g.barbadense_cottongen_reftransV1_0092725, g.barbadense_cottongen_reftransV1_0092725 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SSR1_SCHPO (SWI/SNF and RSC complexes subunit ssr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.482e-19 Identity = 82/305 (26.89%), Postives = 131/305 (42.95%), Query Frame = 2 Query: 551 VPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPF---------PPGDSAV-VSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEG------PSVD-------------YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLS-GGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIED-VFFNCD 1372 VP WF + K H +E+ P FF+GK+ +TP+VY E R+ ++ F N V + GD+ A V FL+ WGLIN++ PP S + AD + ++ + + + + N+ PS LDD+L+ +G PS+ HC C + Y Q +++C C+ +F S + +D+ E + + WT QE +LL E +E+Y ++W ++A HV TK+ +CIL FL +P D F D Sbjct: 54 VPEWAQWFDFSKVHEIEKKQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAGDVCAVLRVHRFLEQWGLINYNVNPDTRPSKIGPPSTSHFQILADTPRGLVPLLPPPSSSIPRSKAVTIEDPSIVRTNIYDPS-----------LDDVLKGKGSTPNQKPSLSNLHENNIDQSDSPQHCYCCGNKFNESYYQSQTAQKYNVCISCYQQNRFPSPTTIADY--KEVAIQNKIEDDDTWTAQELVLLSEGVEMYSDDWAKVASHVNTKSVEECILKFLNLPSSDKALFKMD 345
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: SWI3_YEAST (SWI/SNF complex subunit SWI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWI3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.114e-17 Identity = 80/310 (25.81%), Postives = 133/310 (42.90%), Query Frame = 2 Query: 548 VVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANP----SVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGD---CDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCT-----------------DCFNNRKFGSGMSSSDFILMEPGEASG-LSGGK--------WTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDN 1378 V+P++ WF+ +K H +E LP FF + P +TP+VY+ RN ++ + NP SV +++ GD A + +FL WGLIN+ DS ++ + + + + LF FE + PS LP+ A L ++ N+ ++ + +Y + + +D T NN S + D L+E GE S L K W+ ++ LL+ ++ + +W ++A++V K+ QCIL FLQ+PIED F D N Sbjct: 306 VIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV----SGDAAALFRLHKFLTKWGLINYQ----VDSKLLPKNIEPPLTSQYSTRHDAPRGLFPFESYK----------------PSVQLPDMAKLKKMM-----------NTSDSESTLYKYLKESKRKYDEITHPPSTTDDENGDKNDNGGKMNNEVSTSTSMTGDANLLEEGETSRPLKKVKILEQIDENWSKEDLQKLLKGIQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFLYGDGN 580
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR4_ARATH (Dirigent protein 4 OS=Arabidopsis thaliana GN=DIR4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.681e-16 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = -1 Query: 4397 SRNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4555 SRN ITE ERE+AVVGG+G+FRMA+G AQL TY VN GDAIVEYNVT+ HY Sbjct: 134 SRNTITEKEREVAVVGGRGRFRMARGVAQLNTYYVNLTNGDAIVEYNVTLYHY 186
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR15_ARATH (Dirigent protein 15 OS=Arabidopsis thaliana GN=DIR15 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.557e-12 Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 4397 SRNPITE--SERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4555 SRNP+ E ERE+A+VGG+GKFRMA+G+ ++KT ++ KTGDA++ Y+ TV HY Sbjct: 136 SRNPVAEEVGEREIAIVGGRGKFRMARGFVKVKTNKIDMKTGDAVLRYDATVYHY 190
