g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_PIG (N-lysine methyltransferase SMYD2 OS=Sus scrofa GN=SMYD2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.702e-16 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRC 1445 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAVQ I EV SY++ T R L++ Y FTC C C Sbjct: 178 QVNCNGFTIEDEELSHLGSXIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQEC 267 HSP 2 Score: 69.707 bits (169), Expect = 6.207e-11 Identity = 49/169 (28.99%), Postives = 81/169 (47.93%), Query Frame = 3 Query: 189 GLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLI---LQLPNID 680 GL P KGR L A + F G+++ S Y V + + C+ CF+ K L KC C +YC CQK +W +H+LEC + + S T+R+ ++ ++K+ E T + V+ SH+ +D EK+ L+ + +A L + L+ P+ D Sbjct: 8 GLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEFCFARKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPS--ETVRLTARILAKQKIHPER----TPSEKLLAVKEFESHLDKLDNEKRDLIQSDIAALHHFYSKHLEFPDSD 170
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMY2A_DANRE (N-lysine methyltransferase SMYD2-A OS=Danio rerio GN=smyd2a PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.034e-15 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRC 1445 Q CN TI D EL LG+ L+P ++++NHSC PN ++ ++G +A VRAVQ I + E+ SY++ T R + LK+ Y F C C C Sbjct: 178 QVNCNGFTIEDEELSHLGSALFPDVALMNHSCSPNVIVTYKGTVAEVRAVQEINPEEEIFNSYIDLLYPTEDRIERLKDSYFFNCDCKEC 267 HSP 2 Score: 65.0846 bits (157), Expect = 1.732e-9 Identity = 39/137 (28.47%), Postives = 68/137 (49.64%), Query Frame = 3 Query: 210 PDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQ 617 P KGR L A + F G+++ + Y V + RC+ CF+ K L KC C +YC CQ+ +W +H+LEC + + S T+R++ ++ L++K Q E T + + L +H+ +D ++ Sbjct: 15 PGKGRGLKAIKHFKVGDLVFACPAYAYVLTVNERGGRCECCFTRKEGLSKCGKCKQAYYCNVECQRGDWPMHKLECSAMCAYGENWCPS--ETVRLVARIILKQKHQTER----TPSERVLTLRELEAHLDKLDNEK 145
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: MSTAA_DROME (Protein msta, isoform A OS=Drosophila melanogaster GN=msta PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 6.872e-15 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 1221 SLGTGLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLL 1535 +L GL+P+ +I+NH C PNA FE GRLAVVRA + IPK E++ +Y + +TR LK F C CVRC + + + L CR+ GC G ++ Sbjct: 238 TLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRC-----HDNTENGTYLSALFCREQGCRGLVI 338
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMY2B_DANRE (N-lysine methyltransferase SMYD2-B OS=Danio rerio GN=smyd2b PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.318e-14 Identity = 56/185 (30.27%), Postives = 88/185 (47.57%), Query Frame = 3 Query: 189 GLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLI---LQLPNIDIKEIAENFSKVHIERF 728 G+ P KGR L +R + GE++ S Y V + C+ CF+ K L KC C +YC ++CQK W +H+LECQ + + R S T+R++ ++ R K Q E + L+ + +H+ D+D EK+ + A +A L L P D + + FS+VH F Sbjct: 9 GIEQFASPGKGRGLRVSRAYGVGELLFSCPAYSYVLSVGERGLICEQCFTRKKGLAKCGKCKKAFYCNANCQKKNWPMHKLECQAMCAFGENWRPS--ETVRLVARIIARLKAQKERSPSEILL----LLGEMEAHLEDMDNEKREMTEAHIAGLHQFYSKHLDFP--DHQALLTLFSQVHCNGF 185 HSP 2 Score: 78.5666 bits (192), Expect = 9.919e-14 Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 Q CN T+ D EL +LG ++P I+++NHSC PN ++ + G A VRAV+ I E+ SY++ T R + L++ Y F+C C C Sbjct: 179 QVHCNGFTVEDEELSNLGLAIFPDIALLNHSCSPNVIVTYRGINAEVRAVKDISPGQEIYTSYIDLLYPTADRLERLRDMYYFSCDCKECT 269
