g.barbadense_cottongen_reftransV1_0092691, g.barbadense_cottongen_reftransV1_0092691 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.132e-41 Identity = 105/307 (34.20%), Postives = 171/307 (55.70%), Query Frame = -2 Query: 642 SLTRYKFEDLKAATGNFSE--SNRIKGSVFRGSFQ-GDAAAMKVMNG-------DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDN----VREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLD 1520 + ++ ++++ AT +F+ G+V++ F G AA+K MN D EI LL K++H N++ L GFC+++ +LVY+Y GS+ D LH+ SW R++IA DVA+AL YLH Y +PP H+++KSSNILLD NF AK+++FGLA + D + + GT GY+ PEY+ +T K DV++ GV++LEL++G A + +N L+ S R +L V ++K+ I+ + G + LD ++ + ++C + +RPS+ VL ++L S D Sbjct: 313 AFRKFSYKEMTNATNDFNTVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQDFCREIGLLAKLHHRNLVALKGFCINKKERFLVYDYMKNGSLKDHLHAIGKPPP---SWGTRMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDGSVCFEPVNTDIRGTPGYVDPEYVVTQELTEKSDVYSYGVVLLELITGRRAVDEGRN----LVEMSQRFLLAKSKHLELVDPRIKDSINDAGGKQ--LD---AVVTVVRLCTEKEGRSRPSIKQVL----RLLCESCD 603
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: PERK9_ARATH (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana GN=PERK9 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.060e-41 Identity = 101/300 (33.67%), Postives = 154/300 (51.33%), Query Frame = -2 Query: 645 YKFEDLKAATGNFSESNRIK----GSVFRGSF-QGDAAAMKVM-----NGD--VSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSL 1508 + +E+L AT FS+ N + G V++G G A+K + GD +E+ L +I+H +++ + G C+ L+Y+Y + LH K L W RV+IA A L YLH +P IH+++KSSNILL+ NF A+V++FGLAR D + +T V+GT GYMAPEY +G +T K DVF+ GV++LEL++G + + G+E L R ++ E+ + DP LG Y F M + A CV H + RP M ++ + + L Sbjct: 365 FSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLKIGGGQGDREFKAEVETLSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDLYFHLHGEKS----VLDWATRVKIAAGAARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCN---THITTRVIGTFGYMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLISHAIETEEFDSLADPKLGGNYVESEMFRMIEAAGACVRHLATKRPRMGQIVRAFESLAAEDL 657
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.352e-41 Identity = 105/287 (36.59%), Postives = 159/287 (55.40%), Query Frame = -2 Query: 669 LKAATGNFSE--SNRIKGSVFRGSFQ-GDAAAMKV-------MNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLH-SNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGE-ELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTL 1493 L+ AT NFS+ GSV+ G + G A+K+ +N +E+ LL +I+H N++ L G+C LVYEY GS+ D LH S+ ++ L W R+QIA D A L YLH NP IH+++KSSNILLD+N RAKV++FGL+R E E ++ GT GY+ PEY + +T K DV++ GV++ ELLSG+ +AE G E ++ + ++ +GD + IDP + ++ + +A++A CV RP M +V+V + Sbjct: 601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKP---LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTE---EDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGD-----VCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAI 876
