g.barbadense_cottongen_reftransV1_0092653, g.barbadense_cottongen_reftransV1_0092653 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy Swiss-Prot
Match: TIF8_ARATH (Protein TIFY 8 OS=Arabidopsis thaliana GN=TIFY8 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.180e-47 Identity = 129/310 (41.61%), Postives = 166/310 (53.55%), Query Frame = 1 Query: 169 QQVKPAAMFHDFLGMK-PSNSSVVLAPKATDARF--XXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAG--NHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVPSAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALA 1083 Q + +FHDFLG K P+ +S +A D R + + + + +S G G +SSTSDL ER +G NHL+GI +GPRS++SG ++N +G+KRS SDS F E E+LH K+LRNG G S + + QPP G GG +HQ+S++RFKD VGPSVI+Q AADEGSRTG+KGPGILSS +P + PS TG +R+ L S+++QMTIFYGGQAHVFDDVHPNKADVIMALA Sbjct: 20 QTEQDKLLFHDFLGSKNPTLASTSMA----DHRLPPDNKAAKAAMTPSTASASSAGGLGGLSSTSDL-VERHSGGGNHLDGIQLFGPRSDVSGSIMSNRFSGNKRSNSDSHFTTQEHPETLHWSKLLRNGPG-----------------SFSMNVNPLANQPPRG-----------------------GGQISHLLHQLSTSRFKDENVGPSVIAQTAADEGSRTGMKGPGILSSFT---MPNSSKLESFAPS----NTG------------NRKDLASSTKQMTIFYGGQAHVFDDVHPNKADVIMALA 265
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: A0A067KBC5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13218 PE=4 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 5.245e-152 Identity = 262/422 (62.09%), Postives = 313/422 (74.17%), Query Frame = 1 Query: 163 QHQQVKPAAMFHDFLGMKP----SNSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAF----------MGHESLESLHLMKMLRNGAGGERPRRS-NEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP--SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRT-GENYAPGGEPE--AVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRNL----EAGTEDKREV 1356 QQVK AMFHDFLGMK ++S V LAPK DA SPSAS++A + GG RGP+S+TSDL SERQ GNHLEGIP+YGPRS+ISGP+I+N + GSKRS SDSAF MGH+SLESLHLMKM++NG GGERPRRS N+DE+F GM++MRP+S S+ILQ AGSRL+ N SKWERS+P +A+QY R G FVPF+HQV +N+F+D GPSVISQ+AADEGSRTGIKGPGILSSIN TEK SS + SG +PK+G HNS+PE P SR GLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNG SWSTTYSPK VR GENY GE + + F RELRG+++ GN++Q +GSG+R+ TG G++++ + R+ EA TE+KREV Sbjct: 33 NQQQVK--AMFHDFLGMKAAAATTDSPVGLAPKNADA-------SPSASLSAGASSGGGVRGPLSTTSDLASERQVGNHLEGIPFYGPRSDISGPEISNRVGGSKRSNSDSAFTGSSRDGIPQMGHDSLESLHLMKMIKNGGGGERPRRSTNDDEVFYGMQAMRPTSASLILQSSAGSRLDANVSKWERSIPVGTAIQYPPRSGLFVPFMHQVPANKFRDINAGPSVISQSAADEGSRTGIKGPGILSSINTGTGITEKNSSGALASGSKPKSGTHNSEPEFSTPSSRHGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGASWSTTYSPKPTVRPGGENYMTTGENDTGVAANTKFQRELRGRLSSIGNSTQGSGSGDRVSTPTGGRHGSMIITEESRDQVKAGEASTEEKREV 445
