g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense

Overview


Name	g.barbadense_cottongen_reftransV1_0092647
Unique Name	g.barbadense_cottongen_reftransV1_0092647
Type	contig
Organism	Gossypium barbadense (Sea Island cotton)
Sequence length	3428

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium barbadense CottonGen RefTrans V1	2016-11-01
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot	2016-11-01
InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1	2016-11-02
Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL	2016-11-02

Homology

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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_HUMAN (Histone-lysine N-methyltransferase SMYD1 OS=Homo sapiens GN=SMYD1 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.896e-9
Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3

Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451
            CN  T+ D   L+++G G++P + ++NH C PN  ++F  G    V+++ H            I +  E+++SY++    +  R++ LK+QY F C C  C K
Sbjct:  179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQK 281

HSP 2 Score: 60.077 bits (144), Expect = 8.642e-8
Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 3

Query:  216 KGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKL 506
            KGR L A ++F+  ++I ++  Y  V  +SL    C  CF +   L +C  C    YC  +CQK  W  H+ EC  + +  K   +++    R+M ++
Sbjct:   17 KGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRV 114

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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_MOUSE (Histone-lysine N-methyltransferase Smyd1 OS=Mus musculus GN=Smyd1 PE=1 SV=3)

HSP 1 Score: 63.929 bits (154), Expect = 5.025e-9
Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3

Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451
            CN  T+ D   L+++G G++P + ++NH C PN  ++F  G    V+++ H            I +  E+++SY++    +  R++ LK+QY F C C  C K
Sbjct:  179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQK 281

HSP 2 Score: 63.929 bits (154), Expect = 5.432e-9
Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 3

Query:  204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNEN-VIPVTAMDNYNLVEALVSHMSDIDEKQL 620
            T   KGR L A ++F+  +VI ++  Y  V  +SL    C  CF +   L +C  C    YC  +CQK  W  H+ EC  + K  K   +++    R+M ++        E  ++ V  + N+      V H  + ++K+L
Sbjct:   13 TSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNH------VEHFGEEEQKEL 147

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD4_PONAB (SET and MYND domain-containing protein 4 OS=Pongo abelii GN=SMYD4 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.515e-8
Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 3

Query: 1176 QFACNA-------HT------ICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISY--VETAASTITRQKTLKEQYLFTCICVRC 1445
            Q  CNA       HT      + DS    L TG++PV+S++NHSC PN  + F   +A ++A Q I K  E+   Y   ++      RQ+ L+ QY F C C  C
Sbjct:  498 QLQCNAQAMTTIQHTGSKGSIVTDSRQVRLATGIFPVVSLLNHSCSPNTSMSFISTVATIQASQRIRKGQEILHCYGPHKSRMGVAERQQELRSQYFFDCACPAC 602

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y2140_DICDI (SET and MYND domain-containing protein DDB_G0292140 OS=Dictyostelium discoideum GN=DDB_G0292140 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.093e-8
Identity = 48/183 (26.23%), Postives = 80/183 (43.72%), Query Frame = 3

Query:  204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKK---------CSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLR---RKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKVH 716
            + P  GR L+A +D     VI+   PY    +++  +S C  CF +  L +         C  C  V YC ++C+ +++  HR ECQ+  +LD E     +P +   +KL +R   RK   +++     +D           ++D   K+   Y Q  N  +LI Q   +   + AE  S V 
Sbjct:  128 SHPINGRYLVATKDLDEQTVILRDLPYTWAVDHATCDSVCQHCFLEVPLNQQILPTDFYMCEGCQRVGYCSANCRCIDYSQHRFECQIFKELDTEE---YSPFLMSEIKLLVRTLSRKWLEDSITQTAGID-----------INDETIKKQNTYNQYKNPQSLIPQDNGLRYNDYAELVSNVE 296

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y3591_DICDI (SET and MYND domain-containing protein DDB_G0273591 OS=Dictyostelium discoideum GN=DDB_G0273591 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.653e-8
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 3

Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN--KLGQYGDIQES--AILEGYRCRDNGCSGF 1529
            CN   I     + +G  + P  S  NHSC+PN   V +G     +++  I K  +++ISY+    ST  R+  LK  Y F C C RCN   +   G +++S    +  + C    C+G 
Sbjct:  251 CNQFGIWTKNDKCIGMAVSPSSSYFNHSCIPNCESVRDGSDMTFKSLFPIKKGDQINISYLALDKSTKRRRDYLKFGYYFHCQCPRCNSTDIDPTGKLEDSLDNWISKFYCHQKKCTGL 369

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2RI11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 4.095e-117
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK
Sbjct:    1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 185

HSP 2 Score: 327.405 bits (838), Expect = 2.903e-97
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652
            +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC
Sbjct:  185 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 343

HSP 3 Score: 69.3218 bits (168), Expect = 7.680e-9
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L
Sbjct:  346 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 385

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2RBL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.764e-116
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK
Sbjct:    1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 185

HSP 2 Score: 327.02 bits (837), Expect = 2.863e-96
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652
            +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC
Sbjct:  185 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 343

HSP 3 Score: 111.694 bits (278), Expect = 2.498e-22
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1

Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090
            P+ E +Y  F       ++  S    + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT
Sbjct:  403 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 485

HSP 4 Score: 102.834 bits (255), Expect = 1.694e-19
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  389 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429

HSP 5 Score: 68.9366 bits (167), Expect = 1.198e-8
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L
Sbjct:  346 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 385

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2PQ85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 1.500e-112
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MEELQASLQPRGLTLSTFPDKGRSLLAARDFYP  VIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK
Sbjct:    1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYP--VIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 183

HSP 2 Score: 327.405 bits (838), Expect = 2.186e-96
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652
            +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC
Sbjct:  183 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 341

HSP 3 Score: 111.694 bits (278), Expect = 2.658e-22
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1

Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090
            P+ E +Y  F       ++  S    + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT
Sbjct:  401 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 483

HSP 4 Score: 102.834 bits (255), Expect = 1.661e-19
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  387 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 427

HSP 5 Score: 68.9366 bits (167), Expect = 1.151e-8
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L
Sbjct:  344 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 383

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2N9S9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.249e-111
Identity = 181/195 (92.82%), Postives = 183/195 (93.85%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVS----------HMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVS           MSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK
Sbjct:    1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSPILFSLKLEKDMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 195

HSP 2 Score: 327.405 bits (838), Expect = 2.968e-96
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652
            +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC
Sbjct:  195 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 353

HSP 3 Score: 111.694 bits (278), Expect = 2.983e-22
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1

Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090
            P+ E +Y  F       ++  S    + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT
Sbjct:  413 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 495

HSP 4 Score: 103.219 bits (256), Expect = 1.746e-19
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  399 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 439

HSP 5 Score: 68.9366 bits (167), Expect = 1.306e-8
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L
Sbjct:  356 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 395

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0B0MR97_GOSAR (Histone-lysine N-methyltransferase ASHR1-like protein OS=Gossypium arboreum GN=F383_24011 PE=4 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 7.448e-110
Identity = 179/185 (96.76%), Postives = 179/185 (96.76%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MEELQASLQPRGLTLSTF DKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQN NVIPVTAMDNYNLVEAL   MSDIDEKQLLLYAQMANLVNLILQLPN DIKEIAENFSK
Sbjct:    1 MEELQASLQPRGLTLSTFHDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNGNVIPVTAMDNYNLVEAL-KDMSDIDEKQLLLYAQMANLVNLILQLPNNDIKEIAENFSK 184

HSP 2 Score: 318.546 bits (815), Expect = 2.836e-93
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643
            +FACNAHTICDSELR LGTGLYPVISIINHSCLPNAVL+FEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA
Sbjct:  184 KFACNAHTICDSELRPLGTGLYPVISIINHSCLPNAVLIFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 339

HSP 3 Score: 104.375 bits (259), Expect = 5.673e-20
Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = 1

Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS 3081
            P+ E +Y  F       ++  S    + LLGETDDAIK FTKAVDILRITHGTSTPFMKELLMKLEEAR EA FKLSSREDS
Sbjct:  399 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKLFTKAVDILRITHGTSTPFMKELLMKLEEARAEALFKLSSREDS 478

HSP 4 Score: 100.908 bits (250), Expect = 8.685e-19
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEAL ICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  385 EEWKEALTICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 425

HSP 5 Score: 72.4034 bits (176), Expect = 9.355e-10
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEVYHPFSIILLRT EKLLE+L
Sbjct:  342 SGNLQEAIVLYKNIEKLQKEVYHPFSIILLRTREKLLEIL 381

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FFX1_THECC (SET domain protein isoform 3 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.689e-100
Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713
            ME+LQASLQ RGL++S  PDKGRSL+  +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL  P+IDIKEIAENFSK+
Sbjct:    1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186

HSP 2 Score: 280.796 bits (717), Expect = 1.060e-79
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649
            + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C  C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K
Sbjct:  185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342

HSP 3 Score: 93.5893 bits (231), Expect = 2.156e-16
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1

Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075
            LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E
Sbjct:  430 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 481

HSP 4 Score: 88.9669 bits (219), Expect = 5.832e-15
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEAL  CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  389 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429

HSP 5 Score: 63.5438 bits (153), Expect = 5.750e-7
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 2

Query: 1820 T*TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            T + + Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L
Sbjct:  344 TSSGNPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 385

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FH39_THECC (SET domain protein isoform 1 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 6.702e-100
Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713
            ME+LQASLQ RGL++S  PDKGRSL+  +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL  P+IDIKEIAENFSK+
Sbjct:    1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186

HSP 2 Score: 280.796 bits (717), Expect = 9.296e-80
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649
            + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C  C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K
Sbjct:  185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342

HSP 3 Score: 93.2041 bits (230), Expect = 2.202e-16
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1

Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075
            LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E
Sbjct:  428 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 479

HSP 4 Score: 88.9669 bits (219), Expect = 5.614e-15
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEAL  CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  388 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 428

HSP 5 Score: 67.0106 bits (162), Expect = 5.322e-8
Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            +SD Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L
Sbjct:  345 SSDPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 384

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FNX5_THECC (SET domain protein isoform 2 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.412e-100
Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713
            ME+LQASLQ RGL++S  PDKGRSL+  +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL  P+IDIKEIAENFSK+
Sbjct:    1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186

HSP 2 Score: 280.411 bits (716), Expect = 1.126e-79
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649
            + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C  C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K
Sbjct:  185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342

HSP 3 Score: 93.2041 bits (230), Expect = 2.198e-16
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1

Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075
            LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E
Sbjct:  429 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 480

HSP 4 Score: 88.9669 bits (219), Expect = 5.799e-15
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEAL  CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  389 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429

HSP 5 Score: 63.5438 bits (153), Expect = 5.687e-7
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 2

Query: 1820 T*TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            T + + Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L
Sbjct:  344 TSSGNPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 385

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2SDG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.890e-97
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652
            +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC
Sbjct:   52 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 210

HSP 2 Score: 112.079 bits (279), Expect = 8.332e-23
Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1

Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090
            P+ E +Y  F       ++  S    + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT
Sbjct:  270 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 352

HSP 3 Score: 107.842 bits (268), Expect = 1.639e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 3

Query:  555 MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710
            MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK
Sbjct:    1 MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 52

HSP 4 Score: 103.605 bits (257), Expect = 3.573e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391
            EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL
Sbjct:  256 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 296

HSP 5 Score: 68.9366 bits (167), Expect = 6.573e-9
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2

Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945
            + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L
Sbjct:  213 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 252

[Close]

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A067GM08_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011626mg PE=4 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 4.495e-92
Identity = 146/186 (78.49%), Postives = 167/186 (89.78%), Query Frame = 3