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: PTI11_ARATH (PTI1-like tyrosine-protein kinase 1 OS=Arabidopsis thaliana GN=PTI11 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.800e-41 Identity = 104/299 (34.78%), Postives = 159/299 (53.18%), Query Frame = -2 Query: 657 FEDLKAATGNFSESNRIK----GSVFRGSF-QGDAAAMKVMN--------GDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNK----FQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKIL 1502 +++K T NF I G V+ + G A A+K ++ + S+++++ ++ H N+I+L GFCV L YE+A GS+ D+LH K Q TL W RV+IA + A L YLH PP IH++++SSN+LL +++AK+ +F L+ DN L TR V+GT GY APEY G +T K DV++ GV++LELL+G + G++ L L D K+K IDP L +YP +A +A +CV ++ RP+M+ V+ L +L Sbjct: 58 LDEVKEKTENFGSKALIGEGSYGRVYYATLNDGVAVALKKLDVAPEAETDTEFLSQVSMVSRLKHENLIQLLGFCVDGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWITRVKIAVEAARGLEYLHEKSQPPVIHRDIRSSNVLLFEDYKAKIADFNLSNQAPDN-AARLHSTR-VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSED----KVKQCIDPKLKADYPPKAVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLL 350
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.800e-41 Identity = 101/310 (32.58%), Postives = 166/310 (53.55%), Query Frame = -2 Query: 627 YKFEDLKAATGNFSESNRIK----GSVFRGSFQ--GDAAAMKVM--NG-----DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLH---SNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSS 1508 + F++L ATGNF + G VF+G+ + A+K + NG + E+ L +H N+++L GFC LVYEY +GS+ D LH S K L W R++IA A L YLH+ + PP I+++LK SNILL +++ K+++FGLA+ D+ ++ V+GT GY AP+Y G +T K D+++ GV++LEL++G A + K ++ L R + + R +DP L +YP+ + ++ +CV + RP ++DV++ L+ + SS +DP+S Sbjct: 91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKK----PLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDK--THVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKD---RRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSK--YDPNS 389
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: F6I6X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00240 PE=4 SV=1) HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0 Identity = 339/590 (57.46%), Postives = 438/590 (74.24%), Query Frame = -2 Query: 600 AYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADE-KSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGG--LQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEFERSTSLT 2360 AYLL++ + I+++N +S DV+ I ++++VPVNCSCSG +YQ+NASYT+K+D+E YF+++N+TYQGLTTCQA+KA NP YRNL VG L+VP+ CACPT NQ AG YLL+Y+VTWGD ISS A+TFG D+ +S+ +AN LS D+IFPFTP+LVPL P+ I+ S PPP S G +D SSKKWV++GVG+G L+LL +G + C RR+ Q+ + +P+ A KP + N+ S+S+SS G+ HA+ESLT YK+E+L+ A G F E+NRIKG V+RG +GD AA+K+M GDVS EIN+LK INH+N+IRLSGFCVH+GNTYLVYEYA+ GS+SD LH + + TL WKQRVQIA DVA+ALNYLHN+ NPP IHKNLKSSNILLD N R KV NFGLAR +E+ + GG LQLTRHVVGT+GYMAPEY+ENG+ITP+LD FA GV+ILELL+G++AA ++ G L S+ VL+GD+VR KL+ FIDP L +YP DLAF+MAQLAK C+AHDL+ARP+M D+L+ LSKILSSSLDWD +F+ + L+ Sbjct: 17 