g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_HUMAN (Histone-lysine N-methyltransferase SMYD1 OS=Homo sapiens GN=SMYD1 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.896e-9 Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3 Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451 CN T+ D L+++G G++P + ++NH C PN ++F G V+++ H I + E+++SY++ + R++ LK+QY F C C C K Sbjct: 179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQK 281 HSP 2 Score: 60.077 bits (144), Expect = 8.642e-8 Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 3 Query: 216 KGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKL 506 KGR L A ++F+ ++I ++ Y V +SL C CF + L +C C YC +CQK W H+ EC + + K +++ R+M ++ Sbjct: 17 KGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRV 114
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_MOUSE (Histone-lysine N-methyltransferase Smyd1 OS=Mus musculus GN=Smyd1 PE=1 SV=3) HSP 1 Score: 63.929 bits (154), Expect = 5.025e-9 Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3 Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451 CN T+ D L+++G G++P + ++NH C PN ++F G V+++ H I + E+++SY++ + R++ LK+QY F C C C K Sbjct: 179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQK 281 HSP 2 Score: 63.929 bits (154), Expect = 5.432e-9 Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 3 Query: 204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNEN-VIPVTAMDNYNLVEALVSHMSDIDEKQL 620 T KGR L A ++F+ +VI ++ Y V +SL C CF + L +C C YC +CQK W H+ EC + K K +++ R+M ++ E ++ V + N+ V H + ++K+L Sbjct: 13 TSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNH------VEHFGEEEQKEL 147
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD4_PONAB (SET and MYND domain-containing protein 4 OS=Pongo abelii GN=SMYD4 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.515e-8 Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 3 Query: 1176 QFACNA-------HT------ICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISY--VETAASTITRQKTLKEQYLFTCICVRC 1445 Q CNA HT + DS L TG++PV+S++NHSC PN + F +A ++A Q I K E+ Y ++ RQ+ L+ QY F C C C Sbjct: 498 QLQCNAQAMTTIQHTGSKGSIVTDSRQVRLATGIFPVVSLLNHSCSPNTSMSFISTVATIQASQRIRKGQEILHCYGPHKSRMGVAERQQELRSQYFFDCACPAC 602
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y2140_DICDI (SET and MYND domain-containing protein DDB_G0292140 OS=Dictyostelium discoideum GN=DDB_G0292140 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.093e-8 Identity = 48/183 (26.23%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKK---------CSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLR---RKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKVH 716 + P GR L+A +D VI+ PY +++ +S C CF + L + C C V YC ++C+ +++ HR ECQ+ +LD E +P + +KL +R RK +++ +D ++D K+ Y Q N +LI Q + + AE S V Sbjct: 128 SHPINGRYLVATKDLDEQTVILRDLPYTWAVDHATCDSVCQHCFLEVPLNQQILPTDFYMCEGCQRVGYCSANCRCIDYSQHRFECQIFKELDTEE---YSPFLMSEIKLLVRTLSRKWLEDSITQTAGID-----------INDETIKKQNTYNQYKNPQSLIPQDNGLRYNDYAELVSNVE 296
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y3591_DICDI (SET and MYND domain-containing protein DDB_G0273591 OS=Dictyostelium discoideum GN=DDB_G0273591 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.653e-8 Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 3 Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN--KLGQYGDIQES--AILEGYRCRDNGCSGF 1529 CN I + +G + P S NHSC+PN V +G +++ I K +++ISY+ ST R+ LK Y F C C RCN + G +++S + + C C+G Sbjct: 251 CNQFGIWTKNDKCIGMAVSPSSSYFNHSCIPNCESVRDGSDMTFKSLFPIKKGDQINISYLALDKSTKRRRDYLKFGYYFHCQCPRCNSTDIDPTGKLEDSLDNWISKFYCHQKKCTGL 369
