g.barbadense_cottongen_reftransV1_0092929, g.barbadense_cottongen_reftransV1_0092929 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092929
Unique Nameg.barbadense_cottongen_reftransV1_0092929
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1921
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.441e-66
Identity = 155/468 (33.12%), Postives = 257/468 (54.91%), Query Frame = -2
Query:  355 ENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATER 1755
            + D   L Q      + ++  +  WDE +    L+GPL    +  +   +V  +  GH G++ LA  ++G +F +V G S+  G+++A DTL  QS+G+     +G+ +QR  LIL++  +P   +++NT  ILL F QD  +S    +YA   +P L A  L   L K+LQ Q IV+P ++   +   ++ +  + +V    LG RG+A AN+IS +     L L++ L     +TW G+S +   +   FL LAIPS +M+C+E W++E+   L GLL    L  S  +I    A  V+MIP GL  AV  RV   LGA +  +A R AV+ ++  A   +L+VG++L L+ + LGY ++++ EV+  V  +LP+     L++++ CV  G  RG G Q  GA +N   YYIVG+P  ++L FV+ +   GLWLG++  + +   +  +  ++ +W+  A +A + 
Sbjct:   33 QQDVVNLDQGGCCPALRKLLPRGFWDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLLGVVDL--SGQAIIYEVATVVYMIPMGLGMAVCVRVGTALGAADTLQAKRSAVSGLLCTA-GTSLVVGTLLGLLNSQLGYIFTSDEEVIALVNQVLPIYIVFQLVEAVCCVFGGVLRGTGKQAFGAIVNAIMYYIVGLPLGIVLTFVVGMRIMGLWLGMLTCIFLAAVTFVVYAVQLDWKLAAEEAQKH 497          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 9.232e-65
Identity = 144/447 (32.21%), Postives = 248/447 (55.48%), Query Frame = -2
Query:  355 LAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSAL------------SICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATER 1656
            L+GPL    +  + I +VS +  GH G++ LA  ++  +F +V G S+ +G+++A DTL  QS+G+     +G+ +QR  L+L++  +P   +++NT  ILL F QD E+S    +Y    +P L    L   L K+LQ Q I +P ++   +   ++ +  + +V    LG RG+A AN IS +   + L+LY+ L     +TW G+S +   +   F  LA+PS +M+C+E W++E+   L GLL    L   A+            S  L   A V  IP GLS  V  RV   LGA +  +A R AV+ V+ + +  +L++G+++ +++N LG+ ++N+ +V+  V+ +LP+ +  ++ +++ CV  G  RG G Q  GA +N  +YYI+G+P  +LL FV+ +   GLWLG++  + +   +    T R +W+  A +A + 
Sbjct:   37 LSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHHLAYTAHVARIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSI-VGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKH 482          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 4.488e-61
Identity = 144/474 (30.38%), Postives = 252/474 (53.16%), Query Frame = -2
Query:  355 LAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQ------------------------------------NIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWE---QEARKATER 1656
            L+GPL    +  + I +VS +  GH G++ LA  ++  +F +V G S+ +G+++A DTL  QS+G+     +G+ +QR  L+L++  +P   +++NT  ILL F QD ++S    +Y    +P L    L   L K+LQ Q                                     I +P ++   +   ++ +  + +V    LG RG+A AN IS +   + L+LY+ L     +TW G+S +   +   F  LA+PS +M+C+E W++E+   L GLL    L  SA ++    A   +MIP GLS  V  RV   LGA +  +A R AV+ V+ + +  +L++G+++ +++N LG+ ++N+ +V+  V+ +LP+ +  ++ +++ CV  G  RG G Q  GA +N  +YYI+G+P  +LL FV+ +   GLWLG++  + +   +    T R +W+   +EA+K + R
