g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 4.145e-8 Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = -1 Query: 4400 RNPITESERELAVVGGKGKFRMAKGYAQLKTY-TVNFKTGDAIVEYNVTVIH 4552 RNPI EREL ++GG G FR A+GYA KTY VN DA+VEYNV + H Sbjct: 145 RNPILLEERELPIIGGTGDFRFARGYALPKTYKVVNI---DAVVEYNVFIWH 193
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR20_ARATH (Dirigent protein 20 OS=Arabidopsis thaliana GN=DIR20 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 9.773e-8 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN RE+ +VGG G FR A+GY + +T +N K GDA VEY+ V+HY Sbjct: 136 RNTALSEVREMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYVLHY 187
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR3_ARATH (Dirigent protein 3 OS=Arabidopsis thaliana GN=DIR3 PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.305e-7 Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + RE+ VVGG G FR A+GY + +T + KTGDA VE N ++HY Sbjct: 140 RNTVMSKVREMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILHY 191
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR7_ARATH (Dirigent protein 7 OS=Arabidopsis thaliana GN=DIR7 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.577e-7 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + RE+ V+GG G FR A+GY + +T + K+GDA VEY+ V+HY Sbjct: 135 RNAVLTKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYVLHY 186
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: M5VJC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000770mg PE=4 SV=1) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 442/841 (52.56%), Postives = 567/841 (67.42%), Query Frame = 2 Query: 116 MEEKRRDAGNS--PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQ-AKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENAT--SPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQP-SVTRVSNT-ITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 MEEKRRDA + P+ S EP++ RRR GAQKRKA+SL GS+SSSTPSKR TREK+ GPLTRARQG S A G+ + V E+V EL K ELEALEA +EAEFEA+RSR++NAHVVP+HCGWFSW K H +EE +LPSFFNGKS RTPD YLEIRN IMK FHANP V IE KDL ++EVGD DARQEV+EFLD+WGLINF P PP SAV SA+GD G+A+KDSL++ L+HFE ++SR SVVPK N++TP++PSG PESA+ ++L+R EGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCF+N KF SGMSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F + +D +ID ++KETA P + ++E+ K+ ETTE+KT + +T P+ETSK E VG ++ S+ + +VK +ET K ED K E E+ AL A++EAFE VGY TSE +LSFA+VGNP MALA F A LVGP++A AS+ +SLKS+S + P +LAAR+CF+LEDPP D KE SV + Q ED+S K D +S G E+ ++S + + PSP + + +E ++EE + NLN+S + KD P +V ++ ++ + ++ PS+ +E+G + +PS+P K+VDM DS+ K++P S V E +AS++L+ ++ S+ Q+ V + E P + S DV +VS QP E+ + QPV SNS+ E G + Sbjct: 1 MEEKRRDAAGAQPPSNAESPAAEPSSARRRGGAQKRKASSLGGSTSSSTPSKRFTREKAMLSHPPIHN---GPLTRARQGPSSLGSASASGAAVKPTVAKRPDPVGEAV-----AELVKRESELEALEASMEAEFEAIRSRNANAHVVPSHCGWFSWTKVHPIEEQMLPSFFNGKSETRTPDAYLEIRNCIMKIFHANPGVFIELKDLLELEVGDFDARQEVMEFLDHWGLINFDPSPPTGSAVASAEGD--GLAEKDSLVDKLYHFEALQSRSSVVPKTNITTPTVPSGLFPESAIAEELVRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNGKFDSGMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFLDYED-DIDASAKETADPTSTDNESLAPKDAPETTENKTGASESDPQTSPVETSKEVTEVNVG--QDTSKPEDVNEVKVGEETSKLEDTGELKVDQETDESFALNALKEAFEVVGYPPTSEGQLSFAEVGNPAMALAAFLARLVGPDVAIASAHNSLKSISASSPGTELAARHCFLLEDPPSDNKEQAGPDSVVAEVLKDKVQEDIVDEDKSQKEDNATS----GLEDKDLSNDKGDNILEKPSPEEKSQSAEEQDGIVSHEEVEADNLNKSDNLELPKDQSPTTVGKLDDSKLEAENPPSSEKESGEGISVGKPSEPTDTPKDVDMCDSLPSTKDKPQQPVTSNSVEEPPRSTEASKDLDVSNSLASQMNEPQQPVTAKSE-EPPRPTEESKDVDMVSDPQPQEQDDSQQPVASNSMVETGAS 823 HSP 2 Score: 198.364 bits (503), Expect = 3.316e-48 Identity = 127/186 (68.28%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +GKS+ HD+ E + + IDKLK AAV+ +SAAAVKAKLLA+QEEDQIRQL LIEKQLHK+EAKL FF+EME VVMRV+EQLDRSRQ+LYHER QIIAARLGLP SSSR MP ANR+A N ANSV RPP++M + RPP+SRPMG PT SN + +AGSSIRP SQD LSSVG+K Sbjct: 825 DQTNDGKSEKHDTIETKVDQKIDKLKHAAVSTISAAAVKAKLLAEQEEDQIRQLAAMLIEKQLHKLEAKLGFFSEMENVVMRVREQLDRSRQKLYHERAQIIAARLGLPGSSSRPMPSSMPANRMAMNVANSVPRPPLNMTSLRPPMSRPMGPTAPT-SNQFSPTALAGSSIRPPSQDKLSSVGSK 1009
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9HRP3_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0009s11780g PE=4 SV=1) HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0 Identity = 427/826 (51.69%), Postives = 532/826 (64.41%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERI-----LVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXX-XXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLS------HHGDENTEVSLREENATSPSPNDLTTDKKESTNFA----TNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEK AG+ P+SAE P +RRR G KRKANSLS SS PSKR TREK++ + GP TRARQ + K+ + LV+E +++ +E L+ +IEAEFE +RSRDSNAH+VP+HCGWFSW K H +EE +LPSFFNGKS RTPD YLEIRN IMKKF++NP+ IE KDL ++EV DLDARQEVLEFLDYWGLINFHP DSA + D D AKKDS LE LF FE I+ PS+VPK NL+ P+ S PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQKQAD+DLC DCFNN KFGS MSSSDFILMEP EA+G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+ N+++ SK T A DET+ K+V +T+ESKT EDQ T PME SKPED EV GS+E +E + ++V E K ED + K E EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMALA F A LVGPN+A AS++SSLKSLS P +QLAAR+CF+LEDPP+E K+P+ S VA + + AQ K E + S L H D+ S+ EE + + +K + N A ++EE + ESS KDH PS+ + S+ I S PS+ +ET +A+E SQ + K+VDM SD +KNEP + AS V E S+ DAS++++ S S K+ + G+ ++P +++ DV + Sbjct: 1 MEEK--PAGSYADSPASAE--PGPSRRRPGGHKRKANSLSNFFSSPLPSKRLTREKAAISNLSNHN---GPFTRARQIPNILASSALSAGVKVEQKVATAVPDAAALVEEERRSK-----------VEELQTEIEAEFEVIRSRDSNAHIVPSHCGWFSWTKIHPLEERLLPSFFNGKSQSRTPDTYLEIRNWIMKKFNSNPNTLIEVKDLSELEVSDLDARQEVLEFLDYWGLINFHPLQ-FDSA---PNADGDEAAKKDSSLEKLFCFEAIQPCPSIVPKPNLAAPTTSSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKQADYDLCADCFNNGKFGSNMSSSDFILMEPAEAAGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDV-TNDMNGTSKVTVDADATVDETSGPKDVLDTSESKTGASEDQPLTPPMEASKPEDTSEVKGSQESTENEKSSEVINGPEISKSEDASGVKVSEEMGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMALASFLARLVGPNVATASARSSLKSLSSNYPGMQLAARHCFLLEDPPEERKKPSGSDCVATEMADHDAQKDKQEEKNQKENSPTSGLGDRDLSDDHRDKKVGDSVPEEKKPLDTSKGDSPEKVNAVNEAETAVSHEEVEPCRSKESSNSELPKDHTPSIVKESDGIPPKSACPPSSFKETLEVSSAEEHSQLTEVAKDVDMVSDLKSSEKNEPSQSVASMSVDEHSQAGDASKDVDMVSDSLPADKDGSQQPAKSNAGDHSQPTESTADVDM 803 HSP 2 Score: 206.838 bits (525), Expect = 5.796e-51 Identity = 127/187 (67.91%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 2962 EEG----KSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 EEG K + DS +D++ IDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIA+RLGLP SSRA+PP ANR+A NFAN+ RPPMSM A RPP+SRPMG++ PTP + T AG+SIRP Q+ LSSVGTK Sbjct: 825 EEGPKDSKKEKLDSEVIKDDNKIDKIKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLEMKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIASRLGLPP-SSRAVPPSLPANRIAMNFANAFPRPPMSMTAQRPPISRPMGALAPTPDTLVSTTTTAGNSIRPSGQEKLSSVGTK 1010
