g.barbadense_cottongen_reftransV1_0092647, g.barbadense_cottongen_reftransV1_0092647 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: ASHR1_ARATH (Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana GN=ASHR1 PE=2 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 1.610e-86 Identity = 134/185 (72.43%), Postives = 159/185 (85.95%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 M +LQ LQ R L +S P KGRSL ARDF PGEVI+SQ+PY+CVPNN+ +ESRCDGCF +NLKKCSAC VVWYCGSSCQK EWKLHR EC+ L +L+KE+RK VTPTIR+MV+LY++R LQNE V+P+T DNY+LVEALVSHMS+IDEKQ+LLYAQMANLVNLILQ P++D++EIAENFSK Sbjct: 1 MADLQRFLQDRCLGVSNLPQKGRSLFTARDFRPGEVILSQKPYICVPNNTSSESRCDGCFKTNNLKKCSACQVVWYCGSSCQKSEWKLHRDECKALTRLEKEKRKFVTPTIRLMVRLYIKRNLQNEKVLPITTTDNYSLVEALVSHMSEIDEKQMLLYAQMANLVNLILQFPSVDLREIAENFSK 185 HSP 2 Score: 233.802 bits (595), Expect = 3.502e-65 Identity = 104/156 (66.67%), Postives = 135/156 (86.54%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +F+CNAH+ICDSELR G GL+P++SIINHSC PNAVLVFE ++AVVRA+ +I KDSE++ISY+ETA ST+TRQK+LKEQYLF C C RC+ G+ DI+ESAILEGYRC + C+GFLLR+ +EKGFVCQ+C L+R+KEE++K+ASD+K +S+KA Sbjct: 185 KFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVLVFEEQMAVVRAMDNISKDSEITISYIETAGSTLTRQKSLKEQYLFHCQCARCSNFGKPHDIEESAILEGYRCANEKCTGFLLRDPEEKGFVCQKCLLLRSKEEVKKLASDLKTVSEKA 340 HSP 3 Score: 73.9442 bits (180), Expect = 3.373e-12 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 E W+EAL CRL +PVY+RVYP HPL+GLQ+Y+ GKLEWL Sbjct: 389 EIWREALNYCRLIVPVYQRVYPATHPLIGLQFYTQGKLEWL 429 HSP 4 Score: 72.4034 bits (176), Expect = 1.221e-11 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFK 3060 LLGET +A+ S KA DILRI+HG STPFMKEL KLEEAR EAS+K Sbjct: 429 LLGETKEAVSSLIKAFDILRISHGISTPFMKELSAKLEEARAEASYK 475
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD3_MOUSE (Histone-lysine N-methyltransferase SMYD3 OS=Mus musculus GN=Smyd3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.209e-18 Identity = 39/96 (40.62%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDI 1472 CN+ TIC++E++ +G GLYP +S++NHSC PN +VF G ++RAV+ I E++I Y++ ++ R+K L++QY F C C+RC + D+ Sbjct: 180 CNSFTICNAEMQEVGVGLYPSMSLLNHSCDPNCSIVFNGPHLLLRAVREIEAGEELTICYLDMLMTSEERRKQLRDQYCFECDCIRCQTQDKDADM 275
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD3_HUMAN (Histone-lysine N-methyltransferase SMYD3 OS=Homo sapiens GN=SMYD3 PE=1 SV=4) HSP 1 Score: 90.5077 bits (223), Expect = 1.378e-17 Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = 3 Query: 1185 CNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDI 1472 CN+ TIC++E++ +G GLYP IS++NHSC PN +VF G ++RAV+ I E++I Y++ ++ R+K L++QY F C C RC + D+ Sbjct: 180 CNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQDKDADM 275
