g.barbadense_cottongen_reftransV1_0092927, g.barbadense_cottongen_reftransV1_0092927 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092927
Unique Nameg.barbadense_cottongen_reftransV1_0092927
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1907
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK3_ARATH (Pollen receptor-like kinase 3 OS=Arabidopsis thaliana GN=PRK3 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.936e-50
Identity = 100/240 (41.67%), Postives = 148/240 (61.67%), Query Frame = 3
Query: 1203 SFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKRE-FVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH---SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSIT-EEGFDLPRWVQSVVREEWAAEVFDAE 1907
            SF L DLM+A+AE+LG GS G++Y+ V+A G +V VKR++D+    RE F  +M   GK+ H NV+   A++Y  EEKL+V +YM   SL  +LHG R   H+ L W  R+KI   VARG+  LH   +S ++ HGN+KSSN+LL   +E  IS++    L   N     +  +++PE +Q  +V+ KSDVY  G+++LE++TG+ P Q   T + G D+  WVQS + +    E+ D E
Sbjct:  350 SFGLPDLMKAAAEVLGNGSLGSAYKAVMANGLSVVVKRIRDMNKLAREAFDTEMQRFGKLRHPNVLTPLAYHYRREEKLVVSEYMPKSSLLYVLHGDRGVYHSELTWATRLKIIQGVARGMDFLHEEFASYDLPHGNLKSSNVLLSETYEPLISDYAFLPLLQPNNASQALFAFKSPEFVQNQQVSPKSDVYCLGIIVLEVMTGKFPSQYLNTGKGGTDIVEWVQSSIAQHKEEELIDPE 589          

HSP 2 Score: 65.855 bits (159), Expect = 6.351e-10
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 3
Query:  399 TLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSD 746
            +L L   +  G I  +      +L+ + L  NRLSG+IPA    L  L  L++QGN+FTG  PP       L  LDLS+N+  G IP+ ++    L   F  N +  GS  +I+ D
Sbjct:  118 SLLLSNNSFSGEIADDFFKETPQLKRVFLDNNRLSGKIPASLMQLAGLEELHMQGNQFTGEIPPLTDGNKVLKSLDLSNNDLEGEIPITISDRKNLEMKFEGNQRLCGSPLNIECD 233          

HSP 3 Score: 62.003 bits (149), Expect = 1.054e-8
Identity = 59/215 (27.44%), Postives = 86/215 (40.00%), Query Frame = 3
Query:  306 IRHADRVKWNSSTSACD--WFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIP-ADFSNLTQLRSLYLQGNEFTGPFPP------------SVXXXXXXXXXD------------LSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDG---LNDFNVSNNNLKGSIPDSLS--KFPESSFAGNIGLCG 854
            I   D   W + T  C+  WFG+ C   ++            +  I    +G              LSG I   D  +L  LR++ L  N  +GP PP            S    +     D            L +N  +G IP  +  L  L  L +Q N+F+G +P + +DG   L   ++SNN+L+G IP ++S  K  E  F GN  LCG
Sbjct:   38 ITKGDLNSWRTGTDPCNGKWFGIYCQKGQT------------VSGIHVTRLG--------------LSGTINIEDLKDLPNLRTIRLDNNLLSGPLPPFFKLPGLKSLLLSNNSFSGEIADDFFKETPQLKRVFLDNNRLSGKIPASLMQLAGLEELHMQGNQFTGEIPPL-TDGNKVLKSLDLSNNDLEGEIPITISDRKNLEMKFEGNQRLCG 225          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK1_PETIN (Pollen receptor-like kinase 1 OS=Petunia integrifolia GN=PRK1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.846e-49
Identity = 115/293 (39.25%), Postives = 168/293 (57.34%), Query Frame = 3
Query: 1095 EEEAGTSSSKDD---ITGGSTEIERMMNN-------------KLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDV-AVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHS---SQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGF--DLPRWVQSVVREEWAAEVFDAE 1907