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR19_ARATH (Dirigent protein 19 OS=Arabidopsis thaliana GN=DIR19 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.101e-9 Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + + RE+ V+GG G FR A+GY Q T+ N KTG+AIVEYN ++HY Sbjct: 134 RNSVFDKVREMPVIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: MYBX_DICDI (Myb-like protein X OS=Dictyostelium discoideum GN=mybX PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 2.754e-9 Identity = 45/145 (31.03%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 971 PSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQAD-------------FDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVA-TKTKAQCILHFLQMPIEDVFF 1363 P + D L++ + P + C C ADCS RY + +C +CF++ + + + SS F +E + WTD ETLLLLE +E++++NW EI++++ +KT QC+ HF+++PIED F Sbjct: 840 PKKLTTTKSANDQLIKKKKPL--FECKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMIICVNCFSSGNYENFIQSSSFQRIEQHQPEEFG---WTDIETLLLLEGIEIFRDNWQEISDYIGGSKTPEQCLTHFIRLPIEDEFL 979
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR17_ARATH (Dirigent protein 17 OS=Arabidopsis thaliana GN=DIR17 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 6.639e-9 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = -1 Query: 4400 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIH 4552 RNPI RE+ ++GG G FR +GYAQ KT+T N +G+A+V+YNV + H Sbjct: 221 RNPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYIWH 271
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR21_ARATH (Dirigent protein 21 OS=Arabidopsis thaliana GN=DIR21 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 8.807e-9 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = -1 Query: 4400 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIH 4552 RNP+ RE+ ++GG G FR +GYA KT N +GDA+VEYNV + H Sbjct: 139 RNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR23_ARATH (Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.192e-8 Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = -1 Query: 4400 SRNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIH 4555 + NPI RE+ +VGG G FRMA+GYA +T + KTGDAIV YNVT++H Sbjct: 140 AMNPI----REMPIVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Match: DIR22_ARATH (Dirigent protein 22 OS=Arabidopsis thaliana GN=DIR22 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.435e-8 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = -1 Query: 4397 RNPITESERELAVVGGKGKFRMAKGYAQLKTYTVNFKTGDAIVEYNVTVIHY 4552 RN + RE+ VVGG G FR+A+GY + +T + KTGDA VEYN V+HY Sbjct: 74 RNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNCYVLHY 125
