTACTATAGAAAGAAAAGATTATCAGAAATGAAAGTTTTAGGGGA
AAGGAGCTAAAAGCTAATCTGTTTCAAGGACAAAAGAGAAAGTGGGATCG
GATTTTATAATGGAGCTAGCTTTGGTGGGGGAGAATCCAATTGAGAGAAC
GAGAGAGAGAGAGAATGGATTATATGTTTGTCATTTGATTGATTATATTT
AACGAAAATTAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom