g.barbadense_cottongen_reftransV1_0092927, g.barbadense_cottongen_reftransV1_0092927 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK3_ARATH (Pollen receptor-like kinase 3 OS=Arabidopsis thaliana GN=PRK3 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 8.936e-50 Identity = 100/240 (41.67%), Postives = 148/240 (61.67%), Query Frame = 3 Query: 1203 SFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKRE-FVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH---SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSIT-EEGFDLPRWVQSVVREEWAAEVFDAE 1907 SF L DLM+A+AE+LG GS G++Y+ V+A G +V VKR++D+ RE F +M GK+ H NV+ A++Y EEKL+V +YM SL +LHG R H+ L W R+KI VARG+ LH +S ++ HGN+KSSN+LL +E IS++ L N + +++PE +Q +V+ KSDVY G+++LE++TG+ P Q T + G D+ WVQS + + E+ D E Sbjct: 350 SFGLPDLMKAAAEVLGNGSLGSAYKAVMANGLSVVVKRIRDMNKLAREAFDTEMQRFGKLRHPNVLTPLAYHYRREEKLVVSEYMPKSSLLYVLHGDRGVYHSELTWATRLKIIQGVARGMDFLHEEFASYDLPHGNLKSSNVLLSETYEPLISDYAFLPLLQPNNASQALFAFKSPEFVQNQQVSPKSDVYCLGIIVLEVMTGKFPSQYLNTGKGGTDIVEWVQSSIAQHKEEELIDPE 589 HSP 2 Score: 65.855 bits (159), Expect = 6.351e-10 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 3 Query: 399 TLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSD 746 +L L + G I + +L+ + L NRLSG+IPA L L L++QGN+FTG PP L LDLS+N+ G IP+ ++ L F N + GS +I+ D Sbjct: 118 SLLLSNNSFSGEIADDFFKETPQLKRVFLDNNRLSGKIPASLMQLAGLEELHMQGNQFTGEIPPLTDGNKVLKSLDLSNNDLEGEIPITISDRKNLEMKFEGNQRLCGSPLNIECD 233 HSP 3 Score: 62.003 bits (149), Expect = 1.054e-8 Identity = 59/215 (27.44%), Postives = 86/215 (40.00%), Query Frame = 3 Query: 306 IRHADRVKWNSSTSACD--WFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIP-ADFSNLTQLRSLYLQGNEFTGPFPP------------SVXXXXXXXXXD------------LSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDG---LNDFNVSNNNLKGSIPDSLS--KFPESSFAGNIGLCG 854 I D W + T C+ WFG+ C ++ + I +G LSG I D +L LR++ L N +GP PP S + D L +N +G IP + L L L +Q N+F+G +P + +DG L ++SNN+L+G IP ++S K E F GN LCG Sbjct: 38 ITKGDLNSWRTGTDPCNGKWFGIYCQKGQT------------VSGIHVTRLG--------------LSGTINIEDLKDLPNLRTIRLDNNLLSGPLPPFFKLPGLKSLLLSNNSFSGEIADDFFKETPQLKRVFLDNNRLSGKIPASLMQLAGLEELHMQGNQFTGEIPPL-TDGNKVLKSLDLSNNDLEGEIPITISDRKNLEMKFEGNQRLCG 225
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK1_PETIN (Pollen receptor-like kinase 1 OS=Petunia integrifolia GN=PRK1 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.846e-49 Identity = 115/293 (39.25%), Postives = 168/293 (57.34%), Query Frame = 3 Query: 1095 EEEAGTSSSKDD---ITGGSTEIERMMNN-------------KLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDV-AVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHS---SQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGF--DLPRWVQSVVREEWAAEVFDAE 1907 ++ A TSS+ DD ++G ST +N KL F + FDL+DL+RASAE+LG G+ G+SY+ +L G V VKR K + V+K +F M LG++ H N++PL A+YY EEKLLVYDY GSL + LHG++S L+W R+KI VA+ LA+LH+ S + HG++KSSN+LL + ++ L L N + Y+APE Q ++T K+DV+S G+L+LE LTG+ P G+ +L WV +++R+ +A FD E Sbjct: 374 