Sbjct:   37 LSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDL--SAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSI-VGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGR 507          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR338C PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.121e-49
Identity = 131/411 (31.87%), Postives = 224/411 (54.50%), Query Frame = -2
Query:  433 PLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNI----VFPMMICSGITTFLHILICWVMVFKS--GLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICAL 1647
            PLI   L +    MV  + VGH G+  LA  S+ +  +++T  ++  G+AT+LDTLC Q+YG+ ++  +G+H+QR +   +++ IP A +W  + P+L +   + E+      +   ++    AY   + L +FLQ Q I    ++ + IC+     L++L+ + +V+    G+GF GAA+A  + N++ +  L+L+  L     K W GFS++AF +      LA    IM+  E  S+E++ L S       L  +A S     AA ++MIPF +  + STR++N +GA   + A ++  V +  +     +   IL+  RN++   YS + EV+K +A +LPLV      DSL  V     RG G Q +G+ +NL +YY+ GIP A++L++  ++   GLW+GI  A+
Sbjct:  238 PLIFTFLLEQIFPMVCSLTVGHLGKNELAAVSLASMTSNIT-LAIFEGIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAP----LNVLVSYTLVWNKYIGVGFIGAAIA-VVLNFWLMFFLLLFYALYIDGRKCWGGFSRKAFTHWNDLGHLAFSGIIMLEAEELSYELLTLFSAYYGVSYL--AAQSAVSTMAALLYMIPFAIGISTSTRIANFIGAKRTDFAHISSQVGLSFSFIAGFINCCILVFGRNLIANIYSKDPEVIKLIAQVLPLVGIVQNFDSLNAVAGSCLRGQGMQSLGSIVNLMAYYLFGIPLALILSWFFDMKLYGLWIGIGSAM 640          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: ERC1_YEAST (Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.315e-41
Identity = 117/397 (29.47%), Postives = 196/397 (49.37%), Query Frame = -2
Query:  553 KKIWDEVKKQVWL----AGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIW-INTTPILLFFGQDHEISMAAGEY---ACFMVPSLFAYGLLQCLVKFLQTQNIVFP----MMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLY---VKLSPSCAKTWTGF--SKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQK 1692
            +KI    K++  +    A PLI   + Q  + + S+  V H G   L G ++G+  A++TG + + G+ T LDTLC Q+YGAK Y ++G+ +QR  +I ++  +P+ ++W + +  IL     + E+   A  Y     F VP      L +C  +FLQ Q I       + +C+ +   ++ L+ W    K G+G+ GA L+  I+ W   L L++Y    K      K W G    ++AF N    + LAIP  +MV  E   FE++ + +  L    L   A SI    A+  + +PF +S + STRV+N +GA   ++  +   V ++++   + +   ++   +  +   +S E  VVK V   LPL+A   L D+     +G  RG G QK
Sbjct:  155 QKISTTFKRETQVITMNALPLIFTFILQNSLSLASIFSVSHLGTKELGGVTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAFLPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFI---LFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWND--KIGIGYLGAPLSVVINYWLMTLGLLIYAMTTKHKERPLKCWNGIIPKEQAFKNWRKMINLAIPGVVMVEAEFLGFEVLTIFASHLGTDAL--GAQSIVATIASLAYQVPFSISVSTSTRVANFIGASLYDSCMITCRVSLLLSFVCSSMNMFVICRYKEQIASLFSTESAVVKMVVDTLPLLAFMQLFDAFNASTAGCLRGQGRQK 544          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: K4BM46_SOLLC (MATE efflux family protein OS=Solanum lycopersicum GN=Solyc03g118970.2 PE=3 SV=1)

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 325/496 (65.52%), Postives = 399/496 (80.44%), Query Frame = -2
Query:  322 MEREDKKSLTSALIQITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1809
            ME E  KS +S    +  + +  ++      NG     +++I +EVK+QVWLAGPL+ V+L Q+ +Q++++M VGH GEL L+GASM  SF SVTG SLL+GM++ALDT CGQSYGAKQY MLGIHMQRAM+IL +VSIPLA IW NT  IL F GQD  IS  AG YA + +P +FAYGLLQC+V+FLQTQ+IV PM++C+G+TT +HI++CWV+VFK+GLG +GAALANSIS W N L L +Y+K SPSC KTWTG SKEA  ++ TF++LA+PSAIMVCLEMWSFE+MVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLSGAVSTRVSNELGA +P+ ARLA+ VV+ +A+ E L++G +++LIR + GYAYSNE EVV+Y+A ++PL+ATSN LD LQCVLSG  RG GWQKIGA INLGSYY+VGIPCAVLLAF L +GGKGLWLGIICAL VQV SL  +TIRTNWE EA+KA ERV +  +  EIV
Sbjct:    1 MEAEYGKS-SSVKTPLIDDREKQSILDGERKNG-GGFSKEEIVEEVKRQVWLAGPLVSVNLLQFSLQLIAIMFVGHLGELPLSGASMANSFTSVTGISLLMGMSSALDTFCGQSYGAKQYHMLGIHMQRAMIILSLVSIPLAVIWANTGHILKFLGQDPSISDEAGHYALYFIPGVFAYGLLQCVVRFLQTQSIVIPMVLCAGVTTLIHIVVCWVLVFKTGLGVKGAALANSISYWLNFLFLAIYIKFSPSCVKTWTGLSKEALKDMLTFIKLAVPSAIMVCLEMWSFELMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSGAVSTRVSNELGAAHPQLARLALYVVLTVAVMEGLVLGLVMILIRKVWGYAYSNETEVVRYIAIMMPLLATSNFLDGLQCVLSGAVRGFGWQKIGAIINLGSYYLVGIPCAVLLAFYLRIGGKGLWLGIICALLVQVLSLLFITIRTNWEAEAKKAQERVEETTLPVEIV 494          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: K7WNX8_SOLTU (MATE efflux family protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 329/496 (66.33%), Postives = 405/496 (81.65%), Query Frame = -2
Query:  322 MEREDKKSLTSALIQITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1809
            ME E  KS +S    +  + +  ++      NG     +++I DEVK+QVWLAGPL+ V+L Q+ +Q++S+M VGH G+L L+GASM  SF SVTG SLL+GM++ALDT CGQSYGAKQY MLGIHMQRAM++L +VS+PLA IW NT PIL   GQD  IS  AG+YA + +P +FAYGLLQC+V+FLQTQ+I+ PM++C+G+TT +H+++CW++VFK+GLG +GAALANSIS W N L LVLY+K SPSCAKTWTG SKEA  ++ TFLRLA+PSAIMVCLEMWSFE+MVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLSGAVSTRVSNELGA +P+ ARLA+ VV+ +A+ E L++G +L+LIR + G+AYSNE EVVKY+A ++PL+ATSN LD LQCVLSG  RG GWQKIGA INLGSYY+VGIPCAVLLAF L++GGKGLWLGIICAL VQV SL  +TIRTNWEQEA+KA ERV +  + AEIV
Sbjct:    1 MEAEYGKS-SSVKTPLIDDREKQSILDETRKNG-GGFSKEEIVDEVKRQVWLAGPLVSVNLLQFSLQLISIMFVGHLGKLPLSGASMANSFTSVTGISLLMGMSSALDTFCGQSYGAKQYHMLGIHMQRAMIVLSLVSVPLAVIWANTGPILKVLGQDPSISDEAGQYALYFIPGVFAYGLLQCVVRFLQTQSIIIPMVLCAGVTTLIHVVVCWILVFKTGLGVKGAALANSISYWLNFLFLVLYIKFSPSCAKTWTGLSKEALKDMLTFLRLAVPSAIMVCLEMWSFELMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSGAVSTRVSNELGAAHPQLARLALYVVLAVAVIEGLVLGLVLILIRKVWGFAYSNETEVVKYIAIMMPLLATSNFLDGLQCVLSGAVRGFGWQKIGAIINLGSYYLVGIPCAVLLAFYLHIGGKGLWLGIICALLVQVLSLLFITIRTNWEQEAKKAQERVEETTLPAEIV 494          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: W9QZP6_9ROSA (MATE efflux family protein OS=Morus notabilis GN=L484_020905 PE=3 SV=1)

HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 338/500 (67.60%), Postives = 407/500 (81.40%), Query Frame = -2
Query:  319 MEREDKK-SLTSALIQITPENDDFTLHQAVSSNGINE--VRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIVT 1809