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V4M3A4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022664mg PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 6.734e-80 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 M +LQ L R LT+ P KGRSL ARDF PGEVI+SQEPY+CVPNN ESRCDGCF +NLKKCS C VVWYCGSSCQK EWKLHR EC L++L+KE+R VTPTIR+M+KLY++R LQN+ V+P+T DNY+LVEA+VSHMS++DEKQL+LYAQMANLVNL+LQLP+ID+KEIAENFSK Sbjct: 1 MADLQKFLGDRCLTVLNIPGKGRSLFTARDFRPGEVILSQEPYICVPNN---ESRCDGCFKTNNLKKCSGCQVVWYCGSSCQKSEWKLHRHECIALSRLEKEKRMLVTPTIRLMLKLYIKRNLQNDKVMPITTTDNYSLVEAMVSHMSELDEKQLMLYAQMANLVNLVLQLPSIDLKEIAENFSK 182 HSP 2 Score: 233.417 bits (594), Expect = 4.821e-63 Identity = 103/156 (66.03%), Postives = 135/156 (86.54%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +F+CNAH+ICDSELR G GL+P++SIINHSC PNA+LVFE ++AVVRA+++I KDSEV+ISY+ETA ST+TRQK+LKEQYLF C C C+ +G+ DI+ESAILEGYRC + C+GFLLR+ DEKGFVCQ+C L+R+KEE++K+A D+K +S+KA Sbjct: 182 KFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAILVFEEQMAVVRAMENISKDSEVTISYIETAGSTLTRQKSLKEQYLFHCECAGCSNIGKPHDIEESAILEGYRCANETCTGFLLRDPDEKGFVCQKCKLLRSKEEVKKLAGDVKTVSEKA 337 HSP 3 Score: 73.559 bits (179), Expect = 4.669e-10 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 E W+E L CRL +PVY+R+YP HPL+GLQ+Y+ GKLEWL Sbjct: 386 ESWREVLNYCRLIVPVYQRIYPATHPLIGLQFYTQGKLEWL 426 HSP 4 Score: 71.2478 bits (173), Expect = 2.563e-9 Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS 3081 + LLGET++A++S KA +ILRI+HGTST FMKEL KL+EAR EAS+KL + +D+ Sbjct: 424 EWLLGETEEAVRSLAKAFEILRISHGTSTHFMKELSEKLDEARAEASYKLLALKDA 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A059BA85_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00611 PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 7.223e-80 Identity = 131/187 (70.05%), Postives = 163/187 (87.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+L+A+L+ R LT+++ P+KGRSLLAA DF+ G+VI+SQEPYV PN + E RCDGCF+ S L+KCSAC VWYCGSSCQK EWK+HRLEC LA+LDKE+RKSVTP+IR+M+KLY+RRKLQ+E +I TAMDNY+LV+ALVSHMS+IDEKQL+LYAQMANL+N+ILQ P I+IKE+AENFSK+ Sbjct: 1 MEDLKAALRDRCLTVASLPEKGRSLLAATDFHQGQVILSQEPYVFAPNAA--EPRCDGCFATSARLRKCSACQAVWYCGSSCQKSEWKMHRLECMALARLDKEKRKSVTPSIRLMIKLYIRRKLQDEKIISTTAMDNYSLVDALVSHMSEIDEKQLVLYAQMANLINIILQWPEINIKEVAENFSKL 185 HSP 2 Score: 253.062 bits (645), Expect = 4.357e-70 Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDK 1640 + +CNAHTICDSELR LGTGLYPVISIINHSCLPNAVL+FEGR AVVRAVQHIP+ SEV ISY+ETA ST TR K+L+EQY F C C RC KLGQ DI+ESAILEGYRC D+ CSGFLLR+S+++GFVCQQCG +RNKEEIR IAS+IK +S++ Sbjct: 184 KLSCNAHTICDSELRPLGTGLYPVISIINHSCLPNAVLLFEGRTAVVRAVQHIPQGSEVLISYIETAGSTTTRLKSLREQYHFACACPRCAKLGQPDDIKESAILEGYRCEDDRCSGFLLRDSEKQGFVCQQCGRVRNKEEIRDIASEIKLMSER 338 HSP 3 Score: 79.7221 bits (195), Expect = 4.310e-12 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWLEKYLALVIDFILWFTSFFHLF 2454 E+WKEAL C+LTIPVYERVYPG+HPLLGLQYY+ GKLEWL L ++ I T + Sbjct: 387 EDWKEALVYCKLTIPVYERVYPGYHPLLGLQYYTSGKLEWL---LGDTVNAIKSLTKAIDIL 445 HSP 4 Score: 73.1738 bits (178), Expect = 6.235e-10 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 LLG+T +AIKS TKA+DILR+THG +T F++EL+MKLEEAR EAS LS ++ Sbjct: 427 LLGDTVNAIKSLTKAIDILRVTHGMNTEFVRELVMKLEEARAEASHNLSCADE 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V7AUN6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G121500g PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.432e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNS--LTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSPLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPEINIKEIAENFSK 188 HSP 2 Score: 237.269 bits (604), Expect = 1.733e-64 