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMY2B_XENLA (N-lysine methyltransferase SMYD2-B OS=Xenopus laevis GN=smyd2-b PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.607e-16 Identity = 60/197 (30.46%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 180 QPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLILQ-LPNIDIKEIAENFSKVHIERF*ASNSLVYHLS 761 QP GL P KGR L A R F GE++ S Y V ++ + CD CF+ K L KC C +YC CQK +W +H+LEC + + S T+R+ ++ ++K Q E TA + + V+ SH+S +D EK+ L+ ++ L + + N D + F++V+ F + + HL Sbjct: 3 QPEGLERFDSPGKGRGLKATRSFALGELLFSCPAYTYVLTDNERGNHCDFCFTRKEGLSKCGKCKQAFYCNVDCQKGDWPMHKLECSSMCSSGQNWCPS--ETVRLTARILAKQKTQTER----TASERFMSVKEFESHLSKLDNEKKELIENDISALHRFYSKNVHNCDNAALEFLFAQVNCNGFTIEDEELSHLG 193 HSP 2 Score: 86.2705 bits (212), Expect = 3.190e-16 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 3 Query: 1092 FYCNKVRNLNKFCLSWMNICSYLLL*KWQFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 FY V N + L ++ Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G +A VRAVQ I EV SY++ T R LK+ Y F+C C C+ Sbjct: 157 FYSKNVHNCDNAALEFLFA---------QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTVAEVRAVQEIHAGEEVFTSYIDLLYPTEDRNDRLKDSYFFSCDCRECS 266
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_CHICK (N-lysine methyltransferase SMYD2 OS=Gallus gallus GN=SMYD2 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.148e-16 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAV+ I EV SY++ T R L++ Y FTC C C Sbjct: 181 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVKEIEPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCDCRECT 271 HSP 2 Score: 85.5001 bits (210), Expect = 6.631e-16 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 168 QASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNL 656 +A QP GL P KGR L A R + GE++ S Y V S S CDGCF+ K L KC C +YC CQK +W +H+LEC + + S T+R+ ++ ++K+ E T + V+ SH+ +D EK+ L+ +A L + Sbjct: 4 EAVPQPGGLERFASPGKGRGLRALRRYAVGELLFSCPAYTAVLTVSERGSHCDGCFARKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECAAMCAFGQNWNPS--ETVRLTARILAKQKIHPER----TQSEKLLAVKEFESHLDKLDNEKRELIQNDIAALHHF 162
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_HUMAN (N-lysine methyltransferase SMYD2 OS=Homo sapiens GN=SMYD2 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 4.323e-16 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRC 1445 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAVQ I EV SY++ T R L++ Y FTC C C Sbjct: 178 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQEC 267 HSP 2 Score: 68.1662 bits (165), Expect = 2.052e-10 Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 189 GLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLI---LQLPNID 680 GL P KGR L A + F G+++ S Y V + + C+ CF+ K L KC C +YC CQK +W +H+LEC + + S T+R+ ++ ++K+ E T + V+ SH+ +D EK+ L+ + +A L + L P+ D Sbjct: 8 GLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNPS--ETVRLTARILAKQKIHPER----TPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLGFPDND 170