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: A0A061GPP4_THECC (TIFY domain protein 8 isoform 1 OS=Theobroma cacao GN=TCM_038313 PE=4 SV=1) HSP 1 Score: 459.529 bits (1181), Expect = 8.264e-151 Identity = 276/360 (76.67%), Postives = 288/360 (80.00%), Query Frame = 1 Query: 85 AVLKMAEQSKXXXXXXXXXXXXXXHLQHQQVKPAAMFHDFLGMKPSNSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXX-XXXTSDLGS------------------------------ERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP---SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKA 1062 AVLKMA+QSKTTNTNNANT NT THLQHQQ MFHDFLGMK ++S VVLA KATDARFSEASPS SASV ASSGGGG ISSTSDLGS ERQ GNHLEGIPYYGPRSEISGP+I+N L GSKR SDSAFMGHESLESLHLMKMLRNGAGGER RRSNEDE+FLGM+SMRPSS S+ILQPP GSRLEGNASKWERSVP SAVQY RGGHFVPFVHQ SSNRFKDT VGPSVISQ+AADEGSRTGIKGPGILSSIN SG+PTEK SS +VPSG RPK+GAH SDPE VPPSRQGLTSASRQMTIFY GQAHVFDDVHPNK Sbjct: 2 AVLKMAQQSKTTNTNNANTNNTSTHLQHQQQVKPTMFHDFLGMKATDSPVVLAHKATDARFSEASPSASASVGASSGGGGGAGRGPISSTSDLGSGVAVMVCDDFIYSMLLCDVVVLYLMLPSPVERQVGNHLEGIPYYGPRSEISGPEISNRLVGSKRGNSDSAFMGHESLESLHLMKMLRNGAGGERSRRSNEDEVFLGMQSMRPSSASLILQPPTGSRLEGNASKWERSVPMIGSAVQYGPRGGHFVPFVHQASSNRFKDTNVGPSVISQSAADEGSRTGIKGPGILSSINTSGIPTEKNSSGVVPSGARPKSGAHISDPESSVPPSRQGLTSASRQMTIFYAGQAHVFDDVHPNKV 361 HSP 2 Score: 154.836 bits (390), Expect = 4.527e-37 Identity = 80/104 (76.92%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1060 ADVIMALAGSNGGSWSTTYSPKSAVR-TGENYAPGGEPEAVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRN----LEAGTEDKREV 1356 ADVIMALAGSNGGSWSTTYSPKSAVR ENYAPG EPEAVGS+ FSRE RG++AV+GN SQ TGSGERI IQTGVPQGTIV+A+D RN E EDKREV Sbjct: 428 ADVIMALAGSNGGSWSTTYSPKSAVRPVSENYAPGEEPEAVGSMVFSREFRGRIAVAGNTSQGTGSGERISIQTGVPQGTIVIAKDARNPVQAAEPSAEDKREV 531
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: B9RPD1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0927570 PE=4 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 7.653e-145 Identity = 248/410 (60.49%), Postives = 295/410 (71.95%), Query Frame = 1 Query: 187 AMFHDFLGMKPS---NSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAF----------MGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP--SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRT-GENYAPGGEPEAVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRNL----EAGTEDKREV 1356 AMFHDFLGMKPS +S VVL K + ++ A ++ GG R P+S+TSDL SERQAGNHLEGIP+YGP S+ISGP+I+N LAGSKRS SDSAF M H+SLESLHLMKML+NG GG+R RRSN+DE F GM++MRP+S S+ILQ G RL+ N SKWER +P +A+QY R G FVPFVHQVS+N+F++ G S+ISQ+AADEGSRTGIKGPGILSS+N +EK SS +PSG + K+G H SDPE P SRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPK +R GE + GE EA G A RE R +++ N +Q GSG+R+ + TG G+I++A RN EA TEDKREV Sbjct: 42 AMFHDFLGMKPSATADSPVVLPSK----NLPPDASPSASLSAGAASSGGGVRCPLSATSDLASERQAGNHLEGIPFYGPMSDISGPEISNRLAGSKRSNSDSAFTASSKDGIPHMAHDSLESLHLMKMLKNGTGGDRHRRSNDDEAFYGMQAMRPTSASLILQSSTGGRLDANVSKWERPIPVGTAIQYPPRAGQFVPFVHQVSANKFREMNAGTSIISQSAADEGSRTGIKGPGILSSLNTGSGISEKNSSGALPSGSKLKSGTHVSDPESSTPSSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKPTMRPGGEIHMTSGENEA-GDAACQREFRARLSGITNTTQGVGSGDRVSMPTGGHHGSIMIADKTRNPGQAGEASTEDKREV 446
