g.barbadense_cottongen_reftransV1_0092622, g.barbadense_cottongen_reftransV1_0092622 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC4_ARATH (Xyloglucan glycosyltransferase 4 OS=Arabidopsis thaliana GN=CSLC4 PE=1 SV=1) HSP 1 Score: 424.091 bits (1089), Expect = 5.152e-134 Identity = 217/457 (47.48%), Postives = 293/457 (64.11%), Query Frame = 3 Query: 438 APLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKS 1808 APL++ L + V+ LI S ++R+ + + +K +K + + E+I D+E S++PMVL+QIPM NEREVY+ SIGAA L WP DRI+IQVLDDS DP ++ +++ E WA KG+NI Y R R GYKAG LK M YVK ++V IFDADF P PDFL +T+P NPEL LVQARW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL E+GGW +RTTVEDMD+AVRA L GWKF+YL ++V ELP + +AY+ QQHRW GP LFR + IIK+ K+S WKK ++I+ FF++RKL+ +F +C+ILP T+ +PE E+P W Y+P I++LN + +P+SF LV ++LFEN MS+ + A GL + G EW+VT+K G + +S Sbjct: 145 APLVISLSRFCTVLFLIQS----LDRLVLCLGCFWIKF--KKIEPKLTEESI--DLE-DPSSFPMVLIQIPMCNEREVYEQSIGAASQLDWPKDRILIQVLDDSDDPNLQLLIKEEVSVWAEKGVNIIYRHRLIRTGYKAGNLKSAMTCDYVKDYEFVTIFDADFTPNPDFLKKTVPHFKGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIYLNDVEVTCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIIKS----------------------------KISVWKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWIICYVPIFISLLNILPSPKSFPFLVPYLLFENTMSITKFNAMISGLFQFGSAYEWVVTKKTGRSSES 564
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC9_ORYSJ (Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica GN=CSLC9 PE=2 SV=2) HSP 1 Score: 415.231 bits (1066), Expect = 1.407e-131 Identity = 205/462 (44.37%), Postives = 287/462 (62.12%), Query Frame = 3 Query: 423 WGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKS 1808 W + +A + P ++ C+++ ++ +R+ + + L KP+ K A+ D + + YPMVLVQIPM NE+EVYQ SI A C L WP ++QVLDDS DPT + ++ E +W G I Y R R+GYKAG LK M SYVK ++V IFDADFQP PDFL RT+P N EL LVQARW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL+++GGW +RTTVEDMD+AVRA L+GWKF++L ++ + ELP + +AYR QQHRW GP LFR + +IIK C K+ WKK ++I+ FF++RKL+ +F +C+ILP T+ VPE E+P W YIP+++++LN + +P+SF ++ ++LFEN MS+ + A GL + G EW+VT+K G + + Sbjct: 72 WLRFRATYVAPFIQFLTDACVVLFLIQSADRLIQCLGCFYIHLKRIKPNP--KSPALPDAEDPDAAYYPMVLVQIPMCNEKEVYQQSIAAVCNLDWPRSNFLVQVLDDSDDPTTQTLIREEVLKWQQNGARIVYRHRVLRDGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPNPDFLKRTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALDDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIK----------------------C------KIVFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGNAYEWVVTKKSGRSSEG 503
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 4.716e-131 Identity = 212/465 (45.59%), Postives = 288/465 (61.94%), Query Frame = 3 Query: 417 VIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIK-DDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKS 1808 V W ++A I P +K C+++ ++ ++R+ + + +K KP R E + DD E S YPMVLVQIPM NEREVY+ SI A C L WP DR+++QVLDDS D +I++++ E +W+ KG+NI Y R R GYKAG LK M YV+ ++V IFDADFQP DFL T+P PEL LVQARW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL E+GGW +RTTVEDMD+AVRA L GWKF+YL +KV E+P + +AY+ QQHRW GP LFR + I+ +K+ + WKK ++I FF++RKL+ +F +CVILP T+ VPE E+P W Y+P +++LN + P+SF +V ++LFEN MS+ + A GL + G EWIVT+K G + +S Sbjct: 158 VGWLSLRADYIAPPIKALSKFCIVLFLVQSVDRLILCLGCLWIKFKKIKP--RIDEEHFRNDDFEGSGSEYPMVLVQIPMCNEREVYEQSISAVCQLDWPKDRLLVQVLDDSDDESIQELIRDEVTKWSQKGVNIIYRHRLVRTGYKAGNLKSAMSCDYVEAYEFVAIFDADFQPNSDFLKLTVPHFKEKPELGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLRSILTSKI----------------------------AMWKKANLILLFFLLRKLILPFYSFTLFCVILPITMFVPEAELPIWVICYVPIFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSES 592