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMY2A_XENLA (N-lysine methyltransferase SMYD2-A OS=Xenopus laevis GN=smyd2-a PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.141e-16 Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 180 QPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLILQ-LPNIDIKEIAENFSKVHIERF*ASNSLVYHLS 761 QP GL P KGR L A R F GE++ + Y V ++ + CD CF+ K L KC C +YC CQK +W +H+LEC + + S T+R+ ++ ++K Q E T + + V+ SH+S +D EK+ L+ + +A L + L D + F++V+ F + + HL Sbjct: 3 QPEGLERFDSPGKGRGLKATRSFALGELLFTCPAYTYVLTDTERGNHCDFCFARKEGLSKCGKCKQAFYCNVDCQKGDWPMHKLECSAMCSYGQNWCPS--ETVRLTARILAKQKTQTER----TPSETFLSVKEFESHLSKLDNEKKELIESDIAALHRFYSKNLHYTDNAALVFLFAQVNCNGFTIEDEELSHLG 193 HSP 2 Score: 85.5001 bits (210), Expect = 5.991e-16 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 Q CN TI D EL LG+ ++P ++++NHSC PN ++ F+G +A +RAVQ I EV SY++ T R L + Y FTC C C+ Sbjct: 176 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNIIVTFKGTVAEIRAVQEIHAGDEVFTSYIDLLYPTEDRNDRLMDSYFFTCDCRECS 266
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_BOVIN (N-lysine methyltransferase SMYD2 OS=Bos taurus GN=SMYD2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 5.661e-16 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRC 1445 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAVQ I EV SY++ T R L++ Y FTC C C Sbjct: 178 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQEC 267 HSP 2 Score: 69.707 bits (169), Expect = 6.261e-11 Identity = 49/169 (28.99%), Postives = 81/169 (47.93%), Query Frame = 3 Query: 189 GLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLI---LQLPNID 680 GL P KGR L A + F G+++ S Y V S + C+ CF+ K L KC C +YC CQ+ +W +H+LEC + + S T+R+ ++ ++K+ E T + V+ SH+ +D EK+ L+ + +A L + L+ P+ D Sbjct: 8 GLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLTVSERGNHCEFCFARKEGLSKCGRCKQAFYCNVECQREDWPMHKLECSPMVVFGENWNPS--ETVRLTARILAKQKIHPER----TPSEKLLAVKEFESHLDKLDNEKRDLIQSDIAALHHFYSKHLEFPDND 170
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_RAT (N-lysine methyltransferase SMYD2 OS=Rattus norvegicus GN=Smyd2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.478e-16 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAVQ I EV SY++ T R L++ Y FTC C C Sbjct: 178 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECT 268 HSP 2 Score: 71.633 bits (174), Expect = 1.826e-11 Identity = 48/158 (30.38%), Postives = 75/158 (47.47%), Query Frame = 3 Query: 216 KGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNLI---LQLPN 674 KGR L A R F+ G+++ S Y CV C+ CF+ K L KC C +YC CQK +W LH+LEC + + S T+R+ ++ ++K+ E T + V SH+ +D EK+ L+ + +A L L+ P+ Sbjct: 17 KGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPS--ETVRLTARILAKQKMHPER----TPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKHLEFPD 168
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Match: SMYD2_MOUSE (N-lysine methyltransferase SMYD2 OS=Mus musculus GN=Smyd2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.655e-16 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCN 1448 Q CN TI D EL LG+ ++P ++++NHSC PN ++ ++G LA VRAVQ I EV SY++ T R L++ Y FTC C C Sbjct: 178 QVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECT 268 HSP 2 Score: 72.4034 bits (176), Expect = 9.472e-12 Identity = 49/158 (31.01%), Postives = 