g.barbadense_cottongen_reftransV1_0092929, g.barbadense_cottongen_reftransV1_0092929 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 4.441e-66 Identity = 155/468 (33.12%), Postives = 257/468 (54.91%), Query Frame = -2 Query: 355 ENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATER 1755 + D L Q + ++ + WDE + L+GPL + + +V + GH G++ LA ++G +F +V G S+ G+++A DTL QS+G+ +G+ +QR LIL++ +P +++NT ILL F QD +S +YA +P L A L L K+LQ Q IV+P ++ + ++ + + +V LG RG+A AN+IS + L L++ L +TW G+S + + FL LAIPS +M+C+E W++E+ L GLL L S +I A V+MIP GL AV RV LGA + +A R AV+ ++ A +L+VG++L L+ + LGY ++++ EV+ V +LP+ L++++ CV G RG G Q GA +N YYIVG+P ++L FV+ + GLWLG++ + + + + ++ +W+ A +A + Sbjct: 33 QQDVVNLDQGGCCPALRKLLPRGFWDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLLGVVDL--SGQAIIYEVATVVYMIPMGLGMAVCVRVGTALGAADTLQAKRSAVSGLLCTA-GTSLVVGTLLGLLNSQLGYIFTSDEEVIALVNQVLPIYIVFQLVEAVCCVFGGVLRGTGKQAFGAIVNAIMYYIVGLPLGIVLTFVVGMRIMGLWLGMLTCIFLAAVTFVVYAVQLDWKLAAEEAQKH 497
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 9.232e-65 Identity = 144/447 (32.21%), Postives = 248/447 (55.48%), Query Frame = -2 Query: 355 LAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSAL------------SICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATER 1656 L+GPL + + I +VS + GH G++ LA ++ +F +V G S+ +G+++A DTL QS+G+ +G+ +QR L+L++ +P +++NT ILL F QD E+S +Y +P L L L K+LQ Q I +P ++ + ++ + + +V LG RG+A AN IS + + L+LY+ L +TW G+S + + F LA+PS +M+C+E W++E+ L GLL L A+ S L A V IP GLS V RV LGA + +A R AV+ V+ + + +L++G+++ +++N LG+ ++N+ +V+ V+ +LP+ + ++ +++ CV G RG G Q GA +N +YYI+G+P +LL FV+ + GLWLG++ + + + T R +W+ A +A + Sbjct: 37 LSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDLSAQAVIYEVATVTYMRHSHHLAYTAHVARIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSI-VGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKH 482
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.488e-61 Identity = 144/474 (30.38%), Postives = 252/474 (53.16%), Query Frame = -2 Query: 355 LAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQ------------------------------------NIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNP-EAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWE---QEARKATER 1656 L+GPL + + I +VS + GH G++ LA ++ +F +V G S+ +G+++A DTL QS+G+ +G+ +QR L+L++ +P +++NT ILL F QD ++S +Y +P L L L K+LQ Q I +P ++ + ++ + + +V LG RG+A AN IS + + L+LY+ L +TW G+S + + F LA+PS +M+C+E W++E+ L GLL L SA ++ A +MIP GLS V RV LGA + +A R AV+ V+ + + +L++G+++ +++N LG+ ++N+ +V+ V+ +LP+ + ++ +++ CV G RG G Q GA +N +YYI+G+P +LL FV+ + GLWLG++ + + + T R +W+ +EA+K + R Sbjct: 37 LSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQGWLKGQEEESPFQTPGLSILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVDL--SAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGVLSI-VGISLVLGTLISILKNQLGHIFTNDEDVIALVSQVLPVYSVFHVFEAICCVYGGVLRGTGKQAFGAAVNAITYYIIGLPLGILLTFVVRMRIMGLWLGMLACVFLATAAFVAYTARLDWKLAAEEAKKHSGR 507
