g.barbadense_cottongen_reftransV1_0092691, g.barbadense_cottongen_reftransV1_0092691 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092691
Unique Nameg.barbadense_cottongen_reftransV1_0092691
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2718
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At11chromosomeg.barbadense_cottongen_reftransV1_0092691:1..2718 .
At11:63997310..64000435 -
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.132e-41
Identity = 105/307 (34.20%), Postives = 171/307 (55.70%), Query Frame = -2
Query:  642 SLTRYKFEDLKAATGNFSE--SNRIKGSVFRGSFQ-GDAAAMKVMNG-------DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDN----VREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLD 1520
            +  ++ ++++  AT +F+        G+V++  F  G  AA+K MN        D   EI LL K++H N++ L GFC+++   +LVY+Y   GS+ D LH+         SW  R++IA DVA+AL YLH Y +PP  H+++KSSNILLD NF AK+++FGLA +  D       +   + GT GY+ PEY+    +T K DV++ GV++LEL++G  A +  +N    L+  S R +L        V  ++K+ I+ + G +  LD   ++  + ++C   +  +RPS+  VL    ++L  S D
Sbjct:  313 AFRKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQDFCREIGLLAKLHHRNLVALKGFCINKKERFLVYDYMKNGSLKDHLHAIGKPPP---SWGTRMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDGSVCFEPVNTDIRGTPGYVDPEYVVTQELTEKSDVYSYGVVLLELITGRRAVDEGRN----LVEMSQRFLLAKSKHLELVDPRIKDSINDAGGKQ--LD---AVVTVVRLCTEKEGRSRPSIKQVL----RLLCESCD 603          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.060e-41
Identity = 101/300 (33.67%), Postives = 154/300 (51.33%), Query Frame = -2
Query:  645 YKFEDLKAATGNFSESNRIK----GSVFRGSF-QGDAAAMKVM-----NGD--VSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSL 1508
            + +E+L  AT  FS+ N +     G V++G    G   A+K +      GD    +E+  L +I+H +++ + G C+      L+Y+Y     +   LH  K      L W  RV+IA   A  L YLH   +P  IH+++KSSNILL+ NF A+V++FGLAR   D +     +T  V+GT GYMAPEY  +G +T K DVF+ GV++LEL++G    +  +  G+E L    R ++      E+  +  DP LG  Y     F M + A  CV H  + RP M  ++     + +  L
Sbjct:  365 FSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLKIGGGQGDREFKAEVETLSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDLYFHLHGEKS----VLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCN---THITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRHLATKRPRMGQIVRAFESLAAEDL 657          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.352e-41
Identity = 105/287 (36.59%), Postives = 159/287 (55.40%), Query Frame = -2
Query:  669 LKAATGNFSE--SNRIKGSVFRGSFQ-GDAAAMKV-------MNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLH-SNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGE-ELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTL 1493
            L+ AT NFS+       GSV+ G  + G   A+K+       +N    +E+ LL +I+H N++ L G+C       LVYEY   GS+ D LH S+ ++    L W  R+QIA D A  L YLH   NP  IH+++KSSNILLD+N RAKV++FGL+R  E   E    ++    GT GY+ PEY  +  +T K DV++ GV++ ELLSG+   +AE  G E  ++  +  ++ +GD     +   IDP +     ++  + +A++A  CV      RP M +V+V +