            ++ A TSS+ DD   ++G ST      +N             KL F +     FDL+DL+RASAE+LG G+ G+SY+ +L  G  V VKR K +  V+K +F   M  LG++ H N++PL A+YY  EEKLLVYDY   GSL + LHG++S     L+W  R+KI   VA+ LA+LH+   S  + HG++KSSN+LL       + ++ L  L N       +  Y+APE  Q  ++T K+DV+S G+L+LE LTG+ P        G+  +L  WV +++R+  +A  FD E
Sbjct:  374 DQNAFTSSAPDDHVTLSGNSTYSNNQHSNSNKAEAPTAAVVGKLSFVRDDRPRFDLQDLLRASAEVLGSGNLGSSYKALLMDGQAVVVKRFKQMNHVAKEDFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLVYDYASNGSLASHLHGNQSR----LDWSSRLKIVKGVAKALAYLHNELPSLALPHGHLKSSNVLLDKYLNPVLMDYTLVPLVNLAQVQHLLVAYKAPEYAQQGRITRKTDVWSLGILILETLTGKFPTNYLALSTGYGTELATWVDTIIRDNESA--FDKE 660          

HSP 2 Score: 66.2402 bits (160), Expect = 5.224e-10
Identity = 67/212 (31.60%), Postives = 93/212 (43.87%), Query Frame = 3
Query:  279 QALLAFISGIR------HADRVKWNSSTSAC-----DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQ-GNEFTGPFPPS-VXXXXXXXXXDLSSNNFTGPIPLGVNS-------LTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCG 854
            +ALL F S +       H     W  S S C     +W GV C      V+ L+L    L G I  +++  L+ LR LS   N   G+          L  + L+  +  T P   S V     L   DLS     G  P+           L Q+  L L+NN+F+GS+P    + L   N+SNN L+G IP +LS    ++F+GN GLCG
Sbjct:   85 EALLNFKSSLSTSSPRGHEVLGSWIPSNSPCSGNNGNWLGVLC--YEGDVWGLQLENLDLSGVIDIDSLLPLHFLRTLSFMNNSFKGQC---------LIGISLEPSSHCTCPIIASPVRSRMMLPGYDLSQEALFGKQPIQRQHPHLPGYLLPQVFELSLENNRFTGSIPHFPPNVLKVLNLSNNQLEGPIPPALSLMDPTTFSGNKGLCG 285          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK6_ARATH (Probable pollen receptor-like kinase 6 OS=Arabidopsis thaliana GN=PRK6 PE=2 SV=4)

HSP 1 Score: 185.267 bits (469), Expect = 9.635e-49
Identity = 99/240 (41.25%), Postives = 148/240 (61.67%), Query Frame = 3
Query: 1203 SFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKRE-FVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH---SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQP-SITEEGFDLPRWVQSVVREEWAAEVFDAE 1907
            SF L DLM+A+AE+LG GS G++Y+ V+  G +V VKR++D+    RE F ++M   GK+ H N++   A++Y  EEKL+V +YM   SL  +LHG R   H+ L W  R+KI   VA G+  LH   +S ++ HGN+KSSN+LL   +E  IS++    L   +     +  ++ PE  QT +V+ KSDVY  G+++LE+LTG+ P Q  +  + G D+ +WVQS V E+   E+ D E
Sbjct:  376 SFGLPDLMKAAAEVLGNGSLGSAYKAVMTTGLSVVVKRIRDMNQLAREPFDVEMRRFGKLRHPNILTPLAYHYRREEKLVVSEYMPKSSLLYVLHGDRGIYHSELTWATRLKIIQGVAHGMKFLHEEFASYDLPHGNLKSSNVLLSETYEPLISDYAFLPLLQPSNASQALFAFKTPEFAQTQQVSHKSDVYCLGIIILEILTGKFPSQYLNNGKGGTDIVQWVQSSVAEQKEEELIDPE 615          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: PRK2_ARATH (Pollen receptor-like kinase 2 OS=Arabidopsis thaliana GN=PRK2 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.639e-48
Identity = 99/251 (39.44%), Postives = 147/251 (58.57%), Query Frame = 3
Query: 1173 KLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDV-AVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSSQNMI---HGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGR--APIQPSITEEGFDLPRWVQSVVREEWAAEVFDAE 1907