Query:  156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713
            MEELQ +LQ RGLT++  P+KGR L   +DFYPGEVIISQEPYVCVPNNS + SRCDGCF+ SNLKKCSAC VVWYCGS+CQKL+WKLHRLECQ+L++LDKE+RKSVTP+IR+M+KLYLRRKLQN+NVIP T  DNY+LVEALV+HMSDIDEKQLLLYAQ+ANLVNLILQ P I I EIAENFSK+
Sbjct:    1 MEELQKALQDRGLTVTGLPEKGRCLYTTKDFYPGEVIISQEPYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSVTPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQWPEISINEIAENFSKL 186

HSP 2 Score: 274.633 bits (701), Expect = 1.243e-77
Identity = 126/157 (80.25%), Postives = 142/157 (90.45%), Query Frame = 3

Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKAL 1646
            + ACNAHTIC+SELR LGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQH+PK +EV ISY+ETA ST+TRQK LKEQYLFTC C RC KLGQ+ DIQESAILEGYRC+D+GCSGFLLR+SD+KGF CQQCGL+R+KEEI+KIAS++  LS K L
Sbjct:  185 KLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTL 341

HSP 3 Score: 81.6481 bits (200), Expect = 1.130e-12
Identity = 36/52 (69.23%), Postives = 50/52 (96.15%), Query Frame = 1

Query: 2923 LGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078
            LG+T++AIKS T+AV+ILRITHGT++PFMKEL++KLEEA+ EAS+KLSS+++
Sbjct:  430 LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKLSSKDE 481

HSP 4 Score: 80.4925 bits (197), Expect = 2.855e-12
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1

Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388
            E+WKEALA C+LTIPVY+RVYP FHPLLGLQYY+CGKLEW
Sbjct:  389 EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 428

The following BLAST results are available for this feature:

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25


Match Name	E-value	Identity	Description
SMYD1_HUMAN	4.896e-9	30.10	Histone-lysine N-methyltransferase SMYD1 OS=Homo s...	[more]
SMYD1_MOUSE	5.025e-9	30.10	Histone-lysine N-methyltransferase Smyd1 OS=Mus mu...	[more]
SMYD4_PONAB	1.515e-8	35.24	SET and MYND domain-containing protein 4 OS=Pongo ...	[more]
Y2140_DICDI	2.093e-8	26.23	SET and MYND domain-containing protein DDB_G029214...	[more]
Y3591_DICDI	2.653e-8	30.25	SET and MYND domain-containing protein DDB_G027359...	[more]

Pages

BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2RI11_GOSRA	4.095e-117	98.38	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RBL7_GOSRA	4.764e-116	98.38	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2PQ85_GOSRA	1.500e-112	97.30	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2N9S9_GOSRA	1.249e-111	92.82	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0MR97_GOSAR	7.448e-110	96.76	Histone-lysine N-methyltransferase ASHR1-like prot...	[more]
A0A061FFX1_THECC	6.689e-100	86.56	SET domain protein isoform 3 OS=Theobroma cacao GN...	[more]
A0A061FH39_THECC	6.702e-100	86.56	SET domain protein isoform 1 OS=Theobroma cacao GN...	[more]
A0A061FNX5_THECC	7.412e-100	86.56	SET domain protein isoform 2 OS=Theobroma cacao GN...	[more]
A0A0D2SDG4_GOSRA	2.890e-97	98.11	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A067GM08_CITSI	4.495e-92	78.49	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 58..95 e-value: 2.8E-9 score: 36.8
IPR002893	Zinc finger, MYND-type	PROSITE	PS01360	ZF_MYND_1	coord: 58..95
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 58..95 score: 11.603
None	No IPR available	PANTHER	PTHR12197	SET AND MYND DOMAIN CONTAINING	coord: 1..187
None	No IPR available	PANTHER	PTHR12197:SF165	HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1	coord: 1..187
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 13..65
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 53..100