Sbjct:  601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKP---LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTE---EDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGD-----VCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAI 876          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: PTI11_ARATH (PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana GN=PTI11 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.800e-41
Identity = 104/299 (34.78%), Postives = 159/299 (53.18%), Query Frame = -2
Query:  657 FEDLKAATGNFSESNRIK----GSVFRGSF-QGDAAAMKVMN--------GDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNK----FQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKIL 1502
             +++K  T NF     I     G V+  +   G A A+K ++         +  S+++++ ++ H N+I+L GFCV      L YE+A  GS+ D+LH  K     Q   TL W  RV+IA + A  L YLH    PP IH++++SSN+LL  +++AK+ +F L+    DN    L  TR V+GT GY APEY   G +T K DV++ GV++LELL+G    +     G++ L       L  D    K+K  IDP L  +YP      +A +A +CV ++   RP+M+ V+  L  +L
Sbjct:   58 LDEVKEKTENFGSKALIGEGSYGRVYYATLNDGVAVALKKLDVAPEAETDTEFLSQVSMVSRLKHENLIQLLGFCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWITRVKIAVEAARGLEYLHEKSQPPVIHRDIRSSNVLLFEDYKAKIADFNLSNQAPDN-AARLHSTR-VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSED----KVKQCIDPKLKADYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLL 350          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.800e-41
Identity = 101/310 (32.58%), Postives = 166/310 (53.55%), Query Frame = -2
Query:  627 YKFEDLKAATGNFSESNRIK----GSVFRGSFQ--GDAAAMKVM--NG-----DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLH---SNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSS 1508
            + F++L  ATGNF     +     G VF+G+ +      A+K +  NG     +   E+  L   +H N+++L GFC       LVYEY  +GS+ D LH   S K      L W  R++IA   A  L YLH+ + PP I+++LK SNILL  +++ K+++FGLA+     D+    ++  V+GT GY AP+Y   G +T K D+++ GV++LEL++G  A +  K   ++ L    R + +    R      +DP L  +YP+   +    ++ +CV    + RP ++DV++ L+ + SS   +DP+S
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKK----PLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDK--THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKD---RRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSK--YDPNS 389          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: F6I6X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00240 PE=4 SV=1)

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 339/590 (57.46%), Postives = 438/590 (74.24%), Query Frame = -2
Query:  600 AYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADE-KSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGG--LQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEFERSTSLT 2360