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9H0P7_POPTR (DNA-binding family protein OS=Populus trichocarpa GN=POPTR_0004s16070g PE=4 SV=1) HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0 Identity = 419/826 (50.73%), Postives = 523/826 (63.32%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGP---SSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETA-GPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTN----FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQ-LKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEK PAG S A EPAT+RRRAG KRKA+ + SS + KR TREK+ GPLTRARQ + K+E++ V +V + +E L+A+IEAEFE +RSRDSNAHVVP+HCGWFSW + H +EE +LPSFFNGKS RTPD YL+IRN IMKKFHANP++ IE KDL ++EV D +ARQEVLEFLDYWGLINFHP +V +ADGD G AKKD LE LF FE I++ P VV K N + P+ PS PESA+ ++L +LEGPSV+YHCNSCSADCSRKRYHCQK+AD+DLC DCFNNRKFGS MSSSDFILMEP EA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED FF+C N++D SKETA A + D + + EDQ T PME SKPED V + G DV +ET K ED++ K G E EN AL A+ EAFEAVGY+ T E++LSF++VGNPVMA+A F A LVGP++A AS+ S+LKSLS P +QLA+R+CF+LEDPPDE K+P+CS VA + ++ A K E +S KG D K + D+ E S+ EE S DK + N T+EE + ESS KDH PSV + S+ I S PS+ +E +A+E SQ + K+VDM +++ +KN + AS V E S+ D S++++ S S P+ + Q+ VK GE ++ +A+ DV + Sbjct: 1 MEEK-------PAGSFADSPASFEPATSRRRAGGHKRKASLSNSLSSPLSS-KRLTREKAGFSNLSIHN---GPLTRARQIPYILASSAPSAGV----KIEQK--VVAAVPDAAAVVEEERRSRVEELQAEIEAEFEVIRSRDSNAHVVPSHCGWFSWTQIHSLEERLLPSFFNGKSQSRTPDTYLDIRNWIMKKFHANPNILIELKDLSELEVSDSEARQEVLEFLDYWGLINFHPL--QLDSVTNADGD--GAAKKDLSLEKLFRFEAIQTCPPVVTKPNFTAPTTPSRLFPESAIAEELAKLEGPSVEYHCNSCSADCSRKRYHCQKEADYDLCADCFNNRKFGSNMSSSDFILMEPAEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDAFFDC-ANDMDGTSKETADADATIEDTSAPKDVHDTSESKTGADEDQHLTVPMEASKPEDTSGV-------KVCQGGDVINGQETSKSEDVSGVKAGEEIGENVALRALTEAFEAVGYSPTPENRLSFSEVGNPVMAVASFLARLVGPDVATASACSALKSLSSNSPGMQLASRHCFLLEDPPDERKKPSCSDCVATEMADQDALKDKQ-EGKSQKGNSPTSGIDNKDLSDDYSDKKVEDSIPEEKKPLDSSKGEFPDKVDVVNGGEMVVTHEEVEPGRSKESSNSELPKDHTPSVVKESDEIPPKSGCPPSSGKEPLEVTSAEEHSQLTEVAKDVDMVSNLKPPEKNGHSQSFASMSVDEPSQAVDVSKDVDMVSDSLPADNNGSQQPVKSNATGEQSQTTEATADVDM 796 HSP 2 Score: 196.823 bits (499), Expect = 9.153e-48 Identity = 123/189 (65.08%), Postives = 152/189 (80.42%), Query Frame = 1 Query: 2950 ADKI-EEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTV-AGSSIRPGSQDNLSSVGTK 3510 AD++ ++ K + DS +D+++IDKLKRAAV+ALSAAAVKAKLLA+QEEDQIR+L SLIEKQLHK+E KL+FFNEM+ V+MRV+EQLDRSRQRLY ER QIIAARLGLP SSRAMP +NR+A NFAN+ RPPM+M RPP+S PMG++ TP +VS T AG+SIRP SQ+ +SS+GTK Sbjct: 818 ADEVPKDSKKEKPDSEVIKDDNNIDKLKRAAVSALSAAAVKAKLLANQEEDQIRELAASLIEKQLHKLETKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIAARLGLPP-SSRAMPQSLPSNRIAMNFANTFPRPPMNMATQRPPISTPMGTLANTPPGTFVSTTTAAGNSIRPSSQEKISSIGTK 1005
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A067K099_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18808 PE=4 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 443/916 (48.36%), Postives = 557/916 (60.81%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQ----------------------------------------------KQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAG-PAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMAL--------------------------AGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQK--SSLS-HHGDENTEVSLREENATSPSPNDLTTDKKESTN---FATNEEDKKANLNESSIINQSKDHQPSVTRVSNTI--TSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKT-VKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 