            ME+ D K +LT+ LIQI  EN       +  S G++E   +RK+I +EVKKQ+WLAGP+I V L QY +QM+S+M VGH GE+ L+GASM TSFA+VTGFSLLLGMA AL+TL GQ+YGAKQY ++ ++MQR+M++L +VSIPLA IW NT PIL   GQ+ +I+  AG+YA  M+PSLFAYGLLQCLV+FLQTQNIVFPM++C+GI T LHI  CW++V KSGLG  GAA AN+IS W NVLLL LYVK S SC+KTWTGFS+EAF NI  F+RLAIPSA+M CLEMWSFEM+VLLSGLLPNP L+TS LS+ LNTAATVWMIPFGL  AVSTRVSNELGAG P+AARLAV VV+ MAI E LLVG +L+LIR I GYAYSNE+EVV Y+A ++P++A SN LD LQ VLSG ARGCGWQKIGAY+NLGSYY+VGIP AV+ AFVL++GGKGLWLG+ICAL VQV SL  + I+TNWEQEA+KATERVY+  +   +V+
Sbjct:    1 MEKGDHKPTLTAPLIQIREENG-----LSNGSGGVHEKGFKRKEILEEVKKQLWLAGPMISVGLLQYFLQMISIMFVGHLGEIPLSGASMATSFATVTGFSLLLGMAGALETLSGQAYGAKQYHLMSVYMQRSMIVLSLVSIPLAVIWANTGPILAAVGQEADIAAEAGQYARVMIPSLFAYGLLQCLVRFLQTQNIVFPMVVCAGIATVLHIFWCWILVLKSGLGSSGAAFANNISYWINVLLLALYVKFSSSCSKTWTGFSREAFQNILAFVRLAIPSALMTCLEMWSFEMVVLLSGLLPNPALETSVLSVSLNTAATVWMIPFGLGLAVSTRVSNELGAGRPQAARLAVFVVLAMAITEGLLVGLVLVLIRKIWGYAYSNELEVVNYLAEMMPILAVSNFLDGLQGVLSGTARGCGWQKIGAYVNLGSYYLVGIPLAVIFAFVLHIGGKGLWLGVICALVVQVLSLFTIAIKTNWEQEAKKATERVYESEVPVAVVS 495          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: A0A022RIH8_ERYGU (MATE efflux family protein OS=Erythranthe guttata GN=MIMGU_mgv1a005368mg PE=3 SV=1)

HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0
Identity = 337/501 (67.27%), Postives = 409/501 (81.64%), Query Frame = -2
Query:  319 KKMEREDKKSLTS-ALIQ-ITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIVT 1815
            ++ E ED   ++   LI+ IT +N+D                ++ I  E++KQ+WLAGPLI VSL Q+C+Q++SVM VGH GEL+L+GASM TSFASVTGFSL++GMA+ALDTLCGQSYGAKQY MLGIHMQRAML+L++V IPLA +W NT PIL   GQD +IS  AG YA FM+PS+FAYG+LQC VKFLQTQNIVFPMM+ SG+TT LH+  CW++V KSGLG RGAA+ANSIS W NV LL LY+  SPSC+KTW GFS+EA  N+  F+RLAIPSA+MVCLE WSFEMMVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLS AVSTRVSNELGAG+P AARLAV VV+ MAI E +LVG+ +++I+NI GYAYSNE+EVVKYVA ++P++A SN +D LQCVLSG  RGCGWQKIGA INLGSYY+VG+P A+LLAFVL++GGKGLWLG++CAL+VQV  L ++ +RTNWEQEA+KA ERVY+  I  EI++
Sbjct:    2 ERGEEEDASCVSRRPLIENITDKNND---------------SKETILAELRKQLWLAGPLITVSLLQFCLQLISVMFVGHLGELSLSGASMATSFASVTGFSLMMGMASALDTLCGQSYGAKQYHMLGIHMQRAMLVLLLVCIPLAIVWANTAPILTLLGQDPDISKEAGHYARFMIPSIFAYGILQCQVKFLQTQNIVFPMMLSSGVTTLLHLFWCWILVLKSGLGSRGAAVANSISYWTNVSLLCLYIVFSPSCSKTWNGFSREALRNVLNFIRLAIPSAVMVCLEAWSFEMMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSCAVSTRVSNELGAGHPRAARLAVGVVMFMAISEGILVGAFMLIIKNIWGYAYSNEIEVVKYVATMMPILAASNFIDGLQCVLSGTVRGCGWQKIGAIINLGSYYLVGLPVAILLAFVLHIGGKGLWLGLLCALSVQVVCLFVIMLRTNWEQEAKKAKERVYESTIPVEILS 487          
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: G7KM46_MEDTR (MATE efflux family protein OS=Medicago truncatula GN=MTR_6g081780 PE=3 SV=2)

HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 331/464 (71.34%), Postives = 394/464 (84.91%), Query Frame = -2
Query:  322 NEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAF--HNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1707