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: M5XBP7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005965mg PE=4 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 9.254e-144 Identity = 250/395 (63.29%), Postives = 289/395 (73.16%), Query Frame = 1 Query: 190 MFHDFLGMKPSNSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGH----------ESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP----SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRTG-ENYAPGGEPEA--VGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRN 1323 +FHDFLGMKP +S VVLAPKA+D R SE SPS SAS+ ASSGGG TSDLGSERQAGNHLEG+P+YGPRS+ISGP+I+N L GSKRS SDS F G +SLESLHLMKMLRNG GGERPRRSN+DE + +RP+S S I QPP G R++ N SKW+RS P +AVQY RGGHFVPFVHQ+ SNRF+D P+ ISQ+AADEGSRTGIKGPGILSSINAS E+ SS ++PSG R K+G + +PEP PSR G TSA RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYS K R G EN+ P GE EA +IA RE RG++ + GN+SQA G +R+ G QG+ +A+D RN Sbjct: 31 IFHDFLGMKPGDSPVVLAPKASDCRLSEVSPSASASLGASSGGGRGPIST---TSDLGSERQAGNHLEGVPFYGPRSDISGPEISNRLLGSKRSNSDSTFKGSSRDGVPHTGPDSLESLHLMKMLRNGTGGERPRRSNDDEAVFATQPLRPTSASHIFQPPLGGRVDTNISKWDRSTPMNLGAAVQYPPRGGHFVPFVHQLPSNRFRDANASPANISQSAADEGSRTGIKGPGILSSINASSSAPERNSSGVLPSGSRQKSGTNILEPEPST-PSRHGFTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSLKPTTRPGSENHMPSGEVEAGTASNIALLREYRGRLCIPGNSSQAVGFADRVLTPAGGHQGS-NLAKDTRN 420
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: B9H9Q4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26370g PE=4 SV=1) HSP 1 Score: 434.491 bits (1116), Expect = 1.521e-142 Identity = 269/447 (60.18%), Postives = 319/447 (71.36%), Query Frame = 1 Query: 79 MAAVLKMAEQSKXXXXXXXX------XXXXXXHLQHQQVKPAAMFHDFLGMK-PSNSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAF---------MGHESLESLHLMK--MLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVPSAV-QYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRTG-ENY-APGGEPEAVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRN-LEAGTEDKRE 1353 MA VL MA+QSK N N+++ +T T Q Q+ AMFHDFLGMK ++S VVLAPK D ++ A+ G GRGP+SSTSDL SERQAGNHLEGIP+YGPRS+ISGP+I+N LAGSKRS SDSAF M H+S+ESLHLMK ML+NG G ERPRRSN+DE+F GM+ MRPSS S+ILQP AGSRL+ N SK +RS+P + Y RGG FVPF HQV +NRF+DT GPS++SQ+AADEGSRTGIKGPGILSSINA +EK SS +PSGG+PKTG H S+PE P SRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPK G E+Y GGE ELRG+++V+GNA++ GS +RI TG G+IV+A++ RN ++AG E Sbjct: 1 MAVVLTMAQQSKNNNANSSHNNSVYVNNSTATSQQQQKQDLKAMFHDFLGMKGTTDSPVVLAPKNKDG--------SPSASASLGASSGGGRGPLSSTSDLASERQAGNHLEGIPFYGPRSDISGPEISNRLAGSKRSNSDSAFTGSRDGIPQMAHDSIESLHLMKIQMLKNGGGRERPRRSNDDEVFYGMQPMRPSSASLILQPSAGSRLDANVSKQDRSIPMGIGAYPPRGGQFVPFTHQVPTNRFRDTNAGPSIVSQSAADEGSRTGIKGPGILSSINAGSGISEKNSSRGLPSGGKPKTGIHISEPESSNPSSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKPTASQGSESYMTSGGE----------YELRGRLSVTGNATRGVGSSDRISTPTGGHHGSIVIAKERRNAVQAGEPSNEE 429