MEEK + + S A EPA++RRRAG KRKAN+ S +SSSSTPSKR TREK++ GPLTRARQG + + + G KLE+++ + S +A + L + +LE L+A IEAEFE +RSRDSNAHVVPNHCGWFSW K H +EE LPSFFNGKS RTPD Y++IRN I+KKFHANP+VQIE KDL ++EV DLDA+QEVLEFLDYWGLINFHPFP DS SA+ D AKKDSLLE LFHFE I+ P V+ K NLSTPS+PSG PES++ +DL++ EGP+V+YHCNSCSADCSRKRYHCQ KQAD+DLC DCF+NRKFGS MSSSDFILMEP + GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMP ED FF+CDD ++D +SKET P ++D + + + E +ED PME SK ED E+ +E ++ + +ET K +D + K EN A+ A+ EAF+A+GY T E +LSFA+VGNPVMAL A F A LVG +++ ASS SLKSLS P +QLAAR+CF+LEDPPD ++ A +T N+ AQN + E ++ KG+ LS + + E S EE SP+D +T+ + N A + E + L ESS K+ Q +V + SN + S+ PS+ +ET G T PSQP + K+V+M S+S + +EPC + AS PV E S+ A+ S++++ S S KNEQ+ VK +ST +A DV + S SE EPPQPV NSV ENG T Sbjct: 1 MEEKPAGSSATAGADSPASAEPASSRRRAGGLKRKANATSVNSSSSTPSKRLTREKAAISHPPIHNG--GPLTRARQGPNNLGSSASAAAAGAGFKLEDKVALSAS-EAATVAALEEEISKLEKLKASIEAEFEGIRSRDSNAHVVPNHCGWFSWSKIHLLEERALPSFFNGKSQTRTPDTYMKIRNWIVKKFHANPNVQIELKDLSELEVADLDAKQEVLEFLDYWGLINFHPFPQIDS---SANAYSDEAAKKDSLLEKLFHFETIQPSPLVLHKPNLSTPSVPSGLFPESSIAEDLVQPEGPAVEYHCNSCSADCSRKRYHCQKQVGCFLEFVSYCYRRKRYLAVPNHHLDRRRFIFTIIFVLSDYPLGKQADYDLCADCFSNRKFGSDMSSSDFILMEPADP-GLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPTEDAFFDCDD-DVDGSSKETTDQPTIVDDASVPKDGIEISEEKTGAKEDFPLALPMEASKQEDASELKVVQETAKLGNANEAIVGEETTKSKDTSEVKAAQHLGENLAVKALTEAFQAIGYLHTPEIQLSFAEVGNPVMALGSNKIVFLEDTLDQAHIPAKFILSNEAAFLARLVGSDVSTASSGCSLKSLSSDSPGMQLAARHCFLLEDPPDNQQEPAEPDCATETANQDAQNF-NQEGQAQKGNNADGGELSIDNSNRKIEDSAAEEKQPLNSPSDKSTENVNTANEAGTAVSHEVEHGKLKESSDSVLQKEPQINVLKESNEMPSNSECPPSSTKETEGTSTTV-PSQPKEVNKDVEMVSNSTPAENDEPCPSVASVPVEEESQTAETSKDVDMISDSLPAEKNEQQQPVKSNSVRDSTPSIEAPKDVDM-LSSMTSELKEPPQPVAPNSVVENGAT 905 HSP 2 Score: 220.32 bits (560), Expect = 5.779e-55 Identity = 131/189 (69.31%), Postives = 155/189 (82.01%), Query Frame = 1 Query: 2950 ADKIEEGKSKNHDSTE--REDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 A K E+ K +S + + D++SIDK+KRAAV+ALSAAAVKAKLLA+QEEDQIRQL SLIEKQL K+E KL+FFNEM+ V+MRV+EQLDRS+Q+LYHER QIIAARLGLPASSSR MPP NR+A NFANS+ RPPMSM + RPP++RPMG++ PTPSN +VS T AGSSIRP QD LSSVG K Sbjct: 904 ATKAEDQKGSKRESADFKQNDDNSIDKVKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLRKLETKLAFFNEMDHVIMRVREQLDRSKQKLYHERAQIIAARLGLPASSSRGMPPQLPTNRIAMNFANSIPRPPMSMTSQRPPIARPMGTLAPTPSNTFVS-TTAGSSIRPSGQDKLSSVGMK 1091
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: W9R169_9ROSA (SWI/SNF complex subunit SWI3D OS=Morus notabilis GN=L484_026920 PE=4 SV=1) HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0 Identity = 420/827 (50.79%), Postives = 528/827 (63.85%), Query Frame = 2 Query: 116 MEEKRRDAGNS-PAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEER------------ILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAM-NDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRS---VANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITS--QVLPSTLEETGGK-GTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKRRDAG S A S EP ++RRRAG QKRK+ +L S SSS PSKRATREKSS GPLTRARQ S + +L G A +L E+V A + E + ELEALE+ +EA+F+A+RSR ++AHVVP+HCGWFSW K H +EE LPSFFNGKS +RT D YLEIRN IMKKFH+NPS QIE KDL ++EVGDLDARQEVLEFLD+WGLINFHPFPP SAV ADGD DG AKK SL + L+HFE+ +S V+PK N++ P++PSG PESA+ ++L+R V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KF SGMSS+DFILMEPGE +GLSGGKWTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHF+QMPIED F + DD N+D+ SKE A PA+ D++ T E+Q+ T PMETSK ED K+V S++ S+ +VK +E K ++ + K G E E+C + A++EAFEAVGY LT E SFA+VGNP MALA F A LVGP++A AS+ +SLKSLSG P+I+LA R+CF+LEDPP D KEP S VAN ED SL ++K+ LS E+ E P+ KE +EE NL + S KD PS S + + ++ PS ++E+ GK G E ++ + +V+MS+ +KNEP + + + A+ +N++ S S KN++ I + + P++A+ DV + Sbjct: 1 MEEKRRDAGTSTSASGDSPATEPTSSRRRAGGQKRKSGNLGSSGSSSAPSKRATREKSSLSHPPIHN---GPLTRARQAPSSLSSSLASADGAPAASASGGAKPAAEQARVPGVLGGETVAAASVAEELRKESELEALESGLEAKFQAIRSRSNSAHVVPSHCGWFSWTKIHPIEERTLPSFFNGKSELRTADTYLEIRNWIMKKFHSNPSTQIELKDLSELEVGDLDARQEVLEFLDHWGLINFHPFPPTSSAVGGADGDGDGTAKKGSLADKLYHFEIPQSSMPVIPKNNVAAPAVPSGLFPESAIAEELVR-----VEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSTDFILMEPGEGAGLSGGKWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFVQMPIEDTFLDYDD-NMDSTSKENADPASTEKDQSVPKDAGEATKGETAASENQSPTSPMETSK-EDIKDVKASQDTSKPVEANEVKASQENSKRKEGSESKVGEETEEDCTIKALKEAFEAVGYPLTCEGSFSFAEVGNPAMALAAFLARLVGPDLATASAHNSLKSLSGNSPSIELAVRHCFLLEDPPNDNKEPAGLLSVDKVANGETQTDEIPCDKKEDSSL--EEKTCLSAPEGESQE-----------KPH----AAKEQEAVVASEEGDSVNLKKRSTSKIIKDQPPSTLGGSGELKAEGELPPSLVKESEGKSGQLPESTE---TLNDVEMSEPPPSEKNEPQQNVSLNFRSDSTHSAEDLKNVDAVSDSLPLEKNDKHGK--IVNSDGKPPSNAARDVDM 795 HSP 2 Score: 204.527 bits (519), Expect = 3.087e-50 Identity = 123/182 (67.58%), Postives = 146/182 (80.22%), Query Frame = 1 Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +G + HD+ E +++ IDK+KRAA +A+SAAAVKAKLLA+QEEDQIR+L+ LIEKQL KME KL+FFNEME VVMRV+EQ+DRSRQRLYHER QIIAARLGLPASSSR MP NR+ N A SV RPP+SM + RPP+SRPMGS+ P+PS P T+AGSSI+P QD LSSVGTK Sbjct: 828 DGDKEKHDALETKEHK-IDKIKRAAASAISAAAVKAKLLANQEEDQIRRLSALLIEKQLQKMETKLAFFNEMENVVMRVREQMDRSRQRLYHERAQIIAARLGLPASSSRVMPSSLPGNRIGVNIAGSVTRPPLSMVSQRPPMSRPMGSVAPSPSIPL--PTLAGSSIQPPCQDKLSSVGTK 1006
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: B9RBE0_RICCO (Transcription regulatory protein SWI3, putative OS=Ricinus communis GN=RCOM_1674900 PE=4 SV=1) HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0 Identity = 416/844 (49.29%), Postives = 539/844 (63.86%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAG---PSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNF----ATNEEDKKANLNESSIINQSKDHQPSVTRVSNTIT--SQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLK-KNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQLXXXXXXXXXXXXXXXXTSNSVNENGVT 2614 ME+K ++ AG P+SAE +++RRRA QKRKAN+LS S++SSTPSKR TREK++ GPLTRARQ + G K+EE++ + +A + L + +LE L+ IEAEFE +RSRDSNAHVVP+HCGWFSW K H +EE LPSFFNGKS +RTPD+Y+EIRN I+K+FH NP+VQIE KDL +++V D+DA+QEVLEFLDYWGLINFHPFP DS A+ D G ++K+ LLE LFHFE I+ V+ + N+S+P++PSGF P+S++ D+L+R EGP+V+YHCNSCSADCSRKRYHCQ QAD+DLC DCFNN KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIEDVFF+C D ++D NSKET P A DET+ K+ ETTE KT AK TS ED EV +E + G++ V+ET K +D++ K EN AL A+ EAFE VGY T E++LSFA+VGNPVMALA F LVG ++A AS+QSSLKSL+ P +QLAAR+CF+LEDPPD D+K ++ E EE S N+ + K + N+ A++ E + L E + K+ Q S+ + +N I+ S+ PS+++ET T SQ + K+VDM ++L NEPC + AS + E S+ A+ SE+++ S S P + +Q+ VK G+ + P +A DV+++S + QPV S+ ENG T Sbjct: 1 