            KL F +     F+L+DL++ASAE+LG G  G SY+ +L+ G+ + VKR K + +    EF   M  LG++ HEN++P+ A+YY  EEKL V D++  GSL A LHG +S     L+W  R  I   V RGL +LH +   +   HG++KSSN+LL    E  + ++GL  + N  +    +  Y++PE ++  +VT K+DV+  GVL+LE+LTG+          E   DL  WV+S  + EW  E+FD E
Sbjct:  320 KLSFLRDDKGKFELQDLLKASAEILGSGCFGASYKTLLSNGSVMVVKRFKHMNSAGIDEFQEHMKRLGRLNHENLLPIVAYYYKKEEKLFVSDFVANGSLAAHLHGHKSLGQPSLDWPTRFNIVKGVGRGLLYLHKNLPSLMAPHGHLKSSNVLLSEKFEPLLMDYGLIPMINEESAQELMVAYKSPEYVKQSRVTKKTDVWGLGVLILEILTGKLLESFSQVDKESEEDLASWVRSSFKGEWTQELFDQE 570          

HSP 2 Score: 108.612 bits (270), Expect = 2.450e-23
Identity = 76/200 (38.00%), Postives = 96/200 (48.00%), Query Frame = 3
Query:  267 VEDKQALLAFISGI---RHADRVKWNSSTSACDWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPP-SVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCG 854
            V + + LL F + +   R      WN     C W GV CD  R FV+ LRL    L GSI    +  LN LR LS   N+  G  P +F  L  L+SLYL  N+F    P  +   +  L +L L  NNF G IP  +    +L  L L  N+F+G +P       N  N+SNN L G IP+S S      F GN GLCG
Sbjct:   22 VSETETLLKFKNSLVIGRANALESWNRRNPPCKWTGVLCD--RGFVWGLRLENLELSGSIDIEALMGLNSLRSLSFINNKFKGPFP-EFKKLVALKSLYLSNNQFDLEIPKDAFDGMGWLKKLHLEQNNFIGEIPTSLVKSPKLIELRLDGNRFTGQIPEFRHHP-NMLNLSNNALAGQIPNSFSTMDPKLFEGNKGLCG 217          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 6.513e-48
Identity = 115/286 (40.21%), Postives = 171/286 (59.79%), Query Frame = 3
Query: 1080 THAGPEEEAGTSSSKDDITGGSTEIE-RMMNNKLVFFKGSVYS---FDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRL---KDVAVSKREFVMKMGMLGKIMHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLH-SSQNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNT-----PPSRIAGYQAPEVIQ-THKVTVKSDVYSFGVLLLELLTGR-APIQPSITEEGFDLPRWVQSVVREEWAAE 1892
            T A P   + T S K +      E E R+ N+  + F G   S   + +E LMRASAE+LG+GS G +Y+ VL     V VKRL   K    S+  F   M ++G + H N+VP+R+++ S+ E+L++YDY   GSLF L+HGSRSS   PL W   +KIA  VA+GL ++H +S  ++HGN+KS+NILL  D E  ++++ L+ L ++++     P S  + Y+APE+ + + + T K DVYSFGVL+ ELLTG+ A   P +     D+  WV+++  EE   E
Sbjct:  340 TRAVPVLNSDTESQKREKEVQFQETEQRIPNSGNLVFCGESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRAKPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDS--SSYKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFMAPH--DMLDWVRAMREEEEGTE 621          

HSP 2 Score: 142.124 bits (357), Expect = 3.528e-34
Identity = 90/198 (45.45%), Postives = 120/198 (60.61%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSST--SACDWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIP--DSLSKFPESSFAGNIGLCG 854
            D  ALL+F S     +++ ++ +     C W GV+C   R  +  L L G  L G     T+ RL++LRVLSL  N L G IP D S+L  L+SL+L  N+F+G FPPS+  L RL  L +S NNF+G IP  +N+L +LT L L  N+F+G+LPS++   L  FNVS NNL G IP   +LS+F  SSF  N GLCG
Sbjct:   34 DAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVKCAQGR--IVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCG 228          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: B9FJS7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18944 PE=4 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 1.667e-145