DQNAFTSSAPDDHVTLSGNSTYSNNQHSNSNKAEAPTAAVVGKLSFVRDDRPRFDLQDLLRASAEVLGSGNLGSSYKALLMDGQAVVVKRFKQMNHVAKEDFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLVYDYASNGSLASHLHGNQSR----LDWSSRLKIVKGVAKALAYLHNELPSLALPHGHLKSSNVLLDKYLNPVLMDYTLVPLVNLAQVQHLLVAYKAPEYAQQGRITRKTDVWSLGILILETLTGKFPTNYLALSTGYGTELATWVDTIIRDNESA--FDKE 660 HSP 2 Score: 66.2402 bits (160), Expect = 5.224e-10 Identity = 67/212 (31.60%), Postives = 93/212 (43.87%), Query Frame = 3 Query: 279 QALLAFISGIR------HADRVKWNSSTSAC-----DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQ-GNEFTGPFPPS-VXXXXXXXXXDLSSNNFTGPIPLGVNS-------LTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCG 854 +ALL F S + H W S S C +W GV C V+ L+L L G I +++ L+ LR LS N G+ L + L+ + T P S V L DLS G P+ L Q+ L L+NN+F+GS+P + L N+SNN L+G IP +LS ++F+GN GLCG Sbjct: 85 EALLNFKSSLSTSSPRGHEVLGSWIPSNSPCSGNNGNWLGVLC--YEGDVWGLQLENLDLSGVIDIDSLLPLHFLRTLSFMNNSFKGQC---------LIGISLEPSSHCTCPIIASPVRSRMMLPGYDLSQEALFGKQPIQRQHPHLPGYLLPQVFELSLENNRFTGSIPHFPPNVLKVLNLSNNQLEGPIPPALSLMDPTTFSGNKGLCG 285
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK6_ARATH (Probable pollen receptor-like kinase 6 OS=Arabidopsis thaliana GN=PRK6 PE=2 SV=4) HSP 1 Score: 185.267 bits (469), Expect = 9.635e-49 Identity = 99/240 (41.25%), Postives = 148/240 (61.67%), Query Frame = 3 Query: 1203 SFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKRE-FVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH---SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQP-SITEEGFDLPRWVQSVVREEWAAEVFDAE 1907 SF L DLM+A+AE+LG GS G++Y+ V+ G +V VKR++D+ RE F ++M GK+ H N++ A++Y EEKL+V +YM SL +LHG R H+ L W R+KI VA G+ LH +S ++ HGN+KSSN+LL +E IS++ L + + ++ PE QT +V+ KSDVY G+++LE+LTG+ P Q + + G D+ +WVQS V E+ E+ D E Sbjct: 376 SFGLPDLMKAAAEVLGNGSLGSAYKAVMTTGLSVVVKRIRDMNQLAREPFDVEMRRFGKLRHPNILTPLAYHYRREEKLVVSEYMPKSSLLYVLHGDRGIYHSELTWATRLKIIQGVAHGMKFLHEEFASYDLPHGNLKSSNVLLSETYEPLISDYAFLPLLQPSNASQALFAFKTPEFAQTQQVSHKSDVYCLGIIILEILTGKFPSQYLNNGKGGTDIVQWVQSSVAEQKEEELIDPE 615
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK2_ARATH (Pollen receptor-like kinase 2 OS=Arabidopsis thaliana GN=PRK2 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.639e-48 Identity = 99/251 (39.44%), Postives = 147/251 (58.57%), Query Frame = 3 Query: 1173 KLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDV-AVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSSQNMI---HGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGR--APIQPSITEEGFDLPRWVQSVVREEWAAEVFDAE 1907 KL F + F+L+DL++ASAE+LG G G SY+ +L+ G+ + VKR K + + EF M LG++ HEN++P+ A+YY EEKL V D++ GSL A LHG +S L+W R I V RGL +LH + + HG++KSSN+LL E + ++GL + N + + Y++PE ++ +VT K+DV+ GVL+LE+LTG+ E DL WV+S + EW E+FD E Sbjct: 320 KLSFLRDDKGKFELQDLLKASAEILGSGCFGASYKTLLSNGSVMVVKRFKHMNSAGIDEFQEHMKRLGRLNHENLLPIVAYYYKKEEKLFVSDFVANGSLAAHLHGHKSLGQPSLDWPTRFNIVKGVGRGLLYLHKNLPSLMAPHGHLKSSNVLLSEKFEPLLMDYGLIPMINEESAQELMVAYKSPEYVKQSRVTKKTDVWGLGVLILEILTGKLLESFSQVDKESEEDLASWVRSSFKGEWTQELFDQE 570 HSP 2 Score: 108.612 bits (270), Expect = 2.450e-23 Identity = 76/200 (38.00%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 267 VEDKQALLAFISGI---RHADRVKWNSSTSACDWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPP-SVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCG 854 V + + LL F + + R WN C W GV CD R FV+ LRL L GSI + LN LR LS N+ G P +F L L+SLYL N+F P + + L +L L NNF G IP + +L L L N+F+G +P N N+SNN L G IP+S S F GN GLCG Sbjct: 22 VSETETLLKFKNSLVIGRANALESWNRRNPPCKWTGVLCD--RGFVWGLRLENLELSGSIDIEALMGLNSLRSLSFINNKFKGPFP-EFKKLVALKSLYLSNNQFDLEIPKDAFDGMGWLKKLHLEQNNFIGEIPTSLVKSPKLIELRLDGNRFTGQIPEFRHHP-NMLNLSNNALAGQIPNSFSTMDPKLFEGNKGLCG 217