AYLLNSNPSDIATINQIS-DVNKIPKDTVLIVPVNCSCSG----HFYQYNASYTLKYDFENYFTLANNTYQGLTTCQALKAHNPYYYRNLSVGMDLLVPLMCACPTANQTAAGFNYLLTYLVTWGDYISSIADTFGVDDIQSIFDANSLSS-DLIFPFTPILVPLKNPPTRIQTTLSPPPPKSPVVPNG---GGAD--SSKKWVYVGVGIGATLLVLLMPSGIILCLLRRRLQSRQDKPVPGAGGGTK-----KP----SYSMENNISLSVSSGGIHHAVESLTVYKYEELQKAAGFFGEANRIKGCVYRGLIKGDDAAIKMMKGDVSEEINILKLINHSNVIRLSGFCVHKGNTYLVYEYAENGSLSDWLHGDG-RIGSTLGWKQRVQIACDVANALNYLHNFTNPPCIHKNLKSSNILLDGNMRGKVANFGLARRLENEEGGGGRLQLTRHVVGTQGYMAPEYMENGLITPELDAFAFGVVILELLTGKEAAPSQNKEGRG-LCVSVNEVLEGDDVRHKLRGFIDPCLTHDYPFDLAFTMAQLAKSCIAHDLNARPTMFDILIILSKILSSSLDWDSFDDFQSTGFLS 584
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: A0A078HLH8_BRANA (BnaA04g19600D protein OS=Brassica napus GN=BnaA04g19600D PE=4 SV=1) HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0 Identity = 354/647 (54.71%), Postives = 462/647 (71.41%), Query Frame = -2 Query: 621 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFD-YETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVG-ESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDS-TTYTPNSWSVSIS-----SQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSS-EINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAAN-AEKNGGEE-LLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEF 2528 T+AQQ YVNN QLACE+ DN I+ GF+CNG RSC+SY+TF S PP YNT SIA LL+A A +I +LNNL++ + I + +VV+P CSCSG +YQHNA+Y + + ETYFSI+NDTYQ L+TCQAM +QNP RNL G L+VP+RCACPT NQ AG +YLL+Y+V GDS+S+ AE F + +V NEL+ D+I F FTP+LVPL EP+ I SP P + PV + S SS KW++IGVG+G G LLL+ + FC+++R + TAS S T + N WS+++S + G++ AIESLT Y+F DL++AT NFSE N+IKGSV++ + GD AA+KV+ GDVSS EI+LLKK+NH+NIIRLSGFC+ EG +YLVYEY++ GSVSD LHS+ + S T W+QRV+I D+A+AL+YLHNY+ PP+IHKNL+S+N+LLD NF+AK++NFG+AR +++ D LQLTRHV GT+GY+APEY+ENGVITPKLDVFA GV++LELLSG++A +K EE LL I VL G+NVREKLK F+D SLG EYPL+LAF+MAQLAK CVA D+++RPS+A VL TL I+SSS+DW+PS + Sbjct: 27 TKAQQPYVNNHQLACENRDFDN-ITNGFTCNGP-RSCRSYLTFWSLPP-YNTPNSIATLLNASAAEIQTLNNLTSLTTVIPTRRLVVIPTTCSCSG--GGGFYQHNATYRLSGERQETYFSIANDTYQALSTCQAMMSQNPYGERNLTAGLNLLVPLRCACPTANQTAAGFRYLLTYLVAQGDSVSAIAEMFRSSTPAVSSGNELTSDNIYF-FTPLLVPLRTEPTRIVITPPSPTPPVATPPQSPPVDPQGGSSSSHKWIYIGVGIGAGLLLLISILSLYFCYYKRSSK--------TASLIEQNKLTDSSTKRSLPTTSTNQWSIALSNSSDTTSGLKSAIESLTLYRFSDLQSATSNFSEENKIKGSVYKATINGDDAAVKVIKGDVSSSEISLLKKLNHSNIIRLSGFCIREGASYLVYEYSENGSVSDWLHSSNKKKSLT--WRQRVEICRDIAEALDYLHNYVTPPHIHKNLESNNVLLDSNFKAKISNFGVARILDEGDLD-LQLTRHVEGTQGYLAPEYVENGVITPKLDVFAFGVVVLELLSGKEAVTTVDKEEKEEMLLCREINNVLGGENVREKLKEFMDSSLGDEYPLELAFTMAQLAKSCVAPDINSRPSIAQVLTTLLMIVSSSIDWEPSHDL 656
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: V4LN18_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10016366mg PE=4 SV=1) HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0 Identity = 347/643 (53.97%), Postives = 461/643 (71.70%), Query Frame = -2 Query: 621 QAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQ----GVRHAIESLTRYKFEDLKAATGNFSESNRIKGSVFRGSFQGDAAAMKVMNGDVSS-EINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGE---ELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEF 2525 +AQQ YVNN QL CE+ DN I+ G +CNG SC+SY+TF S PP YNTA SIA LL+ A +I S+NNL+ ++ITP+ +V++P NCSCSG +YQHNA+Y + +ETYFS++NDTYQ L+TCQAM +QN +NL G+ L+VP+RCACPT NQ AG YLL+Y+V+ GDS+S+ A+ F + +VL+ NEL D+I+ FTP+ VPL EP+ I S PPP + P S SS KWVF+G+G+G G LLL+ L F F++R+ + + + +++ + T TP WS+ +S G++ AIESLT Y+F DL++AT NFSE N+IKGSV+R + GD AA+KV+ GDVSS EI+LLKK+NH+NIIRLSGFC+ EG +YLVYEY++ GS+ D LHS+ + TL+WKQRV+IA D+A+AL+YLHNY+ PP+IHKNL+S+NILLD NFRAK++NFG+AR I D+ + LQLTRHV GT+GY+APEY+ENGVITPKLDVFA GV++LELLSG++ +K GE E+L I+ VL G+NVREKLK F+DPSL EYPL+LA++MAQLAK CVA DL++RPS+A VL L I+SSS+DW+PS + Sbjct: 22 EAQQPYVNNRQLDCENRAFDN-ITNGNTCNGPT-SCRSYLTFWSHPP-YNTANSIAGLLNVSAAEIQSINNLTTVTATITPRQLVIIPANCSCSGA---GFYQHNATYRIS-RHETYFSVANDTYQALSTCQAMISQNSYGEKNLVPGSDLLVPLRCACPTVNQTAAGFNYLLTYLVSQGDSVSTIADMFRSTTDAVLDGNELKSSDLIYFFTPLSVPLRTEPTRIVTSPSPPPPVATPPQSPPVE-PPGSSSSHKWVFVGIGIGAGLLLLISLFALFFFFYKRRSKPEQNKLTDSSTKHSVL-----------TTTPPQWSIDLSKSSDTFGLKSAIESLTIYRFHDLQSATSNFSEENKIKGSVYRATINGDDAAVKVIKGDVSSSEISLLKKLNHSNIIRLSGFCIREGTSYLVYEYSENGSIGDWLHSSDKKR--TLTWKQRVEIARDIAEALDYLHNYVTPPHIHKNLESTNILLDSNFRAKISNFGVAR-ILDDGDLDLQLTRHVEGTQGYLAPEYVENGVITPKLDVFAFGVVVLELLSGKEVVTIQKEKGEEEVEMLCKEIKNVLGGENVREKLKAFMDPSLENEYPLELAYTMAQLAKSCVAPDLNSRPSIAQVLTKLLMIVSSSMDWEPSHDL 642
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: G7J6Q7_MEDTR (LysM type receptor kinase OS=Medicago truncatula GN=MTR_3g080170 PE=4 SV=2) HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0 Identity = 331/643 (51.48%), Postives = 444/643 (69.05%), Query Frame = -2 Query: 612 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMKFDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETFGADEKSVLEANELSEDDIIFPFTPVLVPLSEEXXXXXXXXXXXXXXXXXXXXXXPVGES-DSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGS-VFRGSFQGDAAAMKVMNGDVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNKFQTSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDND--EGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGEDAANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSEFERS 2528 T++QQ Y++N QL C+DP+K + G CN SCQSY+TF+S PP YNT +IAYLL++ I++ NN+S V I +M+ VPVNC CSG YYQHN+SYT+K + E YF+++N+TY+ LTTCQA+ AQN NL G + VP+RCACPT QI G KY+L+Y+V+ G+ AE FG D +SVL+AN+L ED +IF FTP++VPL ++P PP + + + + DS SSKKWV +G+ VG LLL+ Q HK + +++ + S++ T N S S+ S+G+R+A ESLT Y+FE+L AT FSE+NRI+GS +R S +GD AA+KV+ GDVS EIN+L++INH NI R+SG VH+G+TYLVYE+A+ GS+ D +H +K S L+WKQRVQIA DVADALNYLHNY+NPP+IHKNLKS N+LLD NFR K+ NFGLAR ++D D E G Q TRHVVGT GYM PEYIENG+++PK+DVFA GV++LELLSG +A +KNGGE+ LSA + VL+GDNVREKL F+DP+L EYPL++ +SMA++AK CVA+ + RP++++VLV LSKI SSS++ DPS E++ Sbjct: 23 TKSQQEYLDNHQLDCDDPSKS---TYGNICNS-INSCQSYLTFKSSPPHYNTPATIAYLLNSTVPLIANANNISY-VDPIPTDTMITVPVNCYCSG----HYYQHNSSYTLKTEDENYFTLANNTYESLTTCQALDAQNIYGLTNLTAGLNMHVPLRCACPTSKQIENGFKYILTYLVSEGEYPELIAEIFGVDSQSVLDANKLIEDQVIFYFTPLMVPLKDKPPTKIQRTLPPPSTPLSKPHVENLARNKDSSSSKKWVVVGIAVGAAFLLLIFFVLLFCFC-----QQHKNKKKLSSAATKTTT---EEVSNTNTSITNP-SFSLCSEGLRYAFESLTVYEFEELHKATSFFSEANRIRGSSAYRASLKGDDAAVKVLKGDVSVEINILRRINHANITRISGLSVHKGSTYLVYEFAENGSLDDWIHFSKCINSVALTWKQRVQIAQDVADALNYLHNYVNPPHIHKNLKSDNVLLDGNFRGKLCNFGLARVVDDYDFGEEGFQFTRHVVGTHGYMPPEYIENGLVSPKMDVFAFGVVMLELLSGREAIVGDKNGGEKRLSAVVSEVLEGDNVREKLHAFMDPTLRGEYPLNMGYSMAEIAKRCVANYHNLRPNVSEVLVILSKIQSSSVNRDPSDVMEKT 647