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y7331_DICDI (SET and MYND domain-containing protein DDB_G0277331 OS=Dictyostelium discoideum GN=DDB_G0277331 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.125e-11 Identity = 36/115 (31.30%), Postives = 64/115 (55.65%), Query Frame = 3 Query: 213 DKGRSLLAARDFYPGEVIISQEPYV-CVPNNSLTESRCDGCFSKS-------NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKL--DKERRKSVTPTIRMMVKLYLRRKLQ 527 +KG + + R F GE I+ EPYV V +++ CD C LK+CS C +V+YC + CQ WK+H+ EC++L+ + +++ T + M+++L+++R L+ Sbjct: 37 EKGMGIFSNRKFNKGEKIMKIEPYVWSVAKHAIV---CDECLKNKLDLEEGKTLKRCSNCKLVYYCSTDCQTKAWKIHKQECKILSTIPSTTDKKNINTKSTTMLLRLFIKRNLE 148
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD4_MOUSE (SET and MYND domain-containing protein 4 OS=Mus musculus GN=Smyd4 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.681e-10 Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 3 Query: 1188 NAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISY--VETAASTITRQKTLKEQYLFTCICVRCN 1448 N I +S L TG++PV+S++NHSC PN + F G +A VRA Q I K E+ Y E+ RQ+ L QY F C C C+ Sbjct: 511 NESIITNSRQIRLATGIFPVVSLLNHSCRPNTSVSFTGTVATVRAAQRIAKGQEILHCYGPHESRMGVAERQQRLSSQYFFDCRCGACH 599
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: MSTAB_DROME (Protein msta, isoform B OS=Drosophila melanogaster GN=msta PE=3 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.882e-10 Identity = 36/102 (35.29%), Postives = 52/102 (50.98%), Query Frame = 3 Query: 1233 GLYPVISIINHSCLPNAVLVFE-GRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLL 1535 L+P+ ++NH C PNA FE G VV A + IP +E+++SY + ST+ R+ L F C CVRC + G L CR+ GC G ++ Sbjct: 228 ALFPLAGLLNHQCTPNAAHHFENGETIVVCATERIPAGAEITMSYAKLLWSTLARKIFLGMTKHFICKCVRCQDPTENG-----TYLSALFCREQGCRGLVI 324
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: Y3589_DICDI (SET and MYND domain-containing protein DDB_G0273589 OS=Dictyostelium discoideum GN=DDB_G0273589 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.005e-9 Identity = 37/115 (32.17%), Postives = 54/115 (46.96%), Query Frame = 3 Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGF 1529 CN I + +G + P S NHSC+PN V +G +++ I K +++ISY+E R+ LK Y F CIC RCN D ++ I + Y C C+G Sbjct: 234 CNQFGIWTKNDKCIGVAVSPSSSYFNHSCIPNCTDVRDGSNMTFKSLYPIKKGDQLTISYIELDQPIQDRKDELKYGYYFDCICPRCNGDSNSIDSMDNWISKFY-CSQKKCTGL 347
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SET6_SCHPO (SET domain and MYND-type zinc finger protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set6 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.184e-9 Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRC 1445 + A NA + S SLG L ++ +NHSC PN ++F+G + + + + I KD ++ ISY++ RQK L ++Y F+C C RC Sbjct: 165 RLAVNAMNLVTSSFDSLGMCLDTILCRLNHSCDPNCQIIFDGAIVQLVSKRDIKKDEQLFISYIDIRLPKSIRQKQLLKKYFFSCYCPRC 254 HSP 2 Score: 60.8474 bits (146), Expect = 5.073e-8 Identity = 41/167 (24.55%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 207 FPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTI-RMMVKLYLRRKL-----------QNENVIPVTAMDNYNLVEALVSHMSDIDEKQLL--LYAQMA-NLVNLI 659 P+ G+ +A + G++II + + +++ C C K ++C+AC ++ YC CQK +W H+LEC+ L ++ + P++ R++++LYL + QNE ++ + L+ + SH + I + +L L+ ++A N +NL+ Sbjct: 11 LPEFGKGTVATDNIPIGKIIIRKRVDILSLDSANLTRTCSTCTEEKVKTQRCAACKIIHYCSKGCQKADWPFHKLECK---ALQASKQNGILPSVCRLLIRLYLLWQKNPAIIEPMEGHQNEFQAVSSSWSDAELIASAASHYTQIYQAELFQKLFCRLAVNAMNLV 174
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD4_HUMAN (SET and MYND domain-containing protein 4 OS=Homo sapiens GN=SMYD4 PE=2 SV=3) HSP 1 Score: 64.6994 bits (156), Expect = 4.013e-9 Identity = 39/105 (37.14%), Postives = 52/105 (49.52%), Query Frame = 3 Query: 1176 QFACNA-------HT------ICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISY--VETAASTITRQKTLKEQYLFTCICVRC 1445 Q CNA HT + DS L TG++PVIS++NHSC PN + F +A +RA Q I K E+ Y ++ RQ+ L+ QY F C C C Sbjct: 498 QLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNTSVSFISTVATIRASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPAC 602