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.barbadense_cottongen_reftransV1_0092647 ID=g.barbadense_cottongen_reftransV1_0092647; Name=g.barbadense_cottongen_reftransV1_0092647; organism=Gossypium barbadense; type=contig; length=3428bp
GTCGTTTTTATCCAAAATTACTTTTGAAGAGCAATGAGAGTGCCGTTTTA
ATTTTTTTTTTCTTGTTTACGAAAAGATCTGACGCCGAGGATTAGTCTTT
CATTAGTCTAAAGCAAAAACCTTCCAGAGCTTACTAGTTCTGGCTTTGCT
TGTTGATGGAGGAATTACAGGCTTCTCTTCAACCTCGAGGCTTAACCCTT
TCAACTTTCCCCGATAAAGGCCGTTCCCTCCTCGCTGCCAGGGATTTCTA
TCCAGGAGAAGTGATTATAAGCCAAGAGCCATACGTCTGCGTGCCCAACA
ACTCCTTAACCGAATCAAGGTGCGATGGATGTTTCAGCAAAAGCAATCTT
AAGAAATGCTCAGCTTGTCATGTTGTTTGGTATTGTGGGAGCTCATGTCA
GAAACTGGAATGGAAGTTGCATCGGCTCGAGTGTCAGTTACTCGCTAAGC
TTGACAAAGAAAGGAGAAAATCTGTTACGCCTACCATCCGAATGATGGTG
AAACTTTACCTTAGGAGAAAGTTGCAAAATGAGAATGTCATCCCTGTTAC
AGCTATGGACAATTACAATTTGGTGGAGGCTTTGGTTTCTCACATGTCGG
ATATTGATGAGAAGCAGCTATTGTTATATGCGCAGATGGCTAACCTTGTT
AACTTGATTCTTCAGCTCCCCAACATCGACATAAAGGAGATTGCTGAAAA
CTTTTCCAAGGTCCATATTGAACGGTTTTAAGCTTCTAATTCCTTAGTTT
ATCATTTGAGTCATAATTACTTGAAACATATTAAATTTAATATGTTTTCC
TTCCTCACTCACTCCAAGAAAGAAATTAATGAAGGTTATATCTAGGTACT
ATGTAAGCAGTCTTGCATTTCTTCCATGTGATCTTTTGCTATTTTATCAT
TAAATCTTAAATTTCAAATCAACAGGAAGAATGCAAGCTTCTGTTAGGAA
CTTATGGGTTGCTTAAAACATTATGCAGAAAAGGATCAAGGTTGTATAAG
TTATGTTTCAATTAGATGGATGTTCAATCCAAAAGTAAGATTGGCCTGAA
TAAGCAGTCCCGGAATTTATTACAGTGTAATTTCATGCCTCTTTTATTGT
AACAAAGTTAGGAATCTTAACAAGTTCTGTCTAAGCTGGATGAACATATG
TTCTTATTTATTATTATGAAAATGGCAGTTTGCATGTAATGCGCATACCA
TTTGTGACAGTGAACTGAGATCGCTTGGGACAGGACTGTATCCTGTTATT
TCTATTATCAACCACAGCTGCTTGCCAAATGCTGTCTTGGTATTTGAAGG
AAGGTTGGCTGTGGTACGTGCTGTACAACATATACCCAAAGATTCTGAGG
TATCAATCAGTTATGTAGAGACTGCTGCAAGTACAATTACTCGGCAAAAG
ACTCTCAAAGAACAGTACCTTTTCACTTGTATATGTGTTCGCTGTAACAA
ACTGGGTCAGTATGGTGATATCCAAGAAAGTGCAATTCTAGAAGGCTATC
GGTGCAGGGACAACGGATGCAGTGGCTTCTTGCTTAGAGAATCAGATGAA
AAAGGATTTGTTTGCCAACAATGTGGCCTCATTAGAAACAAGGAAGAGAT
AAGAAAGATTGCTAGTGATATCAAAGCATTGTCGGACAAGGCTCTTAAGT
GTAGTTCCTCGGGCAGTATCCTTCTCTTCTTTTCTTTGTTGACTAACTAG