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: B9IKS0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s01160g PE=4 SV=2) HSP 1 Score: 432.565 bits (1111), Expect = 9.702e-142 Identity = 266/450 (59.11%), Postives = 316/450 (70.22%), Query Frame = 1 Query: 79 MAAVLKMAEQSKXXXXXX------XXXXXXXXHLQHQQVKPAAMFHDFLGMKPS-NSSVVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAF---------MGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVPSAV-QYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRTG-ENYAPGGEPEAVGSIA----FSRELRGKMAVSGNASQATGSGERIPIQTGVPQG-TIVMARDGRNL----EAGTEDK 1347 MA V+ M +QSK N N+ +T T Q Q+ + AMFHDFLGMK + +S VVLAPK D ++ A+ G GRGP+SSTSDL SERQAGNHLEGIP+YGPRS+ISGP+I+N LAGSKRS SDSAF M H+S ESLHLMKML+NG GGE RRSN+DE+F GM+S RPSS S+ LQP AG+RL+ N SKWERS+P V Y +RGG FVPF HQ+ +NRF+DT GPSVISQ+AADEGSRTGIKGPGILSSINA +EK SS + SGG+PK G H S+PE P S++GLTSASRQMTIFYGGQAHVFDDVHPNKADVIM+LAGSNGGSWSTTYSPK R G E++ E E G++A F E RG+ V+GNA+ A GSG+RI G G +I++A++ RNL E EDK Sbjct: 1 MAVVMTMVQQSKNNNANSGHSNSVNINNSTATSQQQQKQQVRAMFHDFLGMKATTDSPVVLAPKYKDG--------SPSASASLGASSGGGRGPLSSTSDLASERQAGNHLEGIPFYGPRSDISGPEISNRLAGSKRSNSDSAFTGPRDGVPQMAHDSTESLHLMKMLKNGGGGEWSRRSNDDEVFYGMQSKRPSSASLSLQPSAGNRLDANVSKWERSIPMGVGAYPTRGGQFVPFTHQIPTNRFRDTNAGPSVISQSAADEGSRTGIKGPGILSSINAGSGISEKNSSGGLSSGGKPKIGIHISEPESSTPASQKGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMSLAGSNGGSWSTTYSPKPTARQGSESFMTSNEYE--GAVAANTPFPHEFRGRTFVTGNATHAVGSGDRISTPAGGHHGSSIIIAKETRNLVQAREPSNEDK 440
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: A0A067GLR5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014180mg PE=4 SV=1) HSP 1 Score: 411.764 bits (1057), Expect = 7.762e-134 Identity = 243/431 (56.38%), Postives = 301/431 (69.84%), Query Frame = 1 Query: 88 VLKMAEQSKXXXXXXXXXXXXXXHLQHQQVKPAAMFHDFLGMKPSNSS--VVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP----SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVR-TGENYAPGGEPE--AVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRNLEAGTEDKRE 1353 ++ MA+Q+K N+N N T + Q +VKP M +DFLGMKPS VVLAPK PS + +S GG GRGPISS+SDL SE+Q GNHLEG+P+YG RS++SGP+I+N LAGSKRS S+S FMGH+ E++HLMK+LRN A GE+ +RS +DE+F M+ +RP+S SV+LQP SR++ N S+WER+ P AVQY RG VPF+HQV +NRF+D GPS+ISQ+AADEGSRTGIKGPGIL+SINA G +EK SSA +P G +PK+G +PE PSRQ LTSA RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKS VR GEN+ G+ E G+ A +E RG+++V GN S T S +RI TG G ++A+D R+ G E E Sbjct: 5 IMVMAQQNKPNNSNATNITKSSDSQQQLKVKP--MLYDFLGMKPSPDCLPVVLAPKPA-------VSEPSLASVGASSAGGGGRGPISSSSDLASEKQVGNHLEGVPFYGTRSDVSGPEISNRLAGSKRSNSESGFMGHDYPENMHLMKILRNAAEGEQSKRSKDDEMFYRMQQLRPTSASVMLQPSNISRIDANVSRWERTNPVNVGPAVQYPLRGSQLVPFMHQVPTNRFRDANAGPSIISQSAADEGSRTGIKGPGILNSINAIGGLSEKNSSAPLPGGSKPKSGTVILEPESST-PSRQELTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSTVRPVGENFLASGDLEGRVAGNTASPQEFRGRLSVIGNTSHGTSSNDRISTPTGCKGGGGIIAKDTRSPNQGAEPSNE 425
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: D7SUP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04950 PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 4.008e-133 Identity = 245/417 (58.75%), Postives = 295/417 (70.74%), Query Frame = 1 Query: 190 MFHDFLGMK-PSNSSVVLAPKAT----DARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGH----------ESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP----SAVQYASRGGHFVPFVHQVSSNRFKDTT---VGPSVISQAAADEGSRTGIKGPGILSSI--NASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVRTGENYAPGGEPEA--VGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRN----LEAGTEDKR 1350 +FHDFLGM S+S VV APK DAR S + ++ A++ G GRGPIS+TSDLGSERQAG+H +G+P+YGP+S+ISGP+I+N LAGSKRS SDS FMG ESLES HLMK+LRNG GG+RPRRS+++E+FLG++S+RP+S S+ILQPP GSR + N SKW+RSV VQY R G F PF+HQV NRFKD GPS +SQ AADEGSRTGIKG GILSSI NASG +E+ S ++PSG RPK+ H +PE PSR G TS+SRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKS V+ P GE E G+ F RE RG+++++GN SQ GSG+RI TG PQG + + +D RN E TE+KR Sbjct: 27 IFHDFLGMSCASDSPVVFAPKTVGHGGDAR---RSEASPSASASAGASSGGGRGPISTTSDLGSERQAGDHFDGVPFYGPKSDISGPEISNRLAGSKRSNSDS-FMGSSRDGVPQIGPESLESSHLMKILRNGTGGDRPRRSSDEELFLGLQSLRPTSASLILQPPTGSRTDVNLSKWDRSVTMNVNPTVQYPLRAGQFAPFLHQVPPNRFKDANSGNAGPSNLSQPAADEGSRTGIKGSGILSSITANASGSVSERNPSGLLPSGNRPKSRTHILEPESSTAPSRLGSTSSSRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSTVKPVGESTPNGENETGMAGNSMFPREFRGRLSLTGNPSQGYGSGDRILTLTGAPQG-VNIPKDTRNPVKAAEPSTEEKR 438
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: A0A067GIZ2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014180mg PE=4 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 4.023e-132 Identity = 243/431 (56.38%), Postives = 301/431 (69.84%), Query Frame = 1 Query: 88 VLKMAEQSKXXXXXXXXXXXXXXHLQHQQVKPAAMFHDFLGMKPSNSS--VVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGSERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP----SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVR-TGENYAPGGEPE--AVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRNLEAGTEDKRE 1353 ++ MA+Q+K N+N N T + Q +VKP M +DFLGMKPS VVLAPK PS + +S GG GRGPISS+SDL SE+Q GNHLEG+P+YG RS++SGP+I+N LAGSKRS S+S FMGH+ E++HLMK+LRN A GE+ +RS +DE+F M+ +RP+S