76/158 (48.10%), Query Frame = 3 Query: 216 KGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFS-KSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDID-EKQLLLYAQMANLVNL---ILQLPN 674 KGR L A R F+ G+++ S Y CV C+ CF+ K L KC C +YC CQK +W LH+LEC + L + S T+R+ ++ ++K+ E T + V SH+ +D EK+ L+ + +A L L+ P+ Sbjct: 17 KGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVLGENWNPS--ETVRLTARILAKQKIHPER----TPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFPD 168
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V4M3A4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10022664mg PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 6.734e-80 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 M +LQ L R LT+ P KGRSL ARDF PGEVI+SQEPY+CVPNN ESRCDGCF +NLKKCS C VVWYCGSSCQK EWKLHR EC L++L+KE+R VTPTIR+M+KLY++R LQN+ V+P+T DNY+LVEA+VSHMS++DEKQL+LYAQMANLVNL+LQLP+ID+KEIAENFSK Sbjct: 1 MADLQKFLGDRCLTVLNIPGKGRSLFTARDFRPGEVILSQEPYICVPNN---ESRCDGCFKTNNLKKCSGCQVVWYCGSSCQKSEWKLHRHECIALSRLEKEKRMLVTPTIRLMLKLYIKRNLQNDKVMPITTTDNYSLVEAMVSHMSELDEKQLMLYAQMANLVNLVLQLPSIDLKEIAENFSK 182 HSP 2 Score: 233.417 bits (594), Expect = 4.821e-63 Identity = 103/156 (66.03%), Postives = 135/156 (86.54%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +F+CNAH+ICDSELR G GL+P++SIINHSC PNA+LVFE ++AVVRA+++I KDSEV+ISY+ETA ST+TRQK+LKEQYLF C C C+ +G+ DI+ESAILEGYRC + C+GFLLR+ DEKGFVCQ+C L+R+KEE++K+A D+K +S+KA Sbjct: 182 KFSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAILVFEEQMAVVRAMENISKDSEVTISYIETAGSTLTRQKSLKEQYLFHCECAGCSNIGKPHDIEESAILEGYRCANETCTGFLLRDPDEKGFVCQKCKLLRSKEEVKKLAGDVKTVSEKA 337 HSP 3 Score: 73.559 bits (179), Expect = 4.669e-10 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWL 2391 E W+E L CRL +PVY+R+YP HPL+GLQ+Y+ GKLEWL Sbjct: 386 ESWREVLNYCRLIVPVYQRIYPATHPLIGLQFYTQGKLEWL 426 HSP 4 Score: 71.2478 bits (173), Expect = 2.563e-9 Identity = 34/56 (60.71%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSREDS 3081 + LLGET++A++S KA +ILRI+HGTST FMKEL KL+EAR EAS+KL + +D+ Sbjct: 424 EWLLGETEEAVRSLAKAFEILRISHGTSTHFMKELSEKLDEARAEASYKLLALKDA 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A059BA85_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00611 PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 7.223e-80 Identity = 131/187 (70.05%), Postives = 163/187 (87.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKS-NLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSKV 713 ME+L+A+L+ R LT+++ P+KGRSLLAA DF+ G+VI+SQEPYV PN + E RCDGCF+ S L+KCSAC VWYCGSSCQK EWK+HRLEC LA+LDKE+RKSVTP+IR+M+KLY+RRKLQ+E +I TAMDNY+LV+ALVSHMS+IDEKQL+LYAQMANL+N+ILQ P I+IKE+AENFSK+ Sbjct: 1 MEDLKAALRDRCLTVASLPEKGRSLLAATDFHQGQVILSQEPYVFAPNAA--EPRCDGCFATSARLRKCSACQAVWYCGSSCQKSEWKMHRLECMALARLDKEKRKSVTPSIRLMIKLYIRRKLQDEKIISTTAMDNYSLVDALVSHMSEIDEKQLVLYAQMANLINIILQWPEINIKEVAENFSKL 185 HSP 2 Score: 253.062 bits (645), Expect = 4.357e-70 Identity = 117/155 (75.48%), Postives = 135/155 (87.10%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDK 1640 + +CNAHTICDSELR LGTGLYPVISIINHSCLPNAVL+FEGR AVVRAVQHIP+ SEV ISY+ETA ST TR K+L+EQY F C C RC KLGQ DI+ESAILEGYRC D+ CSGFLLR+S+++GFVCQQCG +RNKEEIR IAS+IK +S++ Sbjct: 184 KLSCNAHTICDSELRPLGTGLYPVISIINHSCLPNAVLLFEGRTAVVRAVQHIPQGSEVLISYIETAGSTTTRLKSLREQYHFACACPRCAKLGQPDDIKESAILEGYRCEDDRCSGFLLRDSEKQGFVCQQCGRVRNKEEIRDIASEIKLMSER 338 HSP 3 Score: 79.7221 bits (195), Expect = 4.310e-12 Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEWLEKYLALVIDFILWFTSFFHLF 2454 E+WKEAL C+LTIPVYERVYPG+HPLLGLQYY+ GKLEWL L ++ I T + Sbjct: 387 EDWKEALVYCKLTIPVYERVYPGYHPLLGLQYYTSGKLEWL---LGDTVNAIKSLTKAIDIL 445 HSP 4 Score: 73.1738 bits (178), Expect = 6.235e-10 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 2920 LLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 LLG+T +AIKS TKA+DILR+THG +T F++EL+MKLEEAR EAS LS ++ Sbjct: 427 LLGDTVNAIKSLTKAIDILRVTHGMNTEFVRELVMKLEEARAEASHNLSCADE 479
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: V7AUN6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G121500g PE=4 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.432e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNS--LTESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSPLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPEINIKEIAENFSK 188 HSP 2 Score: 237.269 bits (604), Expect = 1.733e-64 Identity = 109/156 (69.87%), Postives = 130/156 (83.33%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSELR +GTGLYPVISIINHSCLPN+VLVFEGR A+VRAV+HIP +EV ISY+ETA ST+TRQK LKEQYLFTC C RC+KLGQ D QESAILEGYRC+ + C GFLL +D KGF CQ C L+ KEE+++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELRPVGTGLYPVISIINHSCLPNSVLVFEGRSALVRAVEHIPIGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKLGQNDDTQESAILEGYRCKSDKCGGFLLHTTDGKGFQCQGCQLVMGKEEVKETITEIELLSEEA 343 HSP 3 Score: 83.5741 bits (205), Expect = 2.959e-13 Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 1 Query: 2923 LGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSS 3069 LGE ++ +KS TKAVDILRITHGT+TPFMK+LLMKLEEAR EAS+K SS Sbjct: 434 LGEIEEGVKSLTKAVDILRITHGTNTPFMKDLLMKLEEARAEASYKFSS 482 HSP 4 Score: 82.0333 bits (201), Expect = 8.833e-13 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 393 EHWTEALAYCKLTIPFYEKVYPSIHPLLGLQYYTCGKLEW 432
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: U5U2I4_PHAVU (Histone-lysine N-methyltransferase ASHR1-like protein OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 1.628e-79 Identity = 132/188 (70.21%), Postives = 162/188 (86.17%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSL--TESRCDGCFSKSN-LKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 ME+LQ++L+ GL++ST P+KGRSL A RDFYPG+VII QEPYVCVPNNS T RCDGC + SN L++CS CHV +YC ++CQ+ EWKLHRLEC++L++LDK++RKSVTP+IR+MV+LYLRRKLQ++ VI TAMDNYNLVEALV+HMSDI E+QL+LYAQMANLV ILQ P I+IKEIAENFSK Sbjct: 1 MEDLQSALKDCGLSVSTVPEKGRSLFATRDFYPGDVIIGQEPYVCVPNNSSLSTPKRCDGCLTTSNVLRRCSRCHVAYYCRTACQRSEWKLHRLECEVLSRLDKDKRKSVTPSIRLMVRLYLRRKLQDDKVISSTAMDNYNLVEALVAHMSDITEEQLVLYAQMANLVYYILQWPGINIKEIAENFSK 