MEDKPAGGSSATAGGDSPASAE-PTSSSRRRASGQKRKANALSTSNASSTPSKRLTREKAAISQIPVHNG--GPLTRARQSPNNLGSTAAGGGI----KVEEKVAAVTATEAATIAALEEEVSKLEELKGGIEAEFEVIRSRDSNAHVVPHHCGWFSWPKIHPLEERALPSFFNGKSKIRTPDIYMEIRNWIVKRFHLNPNVQIELKDLSELDVADVDAKQEVLEFLDYWGLINFHPFPQTDSP---ANADGGGRSEKELLLEKLFHFETIQPCLPVISRPNVSSPALPSGFFPDSSIADELVRPEGPAVEYHCNSCSADCSRKRYHCQTQADYDLCADCFNNGKFGSDMSSSDFILMEPAEAPGISGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDVFFDCCD-DVDGNSKETTDPPANMDETSAPKDGMETTEDKTG----AKQDQTLTSSTEDANEVKVCQEIARPDNGSEAIIVEETSKSKDISEVKADQHMGENFALKALTEAFEGVGYPSTPENRLSFAEVGNPVMALAVFLGRLVGRDVAIASAQSSLKSLNSESPGMQLAARHCFLLEDPPD--------------------------------DKKGPAGIGCNKKIEAFAPEEKQPPDSSNEESNKKLNTVNYAGIAASHAEVEPGKLKEFNESESEKEPQMSILKETNEISSKSETPPSSVKETEQSLTTVH-SQLTEISKDVDMVSDLKLSDSNEPCQSIASVLIEEPSQAAEVSEDVDMVSHSLPQENIEQQQKVKTNSAGDHSHPTEAPKDVKMLSSLPSEAKEPQQQPVAPISLVENGET 796 HSP 2 Score: 221.861 bits (564), Expect = 8.839e-56 Identity = 126/182 (69.23%), Postives = 152/182 (83.52%), Query Frame = 1 Query: 2965 EGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +GK + DS E +D+ +IDK+K AA++ALSAAAVKAKLLA+QEEDQIRQL SLIEKQLHK+E KLSFFNEM+ ++MRV+EQLD+SRQRLYHER QIIA RLG+P SSSRAMPP NR+A N ANS+ RPP++M + RPP+SRPMG++ P PSNP+VS T AG+SIRP QDNLSSV TK Sbjct: 803 DGKKEKPDSNEIKDDHNIDKIKSAAISALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHKLETKLSFFNEMDHIIMRVREQLDKSRQRLYHERAQIIATRLGIPPSSSRAMPPTLPTNRIAMNIANSIPRPPVNMNSQRPPISRPMGALAPIPSNPFVS-TTAGNSIRPSGQDNLSSVVTK 983
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A059ANS0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01261 PE=4 SV=1) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 371/705 (52.62%), Postives = 467/705 (66.24%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAE---LEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXX-XXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLN----------ESSIINQSKD 2188 MEE+RRDAG PAG ++AE + A+TRRRAG KRKA++L S SS PSKR TR+KSS +H N GPLTRARQG S + A G K EE+ +E ++AE+ ++ E LEA +RSR+++AHVVPNHCGWFSW K H +EE L SFFNGKS RT ++YLEIRN IMKKF ANP IE KDL D+EVGD++ARQEVLEFLDYWGLINFHPF DS D D G+AK+D ++E L+ FE + + P+ N + P MPSG ESA+ +DL++ EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCTDCFN+ KFGSGMSSSDFILMEP E G++GG WTDQETLLLLEALELYKENW+EIAEHVATKTKAQCILHFLQMPI+D F +CDD ++D SKE ND+ ++++ T EDQ +T PM+ SK ED E E+ S + K ++ K ED V ++ EN AL A+REAFEA+GY T ES +SF +VGNPVMALAGF + LVG ++AAAS++SSLKS+SG P +QL R+CF+LEDPPD +E S+S+ +TG+ +N D+ K D S++ +E+ + + EN+ PS D+ KE +T ++ K +NLN ES I+ +S D Sbjct: 1 MEERRRDAGTLPAGAAAAEPQSADSASTRRRAGGHKRKASALGASGPSSAPSKRVTRDKSSISHAHQIHN--GPLTRARQGPASASSAAPAGGLAAV-KSEEKKAAQEVLEAEEARRASERWEALEAAIEADFEA---IRSRNADAHVVPNHCGWFSWTKVHPLEERALASFFNGKSQSRTHNMYLEIRNKIMKKFRANPKSLIELKDLEDLEVGDVEARQEVLEFLDYWGLINFHPFLQSDSP--KTDADVIGVAKEDPMIEKLYRFEATQPCLPIAPRNNQAAPPMPSGLFSESAIFEDLVKPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNSGKFGSGMSSSDFILMEPAELHGVTGGNWTDQETLLLLEALELYKENWSEIAEHVATKTKAQCILHFLQMPIQDAFLDCDD-DVDATSKENTDLTTTNDDAPISRDTPERTEGKTDPVEDQPQTSPMDISKAEDTHEGKVDEKTSSQEEANKSKVAQDIPKLEDAEVKVKDIK--ENLALKALREAFEALGYFSTPESSVSFGEVGNPVMALAGFLSRLVGSDVAAASARSSLKSVSGNSPGLQLVMRHCFILEDPPDHEELAGSQSLVKETGDVIPEN---GTDKEQKEDIIPSIT--SEEDLNIGEKCENSDHPSAGDIVEAAKELD--STVQQLKHSNLNVGSSDLLKNSESGIMKESND 687 HSP 2 Score: 155.221 bits (391), Expect = 9.250e-35 Identity = 101/169 (59.76%), Postives = 123/169 (72.78%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAG 3459 D++++GK + + + D S+DKLKRAA +ALSAAAVKAKLLAD E DQIR L L EKQLHK+E KL+F+NE+E V MRV+EQL+R+RQRLYHER QIIAARLG SSSR P ANR+ N AN R P SM + RPPL RP G++ P PSNP+VS + AG Sbjct: 814 DQLKDGKGDHERAATKYD--SMDKLKRAAASALSAAAVKAKLLADHELDQIRHLALLLAEKQLHKVEMKLAFYNEVENVTMRVREQLERARQRLYHERAQIIAARLGYSGSSSRPNPATLPANRIPMNMANLAPRAPTSMPSQRPPLLRPPGNVAPNPSNPFVSTSTAG 980