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: YD338_YEAST (Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR338C PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.121e-49 Identity = 131/411 (31.87%), Postives = 224/411 (54.50%), Query Frame = -2 Query: 433 PLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNI----VFPMMICSGITTFLHILICWVMVFKS--GLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICAL 1647 PLI L + MV + VGH G+ LA S+ + +++T ++ G+AT+LDTLC Q+YG+ ++ +G+H+QR + +++ IP A +W + P+L + + E+ + ++ AY + L +FLQ Q I ++ + IC+ L++L+ + +V+ G+GF GAA+A + N++ + L+L+ L K W GFS++AF + LA IM+ E S+E++ L S L +A S AA ++MIPF + + STR++N +GA + A ++ V + + + IL+ RN++ YS + EV+K +A +LPLV DSL V RG G Q +G+ +NL +YY+ GIP A++L++ ++ GLW+GI A+ Sbjct: 238 PLIFTFLLEQIFPMVCSLTVGHLGKNELAAVSLASMTSNIT-LAIFEGIATSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINLTSRFLRVLILGAPAYIFFENLKRFLQAQGIFDAGIYVLTICAP----LNVLVSYTLVWNKYIGVGFIGAAIA-VVLNFWLMFFLLLFYALYIDGRKCWGGFSRKAFTHWNDLGHLAFSGIIMLEAEELSYELLTLFSAYYGVSYL--AAQSAVSTMAALLYMIPFAIGISTSTRIANFIGAKRTDFAHISSQVGLSFSFIAGFINCCILVFGRNLIANIYSKDPEVIKLIAQVLPLVGIVQNFDSLNAVAGSCLRGQGMQSLGSIVNLMAYYLFGIPLALILSWFFDMKLYGLWIGIGSAM 640
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Match: ERC1_YEAST (Ethionine resistance-conferring protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERC1 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.315e-41 Identity = 117/397 (29.47%), Postives = 196/397 (49.37%), Query Frame = -2 Query: 553 KKIWDEVKKQVWL----AGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIW-INTTPILLFFGQDHEISMAAGEY---ACFMVPSLFAYGLLQCLVKFLQTQNIVFP----MMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLY---VKLSPSCAKTWTGF--SKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQK 1692 +KI K++ + A PLI + Q + + S+ V H G L G ++G+ A++TG + + G+ T LDTLC Q+YGAK Y ++G+ +QR +I ++ +P+ ++W + + IL + E+ A Y F VP L +C +FLQ Q I + +C+ + ++ L+ W K G+G+ GA L+ I+ W L L++Y K K W G ++AF N + LAIP +MV E FE++ + + L L A SI A+ + +PF +S + STRV+N +GA ++ + V ++++ + + ++ + + +S E VVK V LPL+A L D+ +G RG G QK Sbjct: 155 QKISTTFKRETQVITMNALPLIFTFILQNSLSLASIFSVSHLGTKELGGVTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAFLPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFI---LFECGKRFLQCQGIFHASTIVLFVCAPLNALMNYLLVWND--KIGIGYLGAPLSVVINYWLMTLGLLIYAMTTKHKERPLKCWNGIIPKEQAFKNWRKMINLAIPGVVMVEAEFLGFEVLTIFASHLGTDAL--GAQSIVATIASLAYQVPFSISVSTSTRVANFIGASLYDSCMITCRVSLLLSFVCSSMNMFVICRYKEQIASLFSTESAVVKMVVDTLPLLAFMQLFDAFNASTAGCLRGQGRQK 544