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 6.513e-48 Identity = 115/286 (40.21%), Postives = 171/286 (59.79%), Query Frame = 3 Query: 1080 THAGPEEEAGTSSSKDDITGGSTEIE-RMMNNKLVFFKGSVYS---FDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRL---KDVAVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH-SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNT-----PPSRIAGYQAPEVIQ-THKVTVKSDVYSFGVLLLELLTGR-APIQPSITEEGFDLPRWVQSVVREEWAAE 1892 T A P + T S K + E E R+ N+ + F G S + +E LMRASAE+LG+GS G +Y+ VL V VKRL K S+ F M ++G + H N+VP+R+++ S+ E+L++YDY GSLF L+HGSRSS PL W +KIA VA+GL ++H +S ++HGN+KS+NILL D E ++++ L+ L ++++ P S + Y+APE+ + + + T K DVYSFGVL+ ELLTG+ A P + D+ WV+++ EE E Sbjct: 340 TRAVPVLNSDTESQKREKEVQFQETEQRIPNSGNLVFCGESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDS--SSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPH--DMLDWVRAMREEEEGTE 621 HSP 2 Score: 142.124 bits (357), Expect = 3.528e-34 Identity = 90/198 (45.45%), Postives = 120/198 (60.61%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSST--SACDWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIP--DSLSKFPESSFAGNIGLCG 854 D ALL+F S +++ ++ + C W GV+C R + L L G L G T+ RL++LRVLSL N L G IP D S+L L+SL+L N+F+G FPPS+ L RL L +S NNF+G IP +N+L +LT L L N+F+G+LPS++ L FNVS NNL G IP +LS+F SSF N GLCG Sbjct: 34 DAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGR--IVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCG 228
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: B9FJS7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18944 PE=4 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 1.667e-145 Identity = 276/550 (50.18%), Postives = 356/550 (64.73%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907 D+QALLAF + + H ++ W +T C W G+ C + V LRLP L+G I +T+G+L+ L+VLSLR+NRL+ +P D +++ L SLYLQ N +G P S++ DLS N+F G IPL V ++TQLT L LQNN SG +P + L N+SNNNL G IP SL KFP SSF GN LCG PL PC PSPSP P+PP T K L G IIAIA G ++ L+L++ L+IC+ K K+ + S A AG + K S+ I+ NKL+FF G Y+FDLEDL+RASAE+LGKGS GT+Y+ VL GTTV VKRLK+V KREF +M ++G++ H+N V LRA+YYS +EKLLVYDYM GSL A LHG+R++ T L+W R+KI+L ARG+AHLH+ IHGNIKSSNILL ISEFGL L P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++ E+ + LPRWVQSVVREEW +EVFDA+ Sbjct: 30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLLGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A0A0E0DT34_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 1.740e-145 Identity = 275/550 (50.00%), Postives = 355/550 (64.55%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907 D+QALLAF + + H ++ W +T C W G++C + V LRLP L G I +T+G+L+ L+VLSLR+NRL+ +P D +++ L SLYLQ N +G P S++ DLS N+F G IPL V ++TQLT L LQNN SG +P + L N+SNNNL G IP SL KFP SSF GN LCG PL PC PSPSP P+PP T K L G IIAIA G ++ L+ ++ L+IC+ K K+ + S A AG + K S+ I+ NKL+FF G Y+FDLEDL+RASAE+LGKGS GT+Y+ VL GTTV VKRLK+V KREF +M ++G++ H+N V LRA+YYS +EKLLVYDYM GSL A LHG+R++ T L+W R+KI+L ARG+AHLH+ IHGNIKSSNILL ISEFGL L P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++ E+ + LPRWVQSVVREEW +EVFDA+ Sbjct: 30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGIKCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLIFIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A2Y5T2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20356 PE=4 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 3.279e-145 Identity = 276/550 (50.18%), Postives = 355/550 (64.55%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907 D+QALLAF + + H ++ W +T C W G+ C + V LRLP L G I +T+G+L+ L+VLSLR+NRL+ +P D +++ L SLYLQ N +G P S++ DLS N+F G IPL V ++TQLT L LQNN SG +P + L N+SNNNL G IP SL KFP SSF GN LCG PL PC PSPSP P+PP T K L G IIAIA G ++ L+L++ L+IC+ K K+ + S A AG + K S+ I+ NKL+FF G Y+FDLEDL+RASAE+LGKGS GT+Y+ VL GTTV VKRLK+V KREF +M ++G++ H+N V LRA+YYS +EKLLVYDYM GSL A LHG+R++ T L+W R+KI+L ARG+AHLH+ IHGNIKSSNILL ISEFGL L P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++ E+ + LPRWVQSVVREEW +EVFDA+ Sbjct: 30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: Q75GM0_ORYSJ (Os05g0480400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0018K15.19 PE=2 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 3.279e-145 Identity = 276/550 (50.18%), Postives = 355/550 (64.55%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907 D+QALLAF + + H ++ W +T C W G+ C + V LRLP L G I +T+G+L+ L+VLSLR+NRL+ +P D +++ L SLYLQ N +G P S++ DLS N+F G IPL V ++TQLT L LQNN SG +P + L N+SNNNL G IP SL KFP SSF GN LCG PL PC PSPSP P+PP T K L G IIAIA G ++ L+L++ L+IC+ K K+ + S A AG + K S+ I+ NKL+FF G Y+FDLEDL+RASAE+LGKGS GT+Y+ VL GTTV VKRLK+V KREF +M ++G++ H+N V LRA+YYS +EKLLVYDYM GSL A LHG+R++ T L+W R+KI+L ARG+AHLH+ IHGNIKSSNILL ISEFGL L P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++ E+ + LPRWVQSVVREEW +EVFDA+ Sbjct: 30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A0A0D3G903_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 3.536e-145 Identity = 276/550 (50.18%), Postives = 356/550 (64.73%), Query Frame = 3 Query: 273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907 D+QALLAF + + H ++ W +T C W G++C + V LRLP L G I +T+G+L+ L+VLSLR+NRL+ +P D +++ L SLYLQ N +G P S++ DLS N+F G IPL V ++TQLT L LQNN SG +P + L N+SNNNL G IP SL KFP SSF GN LCG PL PC PSPSP P+PP T K L G IIAIA G ++ L+L++ L+IC+ K K+ + S A AG + K S+ I+ NKL+FF G Y+FDLEDL+RASAE+LGKGS GT+Y+ VL GTTV VKRLK+V KREF +M ++G++ H+N V LRA+YYS +EKLLVYDYM GSL A LHG+R++ T L+W R+KI+L ARG+AHLH+ IHGNIKSSNILL ISEFGL L P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++ E+ + LPRWVQSVVREEW +EVFDA+ Sbjct: 30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGIKCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLVQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092927 ID=g.barbadense_cottongen_reftransV1_0092927; Name=g.barbadense_cottongen_reftransV1_0092927; organism=Gossypium barbadense; type=contig; length=1907bpback to top |