g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_HUMAN (Histone-lysine N-methyltransferase SMYD1 OS=Homo sapiens GN=SMYD1 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.896e-9 Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3 Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451 CN T+ D L+++G G++P + ++NH C PN ++F G V+++ H I + E+++SY++ + R++ LK+QY F C C C K Sbjct: 179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLNVSEERKRQLKKQYYFDCTCEHCQK 281 HSP 2 Score: 60.077 bits (144), Expect = 8.642e-8 Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 3 Query: 216 KGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKL 506 KGR L A ++F+ ++I ++ Y V +SL C CF + L +C C YC +CQK W H+ EC + + K +++ R+M ++ Sbjct: 17 KGRGLKATKEFWAADIIFAERAYSAVVFDSLVNFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECSAIKRYGKVPNENIRLAARIMWRV 114
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD1_MOUSE (Histone-lysine N-methyltransferase Smyd1 OS=Mus musculus GN=Smyd1 PE=1 SV=3) HSP 1 Score: 63.929 bits (154), Expect = 5.025e-9 Identity = 31/103 (30.10%), Postives = 55/103 (53.40%), Query Frame = 3 Query: 1185 CNAHTICDSE-LRSLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQH------------IPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNK 1451 CN T+ D L+++G G++P + ++NH C PN ++F G V+++ H I + E+++SY++ + R++ LK+QY F C C C K Sbjct: 179 CNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQK 281 HSP 2 Score: 63.929 bits (154), Expect = 5.432e-9 Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 3 Query: 204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNEN-VIPVTAMDNYNLVEALVSHMSDIDEKQL 620 T KGR L A ++F+ +VI ++ Y V +SL C CF + L +C C YC +CQK W H+ EC + K K +++ R+M ++ E ++ V + N+ V H + ++K+L Sbjct: 13 TSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNH------VEHFGEEEQKEL 147
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD4_PONAB (SET and MYND domain-containing protein 4 OS=Pongo abelii GN=SMYD4 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.515e-8 Identity = 37/105 (35.24%), Postives = 52/105 (49.52%), Query Frame = 3 Query: 1176 QFACNA-------HT------ICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISY--VETAASTITRQKTLKEQYLFTCICVRC 1445 Q CNA HT + DS L TG++PV+S++NHSC PN + F +A ++A Q I K E+ Y ++ RQ+ L+ QY F C C C Sbjct: 498 QLQCNAQAMTTIQHTGSKGSIVTDSRQVRLATGIFPVVSLLNHSCSPNTSMSFISTVATIQASQRIRKGQEILHCYGPHKSRMGVAERQQELRSQYFFDCACPAC 602
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y2140_DICDI (SET and MYND domain-containing protein DDB_G0292140 OS=Dictyostelium discoideum GN=DDB_G0292140 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.093e-8 Identity = 48/183 (26.23%), Postives = 80/183 (43.72%), Query Frame = 3 Query: 204 TFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKK---------CSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLR---RKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKVH 716 + P GR L+A +D VI+ PY +++ +S C CF + L + C C V YC ++C+ +++ HR ECQ+ +LD E +P + +KL +R RK +++ +D ++D K+ Y Q N +LI Q + + AE S V Sbjct: 128 SHPINGRYLVATKDLDEQTVILRDLPYTWAVDHATCDSVCQHCFLEVPLNQQILPTDFYMCEGCQRVGYCSANCRCIDYSQHRFECQIFKELDTEE---YSPFLMSEIKLLVRTLSRKWLEDSITQTAGID-----------INDETIKKQNTYNQYKNPQSLIPQDNGLRYNDYAELVSNVE 296
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y3591_DICDI (SET and MYND domain-containing protein DDB_G0273591 OS=Dictyostelium discoideum GN=DDB_G0273591 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.653e-8 Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 3 Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN--KLGQYGDIQES--AILEGYRCRDNGCSGF 1529 CN I + +G + P S NHSC+PN V +G +++ I K +++ISY+ ST R+ LK Y F C C RCN + G +++S + + C C+G Sbjct: 251 CNQFGIWTKNDKCIGMAVSPSSSYFNHSCIPNCESVRDGSDMTFKSLFPIKKGDQINISYLALDKSTKRRRDYLKFGYYFHCQCPRCNSTDIDPTGKLEDSLDNWISKFYCHQKKCTGL 369
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2RI11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 4.095e-117 Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK Sbjct: 1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 185 HSP 2 Score: 327.405 bits (838), Expect = 2.903e-97 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652 +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC Sbjct: 185 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 343 HSP 3 Score: 69.3218 bits (168), Expect = 7.680e-9 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L Sbjct: 346 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 385