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: K7LT00_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 545.428 bits (1404), Expect = 4.179e-168 Identity = 395/798 (49.50%), Postives = 510/798 (63.91%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPED-EKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPD-EKEPTCSRSVANDTGNRGAQNVKHSEDESLKGDQKSSLSHHGDENTEVSLREENATSPSPNDLTTDKKEST--NFATNEE---DKKANLNESSIINQSKDHQPSVTRVSNTITSQV-LPSTLEETGGKGTAKEP-----------SQPPKAVKEVDM-SDSVQLKKNEPCDAAASKPVGELSEPADASENLETASCS 2440 MEEKRRDA S A S EPAT+RRRAGA KRK +LS S SSS PSKRA R+K+S L + N GPLTRARQ + + + + A + ++ L E K E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW H +E+ +LPSFF+GK+ RT DVY+EIRN IMKKFH+NP+VQIE KD+ + VGD DARQEV+EFLDYWGLINFHPFP DS+V +A D G A+K LLE L+HFE ++ P V + + TP+ SG PES + ++L++ EGP+V+ YHCNSCSADCSRKRYHCQKQADFDLCTDCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCILHF+QMPIED F +CDD ++D KETA P A ++++ K+ SE E+ T+ + K TSK ED E +V E P + + G+D K +ET K ED K EA +CA+ A++EAF AVGY+ E SFADVGNPVMALA F AHLVG + A AS+ SS+KS++ P +LAAR CF+LEDPPD +KEPT S + G++ NV ++D+S D K + H ++ E + E+ S +D ++ S+ N E DK +LN + + N D P S TS+ +PS+ ++ + +EP S P + K+ +M SD++ K++P + ++ P E E D+ +++ S S Sbjct: 1 MEEKRRDAAPSAA--DSPASEPATSRRRAGANKRKFGTLSASGSSSAPSKRAARDKASPLFPPAPHN--GPLTRARQTPNNLSASSSAAASAPAAVKRSERAHPSAAESTALAEQLKKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWSCIHPIEKQMLPSFFSGKTENRTSDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDSDARQEVMEFLDYWGLINFHPFPSMDSSVATASDD--GEAEKSLLLEKLYHFETLQLCPPVQRSSQM-TPATTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCILHFVQMPIEDTFVDCDD-DVDAGCKETADPVATKSDSSMDKDASECIENHTSDGIKDSEK---TSKAEDLEVKVNQKETP-KLQEGSDEKASEETSKSEDAVKVKIDQEADNDCAINALKEAFAAVGYSPGPEGPSSFADVGNPVMALATFLAHLVGSDAAVASAHSSIKSMTRNSPGTELAARCCFLLEDPPDSKKEPTSSERDSKSEGDQDEVNV--NQDKSTLED-KDLPTDHNNKKIESNALEDKGKPASADDGASEIPISSKEQAVVNNECGLDKCHDLNNAKLPN---DQAPGTLHNSGGSTSKAEIPSSSDKAQEETLIEEPCPSVKDRHVSDSLPSETSKDAEMVSDAIPSTKSKPQNPESTNPAHESLETTDSVMDVDGVSNS 780 HSP 2 Score: 180.259 bits (456), Expect = 1.731e-42 Identity = 109/186 (58.60%), Postives = 140/186 (75.27%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D + G D T+ + +SS +K+KRAAV+ L+AAAVKAKLLA+QEEDQIRQLT+ LIEKQLHK+E KL+FFN++E VVMR +E ++RSR +LYHER IIA+RLG+P SSSR +PP NR+ TN ANS+ RP M M PRP +SRP G++ T NP +T AG+S+RP +Q+ LSSVGTK Sbjct: 832 DNADNGAKVEDDGTKTKQDSSFEKVKRAAVSTLAAAAVKAKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGIPPSSSRGVPPSIPTNRIPTNIANSLPRPQMMMNPPRPLISRPAGTVA-TIQNPLTPSTAAGNSVRPSNQEKLSSVGTK 1016
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: V7AF01_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G046200g PE=4 SV=1) HSP 1 Score: 542.347 bits (1396), Expect = 1.111e-166 Identity = 352/624 (56.41%), Postives = 432/624 (69.23%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSSAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIE-SRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVD---YHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK-EPTCSRSVANDTGNRGAQNVK 1972 MEEKRRDA S A S EPA++RRRAG KRK+ +L+ S SSS PSKRA R+K+S L N GPLTRARQ S + G+ A + + L E + E E LEA IEAEFEA+RSR +NAHVVP HCGWFSW H +E+ +LPSFFNGK RTPDVY+EIRN IMKKFH+NP+VQIE KD+ + VGD++ARQEV+EFLDYWGLINFHPFP DSAVV+A D DG A+K SLLE L+HFE ++ RP V +++ TP+ SG PES + ++L++ EGP+V+ YHCNSCSADCSRKRYHCQKQADFDLC+DCF+NR+FGSGMSS DFILMEP E +G++GGKWTDQETLLLLEALELYKENWNEIAEHV TKTKAQCI +F+QMPIED F +D N+D KE P A N++++V K+ SE E+ T+ +D+ TSK ED + E+ + + G+D K + T K ED K EA CA+ A++EAF AVGY+ E SFA+VGNPVMALA F AHLVG ++A AS+ SS+KS+S P LAAR CF+LEDPPD K EPT S + G++ NVK Sbjct: 1 MEEKRRDAAPSAA--DSPASEPASSRRRAGGNKRKSAALNASGSSSAPSKRAARDKASPLHPPPLHN--GPLTRARQTPNSVAASSSAGASTPAAVKHSERTHLSAADSAALAEQLRKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKIENRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDMEARQEVMEFLDYWGLINFHPFPSMDSAVVTAMED-DGDAEKSSLLEKLYHFETLQLCRP--VQRSSQMTPATASGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCISYFVQMPIEDTFAEFED-NVDAGCKEPTDPVATNNDSSVGKDASECIENDTSDQDK-------TSKAEDVEVKASQEDNLKLQEGSDEKASEGTSKSEDAVKGKSDQEAGNECAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGTDVAVASAHSSIKSMSRNSPGTDLAARCCFLLEDPPDNKNEPTSSERDSKSEGDQNEVNVK 609 HSP 2 Score: 176.022 bits (445), Expect = 3.766e-41 Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 +QEEDQIRQLT+ LIEKQL K+E KL+FFN++E VV+R +E ++RSR +LYHER IIA+RLG+PASSSR +P + NR+ TN ANS+ RP M M RP +SRP G++ T NP S+T AG+S+RP +Q+ LSSVGTK Sbjct: 890 NQEEDQIRQLTSLLIEKQLLKLETKLAFFNDVENVVLRAREHVERSRHKLYHERALIIASRLGIPASSSRGVPATVSTNRIPTNIANSLPRPQMMMSPQRPLISRPAGTVATTLQNPLASSTAAGNSVRPSNQEKLSSVGTK 1031
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A0A0K5Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G267920 PE=4 SV=1) HSP 1 Score: 536.569 bits (1381), Expect = 1.271e-166 Identity = 355/755 (47.02%), Postives = 480/755 (63.58%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPS-SAELEPATTRRRAGAQKRKANXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXX----XXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEKEPTCS-RSVANDTG--NRGAQNVKHSEDESLKGDQKSSLSHHGDEN-TEVSLREENATSPSPNDLTTDKKESTNFATNEEDKKANLNESSIINQSKDHQPSVTRVSNTITSQVLPSTLEETGGKGTAKEPSQPPKAVKEVDMSDSVQLKKNE 2353 ME+KRRD N P+ + S EP ++RRRAGA KRKA++L S++ S PSKR TR+KS+ + GP TRAR G + A G G+ + L+ V+ D A +EA +EA++SR +N HVVPNHCGWFSW K H +EE L +FF+GK+ R+PD+Y+EIRN IMKKFHANPS QIESKDL ++EVG+LDARQEV+EFL++WGLINFHPFP DS + D + +KDSL+E LFHFE +ES PSVVPK N +T + P L ES + ++++R EGPSV+YHCNSCSADCSRKRYHCQK+ADFDLC++CFNN KF S MSSSDFILME G SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F + N++ KET P + ++++V +++E+ ++K T ++ + + + + E +VG E DV+G +K E + D + +E+ AL A+REAFEA+GY LT E LSFADVGNPVMALA F A LVG ++A+AS++ SLKS S P+++LA R+CF+LEDPPD+K+ + SV N N Q+ K SED S +LS + N + S+ +E + + +D + TN ++ L E ++ KD + + + S + S++ + +E +G T ++P + + +V MSD +++E Sbjct: 1 MEDKRRDTANIPSNTTDSPSSEPPSSRRRAGAHKRKASALGASNTLSAPSKRVTRDKSALSHPPNHN---GPFTRARLGPNNVAGAASAGGLAPGSVKADGSLLHSEVQRGDALLSAAEELNKATRLANLEASFEVDYEAIKSRGANVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKAANRSPDIYIEIRNWIMKKFHANPSTQIESKDLSELEVGELDARQEVMEFLEHWGLINFHPFPATDSI---STNDVNDENQKDSLVEKLFHFETLESCPSVVPKINATT-AAPPRLLRESTISEEIVRPEGPSVEYHCNSCSADCSRKRYHCQKRADFDLCSECFNNGKFDSDMSSSDFILMESAGVPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLES-EGNVEVGGKETIAPPLIENDSSVPSDITESVDNKATGKEASSVENASSKEDTGEVKVGQDNPKLE-----DVEGKASLVKSESKD---DDEKVSEDIALNALREAFEAIGYVLTPEHSLSFADVGNPVMALAAFLARLVGSDVASASARFSLKSTSQKSPSLELATRHCFILEDPPDDKKAQDNLESVDNVEAQKNDKEQSAKQSEDNSTSILDDRALSTNNSNNKSGESVTKETTENGNSSDAIREHDPITNHGSDTSSNLKELGEKELL---KDEKTGIVKESENLESKLTSNPVETSGEGTTGEKPLESTMSSNDVHMSDLQHAERSE 736