GCATTATTGGTGGAAATTCAATTAAATATCATTGAATATAATCTCATTGG
TGAACTAATCTCATCTGGTAATAATTTAATTCACATTCATTGAAGGAAAG
GAATGAAAGTTGATTCTTAACCTGAACTTCAGATCTTCAGGAAGCCATTG
TTTTGTATAAAAATATTGAAAAGCTCCAGAAGGAAGTGTACCATCCTTTT
TCAATCATTTTGTTGAGAACTTGGGAAAAACTTCTTGAGGTACTTCCTTG
AGTCATGTTCACATTTCTGAGCAGAATGTAGCTTGAAGAAACATAGTTTA
AAGATGATTCAATTTCATATGATGTAGCAGTAGGATTCTTATTACTAATT
CAGCTTCACATCAGTGTATATTCTTGTCTTGTTACTTCCCAATCTGATGA
ATCGCTAGATCATGTCAGAAGCTAAACTGAAAGCTAACACCTCTTGTTTC
CTCTTCTATCAAACATCCCTTGGTAAAATAACATTGGTTTTATCGGCAAT
AACAATTGTGTTGATGTGTGATTTGATACAAATTGAATCAATTAATCCTG
CAGATATTAATGCAGCTGGAAGAATGGAAAGAAGCTTTGGCAATTTGCAG
ATTGACGATTCCGGTGTATGAAAGGGTTTATCCAGGATTTCATCCTTTGC
TTGGATTACAATACTACAGTTGTGGAAAGCTTGAATGGTTAGAGAAATAT
CTTGCCCTTGTTATTGACTTCATTCTCTGGTTTACTTCTTTCTTCCACTT
GTTCATCTTAGAAAATGTTAGTCATATCCAGCACCCTATAAGCTTTATAA
AATGAACTGAGGCCATCACTTTCTATGAAGTTGTCTCTCGGGACCTTGTA
GCAGCTAAAGTACACACTTTCGTCTGCTCAACATGAATGTGAAATGCACC
AAATTTTATGACTTAACATAGCTGTGTTCATCCAGGAATATAACCAAAAA
TTCAGAACTGCATCAGATTTATCGGATTATTACTTAATAAGAACTTCAGT
ATCTTTAGCAACTTTTCTTGAACCTGGCAAAGTTTATTCCAAGGTCCTTT
AGAGGCAAATATGCATTCTTTTAGTTGTAGCTGGTAGGTTTTGAGATCTT
TAACAGGTCAATGAGTGGGCATGATCTTAAAATAACCTCTCAAAGAATCC
CTTTACAAATGGTTTGATAGTTTTACTCAGTTTTGGATTAAAAAAACTTC
GATATTTATTAATGACAGGTTGCTAGGGGAGACAGATGATGCTATCAAGT
CGTTCACCAAGGCGGTTGACATACTGCGAATCACTCATGGGACAAGTACA
CCATTTATGAAAGAACTGTTGATGAAGTTGGAGGAAGCTCGTGTTGAAGC
GTCGTTCAAGCTCTCATCAAGAGAGGACTCATAAATTACGTTGTGAATGT
TATTGGCATTGTCTTCAATGTGAAGCTTACAGGCTTGCATCAAGGAATGA
CTCAATTGTGCTCTTCCATATCCGGAAGCCAAGAGCTTGGTTTCTCTCGG
GTTCATTGGAGATTTTTCAGCTTAAATGAGAAAAGGATTATGTATCGACT
GAAAAATATCAGTATTAGCTAATGTTGTAAGAATTGGATCGGACTGTGAT
TAAACGGTGGTCTAATTGGTGTATTACACTATATGAAACCACCCACTTAG
ATAAAGACCTGTTTTCGTCTTCTTCTTTTTTCATTTTTTATTTTAAAAAT
GATAAAATTTGAGTTTTCAATACGTTAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002893	Znf_MYND

Search form

g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense

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