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Match: A0A022RMN6_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002413mg PE=4 SV=1) HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0 Identity = 355/674 (52.67%), Postives = 455/674 (67.51%), Query Frame = -2 Query: 624 TQAQQGYVNNLQLACEDPTKDNNISRGFSCNGEQRSCQSYITFRSEPPFYNTAVSIAYLLDAQATQISSLNNLSADVSSITPKSMVVVPVNCSCSGTVNDSYYQHNASYTMK-----FDYETYFSISNDTYQGLTTCQAMKAQNPIDYRNLEVGNKLVVPIRCACPTHNQIRAGAKYLLSYIVTWGDSISSTAETF---GADEKSVLEANELSEDDIIFPFTPVLVPLS-EEXXXXXXXXXXXXXXXXXXXXXXPVGESDSKSSKKWXXXXXXXXXXXXXXXXXXXXXXXXFRRQRQAHKARPIATASXXXXXPFNLKPFSDSTTYTPNSWSVSISSQGVRHAIESLTRYKFEDLKAATGNFSESNRIKGS--VFRGSFQGDAAAMKVMNG-DVSSEINLLKKINHTNIIRLSGFCVHEGNTYLVYEYADKGSVSDLLHSNK--FQ---------------TSFTLSWKQRVQIAYDVADALNYLHNYINPPYIHKNLKSSNILLDVNFRAKVTNFGLARTIEDNDEGGLQLTRHVVGTKGYMAPEYIENGVITPKLDVFALGVIILELLSGED----------AANAEKNGGEELLSASIRVVLQGDNVREKLKNFIDPSLGPEYPLDLAFSMAQLAKICVAHDLSARPSMADVLVTLSKILSSSLDWDPSSE 2528 + AQQ YVNN QLAC +++ + GF CNG +C SY+TFRS P YNT +SIAYLL A A+QI++ NN+S DV + ++V+VPV CSCS +YYQHNASY +K + ETYF++SN TYQ LTTCQ+M++QNP DYR+L G +L VP+RCACPT NQ +G YLL+Y++ GD+ +S A F GAD + +L+AN LS +D+IF FTP+LVPL + +PPP P + G S+S+ KW+FIGVG+G L LL +RR+RQ++K SPPP P D T+ P S+SSQ +R AIE+LT YKFEDL AT +FSESNRI GS V+ GSF+GD A +K+M G DVS EIN L++INH++IIRLSGFC+H TYL+YEYA+KGS+++ L N Q T L WKQR+QIAYDVADALNYLHN+ NPPYIHKNLKSSNILLD N RAK+ +F L+RT+E +D+ +TRHVVGT GYMAPEYIE+G+ITPKLDVFALGV++LELLSG + N E + LLS I VL G++VREKLK F+DP LG EYPL++A+S+ +LA+ CVAH++ ARP+++DV V LSK+LSSSLDWDPS + Sbjct: 16 STAQQSYVNNKQLACN---TNDSTTLGFVCNGASSTCTSYLTFRSTPT-YNTPISIAYLLSADASQIAAANNIS-DVEFLPADTLVIVPVKCSCS----QNYYQHNASYILKNQEGTAETETYFTVSNVTYQSLTTCQSMESQNPYDYRHLYPGFRLTVPLRCACPTLNQTSSGFNYLLTYLIRQGDNYNSIAAAFSASGADVQGILDANRLSVNDLIFFFTPILVPLKIQPTKAFNNTLPAPPPPPPSNFPPNHNGGSNSR---KWIFIGVGIGAAVLFLLSSVLLYLLCYRRRRQSNK-------SPPPPPKLRADKSGDPTSAGPPFSDWSVSSQSIRSAIETLTVYKFEDLDKATSSFSESNRINGSSSVYLGSFKGDNAVIKIMKGGDVSREINALRQINHSHIIRLSGFCLHHDITYLIYEYAEKGSLTEWLRPNSSLLQKKLDSNDKHMNIISITERRLDWKQRLQIAYDVADALNYLHNFTNPPYIHKNLKSSNILLDGNLRAKIADFALSRTLEADDQN--VMTRHVVGTYGYMAPEYIESGLITPKLDVFALGVVMLELLSGREPIVDDDDVGKDKNKEGSHQMLLLSERIERVLSGESVREKLKEFVDPWLGDEYPLEVAYSLGELARRCVAHNIDARPNVSDVFVALSKLLSSSLDWDPSHD 668 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092691 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092691 ID=g.barbadense_cottongen_reftransV1_0092691; Name=g.barbadense_cottongen_reftransV1_0092691; organism=Gossypium barbadense; type=contig; length=2718bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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