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: F6HQL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g02410 PE=4 SV=1) HSP 1 Score: 537.339 bits (1383), Expect = 6.142e-165 Identity = 336/683 (49.19%), Postives = 442/683 (64.71%), Query Frame = 2 Query: 521 VRSRDSNAHVVPNH-----------CGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSAVVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNIDTNSKETAGPAAMNDETTVAXXXXXXXXXXXXXXD-QAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDE-KEPTCSRSVANDTGNRGA---QNVK-----------------HSEDESLKGDQKSSLSHHGDENTEVSLREENATSP-SPNDLTTDKKES---------------------TNFATNEED-KKANLNESSIINQS------KDHQPSVTRVSNTITSQ--VLPSTLEETGGKGTAKEPSQPPKAVKEVD-MSDSVQLKKNEPCDAAAS 2374 +RSRD+N HVVP+ GWFSW K H +E +PSFFNGKS R PD+Y +IR+ I+K+FH NP+ QIE KDL ++E+GDLDARQEV+EFLDYWGLINFHPF P +S+V A+GD D + DS +E L+ F++++S P VVPKAN+S P+M SG PESA +++L+R EGPSV+YHCNSCSADCSRKRYHCQKQADFDLCT+CFNN+KFGS MSSSDFILMEP EA G+SGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHF+QMPIED F +C+D + N +E A P + N++++V K++ E+TESKT + + METSKPE + E S+ ++ + ET KPE N KD E E CAL A+REAFEAVG T + L+F D GNPVMALA F LVG A+A+ SSLKS+S P +QLAAR+C++LEDPPD+ KE S S + ++ A +N+K EDE+ K + + L+ + +V+ REE++ S +D D+ E+ + A E D +N +E I++QS KD P+ S+ +T + +LPS+++E+G + K+ SQP +A K+VD + +S+ L+ EP + S Sbjct: 149 IRSRDANVHVVPSSSGEIHLFTTLSTGWFSWTKVHPLEAQAMPSFFNGKSENRNPDMYKQIRDWIIKRFHGNPNTQIEVKDLSELEIGDLDARQEVMEFLDYWGLINFHPFLPAESSV--ANGDDDTAKQLDSSVEKLYRFDMVQSCPPVVPKANMSAPTMASGLFPESAFVEELVRSEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCTECFNNQKFGSDMSSSDFILMEPAEAPGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDTFIDCED-ETNVNPQENADPVSANNDSSVPKDIPESTESKTDVSEGHPPSSAMETSKPEG-PPLSSPMETSKPESQPPPSPM-ETSKPEGGNEMKDNQETGEACALKALREAFEAVGSLPTPGAPLTFTDAGNPVMALAVFLTQLVGSGRASAAVHSSLKSMSSNSPGMQLAARHCYILEDPPDDKKEQVGSESATAEMVDQDAHKDENMKDVNEKDEKQKDVNQKDASQEDENQKHENQKELNQKEENQKDVNQREEHSISILEGSDTLKDQNENKIEDSVPEEKLSVPPNGECTEKSLAAKEPDVVVSNDSEPGILSQSSNSDLPKDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASVKDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTS 826 HSP 2 Score: 200.29 bits (508), Expect = 7.763e-49 Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 1 Query: 2953 DKIEEGKSKNHDSTEREDNSSIDKXXXXXXXXXXXXXXXXXXXXDQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANRVATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 D+ +EGKS++HDS++ + + SIDK+KRAA +ALSAAAVKAKLLA+QEEDQI+Q T LIEKQLHK+E KL+FFNEME V+ RV+EQ+DRSRQRLYHER QIIAARLG SSSR P NR +F SV RPPM M + RPP+SRPM M P+ N VS+TVAGSSIRP SQD LSSVGTK Sbjct: 839 DQTKEGKSESHDSSKTKPDPSIDKIKRAATSALSAAAVKAKLLANQEEDQIQQFATLLIEKQLHKLETKLAFFNEMESVITRVREQMDRSRQRLYHERAQIIAARLGFAGSSSRPTAPSLPINRPGMSFPTSVPRPPMGMTSQRPPMSRPM-MMAPSSLNTLVSSTVAGSSIRPPSQDKLSSVGTK 1023