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC6_ARATH (Probable xyloglucan glycosyltransferase 6 OS=Arabidopsis thaliana GN=CSLC6 PE=1 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 8.534e-129 Identity = 223/562 (39.68%), Postives = 326/562 (58.01%), Query Frame = 3 Query: 423 WGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKW--EAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIV 2102 W +I+A + P L+ VC+++ ++ ++R+ + + +KL KP ++ + + + V L + YPMV+VQIPM NE+EVYQ SIGA C L WP +R+++QVLDDS++ ++ +++ E Q+W +G+ I Y R R GYKAG LK M YVK ++V IFDADFQP DFL +T+P N ELALVQ RW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL + GGW +RTTVEDMD+AVRA L GWKF+YL +K ELP + +AY+ QQ+RW GP LFR +I+++ KVS KK ++I+ FF++RKL+ +F +CVILP T+ PE +P W YIP I++ILN + PRSF +V ++LFEN MS+ + A GL + EW+VT+KLG + ++ A A + +S +T L + ++ RL+ E+++ L +++ + +F +L Q I F I+G +G V Sbjct: 153 WLEIRASYLAPPLQSLTNVCIVLFLIQSVDRLVLVLGCFWIKLRRIKPVASMEYPTKLVGEGVRLED--YPMVIVQIPMCNEKEVYQQSIGAVCMLDWPRERMLVQVLDDSSELDVQQLIKAEVQKWQQRGVRIVYRHRLIRTGYKAGNLKAAMNCEYVKDYEFVAIFDADFQPPADFLKKTVPHFKGNEELALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDCGGWLERTTVEDMDIAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQYRWHSGPMQLFRLCFFDILRS----------------------------KVSAAKKANMIFLFFLLRKLILPFYSFTLFCVILPLTMFFPEANLPSWVVCYIPGIMSILNIIPAPRSFPFIVPYLLFENTMSVTKFGAMISGLFKFDSSYEWVVTKKLGRSSEADLVAYAESGSLVESTTIQRSSS-DSGLTELSK--LGAAKKAGKTKRNRLYRTEIALAFILLAASVRSLLSAQGIHFYFLLFQGITFVIVGLDLIGEQV 681
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSJ (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. japonica GN=CSLC2 PE=2 SV=2) HSP 1 Score: 410.609 bits (1054), Expect = 1.825e-128 Identity = 211/464 (45.47%), Postives = 291/464 (62.72%), Query Frame = 3 Query: 417 VIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKS 1808 + W +A I ++ C+++ V+ ++R+ + + +KL RK R + + + E +PMVLVQIPM NE+EVY+ SI AAC L WP ++ +IQVLDDS+D +I+ +++ E +W+ +G+NI Y R R GYKAG LK M YVK ++V IFDADFQP PDFL +TIP NPEL LVQARW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL E+GGW +RTTVEDMD+AVRA L GWKF++L +KV ELP + +AYR QQHRW GP +LFR + +I+ K+S+WKK ++I FF++RKL+ +F +CVILP T+ VPE E+P W Y+P ++ LN + +PRSF +V ++LFEN MS+ + A GL + G EWIVT+K G + +S Sbjct: 168 ISWMSFRADYIRRPIEFLSKACILLFVIQSMDRLVLCLGCFWIKL--RKIKPRIEGDPFR---EGSGYQHPMVLVQIPMCNEKEVYEQSISAACQLDWPREKFLIQVLDDSSDESIQLLIKAEVSKWSHQGVNIVYRHRVLRTGYKAGNLKSAMSCDYVKDYEFVAIFDADFQPTPDFLKKTIPHFEGNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIQALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCELPESYEAYRKQQHRWHSGPMHLFRLCLPDILT----------------------------AKISSWKKANLILLFFLLRKLILPFYSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVTKFNAMVSGLFKLGSSYEWIVTKKSGRSSES 598