             E  R+K+ +EVK Q+WL+GPLI V+L  + I ++S+M VGH  EL+L+GASM TSFASVTGFSLL+GMA+ALDTLCGQSYGAKQY MLGIHMQRAM IL+IV+IPLA IW NT  IL+F GQDHEISM AG YA  MVPSLFAYGLLQCL +FLQTQNIVFPMM+ S +TT LH+ +CW MV+KSG G  GAA+A+SIS W NV++L LYVK SPSC KTW GFS+EA   +NI  FL+LAIPSA MVCLE+WSFE++VLLSGLLPNPKL+TS LSICLNT A VWMIPFGLSGA+S RVSNELGAGNP+AARLAV VV+V+AI E++LVG+++MLIRNI GYAYSNE EVVKYVA ++PL+A + L+D +  VLSG ARGCGWQKI A++NLGSYY+VGIP AV+LAFVL++GGKGLWLGIICAL V V  L+I+TIRT+WE+EA+KAT RVY+ AI+ EI+
Sbjct:   16 KEEERRKLVEEVKTQLWLSGPLISVTLLNFGISLISLMFVGHLSELSLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQYRMLGIHMQRAMFILMIVAIPLAIIWANTRSILIFLGQDHEISMEAGNYAKLMVPSLFAYGLLQCLNRFLQTQNIVFPMMLSSAVTTLLHLPLCWYMVYKSGFGSGGAAIASSISYWVNVIILSLYVKFSPSCQKTWNGFSREALAPNNIPIFLKLAIPSAAMVCLEIWSFELVVLLSGLLPNPKLETSVLSICLNTTAVVWMIPFGLSGAISVRVSNELGAGNPQAARLAVCVVVVIAIIESILVGAVVMLIRNIWGYAYSNEEEVVKYVANMMPLLAVTALVDGMTAVLSGTARGCGWQKICAFVNLGSYYLVGIPAAVVLAFVLHIGGKGLWLGIICALIVHVLCLTIITIRTDWEKEAKKATHRVYN-AITTEIL 478          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
S47A2_RABIT4.441e-6633.12Multidrug and toxin extrusion protein 2 OS=Oryctol... [more]
S47A2_PONAB9.232e-6532.21Multidrug and toxin extrusion protein 2 OS=Pongo a... [more]
S47A2_HUMAN4.488e-6130.38Multidrug and toxin extrusion protein 2 OS=Homo sa... [more]
YD338_YEAST1.121e-4931.87Uncharacterized transporter YDR338C OS=Saccharomyc... [more]
ERC1_YEAST4.315e-4129.47Ethionine resistance-conferring protein 1 OS=Sacch... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K4BM46_SOLLC0.000e+065.52MATE efflux family protein OS=Solanum lycopersicum... [more]
K7WNX8_SOLTU0.000e+066.33MATE efflux family protein OS=Solanum tuberosum PE... [more]
W9QZP6_9ROSA0.000e+067.60MATE efflux family protein OS=Morus notabilis GN=L... [more]
A0A022RIH8_ERYGU0.000e+067.27MATE efflux family protein OS=Erythranthe guttata ... [more]
G7KM46_MEDTR0.000e+071.34MATE efflux family protein OS=Medicago truncatula ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002528Multi antimicrobial extrusion proteinTIGRFAMTIGR00797TIGR00797coord: 77..474
e-value: 1.6E-97
score: 324.9
IPR002528Multi antimicrobial extrusion proteinPFAMPF01554MatEcoord: 77..237
e-value: 3.2E-36
score: 124.3
coord: 298..460
e-value: 6.6E-29
score: 100.5
NoneNo IPR availablePANTHERPTHR11206MULTIDRUG RESISTANCE PROTEINcoord: 24..33
coord: 58..508
NoneNo IPR availablePANTHERPTHR11206:SF173SUBFAMILY NOT NAMEDcoord: 24..33
coord: 58..508
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 412..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 269..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 289..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 349..368
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 369..392
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 309..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 494..519
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..244
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 467..471
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 442..466
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 393..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..348
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 472..493