SV+LQP SR++ N S+WER+ P AVQY RG VPF+HQV +NRF+D GPS+ISQ+AADEGSRTGIKGPGIL+SINA G +EK SSA +P G +PK+G +PE PSRQ LTSA RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKS VR GEN+ G+ E G+ A +E RG+++V GN S T S +RI TG G ++A+D R+ G E E Sbjct: 5 IMVMAQQNKPNNSNATNITKSSDSQQQLKVKP--MLYDFLGMKPSPDCLPVVLAPKPA-------VSEPSLASVGASSAGGGGRGPISSSSDLASEKQVGNHLEGVPFYGTRSDVSGPEISNRLAGSKRSNSESGFMGHDYPENMHLMKILRNAAEGEQSKRSKDDEMFYRMQQLRPTSASVMLQPSNISRIDANVSRWERTNPVNVGPAVQYPLRGSQLVPFMHQVPTNRFRDANAGPSIISQSAADEGSRTGIKGPGILNSINAIGGLSEKNSSAPLPGGSKPKSGTVILEPESST-PSRQELTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSTVRPVGENFLASGDLEGRVAGNTASPQEFRGRLSVIGNTSHGTSSNDRISTPTG---GGGIIAKDTRSPNQGAEPSNE 422
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Match: A0A067GWD1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014180mg PE=4 SV=1) HSP 1 Score: 407.142 bits (1045), Expect = 5.566e-132 Identity = 243/432 (56.25%), Postives = 301/432 (69.68%), Query Frame = 1 Query: 88 VLKMAEQSKXXXXXXXXXXXXXXHLQHQQVKPAAMFHDFLGMKPSNSS--VVLAPKATDARFXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDLGS-ERQAGNHLEGIPYYGPRSEISGPDINNSLAGSKRSFSDSAFMGHESLESLHLMKMLRNGAGGERPRRSNEDEIFLGMKSMRPSSTSVILQPPAGSRLEGNASKWERSVP----SAVQYASRGGHFVPFVHQVSSNRFKDTTVGPSVISQAAADEGSRTGIKGPGILSSINASGVPTEKGSSAIVPSGGRPKTGAHNSDPEPLVPPSRQGLTSASRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSAVR-TGENYAPGGEPE--AVGSIAFSRELRGKMAVSGNASQATGSGERIPIQTGVPQGTIVMARDGRNLEAGTEDKRE 1353 ++ MA+Q+K N+N N T + Q +VKP M +DFLGMKPS VVLAPK PS + +S GG GRGPISS+SDL S E+Q GNHLEG+P+YG RS++SGP+I+N LAGSKRS S+S FMGH+ E++HLMK+LRN A GE+ +RS +DE+F M+ +RP+S SV+LQP SR++ N S+WER+ P AVQY RG VPF+HQV +NRF+D GPS+ISQ+AADEGSRTGIKGPGIL+SINA G +EK SSA +P G +PK+G +PE PSRQ LTSA RQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKS VR GEN+ G+ E G+ A +E RG+++V GN S T S +RI TG G ++A+D R+ G E E Sbjct: 5 IMVMAQQNKPNNSNATNITKSSDSQQQLKVKP--MLYDFLGMKPSPDCLPVVLAPKPA-------VSEPSLASVGASSAGGGGRGPISSSSDLASVEKQVGNHLEGVPFYGTRSDVSGPEISNRLAGSKRSNSESGFMGHDYPENMHLMKILRNAAEGEQSKRSKDDEMFYRMQQLRPTSASVMLQPSNISRIDANVSRWERTNPVNVGPAVQYPLRGSQLVPFMHQVPTNRFRDANAGPSIISQSAADEGSRTGIKGPGILNSINAIGGLSEKNSSAPLPGGSKPKSGTVILEPESST-PSRQELTSAGRQMTIFYGGQAHVFDDVHPNKADVIMALAGSNGGSWSTTYSPKSTVRPVGENFLASGDLEGRVAGNTASPQEFRGRLSVIGNTSHGTSSNDRISTPTGCKGGGGIIAKDTRSPNQGAEPSNE 426 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 1
BLAST of g.barbadense_cottongen_reftransV1_0092653 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092653 ID=g.barbadense_cottongen_reftransV1_0092653; Name=g.barbadense_cottongen_reftransV1_0092653; organism=Gossypium barbadense; type=contig; length=1958bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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