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: K4BM46_SOLLC (MATE efflux family protein OS=Solanum lycopersicum GN=Solyc03g118970.2 PE=3 SV=1) HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0 Identity = 325/496 (65.52%), Postives = 399/496 (80.44%), Query Frame = -2 Query: 322 MEREDKKSLTSALIQITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1809 ME E KS +S + + + ++ NG +++I +EVK+QVWLAGPL+ V+L Q+ +Q++++M VGH GEL L+GASM SF SVTG SLL+GM++ALDT CGQSYGAKQY MLGIHMQRAM+IL +VSIPLA IW NT IL F GQD IS AG YA + +P +FAYGLLQC+V+FLQTQ+IV PM++C+G+TT +HI++CWV+VFK+GLG +GAALANSIS W N L L +Y+K SPSC KTWTG SKEA ++ TF++LA+PSAIMVCLEMWSFE+MVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLSGAVSTRVSNELGA +P+ ARLA+ VV+ +A+ E L++G +++LIR + GYAYSNE EVV+Y+A ++PL+ATSN LD LQCVLSG RG GWQKIGA INLGSYY+VGIPCAVLLAF L +GGKGLWLGIICAL VQV SL +TIRTNWE EA+KA ERV + + EIV Sbjct: 1 MEAEYGKS-SSVKTPLIDDREKQSILDGERKNG-GGFSKEEIVEEVKRQVWLAGPLVSVNLLQFSLQLIAIMFVGHLGELPLSGASMANSFTSVTGISLLMGMSSALDTFCGQSYGAKQYHMLGIHMQRAMIILSLVSIPLAVIWANTGHILKFLGQDPSISDEAGHYALYFIPGVFAYGLLQCVVRFLQTQSIVIPMVLCAGVTTLIHIVVCWVLVFKTGLGVKGAALANSISYWLNFLFLAIYIKFSPSCVKTWTGLSKEALKDMLTFIKLAVPSAIMVCLEMWSFELMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSGAVSTRVSNELGAAHPQLARLALYVVLTVAVMEGLVLGLVMILIRKVWGYAYSNETEVVRYIAIMMPLLATSNFLDGLQCVLSGAVRGFGWQKIGAIINLGSYYLVGIPCAVLLAFYLRIGGKGLWLGIICALLVQVLSLLFITIRTNWEAEAKKAQERVEETTLPVEIV 494
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: K7WNX8_SOLTU (MATE efflux family protein OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0 Identity = 329/496 (66.33%), Postives = 405/496 (81.65%), Query Frame = -2 Query: 322 MEREDKKSLTSALIQITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1809 ME E KS +S + + + ++ NG +++I DEVK+QVWLAGPL+ V+L Q+ +Q++S+M VGH G+L L+GASM SF SVTG SLL+GM++ALDT CGQSYGAKQY MLGIHMQRAM++L +VS+PLA IW NT PIL GQD IS AG+YA + +P +FAYGLLQC+V+FLQTQ+I+ PM++C+G+TT +H+++CW++VFK+GLG +GAALANSIS W N L LVLY+K SPSCAKTWTG SKEA ++ TFLRLA+PSAIMVCLEMWSFE+MVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLSGAVSTRVSNELGA +P+ ARLA+ VV+ +A+ E L++G +L+LIR + G+AYSNE EVVKY+A ++PL+ATSN LD LQCVLSG RG GWQKIGA INLGSYY+VGIPCAVLLAF L++GGKGLWLGIICAL VQV SL +TIRTNWEQEA+KA ERV + + AEIV Sbjct: 1 MEAEYGKS-SSVKTPLIDDREKQSILDETRKNG-GGFSKEEIVDEVKRQVWLAGPLVSVNLLQFSLQLISIMFVGHLGKLPLSGASMANSFTSVTGISLLMGMSSALDTFCGQSYGAKQYHMLGIHMQRAMIVLSLVSVPLAVIWANTGPILKVLGQDPSISDEAGQYALYFIPGVFAYGLLQCVVRFLQTQSIIIPMVLCAGVTTLIHVVVCWILVFKTGLGVKGAALANSISYWLNFLFLVLYIKFSPSCAKTWTGLSKEALKDMLTFLRLAVPSAIMVCLEMWSFELMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSGAVSTRVSNELGAAHPQLARLALYVVLAVAVIEGLVLGLVLILIRKVWGFAYSNETEVVKYIAIMMPLLATSNFLDGLQCVLSGAVRGFGWQKIGAIINLGSYYLVGIPCAVLLAFYLHIGGKGLWLGIICALLVQVLSLLFITIRTNWEQEAKKAQERVEETTLPAEIV 494