            AYLL++  + I+++N +S DV+ I   ++++VPVNCSCSG     +YQ+NASYT+K+D+E YF+++N+TYQGLTTCQA+KA NP  YRNL VG  L+VP+ CACPT NQ  AG  YLL+Y+VTWGD ISS A+TFG D+ +S+ +AN LS  D+IFPFTP+LVPL   P+ I+   S PPP S         G +D  SSKKWV++GVG+G   L+LL  +G + C  RR+ Q+ + +P+  A          KP    +    N+ S+S+SS G+ HA+ESLT YK+E+L+ A G F E+NRIKG V+RG  +GD AA+K+M GDVS EIN+LK INH+N+IRLSGFCVH+GNTYLVYEYA+ GS+SD LH +  +   TL WKQRVQIA DVA+ALNYLHN+ NPP IHKNLKSSNILLD N R KV NFGLAR +E+ + GG  LQLTRHVVGT+GYMAPEY+ENG+ITP+LD FA GV+ILELL+G++AA ++   G   L  S+  VL+GD+VR KL+ FIDP L  +YP DLAF+MAQLAK C+AHDL+ARP+M D+L+ LSKILSSSLDWD   +F+ +  L+
Sbjct:   17 AYLLNSNPSDIATINQIS-DVNKIPKDTVLIVPVNCSCSG----HFYQYNASYTLKYDFENYFTLANNTYQGLTTCQALKAHNPYYYRNLSVGMDLLVPLMCACPTANQTAAGFNYLLTYLVTWGDYISSIADTFGVDDIQSIFDANSLSS-DLIFPFTPILVPLKNPPTRIQTTLSPPPPKSPVVPNG---GGAD--SSKKWVYVGVGIGATLLVLLMPSGIILCLLRRRLQSRQDKPVPGAGGGTK-----KP----SYSMENNISLSVSSGGIHHAVESLTVYKYEELQKAAGFFGEANRIKGCVYRGLIKGDDAAIKMMKGDVSEEINILKLINHSNVIRLSGFCVHKGNTYLVYEYAENGSLSDWLHGDG-RIGSTLGWKQRVQIACDVANALNYLHNFTNPPCIHKNLKSSNILLDGNMRGKVANFGLARRLENEEGGGGRLQLTRHVVGTQGYMAPEYMENGLITPELDAFAFGVVILELLTGKEAAPSQNKEGRG-LCVSVNEVLEGDDVRHKLRGFIDPCLTHDYPFDLAFTMAQLAKSCIAHDLNARPTMFDILIILSKILSSSLDWDSFDDFQSTGFLS 584          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: A0A078HLH8_BRANA (BnaA04g19600D protein OS=Brassica napus GN=BnaA04g19600D PE=4 SV=1)

HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0
Identity = 354/647 (54.71%), Postives = 462/647 (71.41%), Query Frame = -2
Query:  621 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFD-YETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVG-ESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDS-TTYTPNSWSVSIS-----SQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSS-EINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAAN-AEKNGGEE-LLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEF 2528
            T+AQQ YVNN QLACE+   DN I+ GF+CNG  RSC+SY+TF S PP YNT  SIA LL+A A +I +LNNL++  + I  + +VV+P  CSCSG     +YQHNA+Y +  +  ETYFSI+NDTYQ L+TCQAM +QNP   RNL  G  L+VP+RCACPT NQ  AG +YLL+Y+V  GDS+S+ AE F +   +V   NEL+ D+I F FTP+LVPL  EP+ I     SP P       + PV  +  S SS KW++IGVG+G G LLL+ +    FC+++R  +        TAS              S  T + N WS+++S     + G++ AIESLT Y+F DL++AT NFSE N+IKGSV++ +  GD AA+KV+ GDVSS EI+LLKK+NH+NIIRLSGFC+ EG +YLVYEY++ GSVSD LHS+  + S T  W+QRV+I  D+A+AL+YLHNY+ PP+IHKNL+S+N+LLD NF+AK++NFG+AR +++ D   LQLTRHV GT+GY+APEY+ENGVITPKLDVFA GV++LELLSG++A    +K   EE LL   I  VL G+NVREKLK F+D SLG EYPL+LAF+MAQLAK CVA D+++RPS+A VL TL  I+SSS+DW+PS + 