Identity = 109/156 (69.87%), Postives = 130/156 (83.33%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSELR +GTGLYPVISIINHSCLPN+VLVFEGR A+VRAV+HIP +EV ISY+ETA ST+TRQK LKEQYLFTC C RC+KLGQ D QESAILEGYRC+ + C GFLL +D KGF CQ C L+ KEE+++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVEHIPIGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKLGQNDDTQESAILEGYRCKSDKCGGFLLHTTDGKGFQCQGCQLVMGKEEVKETITEIELLSEEA 343 HSP 3 Score: 83.5741 bits (205), Expect = 2.959e-13 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 2923 LGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSS 3069 LGE ++ +KS TKAVDILRITHGT+TPFMK+LLMKLEEAR EAS+K SS Sbjct: 434 LGEIEEGVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKFSS 482 HSP 4 Score: 82.0333 bits (201), Expect = 8.833e-13 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 393 EHWTEALAYCKLTIPFYEKVYPSIHPLLGLQYYTCGKLEW 432
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: U5U2I4_PHAVU (Histone-lysine N-methyltransferase ASHR1-like protein OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.628e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSL--TESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSSLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPGINIKEIAENFSK 188 HSP 2 Score: 80.4925 bits (197), Expect = 3.033e-12 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 394 EHWTEALAYCKLTIPFYEKVYPFIHPLLGLQYYTCGKLEW 433 HSP 3 Score: 80.1073 bits (196), Expect = 3.805e-12 Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 + LGE ++ +KS TKAVDILRITHGT+TPFMK+ LMKLEEAR EA +K SS E Sbjct: 432 EWYLGEIEEGVKSLTKAVDILRITHGTNTPFMKDFLMKLEEARAEAFYKFSSVEQ 486 HSP 4 Score: 75.8702 bits (185), Expect = 8.159e-11 Identity = 49/157 (31.21%), Postives = 65/157 (41.40%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESA-ILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSEL K+ YL TC C +K + D QESA +GYRC+ C GFLL ++D KGF CQ C L+ K EI++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKQLYLSTCKCPWGSKESECNDTQESANFKKGYRCKSEKCGGFLLHKTDGKGFQCQGCQLVMGKGEIKETITEIELLSEEA 344
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A072V0H4_MEDTR (Histone-lysine N-methyltransferase OS=Medicago truncatula GN=MTR_3g073000 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.695e-79 Identity = 131/185 (70.81%), Postives = 154/185 (83.24%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQ +L+ LT+ST +KGRSL RDF+PG+VIISQEPYVCVP T+ RCDGCFS +NL KCS C VVWYCG+ CQK EWKLHRLECQ L++LD +RKSVTP+IR+M+KLYLRRKLQ++ +IP TAMDNY LVEALV+HMSDI E+QL+LYAQMANLV+LILQ P I+IKEIA FSK Sbjct: 1 MEELQQALKNCNLTVSTISEKGRSLFTTRDFHPGDVIISQEPYVCVP----TQKRCDGCFSTTNLSKCSRCQVVWYCGTPCQKSEWKLHRLECQALSRLDSNKRKSVTPSIRLMLKLYLRRKLQDQKIIPSTAMDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIANFFSK 181 HSP 2 Score: 245.358 bits (625), Expect = 2.461e-68 Identity = 109/158 (68.99%), Postives = 137/158 (86.71%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 +FACNAHT+CDSELR LGTGLYPV+SIINHSCLPN+VLVF+GR A VRA+QHIPK +EV ISY+ETA ST+TRQK L+EQYLF C+C C+K+GQY D++E+AILEGYRC++ C GFLLR +D K F CQ+CGL+R+KEEI++IA++IK L ++A K Sbjct: 181 KFACNAHTVCDSELRPLGTGLYPVVSIINHSCLPNSVLVFDGREASVRALQHIPKGTEVLISYIETAGSTVTRQKALREQYLFQCVCPLCSKVGQYEDVRENAILEGYRCKNETCDGFLLRTTDGKAFQCQECGLVRDKEEIKQIATEIKFLLEEASK 338 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092647 ID=g.barbadense_cottongen_reftransV1_0092647; Name=g.barbadense_cottongen_reftransV1_0092647; organism=Gossypium barbadense; type=contig; length=3428bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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