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: W9QZP6_9ROSA (MATE efflux family protein OS=Morus notabilis GN=L484_020905 PE=3 SV=1) HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0 Identity = 338/500 (67.60%), Postives = 407/500 (81.40%), Query Frame = -2 Query: 319 MEREDKK-SLTSALIQITPENDDFTLHQAVSSNGINE--VRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIVT 1809 ME+ D K +LT+ LIQI EN + S G++E +RK+I +EVKKQ+WLAGP+I V L QY +QM+S+M VGH GE+ L+GASM TSFA+VTGFSLLLGMA AL+TL GQ+YGAKQY ++ ++MQR+M++L +VSIPLA IW NT PIL GQ+ +I+ AG+YA M+PSLFAYGLLQCLV+FLQTQNIVFPM++C+GI T LHI CW++V KSGLG GAA AN+IS W NVLLL LYVK S SC+KTWTGFS+EAF NI F+RLAIPSA+M CLEMWSFEM+VLLSGLLPNP L+TS LS+ LNTAATVWMIPFGL AVSTRVSNELGAG P+AARLAV VV+ MAI E LLVG +L+LIR I GYAYSNE+EVV Y+A ++P++A SN LD LQ VLSG ARGCGWQKIGAY+NLGSYY+VGIP AV+ AFVL++GGKGLWLG+ICAL VQV SL + I+TNWEQEA+KATERVY+ + +V+ Sbjct: 1 MEKGDHKPTLTAPLIQIREENG-----LSNGSGGVHEKGFKRKEILEEVKKQLWLAGPMISVGLLQYFLQMISIMFVGHLGEIPLSGASMATSFATVTGFSLLLGMAGALETLSGQAYGAKQYHLMSVYMQRSMIVLSLVSIPLAVIWANTGPILAAVGQEADIAAEAGQYARVMIPSLFAYGLLQCLVRFLQTQNIVFPMVVCAGIATVLHIFWCWILVLKSGLGSSGAAFANNISYWINVLLLALYVKFSSSCSKTWTGFSREAFQNILAFVRLAIPSALMTCLEMWSFEMVVLLSGLLPNPALETSVLSVSLNTAATVWMIPFGLGLAVSTRVSNELGAGRPQAARLAVFVVLAMAITEGLLVGLVLVLIRKIWGYAYSNELEVVNYLAEMMPILAVSNFLDGLQGVLSGTARGCGWQKIGAYVNLGSYYLVGIPLAVIFAFVLHIGGKGLWLGVICALVVQVLSLFTIAIKTNWEQEAKKATERVYESEVPVAVVS 495
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: A0A022RIH8_ERYGU (MATE efflux family protein OS=Erythranthe guttata GN=MIMGU_mgv1a005368mg PE=3 SV=1) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 337/501 (67.27%), Postives = 409/501 (81.64%), Query Frame = -2 Query: 319 KKMEREDKKSLTS-ALIQ-ITPENDDFTLHQAVSSNGINEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAFHNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIVT 1815 ++ E ED ++ LI+ IT +N+D ++ I E++KQ+WLAGPLI VSL Q+C+Q++SVM VGH GEL+L+GASM TSFASVTGFSL++GMA+ALDTLCGQSYGAKQY MLGIHMQRAML+L++V IPLA +W NT PIL GQD +IS AG YA FM+PS+FAYG+LQC VKFLQTQNIVFPMM+ SG+TT LH+ CW++V KSGLG RGAA+ANSIS W NV LL LY+ SPSC+KTW GFS+EA N+ F+RLAIPSA+MVCLE WSFEMMVLLSGLLPNP+L+TS LSICLNTAATVWMIPFGLS AVSTRVSNELGAG+P AARLAV VV+ MAI E +LVG+ +++I+NI GYAYSNE+EVVKYVA ++P++A SN +D LQCVLSG RGCGWQKIGA INLGSYY+VG+P A+LLAFVL++GGKGLWLG++CAL+VQV L ++ +RTNWEQEA+KA ERVY+ I EI++ Sbjct: 