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: W1PYY4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00040p00223350 PE=4 SV=1) HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0 Identity = 436/591 (73.77%), Postives = 483/591 (81.73%), Query Frame = 3 Query: 351 MDQFPSTTIFPD----TTDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 MD+ T + P+ T DD++ QMA+IW QI+APLIVPLLKLAV +CLIMS+MLF+ERVYM +VI LVKLFG+KP KR+KWEAIKDD+ELGN+ YPMVLVQIPMYNE+EVYQLSIGAACGLSWPSDRI+IQVLDDSTDPTIKD+VELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKH YV+ CDYV IFDADFQPEPDFLWRTIPFL+HNPE+ LVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAGVWRI+ALNEAGGWKDRTTVEDMDLAVRASLKGWKF+YLG LKVKNELPST KAYRYQQHRWSCGPANLFRKM MEI +NK +VS WKK+HVIY+FF VRK+VAHIVTF+FYCV++PATVLVPEVE+PKWGAVYIPS ITILNA+ +PRS HL+VFWILFENVMSLHRTKATFIGL EA RVNEW+VTEKLGDA K G+ K + I G+LH+LEL VGAYLFFC CY + FGKNHYFIYL+ QA+AFFIMGFGY+GT VP+S Sbjct: 1 MDRLSRTGLLPEAFQGTGDDITDQMAIIWQQIRAPLIVPLLKLAVFLCLIMSLMLFMERVYMAVVIVLVKLFGKKPGKRYKWEAIKDDLELGNANYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHGYVRDCDYVAIFDADFQPEPDFLWRTIPFLIHNPEIGLVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIFRNK---------------------------RVSLWKKIHVIYNFFFVRKIVAHIVTFVFYCVVIPATVLVPEVEIPKWGAVYIPSTITILNALSSPRSLHLVVFWILFENVMSLHRTKATFIGLAEARRVNEWVVTEKLGDALKG-----------KAGGKSVKKFWIRIG--------------------GKLHLLELGVGAYLFFCACYDLAFGKNHYFIYLYLQAMAFFIMGFGYIGTFVPHS 533
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: W8Q6G5_ARATH (Glycosyltransferase (Fragment) OS=Arabidopsis thaliana GN=AT5G03760 PE=2 SV=1) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 441/590 (74.75%), Postives = 482/590 (81.69%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPN 2108 M+ +T++ PD+ DD++MQM+++ QI+APLIVP L+L V +CL MSVMLF+ERVYMGIVI+LVKLFGRKPDKRFK+E IKDD+ELGNSAYPMVL+QIPM+NEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE+EC RWASKG+NIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPE DFLWRT+P+L+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPS+IT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD A + + RFRFG+ R+HVLEL VG YL F GCY FGKNHY++YLFAQAIAFFI GFG +GTIVPN Sbjct: 1 MELGDTTSVIPDSFMGYRDDITMQMSMVLDQIRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPIKDDIELGNSAYPMVLIQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEMECSRWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEADFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVTVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTSKKVIRFRFGD-------------------------------RIHVLELGVGMYLLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: A0A078FGS2_BRANA (BnaA03g01040D protein OS=Brassica napus GN=BnaA03g01040D PE=4 SV=1) HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0 Identity = 448/591 (75.80%), Postives = 488/591 (82.57%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 M+ S+ + PD+ DD++MQM +I QI+APLIVP+L+LAV +CL MSVMLF+ERVYMGIVI+LVKLFGRKP+KRFKWE +KDD+E GNS YPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE EC RWASKGINIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPEPD+LWRT+PFL+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISAL+EAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM +EI+ NK V+ WKKVHVIYSFFVVRK+VAHIVTFIFYCV+LPATVLVPEV VPKWGAVYIPSIIT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD K+K+A K +K RFRFG+ R+HVLEL VG YLFF GCY V FGKNHY++YLFAQAIAFFI G G +GTIVPNS Sbjct: 1 