Identity = 276/550 (50.18%), Postives = 356/550 (64.73%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907
            D+QALLAF + + H  ++ W  +T  C  W G+ C  +   V  LRLP   L+G I  +T+G+L+ L+VLSLR+NRL+  +P D +++  L SLYLQ N  +G  P S++        DLS N+F G IPL V ++TQLT L LQNN  SG +P +    L   N+SNNNL G IP SL KFP SSF GN  LCG PL PC    PSPSP  P+PP T     K L  G IIAIA G  ++ L+L++ L+IC+ K K+       +  S   A     AG  + K      S+ I+    NKL+FF G  Y+FDLEDL+RASAE+LGKGS GT+Y+ VL  GTTV VKRLK+V   KREF  +M ++G++  H+N V LRA+YYS +EKLLVYDYM  GSL A LHG+R++  T L+W  R+KI+L  ARG+AHLH+      IHGNIKSSNILL       ISEFGL  L      P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++    E+  + LPRWVQSVVREEW +EVFDA+
Sbjct:   30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLLGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A0A0E0DT34_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 1.740e-145
Identity = 275/550 (50.00%), Postives = 355/550 (64.55%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907
            D+QALLAF + + H  ++ W  +T  C  W G++C  +   V  LRLP   L G I  +T+G+L+ L+VLSLR+NRL+  +P D +++  L SLYLQ N  +G  P S++        DLS N+F G IPL V ++TQLT L LQNN  SG +P +    L   N+SNNNL G IP SL KFP SSF GN  LCG PL PC    PSPSP  P+PP T     K L  G IIAIA G  ++ L+ ++ L+IC+ K K+       +  S   A     AG  + K      S+ I+    NKL+FF G  Y+FDLEDL+RASAE+LGKGS GT+Y+ VL  GTTV VKRLK+V   KREF  +M ++G++  H+N V LRA+YYS +EKLLVYDYM  GSL A LHG+R++  T L+W  R+KI+L  ARG+AHLH+      IHGNIKSSNILL       ISEFGL  L      P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++    E+  + LPRWVQSVVREEW +EVFDA+
Sbjct:   30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGIKCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLIFIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A2Y5T2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20356 PE=4 SV=1)

HSP 1 Score: 447.973 bits (1151), Expect = 3.279e-145
Identity = 276/550 (50.18%), Postives = 355/550 (64.55%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907
            D+QALLAF + + H  ++ W  +T  C  W G+ C  +   V  LRLP   L G I  +T+G+L+ L+VLSLR+NRL+  +P D +++  L SLYLQ N  +G  P S++        DLS N+F G IPL V ++TQLT L LQNN  SG +P +    L   N+SNNNL G IP SL KFP SSF GN  LCG PL PC    PSPSP  P+PP T     K L  G IIAIA G  ++ L+L++ L+IC+ K K+       +  S   A     AG  + K      S+ I+    NKL+FF G  Y+FDLEDL+RASAE+LGKGS GT+Y+ VL  GTTV VKRLK+V   KREF  +M ++G++  H+N V LRA+YYS +EKLLVYDYM  GSL A LHG+R++  T L+W  R+KI+L  ARG+AHLH+      IHGNIKSSNILL       ISEFGL  L      P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++    E+  + LPRWVQSVVREEW +EVFDA+
Sbjct:   30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: Q75GM0_ORYSJ (Os05g0480400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0018K15.19 PE=2 SV=1)

HSP 1 Score: 447.973 bits (1151), Expect = 3.279e-145
Identity = 276/550 (50.18%), Postives = 355/550 (64.55%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907