2 ERGEEEDASCVSRRPLIENITDKNND---------------SKETILAELRKQLWLAGPLITVSLLQFCLQLISVMFVGHLGELSLSGASMATSFASVTGFSLMMGMASALDTLCGQSYGAKQYHMLGIHMQRAMLVLLLVCIPLAIVWANTAPILTLLGQDPDISKEAGHYARFMIPSIFAYGILQCQVKFLQTQNIVFPMMLSSGVTTLLHLFWCWILVLKSGLGSRGAAVANSISYWTNVSLLCLYIVFSPSCSKTWNGFSREALRNVLNFIRLAIPSAVMVCLEAWSFEMMVLLSGLLPNPQLETSVLSICLNTAATVWMIPFGLSCAVSTRVSNELGAGHPRAARLAVGVVMFMAISEGILVGAFMLIIKNIWGYAYSNEIEVVKYVATMMPILAASNFIDGLQCVLSGTVRGCGWQKIGAIINLGSYYLVGLPVAILLAFVLHIGGKGLWLGLLCALSVQVVCLFVIMLRTNWEQEAKKAKERVYESTIPVEILS 487
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Match: G7KM46_MEDTR (MATE efflux family protein OS=Medicago truncatula GN=MTR_6g081780 PE=3 SV=2) HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0 Identity = 331/464 (71.34%), Postives = 394/464 (84.91%), Query Frame = -2 Query: 322 NEVRRKKIWDEVKKQVWLAGPLIGVSLFQYCIQMVSVMLVGHAGELALAGASMGTSFASVTGFSLLLGMATALDTLCGQSYGAKQYSMLGIHMQRAMLILVIVSIPLAFIWINTTPILLFFGQDHEISMAAGEYACFMVPSLFAYGLLQCLVKFLQTQNIVFPMMICSGITTFLHILICWVMVFKSGLGFRGAALANSISNWFNVLLLVLYVKLSPSCAKTWTGFSKEAF--HNIFTFLRLAIPSAIMVCLEMWSFEMMVLLSGLLPNPKLQTSALSICLNTAATVWMIPFGLSGAVSTRVSNELGAGNPEAARLAVNVVIVMAIFEALLVGSILMLIRNILGYAYSNEVEVVKYVAALLPLVATSNLLDSLQCVLSGNARGCGWQKIGAYINLGSYYIVGIPCAVLLAFVLNVGGKGLWLGIICALAVQVTSLSIVTIRTNWEQEARKATERVYDYAISAEIV 1707 E R+K+ +EVK Q+WL+GPLI V+L + I ++S+M VGH EL+L+GASM TSFASVTGFSLL+GMA+ALDTLCGQSYGAKQY MLGIHMQRAM IL+IV+IPLA IW NT IL+F GQDHEISM AG YA MVPSLFAYGLLQCL +FLQTQNIVFPMM+ S +TT LH+ +CW MV+KSG G GAA+A+SIS W NV++L LYVK SPSC KTW GFS+EA +NI FL+LAIPSA MVCLE+WSFE++VLLSGLLPNPKL+TS LSICLNT A VWMIPFGLSGA+S RVSNELGAGNP+AARLAV VV+V+AI E++LVG+++MLIRNI GYAYSNE EVVKYVA ++PL+A + L+D + VLSG ARGCGWQKI A++NLGSYY+VGIP AV+LAFVL++GGKGLWLGIICAL V V L+I+TIRT+WE+EA+KAT RVY+ AI+ EI+ Sbjct: 16 KEEERRKLVEEVKTQLWLSGPLISVTLLNFGISLISLMFVGHLSELSLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQYRMLGIHMQRAMFILMIVAIPLAIIWANTRSILIFLGQDHEISMEAGNYAKLMVPSLFAYGLLQCLNRFLQTQNIVFPMMLSSAVTTLLHLPLCWYMVYKSGFGSGGAAIASSISYWVNVIILSLYVKFSPSCQKTWNGFSREALAPNNIPIFLKLAIPSAAMVCLEIWSFELVVLLSGLLPNPKLETSVLSICLNTTAVVWMIPFGLSGAISVRVSNELGAGNPQAARLAVCVVVVIAIIESILVGAVVMLIRNIWGYAYSNEEEVVKYVANMMPLLAVTALVDGMTAVLSGTARGCGWQKICAFVNLGSYYLVGIPAAVVLAFVLHIGGKGLWLGIICALIVHVLCLTIITIRTDWEKEAKKATHRVYN-AITTEIL 478 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092929 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092929 ID=g.barbadense_cottongen_reftransV1_0092929; Name=g.barbadense_cottongen_reftransV1_0092929; organism=Gossypium barbadense; type=contig; length=1921bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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