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..441
NoneNo IPR availableTMHMMTMhelixcoord: 471..493
NoneNo IPR availableTMHMMTMhelixcoord: 290..312
NoneNo IPR availableTMHMMTMhelixcoord: 248..270
NoneNo IPR availableTMHMMTMhelixcoord: 216..238
NoneNo IPR availableTMHMMTMhelixcoord: 327..349
NoneNo IPR availableTMHMMTMhelixcoord: 444..466
NoneNo IPR availableTMHMMTMhelixcoord: 369..391
NoneNo IPR availableTMHMMTMhelixcoord: 110..132
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 406..423
NoneNo IPR availableTMHMMTMhelixcoord: 185..204

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092929 ID=g.barbadense_cottongen_reftransV1_0092929; Name=g.barbadense_cottongen_reftransV1_0092929; organism=Gossypium barbadense; type=contig; length=1921bp
TACTTATTACTTATTATTATTATTATTATTTTGTTATCCCTTAATTTTCT
CCTATTTTTAATTATTTGGTTTATTTTTGAATAATTTAAGAGCTTTATCT
TATTTGTTAATCACTCCCTCCTCGTTTATATATATATATGGATGTTTTTC
ATCATTAGTAAATGTAGAATGTGTTTTTTCTTTAAATGAGAACGATTCGT
CTTGCTGGAGTTGCTACTATCATAATAAACACTATTATTCAATTCAATCC
TGTCTCTCAACTTCCGTGGAAGTGCTAATTTCTCAAACTAGAAATCTCAA
GGTCGCCTAACAACTTCATGTCACAATTTCAGCTGAAATTGCATAATCAT
ATACTCTCTCCGTAGCTTTTCTCGCCTCTTGCTCCCAGTTTGTTCGAATG
GTAACAATACTAAGACTTGTAACTTGAACTGCAAGTGCACAGATGATCCC
AAGCCATAGCCCCTTTCCACCAACATTGAGTACAAAAGCTAACAAAACAG
CACATGGAATCCCAACTATATAGTAAGATCCCAAATTAATATATGCTCCA
ATCTTCTGCCACCCACAGCCTCTAGCATTGCCTGAGAGAACACACTGAAG
AGAATCTAAAAGGTTTGAAGTTGCTACTAATGGTAACAAAGCTGCTACGT
ATTTAACCACTTCGACTTCATTGCTATAAGCATAGCCCAAAATGTTTCGA
ATCAACATCAAGATGGATCCCACCAAAAGGGCCTCGAAGATGGCCATTAC
TATGACAACATTTACAGCTAAACGTGCTGCTTCCGGATTCCCTGCTCCTA
GTTCATTCGAGACTCGAGTGCTTACTGCACCACTGAGTCCAAAGGGTATC
ATCCAAACCGTGGCAGCAGTGTTAAGGCAAATAGAGAGTGCTGAAGTTTG
TAACTTTGGATTAGGAAGAAGACCTGATAGTAGAACCATCATTTCAAAGG
ACCACATCTCTAAGCAGACCATAATAGCCGATGGAATAGCAAGACGAAGG
AAAGTGAAAATATTGTGAAAGGCCTCCTTTGAAAATCCTGTCCATGTCTT
AGCACATGAAGGAGACAACTTAACGTACAGCACCAACAACAAGACATTGA
ACCAGTTGGAGATTGAATTGGCCAAGGCTGCTCCTCTAAACCCAAGCCCA
GATTTGAAAACCATGACCCAACAGATGAGAATGTGAAGGAAAGTTGTGAT
TCCAGAGCATATCATCATTGGGAATACGATATTTTGAGTTTGTAAGAACT
TGACTAGACATTGAAGGAGACCATATGCAAATAGACTGGGAACCATAAAA
CAAGCATACTCTCCAGCTGCCATGGATATTTCATGATCTTGGCCGAAAAA
AAGTAGAATGGGTGTAGTGTTTATCCATATAAAGGCAAGGGGTATGCTGA
CGATTACAAGAATGAGCATTGCCCTTTGCATGTGAATGCCCAGCATTGAA
TACTGTTTTGCCCCATACGATTGTCCGCAAAGGGTATCCAGGGCCGTTGC
CATTCCCAACAGCAAACTGAAACCTGTAACAGAAGCAAAGGAAGTACCCA
TTGAAGCACCAGCGAGAGCTAGCTCCCCAGCATGTCCAACCAACATCACT
GATACCATCTGTATACAGTACTGGAATAGGCTCACCCCTATGAGAGGACC
TGCCAGCCATACTTGTTTCTTCACTTCGTCCCATATTTTCTTTCTTCTAA
CTTCATTAATTCCATTGCTGCTCACTGCTTGATGTAGAGTGAAATCATCG
TTTTCTGGCGTTATCTGAATCAAAGCTGAAGTTAGAGACTTCTTGTCTTC
TCTCTCCATCTTCTTTCGAGGCTTGACGAAGAAGATGATGGGATCTTGGG
ATTGGGGTTCCCATTTAATAGCCAAGTGTGTTCATTTTTTCTTATTTTAA
GGATATTTTTGTTGGACTTCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE_fam
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
GO:0015238drug transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006855xenobiotic transmembrane transport
GO:0055085transmembrane transport