            D+QALLAF + + H  ++ W  +T  C  W G+ C  +   V  LRLP   L G I  +T+G+L+ L+VLSLR+NRL+  +P D +++  L SLYLQ N  +G  P S++        DLS N+F G IPL V ++TQLT L LQNN  SG +P +    L   N+SNNNL G IP SL KFP SSF GN  LCG PL PC    PSPSP  P+PP T     K L  G IIAIA G  ++ L+L++ L+IC+ K K+       +  S   A     AG  + K      S+ I+    NKL+FF G  Y+FDLEDL+RASAE+LGKGS GT+Y+ VL  GTTV VKRLK+V   KREF  +M ++G++  H+N V LRA+YYS +EKLLVYDYM  GSL A LHG+R++  T L+W  R+KI+L  ARG+AHLH+      IHGNIKSSNILL       ISEFGL  L      P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++    E+  + LPRWVQSVVREEW +EVFDA+
Sbjct:   30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGITCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLAQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573          
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Match: A0A0D3G903_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1)

HSP 1 Score: 447.973 bits (1151), Expect = 3.536e-145
Identity = 276/550 (50.18%), Postives = 356/550 (64.73%), Query Frame = 3
Query:  273 DKQALLAFISGIRHADRVKWNSSTSAC-DWFGVQCDANRSFVYTLRLPGAALIGSILPNTIGRLNRLRVLSLRANRLSGEIPADFSNLTQLRSLYLQGNEFTGPFPPSVXXXXXXXXXDLSSNNFTGPIPLGVNSLTQLTGLFLQNNKFSGSLPSIDSDGLNDFNVSNNNLKGSIPDSLSKFPESSFAGNIGLCGGXXXXXXXXXXXXXXXXXXXXKTSGQSSKSLPTXXXXXXXXXXXXXXXXXXXXXXXCLXXXXXXXXXXXXAIPSTTHAGPEEEAGTSSSKDDITGGSTEIERMMNNKLVFFKGSVYSFDLEDLMRASAEMLGKGSTGTSYRVVLAVGTTVAVKRLKDVAVSKREFVMKMGMLGKI-MHENVVPLRAFYYSDEEKLLVYDYMHGGSLFALLHGSRSSVHTPLEWDHRMKIALSVARGLAHLHSS--QNMIHGNIKSSNILLRPDHETYISEFGLNSLFNTNTPPSRIAGYQAPEVIQTHKVTVKSDVYSFGVLLLELLTGRAPIQPSITEEGFD-LPRWVQSVVREEWAAEVFDAE 1907
            D+QALLAF + + H  ++ W  +T  C  W G++C  +   V  LRLP   L G I  +T+G+L+ L+VLSLR+NRL+  +P D +++  L SLYLQ N  +G  P S++        DLS N+F G IPL V ++TQLT L LQNN  SG +P +    L   N+SNNNL G IP SL KFP SSF GN  LCG PL PC    PSPSP  P+PP T     K L  G IIAIA G  ++ L+L++ L+IC+ K K+       +  S   A     AG  + K      S+ I+    NKL+FF G  Y+FDLEDL+RASAE+LGKGS GT+Y+ VL  GTTV VKRLK+V   KREF  +M ++G++  H+N V LRA+YYS +EKLLVYDYM  GSL A LHG+R++  T L+W  R+KI+L  ARG+AHLH+      IHGNIKSSNILL       ISEFGL  L      P+R+ GY+APEV++T + T KSDVYS+GVLLLE+LTG+AP++    E+  + LPRWVQSVVREEW +EVFDA+
Sbjct:   30 DRQALLAFAASVPHGRKLNWTLTTQVCTSWVGIKCTPDGRRVRELRLPAVGLFGPIPSDTLGKLDALQVLSLRSNRLTISLPPDVASIPSLHSLYLQHNNLSGIIPTSLSSNLTFL--DLSYNSFDGEIPLKVQNITQLTALLLQNNSLSGPIPDLHLPNLRHLNLSNNNLSGPIPPSLQKFPASSFFGNAFLCGLPLEPCPGTAPSPSPMSPLPPNTKKSFWKRLSLGVIIAIAAGGGLLLLILIVVLLICIFKRKKDGEPGIASFSSKGKAA----AGGRAEKSKQEYSSSGIQEAERNKLIFFNGCSYNFDLEDLLRASAEVLGKGSYGTTYKAVLEDGTTVVVKRLKEVVAGKREFEQQMEIIGRVGQHQNAVQLRAYYYSKDEKLLVYDYMTPGSLCAALHGNRTAGRTTLDWATRVKISLEAARGIAHLHAEGGGKFIHGNIKSSNILLSQGLSACISEFGLVQLMAIPHIPARLIGYRAPEVLETKRQTQKSDVYSYGVLLLEMLTGKAPLRSPGREDSIEHLPRWVQSVVREEWTSEVFDAD 573          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
PRK3_ARATH8.936e-5041.67Pollen receptor-like kinase 3 OS=Arabidopsis thali... [more]
PRK1_PETIN1.846e-4939.25Pollen receptor-like kinase 1 OS=Petunia integrifo... [more]