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V4M3A4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022664mg PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 6.734e-80 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 M +LQ L R LT+ P KGRSL ARDF PGEVI+SQEPY+CVPNN ESRCDGCF +NLKKCS C VVWYCGSSCQK EWKLHR EC L++L+KE+R VTPTIR+M+KLY++R LQN+ V+P+T DNY+LVEA+VSHMS++DEKQL+LYAQMANLVNL+LQLP+ID+KEIAENFSK Sbjct: 1 MADLQKFLGDRCLTVLNIPGKGRSLFTARDFRPGEVILSQEPYICVPNN---ESRCDGCFKTNNLKKCSGCQVVWYCGSSCQKSEWKLHRHECIALSRLEKEKRMLVTPTIRLMLKLYIKRNLQNDKVMPITTTDNYSLVEAMVSHMSELDEKQLMLYAQMANLVNLVLQLPSIDLKEIAENFSK 182 HSP 2 Score: 233.417 bits (594), Expect = 4.821e-63 Identity = 103/156 (66.03%), Postives = 135/156 (86.54%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +F+CNAH+ICDSELR G GL+P++SIINHSC PNA+LVFE ++AVVRA+++I KDSEV+ISY+ETA ST+TRQK+LKEQYLF C C C+ +G+ DI+ESAILEGYRC + C+GFLLR+ DEKGFVCQ+C L+R+KEE++K+A D+K +S+KA Sbjct: 182 KFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAILVFEEQMAVVRAMENISKDSEVTISYIETAGSTLTRQKSLKEQYLFHCECAGCSNIGKPHDIEESAILEGYRCANETCTGFLLRDPDEKGFVCQKCKLLRSKEEVKKLAGDVKTVSEKA 337 HSP 3 Score: 73.559 bits (179), Expect = 4.669e-10 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 E W+E L CRL +PVY+R+YP HPL+GLQ+Y+ GKLEWL Sbjct: 386 ESWREVLNYCRLIVPVYQRIYPATHPLIGLQFYTQGKLEWL 426 HSP 4 Score: 71.2478 bits (173), Expect = 2.563e-9 Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS 3081 + LLGET++A++S KA +ILRI+HGTST FMKEL KL+EAR EAS+KL + +D+ Sbjct: 424 EWLLGETEEAVRSLAKAFEILRISHGTSTHFMKELSEKLDEARAEASYKLLALKDA 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A059BA85_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00611 PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 7.223e-80 Identity = 131/187 (70.05%), Postives = 163/187 (87.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+L+A+L+ R LT+++ P+KGRSLLAA DF+ G+VI+SQEPYV PN + E RCDGCF+ S L+KCSAC VWYCGSSCQK EWK+HRLEC LA+LDKE+RKSVTP+IR+M+KLY+RRKLQ+E +I TAMDNY+LV+ALVSHMS+IDEKQL+LYAQMANL+N+ILQ P I+IKE+AENFSK+ Sbjct: 1 MEDLKAALRDRCLTVASLPEKGRSLLAATDFHQGQVILSQEPYVFAPNAA--EPRCDGCFATSARLRKCSACQAVWYCGSSCQKSEWKMHRLECMALARLDKEKRKSVTPSIRLMIKLYIRRKLQDEKIISTTAMDNYSLVDALVSHMSEIDEKQLVLYAQMANLINIILQWPEINIKEVAENFSKL 185 HSP 2 Score: 253.062 bits (645), Expect = 4.357e-70 Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDK 1640 + +CNAHTICDSELR LGTGLYPVISIINHSCLPNAVL+FEGR AVVRAVQHIP+ SEV ISY+ETA ST TR K+L+EQY F C C RC KLGQ DI+ESAILEGYRC D+ CSGFLLR+S+++GFVCQQCG +RNKEEIR IAS+IK +S++ Sbjct: 184 KLSCNAHTICDSELRPLGTGLYPVISIINHSCLPNAVLLFEGRTAVVRAVQHIPQGSEVLISYIETAGSTTTRLKSLREQYHFACACPRCAKLGQPDDIKESAILEGYRCEDDRCSGFLLRDSEKQGFVCQQCGRVRNKEEIRDIASEIKLMSER 338 HSP 3 Score: 79.7221 bits (195), Expect = 4.310e-12 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWLEKYLALVIDFILWFTSFFHLF 2454 E+WKEAL C+LTIPVYERVYPG+HPLLGLQYY+ GKLEWL L ++ I T + Sbjct: 387 EDWKEALVYCKLTIPVYERVYPGYHPLLGLQYYTSGKLEWL---LGDTVNAIKSLTKAIDIL 445 HSP 4 Score: 73.1738 bits (178), Expect = 6.235e-10 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 LLG+T +AIKS TKA+DILR+THG +T F++EL+MKLEEAR EAS LS ++ Sbjct: 427 LLGDTVNAIKSLTKAIDILRVTHGMNTEFVRELVMKLEEARAEASHNLSCADE 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V7AUN6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G121500g PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.432e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNS--LTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSPLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPEINIKEIAENFSK 188 