Sbjct:   27 TKAQQPYVNNHQLACENRDFDN-ITNGFTCNGP-RSCRSYLTFWSLPP-YNTPNSIATLLNASAAEIQTLNNLTSLTTVIPTRRLVVIPTTCSCSG--GGGFYQHNATYRLSGERQETYFSIANDTYQALSTCQAMMSQNPYGERNLTAGLNLLVPLRCACPTANQTAAGFRYLLTYLVAQGDSVSAIAEMFRSSTPAVSSGNELTSDNIYF-FTPLLVPLRTEPTRIVITPPSPTPPVATPPQSPPVDPQGGSSSSHKWIYIGVGIGAGLLLLISILSLYFCYYKRSSK--------TASLIEQNKLTDSSTKRSLPTTSTNQWSIALSNSSDTTSGLKSAIESLTLYRFSDLQSATSNFSEENKIKGSVYKATINGDDAAVKVIKGDVSSSEISLLKKLNHSNIIRLSGFCIREGASYLVYEYSENGSVSDWLHSSNKKKSLT--WRQRVEICRDIAEALDYLHNYVTPPHIHKNLESNNVLLDSNFKAKISNFGVARILDEGDLD-LQLTRHVEGTQGYLAPEYVENGVITPKLDVFAFGVVVLELLSGKEAVTTVDKEEKEEMLLCREINNVLGGENVREKLKEFMDSSLGDEYPLELAFTMAQLAKSCVAPDINSRPSIAQVLTTLLMIVSSSIDWEPSHDL 656          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: V4LN18_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10016366mg PE=4 SV=1)

HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0
Identity = 347/643 (53.97%), Postives = 461/643 (71.70%), Query Frame = -2
Query:  621 QAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQ----GVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSS-EINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGE---ELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEF 2525
            +AQQ YVNN QL CE+   DN I+ G +CNG   SC+SY+TF S PP YNTA SIA LL+  A +I S+NNL+   ++ITP+ +V++P NCSCSG     +YQHNA+Y +   +ETYFS++NDTYQ L+TCQAM +QN    +NL  G+ L+VP+RCACPT NQ  AG  YLL+Y+V+ GDS+S+ A+ F +   +VL+ NEL   D+I+ FTP+ VPL  EP+ I    S PPP + P           S SS KWVF+G+G+G G LLL+ L    F F++R+ +  + +   +++   +            T TP  WS+ +S      G++ AIESLT Y+F DL++AT NFSE N+IKGSV+R +  GD AA+KV+ GDVSS EI+LLKK+NH+NIIRLSGFC+ EG +YLVYEY++ GS+ D LHS+  +   TL+WKQRV+IA D+A+AL+YLHNY+ PP+IHKNL+S+NILLD NFRAK++NFG+AR I D+ +  LQLTRHV GT+GY+APEY+ENGVITPKLDVFA GV++LELLSG++    +K  GE   E+L   I+ VL G+NVREKLK F+DPSL  EYPL+LA++MAQLAK CVA DL++RPS+A VL  L  I+SSS+DW+PS + 
Sbjct:   22 EAQQPYVNNRQLDCENRAFDN-ITNGNTCNGPT-SCRSYLTFWSHPP-YNTANSIAGLLNVSAAEIQSINNLTTVTATITPRQLVIIPANCSCSGA---GFYQHNATYRIS-RHETYFSVANDTYQALSTCQAMISQNSYGEKNLVPGSDLLVPLRCACPTVNQTAAGFNYLLTYLVSQGDSVSTIADMFRSTTDAVLDGNELKSSDLIYFFTPLSVPLRTEPTRIVTSPSPPPPVATPPQSPPVE-PPGSSSSHKWVFVGIGIGAGLLLLISLFALFFFFYKRRSKPEQNKLTDSSTKHSVL-----------TTTPPQWSIDLSKSSDTFGLKSAIESLTIYRFHDLQSATSNFSEENKIKGSVYRATINGDDAAVKVIKGDVSSSEISLLKKLNHSNIIRLSGFCIREGTSYLVYEYSENGSIGDWLHSSDKKR--TLTWKQRVEIARDIAEALDYLHNYVTPPHIHKNLESTNILLDSNFRAKISNFGVAR-ILDDGDLDLQLTRHVEGTQGYLAPEYVENGVITPKLDVFAFGVVVLELLSGKEVVTIQKEKGEEEVEMLCKEIKNVLGGENVREKLKAFMDPSLENEYPLELAYTMAQLAKSCVAPDLNSRPSIAQVLTKLLMIVSSSMDWEPSHDL 642          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: G7J6Q7_MEDTR (LysM type receptor kinase OS=Medicago truncatula GN=MTR_3g080170 PE=4 SV=2)

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 331/643 (51.48%), Postives = 444/643 (69.05%), Query Frame = -2
Query:  612 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGES-DSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGS-VFRGSFQGDAAAMKVMNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDND--EGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEFERS 2528