PRK6_ARATH9.635e-4941.25Probable pollen receptor-like kinase 6 OS=Arabidop... [more]
PRK2_ARATH1.639e-4839.44Pollen receptor-like kinase 2 OS=Arabidopsis thali... [more]
Y5720_ARATH6.513e-4840.21Probable inactive receptor kinase At5g67200 OS=Ara... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092927 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9FJS7_ORYSJ1.667e-14550.18Putative uncharacterized protein OS=Oryza sativa s... [more]
A0A0E0DT34_9ORYZ1.740e-14550.00Uncharacterized protein OS=Oryza meridionalis PE=4... [more]
A2Y5T2_ORYSI3.279e-14550.18Putative uncharacterized protein OS=Oryza sativa s... [more]
Q75GM0_ORYSJ3.279e-14550.18Os05g0480400 protein OS=Oryza sativa subsp. japoni... [more]
A0A0D3G903_9ORYZ3.536e-14550.18Uncharacterized protein OS=Oryza barthii PE=4 SV=1[more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092927 ID=g.barbadense_cottongen_reftransV1_0092927; Name=g.barbadense_cottongen_reftransV1_0092927; organism=Gossypium barbadense; type=contig; length=1907bp
GACTACAATGCAGCTATAAGGTCCTGGCTGTCTTCAAAGTTAAAACAGTT
CCCTTCCACCTTACGTTCCTCTTTCTTTCATGGGTTCTCACCGGAAAATC
GTTTCCGGTTCCGACTAGCCGCCGGAGGAAACTACGGCAACTTAAAAGAA
AACCATTTCTTTCCTCATTGTTTTACTACTAAAATCCCATAATGCCGGTC
GTGAATTTTGTCTGTGTTTTTTTAGTTTCAGTTGTGATGTTGAATTCGAG
AGTAAGCTCAGAACCGGTTGAAGACAAGCAAGCTCTACTTGCTTTCATTT
CGGGAATTAGACATGCCGACCGGGTTAAATGGAATTCATCGACCTCAGCC
TGTGATTGGTTCGGTGTTCAATGCGATGCCAACCGGTCTTTCGTCTACAC
TTTACGGCTCCCCGGTGCGGCCCTCATCGGTTCGATTCTGCCCAATACAA
TCGGTCGGTTGAACCGACTTCGAGTTTTAAGTCTACGAGCAAACCGTTTG
TCCGGTGAGATCCCTGCCGATTTCTCCAATTTGACTCAGCTCCGTAGCCT
TTATTTGCAAGGTAACGAGTTCACCGGTCCGTTCCCACCTAGTGTGACTC
GTTTAACTCGTTTGACTCGCCTTGATCTTTCTTCTAATAATTTCACCGGT
CCAATTCCTTTGGGTGTCAACAGTTTGACTCAGTTGACCGGACTCTTCTT
GCAAAATAACAAGTTTTCCGGTTCTCTCCCGAGCATCGACTCGGACGGTT
TAAACGATTTCAATGTGTCTAACAACAACCTTAAAGGTTCAATCCCCGAT
TCGTTATCTAAATTCCCCGAATCTTCATTCGCCGGAAACATTGGGCTTTG
CGGCGGTCCACTTCGGCCATGTAACCCATTTCCTCCATCTCCATCTCCGA
CTGAGCCCATTCCGCCCAAAACTTCCGGTCAAAGCTCGAAAAGCCTTCCC
ACCGGCGCCATCATTGCCATTGCCGTGGGGTCAGCAATTGTTGCGTTACT
GTTATTACTATTCCTCATTATCTGCCTCCGCAAATGGAAACGGAAGTCAC
CAAGGCGGCGGAAGGCAATACCATCGACGACACATGCAGGTCCGGAGGAG
GAGGCGGGGACTTCCTCGTCGAAAGATGATATAACCGGAGGCTCAACGGA
AATCGAAAGGATGATGAATAATAAGCTCGTGTTCTTCAAAGGTAGCGTTT
ACAGTTTCGATTTGGAGGATTTGATGAGGGCGTCGGCTGAAATGTTGGGA
AAAGGCAGCACCGGAACGTCGTACAGGGTGGTTTTAGCGGTGGGGACGAC
GGTGGCAGTTAAACGGTTGAAAGACGTGGCGGTTAGTAAACGAGAGTTCG
TAATGAAGATGGGAATGTTGGGTAAAATCATGCATGAAAACGTGGTTCCT
TTGAGAGCGTTTTATTATTCCGACGAGGAGAAATTGCTGGTTTATGATTA
CATGCATGGTGGAAGCTTGTTTGCGCTGCTTCACGGTAGCAGAAGTTCGG
TTCATACACCGTTAGAATGGGACCATCGGATGAAAATAGCCCTAAGCGTG
GCTAGAGGCCTCGCGCACCTCCACAGTTCACAAAACATGATCCACGGCAA
CATTAAATCTTCCAACATCCTTCTCCGACCAGACCACGAAACCTACATCT
CAGAGTTCGGTCTTAACTCTCTTTTCAACACCAACACTCCACCTAGTCGC
ATCGCGGGTTACCAAGCACCTGAAGTAATTCAAACCCATAAAGTTACGGT
GAAGTCAGACGTTTATAGTTTCGGGGTGTTATTATTGGAATTATTAACCG
GTAGGGCACCAATCCAACCATCAATAACTGAAGAAGGGTTCGATCTTCCG
CGTTGGGTCCAATCCGTGGTTCGGGAGGAATGGGCGGCCGAGGTGTTTGA
CGCAGAG
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