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2RBL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 4.764e-116 Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK Sbjct: 1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 185 HSP 2 Score: 327.02 bits (837), Expect = 2.863e-96 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652 +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC Sbjct: 185 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 343 HSP 3 Score: 111.694 bits (278), Expect = 2.498e-22 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090 P+ E +Y F ++ S + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT Sbjct: 403 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 485 HSP 4 Score: 102.834 bits (255), Expect = 1.694e-19 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 389 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429 HSP 5 Score: 68.9366 bits (167), Expect = 1.198e-8 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L Sbjct: 346 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 385
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2PQ85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 1.500e-112 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYP VIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK Sbjct: 1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYP--VIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 183 HSP 2 Score: 327.405 bits (838), Expect = 2.186e-96 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652 +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC Sbjct: 183 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 341 HSP 3 Score: 111.694 bits (278), Expect = 2.658e-22 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090 P+ E +Y F ++ S + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT Sbjct: 401 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 483 HSP 4 Score: 102.834 bits (255), Expect = 1.661e-19 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 387 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 427 HSP 5 Score: 68.9366 bits (167), Expect = 1.151e-8 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L Sbjct: 344 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 383
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2N9S9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.249e-111 Identity = 181/195 (92.82%), Postives = 183/195 (93.85%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVS----------HMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQ+PYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHR ECQLLAKLDKERRKSVTPTIRM+VKLYLRRKLQNENVIPVTAMDNYNLVEALVS MSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK Sbjct: 1 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQDPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRFECQLLAKLDKERRKSVTPTIRMIVKLYLRRKLQNENVIPVTAMDNYNLVEALVSPILFSLKLEKDMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 195 HSP 2 Score: 327.405 bits (838), Expect = 2.968e-96 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652 +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC Sbjct: 195 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 353 HSP 3 Score: 111.694 bits (278), Expect = 2.983e-22 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090 P+ E +Y F ++ S + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT Sbjct: 413 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 495 HSP 4 Score: 103.219 bits (256), Expect = 1.746e-19 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 399 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 439 HSP 5 Score: 68.9366 bits (167), Expect = 1.306e-8 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L Sbjct: 356 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 395
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0B0MR97_GOSAR (Histone-lysine N-methyltransferase ASHR1-like protein OS=Gossypium arboreum GN=F383_24011 PE=4 SV=1) HSP 1 Score: 363.614 bits (932), Expect = 7.448e-110 Identity = 179/185 (96.76%), Postives = 179/185 (96.76%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQASLQPRGLTLSTF DKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQN NVIPVTAMDNYNLVEAL MSDIDEKQLLLYAQMANLVNLILQLPN DIKEIAENFSK Sbjct: 1 MEELQASLQPRGLTLSTFHDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNGNVIPVTAMDNYNLVEAL-KDMSDIDEKQLLLYAQMANLVNLILQLPNNDIKEIAENFSK 184 HSP 2 Score: 318.546 bits (815), Expect = 2.836e-93 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSELR LGTGLYPVISIINHSCLPNAVL+FEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA Sbjct: 184 KFACNAHTICDSELRPLGTGLYPVISIINHSCLPNAVLIFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 339 HSP 3 Score: 104.375 bits (259), Expect = 5.673e-20 Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = 1 Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS 3081 P+ E +Y F ++ S + LLGETDDAIK FTKAVDILRITHGTSTPFMKELLMKLEEAR EA FKLSSREDS Sbjct: 399 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKLFTKAVDILRITHGTSTPFMKELLMKLEEARAEALFKLSSREDS 478 HSP 4 Score: 100.908 bits (250), Expect = 8.685e-19 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEAL ICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 385 EEWKEALTICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 425 HSP 5 Score: 72.4034 bits (176), Expect = 9.355e-10 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEVYHPFSIILLRT EKLLE+L Sbjct: 342 SGNLQEAIVLYKNIEKLQKEVYHPFSIILLRTREKLLEIL 381
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FFX1_THECC (SET domain protein isoform 3 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 6.689e-100 Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+LQASLQ RGL++S PDKGRSL+ +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL P+IDIKEIAENFSK+ Sbjct: 1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186 HSP 2 Score: 280.796 bits (717), Expect = 1.060e-79 Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K Sbjct: 185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342 HSP 3 Score: 93.5893 bits (231), Expect = 2.156e-16 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075 LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E Sbjct: 430 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 481 HSP 4 Score: 88.9669 bits (219), Expect = 5.832e-15 Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEAL CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 389 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429 HSP 5 Score: 63.5438 bits (153), Expect = 5.750e-7 Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 2 Query: 1820 T*TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 T + + Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L Sbjct: 344 TSSGNPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 385
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FH39_THECC (SET domain protein isoform 1 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 6.702e-100 Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+LQASLQ RGL++S PDKGRSL+ +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL P+IDIKEIAENFSK+ Sbjct: 1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186 HSP 2 Score: 280.796 bits (717), Expect = 9.296e-80 Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K Sbjct: 185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342 HSP 3 Score: 93.2041 bits (230), Expect = 2.202e-16 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075 LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E Sbjct: 428 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 479 HSP 4 Score: 88.9669 bits (219), Expect = 5.614e-15 Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEAL CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 388 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 428 HSP 5 Score: 67.0106 bits (162), Expect = 5.322e-8 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 +SD Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L Sbjct: 345 SSDPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 384
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A061FNX5_THECC (SET domain protein isoform 2 OS=Theobroma cacao GN=TCM_035036 PE=4 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 7.412e-100 Identity = 161/186 (86.56%), Postives = 172/186 (92.47%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+LQASLQ RGL++S PDKGRSL+ +DFYPGEVIISQEPYV VPNNSLTES CDGCFSKSNLKKCSAC VVWYCGS+CQKLEWKLHRLECQ LAKLDKERRKSVTPTIRMMVKLYLRRKLQ+E VIPVTA+DNYNLVE LVSHM DIDEKQL+LYAQMANLVNLIL P+IDIKEIAENFSK+ Sbjct: 1 MEQLQASLQARGLSVSNLPDKGRSLVTTKDFYPGEVIISQEPYVFVPNNSLTESSCDGCFSKSNLKKCSACQVVWYCGSTCQKLEWKLHRLECQALAKLDKERRKSVTPTIRMMVKLYLRRKLQSERVIPVTAIDNYNLVEQLVSHMLDIDEKQLVLYAQMANLVNLILGCPDIDIKEIAENFSKI 186 HSP 2 Score: 280.411 bits (716), Expect = 1.126e-79 Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 + ACNAHTICDSELR LGTGLYPVISIINHSCLPN+VLVFEGRLAVVRAVQHIPKD+E+ ISY+ETA STITRQKTLKEQYLFTC C C K+GQ+ DIQESAILEGYRCRDN CSGFLLRESD+KGFVCQQCGL RNKEEIRK + DIKAL DKA K Sbjct: 185 KIACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRLAVVRAVQHIPKDAEILISYIETATSTITRQKTLKEQYLFTCTCPCCIKVGQHDDIQESAILEGYRCRDNRCSGFLLRESDDKGFVCQQCGLTRNKEEIRKKSRDIKALLDKAPK 342 HSP 3 Score: 93.2041 bits (230), Expect = 2.198e-16 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRE 3075 LLGETDDAIKS TKAVDILRITHGT+TPFMKELLMKLEEAR EAS+ LS +E Sbjct: 429 LLGETDDAIKSLTKAVDILRITHGTNTPFMKELLMKLEEARAEASYTLSCKE 480 HSP 4 Score: 88.9669 bits (219), Expect = 5.799e-15 Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEAL CRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 389 EEWKEALTFCRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 429 HSP 5 Score: 63.5438 bits (153), Expect = 5.687e-7 Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 2 Query: 1820 T*TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 T + + Q+A++LYKNIEKLQKEV HPFSI L+RTWEKL E+L Sbjct: 344 TSSGNPQDAMILYKNIEKLQKEVCHPFSISLMRTWEKLHEIL 385
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A0D2SDG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G091200 PE=4 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.890e-97 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 1652 +FACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTC CVRCNKLGQY DIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC Sbjct: 52 KFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCTCVRCNKLGQYDDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALKC 210 HSP 2 Score: 112.079 bits (279), Expect = 8.332e-23 Identity = 60/85 (70.59%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 2836 PLKESLYKWFDSFTQFWIKKTSIFINDRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS*IT 3090 P+ E +Y F ++ S + LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEAR EASFKLSSREDS IT Sbjct: 270 PVYERVYPGFHPL--LGLQYYSCGKLEWLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARAEASFKLSSREDSYIT 352 HSP 3 Score: 107.842 bits (268), Expect = 1.639e-21 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 3 Query: 555 MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK Sbjct: 1 MDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 52 HSP 4 Score: 103.605 bits (257), Expect = 3.573e-20 Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL Sbjct: 256 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 296 HSP 5 Score: 68.9366 bits (167), Expect = 6.573e-9 Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 2 Query: 1826 TSDLQEAIVLYKNIEKLQKEVYHPFSIILLRTWEKLLEVL 1945 + +LQEAIVLYKNIEKLQKEV HPFSIIL+RT EKLLE+L Sbjct: 213 SGNLQEAIVLYKNIEKLQKEVCHPFSIILMRTREKLLEIL 252
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A067GM08_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011626mg PE=4 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 4.495e-92 Identity = 146/186 (78.49%), Postives = 167/186 (89.78%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 MEELQ +LQ RGLT++ P+KGR L +DFYPGEVIISQEPYVCVPNNS + SRCDGCF+ SNLKKCSAC VVWYCGS+CQKL+WKLHRLECQ+L++LDKE+RKSVTP+IR+M+KLYLRRKLQN+NVIP T DNY+LVEALV+HMSDIDEKQLLLYAQ+ANLVNLILQ P I I EIAENFSK+ Sbjct: 1 MEELQKALQDRGLTVTGLPEKGRCLYTTKDFYPGEVIISQEPYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSVTPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQWPEISINEIAENFSKL 186 HSP 2 Score: 274.633 bits (701), Expect = 1.243e-77 Identity = 126/157 (80.25%), Postives = 142/157 (90.45%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKAL 1646 + ACNAHTIC+SELR LGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQH+PK +EV ISY+ETA ST+TRQK LKEQYLFTC C RC KLGQ+ DIQESAILEGYRC+D+GCSGFLLR+SD+KGF CQQCGL+R+KEEI+KIAS++ LS K L Sbjct: 185 KLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTL 341 HSP 3 Score: 81.6481 bits (200), Expect = 1.130e-12 Identity = 36/52 (69.23%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 2923 LGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 LG+T++AIKS T+AV+ILRITHGT++PFMKEL++KLEEA+ EAS+KLSS+++ Sbjct: 430 LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKLSSKDE 481 HSP 4 Score: 80.4925 bits (197), Expect = 2.855e-12 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E+WKEALA C+LTIPVY+RVYP FHPLLGLQYY+CGKLEW Sbjct: 389 EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 428 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092647 ID=g.barbadense_cottongen_reftransV1_0092647; Name=g.barbadense_cottongen_reftransV1_0092647; organism=Gossypium barbadense; type=contig; length=3428bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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