MELGDSSAVIPDSFMGYRDDITMQMTMILDQIRAPLIVPVLRLAVYICLTMSVMLFVERVYMGIVISLVKLFGRKPEKRFKWEPMKDDIEHGNSVYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEKECSRWASKGINIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDYLWRTVPFLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALSEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMALEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKIVAHIVTFIFYCVVLPATVLVPEVTVPKWGAVYIPSIITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDL-KAKSATKTLKKLRFRFGD-------------------------------RIHVLELGVGMYLFFVGCYDVFFGKNHYYLYLFAQAIAFFIAGLGQIGTIVPNS 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: M4CNJ1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra005779 PE=4 SV=1) HSP 1 Score: 897.501 bits (2318), Expect = 0.000e+0 Identity = 449/591 (75.97%), Postives = 486/591 (82.23%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 M+ S + PD+ DD++MQM +I QI+APLIVP+L+LAV +CL MSVMLF+ERVYMGIVI+LVKLFGRKP+KRFKWE +KDD+E GNS YPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE EC RWASKGINIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPEPD+LWRT+PFL+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISAL+EAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRK+VAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPSIIT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD K+K+A K +K RFRFG+ R+HVLEL VG YLFF GCY V FGKNHY++YLFAQAIAFFI G G +GTIVPNS Sbjct: 1 MELGDSAAVIPDSFMGYRDDITMQMTMILDQIRAPLIVPVLRLAVYICLTMSVMLFVERVYMGIVISLVKLFGRKPEKRFKWEPMKDDIEHGNSVYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEKECSRWASKGINIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDYLWRTVPFLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALSEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKIVAHIVTFIFYCVILPATVLVPEVTVPKWGAVYIPSIITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDL-KAKSATKTLKKLRFRFGD-------------------------------RIHVLELGVGMYLFFVGCYDVFFGKNHYYLYLFAQAIAFFIAGLGQIGTIVPNS 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: D7LWT4_ARALL (ATCSLA09 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487155 PE=4 SV=1) HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0 Identity = 439/585 (75.04%), Postives = 479/585 (81.88%), Query Frame = 3 Query: 366 STTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPN 2108 +T++ PD+ DD++MQM+++ QI+APLIVP+L+L V +CL MSVMLF+ERVYMGIVI+LVKLFGRKPDKRFK+E +KDD+ELGNS YPMVLVQIPM+NEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE+EC RWASKG+NIKYEIRDNR GYKAGALKEGMK SYVK CDYV IFDADFQPEPDFLWRT+P+L+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPS+IT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD A + RFRFG+ R+HVLEL VG YL F GCY FGKNHY++YLFAQAIAFFI GFG +GTIVPN Sbjct: 7 TTSVIPDSFMGYRDDITMQMSMVLDQIRAPLIVPVLRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPMKDDIELGNSVYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEMECSRWASKGVNIKYEIRDNRKGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVSVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTPKKVLRFRFGD-------------------------------RIHVLELGVGMYLLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 533 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092622 ID=g.barbadense_cottongen_reftransV1_0092622; Name=g.barbadense_cottongen_reftransV1_0092622; organism=Gossypium barbadense; type=contig; length=2774bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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