HSP 2 Score: 237.269 bits (604), Expect = 1.733e-64 Identity = 109/156 (69.87%), Postives = 130/156 (83.33%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSELR +GTGLYPVISIINHSCLPN+VLVFEGR A+VRAV+HIP +EV ISY+ETA ST+TRQK LKEQYLFTC C RC+KLGQ D QESAILEGYRC+ + C GFLL +D KGF CQ C L+ KEE+++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVEHIPIGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKLGQNDDTQESAILEGYRCKSDKCGGFLLHTTDGKGFQCQGCQLVMGKEEVKETITEIELLSEEA 343 HSP 3 Score: 83.5741 bits (205), Expect = 2.959e-13 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 2923 LGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSS 3069 LGE ++ +KS TKAVDILRITHGT+TPFMK+LLMKLEEAR EAS+K SS Sbjct: 434 LGEIEEGVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKFSS 482 HSP 4 Score: 82.0333 bits (201), Expect = 8.833e-13 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 393 EHWTEALAYCKLTIPFYEKVYPSIHPLLGLQYYTCGKLEW 432
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: U5U2I4_PHAVU (Histone-lysine N-methyltransferase ASHR1-like protein OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.628e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSL--TESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSSLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPGINIKEIAENFSK 188 HSP 2 Score: 80.4925 bits (197), Expect = 3.033e-12 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 394 EHWTEALAYCKLTIPFYEKVYPFIHPLLGLQYYTCGKLEW 433 HSP 3 Score: 80.1073 bits (196), Expect = 3.805e-12 Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 + LGE ++ +KS TKAVDILRITHGT+TPFMK+ LMKLEEAR EA +K SS E Sbjct: 432 EWYLGEIEEGVKSLTKAVDILRITHGTNTPFMKDFLMKLEEARAEAFYKFSSVEQ 486 HSP 4 Score: 75.8702 bits (185), Expect = 8.159e-11 Identity = 49/157 (31.21%), Postives = 65/157 (41.40%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESA-ILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSEL K+ YL TC C +K + D QESA +GYRC+ C GFLL ++D KGF CQ C L+ K EI++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKQLYLSTCKCPWGSKESECNDTQESANFKKGYRCKSEKCGGFLLHKTDGKGFQCQGCQLVMGKGEIKETITEIELLSEEA 344
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A072V0H4_MEDTR (Histone-lysine N-methyltransferase OS=Medicago truncatula GN=MTR_3g073000 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.695e-79 Identity = 131/185 (70.81%), Postives = 154/185 (83.24%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQ +L+ LT+ST +KGRSL RDF+PG+VIISQEPYVCVP T+ RCDGCFS +NL KCS C VVWYCG+ CQK EWKLHRLECQ L++LD +RKSVTP+IR+M+KLYLRRKLQ++ +IP TAMDNY LVEALV+HMSDI E+QL+LYAQMANLV+LILQ P I+IKEIA FSK Sbjct: 1 MEELQQALKNCNLTVSTISEKGRSLFTTRDFHPGDVIISQEPYVCVP----TQKRCDGCFSTTNLSKCSRCQVVWYCGTPCQKSEWKLHRLECQALSRLDSNKRKSVTPSIRLMLKLYLRRKLQDQKIIPSTAMDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIANFFSK 181 HSP 2 Score: 245.358 bits (625), Expect = 2.461e-68 Identity = 109/158 (68.99%), Postives = 137/158 (86.71%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 +FACNAHT+CDSELR LGTGLYPV+SIINHSCLPN+VLVF+GR A VRA+QHIPK +EV ISY+ETA ST+TRQK L+EQYLF C+C C+K+GQY D++E+AILEGYRC++ C GFLLR +D K F CQ+CGL+R+KEEI++IA++IK L ++A K Sbjct: 181 KFACNAHTVCDSELRPLGTGLYPVVSIINHSCLPNSVLVFDGREASVRALQHIPKGTEVLISYIETAGSTVTRQKALREQYLFQCVCPLCSKVGQYEDVRENAILEGYRCKNETCDGFLLRTTDGKAFQCQECGLVRDKEEIKQIATEIKFLLEEASK 338 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092647 ID=g.barbadense_cottongen_reftransV1_0092647; Name=g.barbadense_cottongen_reftransV1_0092647; organism=Gossypium barbadense; type=contig; length=3428bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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