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A072UM37_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKR P+ + EP +RRRAG KRK+ SL+ S+S+ST SKR TREK+S L N GPLTRARQ + +G A + + + ++ E +K ++ E + +E +A +RSRD+NAHVVP HCGWFSW H +E+ ++PSFFNG S RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP DSAV S GD DG A+K+SLLE L+HFE ++S P V K L TP+M SG PE A+ ++L++ EGP+V+ YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D SKETA PAA N+ + ++ ++ + K ETS+ ED K EE + + G+D K + T K ED N K G E ++C L A++EAF AVGY+ E SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG P+ ++A+R CFVLEDPPD+K+ T S+S + T Q+ D+ L+ D QK+ ++ E+ + S P + + E+ N N E N N+ SI D Q ++ S + T +P + EE + + +EP P + KE +SDS +KNE + S EL +PA+ ++ + S S PS + QK + ES + D++ DV + Sbjct: 1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804 HSP 2 Score: 181.415 bits (459), Expect = 6.345e-43 Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER II++RLG+PASSSR +PP NR+ NFANS+ RP +M P +SRP + T NP +S T AGSS+RP SQ+NLSSVGT+ Sbjct: 898 NQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1039
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: G7JG42_MEDTR (SWI/SNF complex subunit SWI3D OS=Medicago truncatula GN=MTR_4g069830 PE=4 SV=1) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 386/828 (46.62%), Postives = 510/828 (61.59%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQ----------XXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPM-ETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTC-----SRSVANDTGNRGAQNVKHSEDESLKGD-QKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDH-QPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS-PSRSKNEQKTVKPIPDGESTEPADASDDVQL 2533 MEEKR P+ + EP +RRRAG KRK+ SL+ S+S+ST SKR TREK+S L N GPLTRARQ + +G A + + + ++ E +K ++ E + +E +A +RSRD+NAHVVP HCGWFSW H +E+ ++PSFFNG S RTPD Y+EIRN IMKKFH+NP++QIE KDL ++++GD DARQE++EFLDYWGLINFHPFP DSAV S GD DG A+K+SLLE L+HFE ++S P V K L TP+M SG PE A+ ++L++ EGP+V+ YHCNSCS DCSRKRYHCQKQADFDLCTDCFNNRKFG+GMS DFILMEP EA+G+S GKWTDQETLLLLEALELYKENW EIAEHV TK+KAQCILHF+QMPIED F +CDD ++D SKETA PAA N+ + ++ ++ + K ETS+ ED K EE + + G+D K + T K ED N K G E ++C L A++EAF AVGY+ E SFA+VGNPVMALA F A LVG ++A AS+ + +KSLSG P+ ++A+R CFVLEDPPD+K+ T S+S + T Q+ D+ L+ D QK+ ++ E+ + S P + + E+ N N E N N+ SI D Q ++ S + T +P + EE + + +EP P + KE +SDS +KNE + S EL +PA+ ++ + S S PS + QK + ES + D++ DV + Sbjct: 1 MEEKR-----PPSTVDTPAPEPTPSRRRAGGNKRKSGSLNASNSASTSSKRITREKASPLHHPPPHN--GPLTRARQIPNNSSAAANSSTAGGSASAPAAVKHAPQTQALVVAAEQLKKKESEWESMEAEIEAEFKA--------IRSRDANAHVVPTHCGWFSWSDIHSIEKRMMPSFFNGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDSDARQEIMEFLDYWGLINFHPFPSTDSAVAST-GD-DGEAEKNSLLEKLYHFETLQSCPPAVQKTGLITPAMTSGLFPEPAIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCTDCFNNRKFGTGMSPLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWTEIAEHVGTKSKAQCILHFVQMPIEDAFVDCDD-DVDAGSKETADPAATNNNLPMDEDKAKDASEVIENDISDSIKGHDETSQAEDVKVKDNQEETPKLQDGSDEKTSEGTPKLEDDNKVKLGEEVGDDCVLNALKEAFAAVGYSPEPEGPSSFAEVGNPVMALAAFLAQLVGSDLAVASAHNYIKSLSGNAPSTEIASRCCFVLEDPPDDKKDTATSERDSKSEGDQTDKNVQQDAAMLNDKDLEKDHQKTKIASDASEDKIHQASTDGGISEKP---ISSEGEAMN---NHESGLDNCNDPSISKAPNDQAQGTLHNSSGSTTKAEIPPSSEEVQERTSNEEPGHPIEEQKEGSVSDSHPSEKNEIQQSIKSNLPVELPKPAETPKSDDMVSDSMPSDTNKPQKQLSTNAVSESQKTTDSAMDVDV 804 HSP 2 Score: 181.8 bits (460), Expect = 6.111e-43 Identity = 111/194 (57.22%), Postives = 143/194 (73.71%), Query Frame = 1 Query: 2929 GCILLFFADKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 G I D G +D ++ + +SS +K+KRAAV+ L+AAAVKAK+LA+QEEDQIR+LT++LIEKQLHK+E KL+FFN+ME +VMRVKE LDRSR +LYHER II++RLG+PASSSR +PP NR+ NFANS+ RP +M P +SRP + T NP +S T AGSS+RP SQ+NLSSVGT+ Sbjct: 848 GAIAGAVEDCAGNGMEVKNDGSKTKQDSSFEKVKRAAVSTLAAAAVKAKVLANQEEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRLGVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQGPLISRPGSTAATTLPNPLMSATAAGSSVRPSSQENLSSVGTE 1041
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V4SCB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027804mg PE=4 SV=1) HSP 1 Score: 541.576 bits (1394), Expect = 1.374e-168 Identity = 337/619 (54.44%), Postives = 434/619 (70.11%), Query Frame = 2 Query: 662 LEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD------CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPP-DEKEPTCSRSVANDTGNRGAQNVKHSEDESLKG-------DQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKES----TNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCSPSRSKN 2458 +EIRN IMKKFH+NP QIE KDL ++EVG LDARQEV+EFLDYWGLINFHPFP +S+V ++DGD D AKK SLLE L+ FE I++ P V P +++ P++PSG PESA+ ++L +LEGP+V+YHCNSCSADCSRKRYHCQKQADFDLCTDCFNN KFGS MSSSDFILM PGEA+G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED+F +CDD ++D N KET A N +T+ +K+V+E +ESKT + Q +T PMETSKPED E+ E+ S+ K +DVK ++ LK ED + K G E EN AL A+REAFEAVGY T E+ SFA+VGNPVMALA F A L GP++ AS++SSLKS+SG P +QLAA++CF+LEDPP D+KE S S+ + +R Q + ED ++K D++ + HGD+ E S+ EE + S N+ ++K N T E+D+ +LNE S KD+QPS+ SN + S+VL S+ +E+ G+G++ EP+ P K+ +SDS+ KNEP S V E S P+ +++++ S P S+N Sbjct: 1 MEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSVANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIAEELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMVPGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFLDCDD-DVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASELKICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHETPQSFAEVGNPVMALAAFLALLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPGDKKEVARSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPEEKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLPSKVLQSSQKES-GEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQPFISNSVAEPSPPSKLTKDVDMVS-DPQPSEN 616 HSP 2 Score: 202.601 bits (514), Expect = 4.449e-50 Identity = 128/186 (68.82%), Postives = 144/186 (77.42%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +G+ + HDS E +++ IDKLK AAVTALSAAAVKAKLLA QEEDQIRQL TSLIEKQL K+EAKL+FFNEM+ V MRV+EQL+RSRQRLY ER II ARLG SR M P ANR FANSVARPPMSM +PRPP+SRPM + TPSNP+ S T AGSSIRP SQDNLSSVG K Sbjct: 670 DQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQIRQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLG----PSRVMQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPSSQDNLSSVGMK 851 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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