            T++QQ Y++N QL C+DP+K    + G  CN    SCQSY+TF+S PP YNT  +IAYLL++    I++ NN+S  V  I   +M+ VPVNC CSG     YYQHN+SYT+K + E YF+++N+TY+ LTTCQA+ AQN     NL  G  + VP+RCACPT  QI  G KY+L+Y+V+ G+     AE FG D +SVL+AN+L ED +IF FTP++VPL ++P         PP   + +     +  + DS SSKKWV +G+ VG   LLL+              Q HK +   +++         +  S++ T   N  S S+ S+G+R+A ESLT Y+FE+L  AT  FSE+NRI+GS  +R S +GD AA+KV+ GDVS EIN+L++INH NI R+SG  VH+G+TYLVYE+A+ GS+ D +H +K   S  L+WKQRVQIA DVADALNYLHNY+NPP+IHKNLKS N+LLD NFR K+ NFGLAR ++D D  E G Q TRHVVGT GYM PEYIENG+++PK+DVFA GV++LELLSG +A   +KNGGE+ LSA +  VL+GDNVREKL  F+DP+L  EYPL++ +SMA++AK CVA+  + RP++++VLV LSKI SSS++ DPS   E++
Sbjct:   23 TKSQQEYLDNHQLDCDDPSKS---TYGNICNS-INSCQSYLTFKSSPPHYNTPATIAYLLNSTVPLIANANNISY-VDPIPTDTMITVPVNCYCSG----HYYQHNSSYTLKTEDENYFTLANNTYESLTTCQALDAQNIYGLTNLTAGLNMHVPLRCACPTSKQIENGFKYILTYLVSEGEYPELIAEIFGVDSQSVLDANKLIEDQVIFYFTPLMVPLKDKPPTKIQRTLPPPSTPLSKPHVENLARNKDSSSSKKWVVVGIAVGAAFLLLIFFVLLFCFC-----QQHKNKKKLSSAATKTTT---EEVSNTNTSITNP-SFSLCSEGLRYAFESLTVYEFEELHKATSFFSEANRIRGSSAYRASLKGDDAAVKVLKGDVSVEINILRRINHANITRISGLSVHKGSTYLVYEFAENGSLDDWIHFSKCINSVALTWKQRVQIAQDVADALNYLHNYVNPPHIHKNLKSDNVLLDGNFRGKLCNFGLARVVDDYDFGEEGFQFTRHVVGTHGYMPPEYIENGLVSPKMDVFAFGVVMLELLSGREAIVGDKNGGEKRLSAVVSEVLEGDNVREKLHAFMDPTLRGEYPLNMGYSMAEIAKRCVANYHNLRPNVSEVLVILSKIQSSSVNRDPSDVMEKT 647          
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: A0A022RMN6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002413mg PE=4 SV=1)

HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0
Identity = 355/674 (52.67%), Postives = 455/674 (67.51%), Query Frame = -2
Query:  624 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMK-----FDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETF---GADEKSVLEANELSEDDIIFPFTPVLVPLS-EEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGS--VFRGSFQGDAAAMKVMNG-DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNK--FQ---------------TSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGED----------AANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSE 2528
            + AQQ YVNN QLAC     +++ + GF CNG   +C SY+TFRS P  YNT +SIAYLL A A+QI++ NN+S DV  +   ++V+VPV CSCS     +YYQHNASY +K      + ETYF++SN TYQ LTTCQ+M++QNP DYR+L  G +L VP+RCACPT NQ  +G  YLL+Y++  GD+ +S A  F   GAD + +L+AN LS +D+IF FTP+LVPL  +          +PPP      P +  G S+S+   KW+FIGVG+G   L LL         +RR+RQ++K       SPPP P        D T+  P     S+SSQ +R AIE+LT YKFEDL  AT +FSESNRI GS  V+ GSF+GD A +K+M G DVS EIN L++INH++IIRLSGFC+H   TYL+YEYA+KGS+++ L  N    Q               T   L WKQR+QIAYDVADALNYLHN+ NPPYIHKNLKSSNILLD N RAK+ +F L+RT+E +D+    +TRHVVGT GYMAPEYIE+G+ITPKLDVFALGV++LELLSG +            N E +    LLS  I  VL G++VREKLK F+DP LG EYPL++A+S+ +LA+ CVAH++ ARP+++DV V LSK+LSSSLDWDPS +