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Match: A0A022RC06_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000855mg PE=4 SV=1) HSP 1 Score: 535.028 bits (1377), Expect = 7.594e-165 Identity = 367/765 (47.97%), Postives = 466/765 (60.92%), Query Frame = 2 Query: 116 MEEKRRDAGNSPAGPSS-AEL---EPATTRRRAGAQKRKA-------NXXXXXXXXXXXXKRATREKXXXXXXXXXXXXXGPLTRARQXXXXXXXXXXXXXXXXXXKLEERILVKESVKAEDXXXXXXXXXXXXXXXXXXXXXXXXVRSRDSNAHVVPNHCGWFSWKKAHHVEECILPSFFNGKSPVRTPDVYLEIRNSIMKKFHANPSVQIESKDLPDIEVGDLDARQEVLEFLDYWGLINFHPFPPGDSA--VVSADGDCDGIAKKDSLLENLFHFEVIESRPSVVPKANLSTPSMPSGFLPESAVLDDLLRLEGPSVDYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNRKFGSGMSSSDFILMEPGEASGLSGGKWTDQXXXXXXXXXXXYKENWNEIAEHVATKTKAQCILHFLQMPIEDVFFNCDDNNID---------TNSKETAGPAAMND-ETTVAXXXXXXXXXXXXXXDQAKTKPMETSKPEDEKEVGGSEEPSETKTGTDVKGVKETLKPEDMNVPKDGLEATENCALTAIREAFEAVGYNLTSESKLSFADVGNPVMALAGFFAHLVGPNIXXXXXXXXXXXXXGTCPNIQLAARNCFVLEDPPDEK----EPTCSRSVANDTGNRGAQNVKHSE--DES---------LKGDQ----KSSLSHHGDENTEVSLREEN-ATSPSPN--DLTTDKKESTNFATNEEDKKANLNESSIINQS---KDHQPSVTRVSNTITSQVLPSTLEETGG 2266 ME+KRRD + PSS AE EP T+RRR G QKRK+ S+S T SKR REK + + GPLTRAR + N + + A++ E + KAE +++ SE EALEAKIEAE++A+ SRD+NAHVVP H GWFSW K H +EE +LPSFFNGKS RTP++Y EIRN IMK+FH NP+ QIE K L ++ VGD+D RQEV+EFLDYWGLIN+HPFP + A +V AD + D I K DSL+E LF FE +ES +VP+ + P+M SG LPES + D+L++ EGPSV+YHCNSCS DCSRKRYHCQKQADFDLC DCFNN KFGS MS SDFILMEP EA G+SGG WTDQETLLLLEA+E++K+NW+EIAEHVATKTKAQCILHF+QMPIED FFN D N D ++S E + P A +D +T + T ++Q + PME SKP++ KE+ G GLE ++ AL A+ EAFEAVGY + E LSFA GNPVMALA F LV PNIA AS +S LKSLS C + QLAAR+CF LEDPP++ +P + +V N+ KH+E D++ L+ D+ K SL DE T+ + +++ TSPS + D + KE TNEE + + E S N KD + S+ S+T ++ P T++E+ G Sbjct: 1 MEDKRRDLAGIQSQPSSMAETPPSEPPTSRRRGGGQKRKSASINNSGGGGGSSTSQMTSSKRQAREKLPPVPFPPIHMN-GPLTRARVQPYNTNSLSEVSAVKSEAEIGEA-----AAKAE----MSRVSENWEALEAKIEAEYDAIVSRDANAHVVPIHAGWFSWTKIHPLEERMLPSFFNGKSESRTPEIYTEIRNWIMKRFHHNPNEQIELKHLNELTVGDMDVRQEVMEFLDYWGLINYHPFPRNEPAAMLVDADSNKDEIVKMDSLVEKLFQFESVESWTPIVPRMTTAIPAMSSGLLPESVIADELVKSEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCADCFNNGKFGSDMSPSDFILMEPAEAGGVSGGNWTDQETLLLLEAIEIFKDNWSEIAEHVATKTKAQCILHFVQMPIEDAFFNHGDENNDAPKENVVPVSDSTEISAPKADDDNDTPLKDVPDITENQGGATDNQDSSCPMEISKPDEVKELDG------------------------------GLEDGKSFALKALNEAFEAVGYLPSPEESLSFAKAGNPVMALAAFLVRLVEPNIANASVRSLLKSLSSNCSSEQLAARHCFPLEDPPEDMKDVVDPEGAATVTNEHEEVQKDKTKHAEKLDKTPDSVADGINLRDDENDRSKDSLIEENDEKTDTTSKDQKPVTSPSGDCADRSDTLKEPNGMVTNEETQPVSKTEPSSSNLEQVPKDGEESLVAASHT---ELQPDTVKESEG 722 HSP 2 Score: 147.902 bits (372), Expect = 1.332e-32 Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 1 Query: 3085 DQEEDQIRQLTTSLIEKQLHKMEAKLSFFNEMEGVVMRVKEQLDRSRQRLYHERTQIIAARLGLPASSSRAMPPPNAANR-----VATNFANSVARPPMSMKAPRPPLSRPMGSMTPTPSNPYVSNTVAGSSIRPGSQDNLSSVGTK 3510 DQEEDQI QL+TSL+EKQL+K+EAKL+FFN+ME VVMRVKEQLDRS+QRL+HER IIA R G+ +SS+R PNA N N N +RP M M + RPP+SRPM + P P N ++ + GSS++P + D LSSV K Sbjct: 820 DQEEDQILQLSTSLVEKQLYKLEAKLAFFNDMENVVMRVKEQLDRSKQRLFHERAHIIATRFGM-SSSNR----PNAQNLPPNRPPINNVPNMASRPFMGMNSLRPPISRPMMTANPAP-NSFMPGSATGSSVQPNA-DKLSSVSMK 959 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 24
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BLAST of g.barbadense_cottongen_reftransV1_0092725 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092725 ID=g.barbadense_cottongen_reftransV1_0092725; Name=g.barbadense_cottongen_reftransV1_0092725; organism=Gossypium barbadense; type=contig; length=4555bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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