188 HSP 2 Score: 80.4925 bits (197), Expect = 3.033e-12 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 2269 EEWKEALAICRLTIPVYERVYPGFHPLLGLQYYSCGKLEW 2388 E W EALA C+LTIP YE+VYP HPLLGLQYY+CGKLEW Sbjct: 394 EHWTEALAYCKLTIPFYEKVYPFIHPLLGLQYYTCGKLEW 433 HSP 3 Score: 80.1073 bits (196), Expect = 3.805e-12 Identity = 37/55 (67.27%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 2914 DRLLGETDDAIKSFTKAVDILRITHGTSTPFMKELLMKLEEARVEASFKLSSRED 3078 + LGE ++ +KS TKAVDILRITHGT+TPFMK+ LMKLEEAR EA +K SS E Sbjct: 432 EWYLGEIEEGVKSLTKAVDILRITHGTNTPFMKDFLMKLEEARAEAFYKFSSVEQ 486 HSP 4 Score: 75.8702 bits (185), Expect = 8.159e-11 Identity = 49/157 (31.21%), Postives = 65/157 (41.40%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESA-ILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKA 1643 +FACNAHTICDSEL K+ YL TC C +K + D QESA +GYRC+ C GFLL ++D KGF CQ C L+ K EI++ ++I+ LS++A Sbjct: 188 KFACNAHTICDSELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKQLYLSTCKCPWGSKESECNDTQESANFKKGYRCKSEKCGGFLLHKTDGKGFQCQGCQLVMGKGEIKETITEIELLSEEA 344
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Match: A0A072V0H4_MEDTR (Histone-lysine N-methyltransferase OS=Medicago truncatula GN=MTR_3g073000 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.695e-79 Identity = 131/185 (70.81%), Postives = 154/185 (83.24%), Query Frame = 3 Query: 156 MEELQASLQPRGLTLSTFPDKGRSLLAARDFYPGEVIISQEPYVCVPNNSLTESRCDGCFSKSNLKKCSACHVVWYCGSSCQKLEWKLHRLECQLLAKLDKERRKSVTPTIRMMVKLYLRRKLQNENVIPVTAMDNYNLVEALVSHMSDIDEKQLLLYAQMANLVNLILQLPNIDIKEIAENFSK 710 MEELQ +L+ LT+ST +KGRSL RDF+PG+VIISQEPYVCVP T+ RCDGCFS +NL KCS C VVWYCG+ CQK EWKLHRLECQ L++LD +RKSVTP+IR+M+KLYLRRKLQ++ +IP TAMDNY LVEALV+HMSDI E+QL+LYAQMANLV+LILQ P I+IKEIA FSK Sbjct: 1 MEELQQALKNCNLTVSTISEKGRSLFTTRDFHPGDVIISQEPYVCVP----TQKRCDGCFSTTNLSKCSRCQVVWYCGTPCQKSEWKLHRLECQALSRLDSNKRKSVTPSIRLMLKLYLRRKLQDQKIIPSTAMDNYKLVEALVAHMSDIKEEQLVLYAQMANLVHLILQWPEINIKEIANFFSK 181 HSP 2 Score: 245.358 bits (625), Expect = 2.461e-68 Identity = 109/158 (68.99%), Postives = 137/158 (86.71%), Query Frame = 3 Query: 1176 QFACNAHTICDSELRSLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHIPKDSEVSISYVETAASTITRQKTLKEQYLFTCICVRCNKLGQYGDIQESAILEGYRCRDNGCSGFLLRESDEKGFVCQQCGLIRNKEEIRKIASDIKALSDKALK 1649 +FACNAHT+CDSELR LGTGLYPV+SIINHSCLPN+VLVF+GR A VRA+QHIPK +EV ISY+ETA ST+TRQK L+EQYLF C+C C+K+GQY D++E+AILEGYRC++ C GFLLR +D K F CQ+CGL+R+KEEI++IA++IK L ++A K Sbjct: 181 KFACNAHTVCDSELRPLGTGLYPVVSIINHSCLPNSVLVFDGREASVRALQHIPKGTEVLISYIETAGSTVTRQKALREQYLFQCVCPLCSKVGQYEDVRENAILEGYRCKNETCDGFLLRTTDGKAFQCQECGLVRDKEEIKQIATEIKFLLEEASK 338 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092647 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092647 ID=g.barbadense_cottongen_reftransV1_0092647; Name=g.barbadense_cottongen_reftransV1_0092647; organism=Gossypium barbadense; type=contig; length=3428bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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