Sbjct:   16 STAQQSYVNNKQLACN---TNDSTTLGFVCNGASSTCTSYLTFRSTPT-YNTPISIAYLLSADASQIAAANNIS-DVEFLPADTLVIVPVKCSCS----QNYYQHNASYILKNQEGTAETETYFTVSNVTYQSLTTCQSMESQNPYDYRHLYPGFRLTVPLRCACPTLNQTSSGFNYLLTYLIRQGDNYNSIAAAFSASGADVQGILDANRLSVNDLIFFFTPILVPLKIQPTKAFNNTLPAPPPPPPSNFPPNHNGGSNSR---KWIFIGVGIGAAVLFLLSSVLLYLLCYRRRRQSNK-------SPPPPPKLRADKSGDPTSAGPPFSDWSVSSQSIRSAIETLTVYKFEDLDKATSSFSESNRINGSSSVYLGSFKGDNAVIKIMKGGDVSREINALRQINHSHIIRLSGFCLHHDITYLIYEYAEKGSLTEWLRPNSSLLQKKLDSNDKHMNIISITERRLDWKQRLQIAYDVADALNYLHNFTNPPYIHKNLKSSNILLDGNLRAKIADFALSRTLEADDQN--VMTRHVVGTYGYMAPEYIESGLITPKLDVFALGVVMLELLSGREPIVDDDDVGKDKNKEGSHQMLLLSERIERVLSGESVREKLKEFVDPWLGDEYPLEVAYSLGELARRCVAHNIDARPNVSDVFVALSKLLSSSLDWDPSHD 668          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
Y1497_ARATH1.132e-4134.20Probable receptor-like protein kinase At1g49730 OS... [more]
PERK9_ARATH2.060e-4133.67Proline-rich receptor-like protein kinase PERK9 OS... [more]
Y1677_ARATH2.352e-4136.59Probable LRR receptor-like serine/threonine-protei... [more]
PTI11_ARATH2.800e-4134.78PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis... [more]
RLCK7_ARATH2.800e-4132.58Probable serine/threonine-protein kinase RLCKVII O... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6I6X9_VITVI0.000e+057.46Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A078HLH8_BRANA0.000e+054.71BnaA04g19600D protein OS=Brassica napus GN=BnaA04g... [more]
V4LN18_EUTSA0.000e+053.97Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
G7J6Q7_MEDTR0.000e+051.48LysM type receptor kinase OS=Medicago truncatula G... [more]
A0A022RMN6_ERYGU0.000e+052.67Uncharacterized protein OS=Erythranthe guttata GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20coord: 376..426
e-value: 6.0E-12
score: 44.9
NoneNo IPR availableGENE3D1.10.510.10coord: 427..641
e-value: 2.0E-44
score: 150.7
NoneNo IPR availablePANTHERPTHR27001FAMILY NOT NAMEDcoord: 353..661
coord: 190..333
NoneNo IPR availablePANTHERPTHR27001:SF183PROTEIN LYK5coord: 353..661
coord: 190..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 308..670
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..307
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..27
score: 0.55
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..27
score: 0.829
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.909
NoneNo IPR availableTMHMMTMhelixcoord: 285..307
IPR018392LysM domainPFAMPF01476LysMcoord: 200..242
e-value: 0.029
score: 14.3
IPR013320Concanavalin A-like lectin/glucanase domainGENE3D2.60.120.200coord: 252..375
e-value: 4.0E-7
score: 29.3
IPR000719Protein kinase domainPFAMPF00069Pkinasecoord: 402..641
e-value: 6.4E-40
score: 137.0
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 366..648
score: 32.358
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 347..641

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092691 ID=g.barbadense_cottongen_reftransV1_0092691; Name=g.barbadense_cottongen_reftransV1_0092691; organism=Gossypium barbadense; type=contig; length=2718bp
ATCAATGATGCAGGAGTGTGACTTCAACCTTGATGGAGAACTTGACCATG
AAGAATTTGTGGAATTCATTCAACGGCTCACGACCGACACATTAATTGTT
GTTAGTCAGGGACTGATTGTCACTTTGGTTGTTGCTCCAACTGTTGCCAT
GACGACAAAGAAGGCTACTGAGGGTGTTCCTGGTGTTGGGAAAGTGGTGC
AGAAGTTACCCAATTCGATTTATGCATCCCTTGTGACCCTTGCCATTGTT
TTGTTTCAGACTTCGCGTGAAGAGGTTTAGTTGAGCACTCTATTTTCTGT
CGAATTACCGTCTCCGTATATGAGATTATATCTCAGTTTGTATAGTATGT
CTTTCGAGTTGGCTTAACTATCCGAAGACCAACATTTCTGGAATTTGTGG
TAACGTATATAATGAAAATGTAAATGAAGTTGTGGGAAACTTAAGTTATT
CCATTGCAAAACAATATTTCTCATACAAATATACTTGTTTTGAAAACTCC
ATTTTAGTACTATTGCAGGAAAAATGTCACAATATTTCCTTATTCTTTTT
GGTACTTGGGCCCTTTCACCAATGTAATAGCATCTCACTACCTGGCACTG
GTTAGAGATGTGGAACGTTCAAACTCACTAGAAGGATCCCAATCCAATGA
AGATGATAGAATCTTAGACAAGGTGACCAAAACGTCAGCCATGGAAGGAC
GAGCACTGAGATCATGAGCAACACAGATTTTAGCCAGTTGAGCCATGGAA
AAAGCCAAATCCAGGGGATATTCAGGCCCAAGAGAAGGATCGATGAAGTT
CTTGAGCTTCTCTCTCACATTATCCCCTTGAAGCACCACTCTGATAGATG
CAGATAACAGCTCTTCTCCACCATTCTTTTCAGCATTTGCAGCATCTTCC
CCTGATAAAAGCTCCAATATAATAACCCCCAATGCGAAAACATCGAGCTT
AGGCGTGATCACACCATTTTCAATGTACTCAGGAGCCATATAACCTTTAG
TCCCAACCACATGTCTTGTCAACTGCAATCCACCTTCATCGTTGTCCTCA
ATAGTTCTTGCCAACCCGAAGTTGGTGACTTTGGCTCTAAAGTTAACATC
CAAGAGAATGTTACTGCTCTTCAAATTCTTATGAATATAAGGAGGATTTA
TATAGTTATGCAAATAGTTGAGTGCATCAGCTACATCGTATGCAATCTGA
ACTCTTTGCTTCCAAGAAAGAGTAAATGAAGTTTGGAACTTGTTGGAGTG
AAGCAAATCACTGACTGAGCCTTTATCTGCGTACTCATAGACAAGGTATG
TGTTTCCTTCATGTACACAAAAACCTGAAAGCCTTATAATGTTGGTGTGA
TTGATCTTCTTCAATAAATTGATCTCTGAAGAAACATCCCCGTTCATTAC
TTTCATAGCAGCAGCATCACCTTGGAAAGAACCTCGAAAAACTGACCCTT
TAATCCTGTTGGATTCACTGAAGTTCCCTGTAGCAGCTTTCAAGTCCTCG
AACTTGTAACGAGTTAAGGATTCGATTGCATGACGAACCCCTTGGGAAGA
TATTGAAACAGACCAGGAGTTTGGAGTGTAAGTTGTTGAATCCGAGAAAG
GTTTCAGATTGAATGGTGGCATTGGTGGTGGTGAAGCAGTAGCTATTGGC
CTGGCCTTGTGAGCTTGGCGTTGACGTCTGAAGAAACAGAACAAGAACCC
TGCTAGGCCAAGAAGGAGAAGGGAACCGATTCCAACACCAACACCAATGA
AAACCCATTTCTTAGAAGACTTGGAATCTGATTCTCCAACTGGGGAAGTT
GGTATTTGAGGGACTGAGGCTGGAGGTGGGGAGCTTTGAGGCGGTTTAAT
CATGGAAGGCTCTTCAGAAAGTGGAACCAAAACAGGTGTAAATGGGAATA
TGATATCATCCTCAGATAACTCATTGGCCTCCAATACACTCTTCTCATCA
GCACCAAAAGTCTCAGCAGTAGAAGAAATGGAATCACCCCAAGTAACAAT
ATAAGAAAGCAAGTATTTAGCACCAGCTCGAATTTGATTATGAGTAGGAC
AAGCACATCTAATAGGAACTACAAGTTTATTACCCACTTCTAGATTCCTA
TAATCAATGGGGTTTTGAGCTTTCATTGCCTGACAAGTTGTAAGACCCTG
ATAAGTATCATTAGAAATGGAAAAATAAGTCTCGTAATCAAACTTCATAG
TGTAAGAAGCATTATGCTGGTAATAGCTGTCATTGACGGTGCCGGAACAG
GAACAGTTGACTGGAACAACCACCATTGACTTGGGGGTAATTGAAGAAAC
ATCAGCTGAAAGGTTGTTTAGAGATGAAATCTGGGTTGCTTGAGCGTCTA
ACAAGTATGCTATGGAGACAGCAGTGTTGTAAAAAGGTGGCTCCGACCGG
AAAGTGATGTAAGACTGACATGATCTTTGCTCACCGTTACATGAAAACCC
TCTGCTTATGTTGTTGTCTTTGGTTGGATCTTCACAGGCAAGCTGCAGAT
TATTTACATACCCTTGTTGCGCTTGAGTGAACCCAAGGAAGAACAGCAAC
AAGAAAGGAAGACAAAATTTTAGACAAGGTTTCAATCTTCCAACTGCCAT
AGGAAGATCAATTTTTTTTAAATGAAAAAGAAAAATCGTTTTGTTTAGAA
ATGGGGATAAGGAAAGGAGTGTTTTTTTAATTGGGAAGAGTTGAGAACGG
GAGACCCCTAATGTATAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR018392LysM_dom
IPR013320ConA-like_dom_sf
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation