g.barbadense_cottongen_reftransV1_0092622, g.barbadense_cottongen_reftransV1_0092622 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA4_ORYSJ (Probable mannan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLA4 PE=2 SV=1) HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0 Identity = 322/570 (56.49%), Postives = 394/570 (69.12%), Query Frame = 3 Query: 453 PLLKLAVVVCLIMSVMLFIERVYMGIV-IALVKLFGRKPDKRFKWEAIKDDVELGN----------------SAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 P+L+ AV C+ MSVML +E YM +V + VKL R P++R+KWE I +A+PMVLVQIPMYNE+EVY+LSIGAAC L+WP DRI+IQVLDDSTDP IKD+VELEC+ WA K INIKYEIRDNR GYKAGALK+GM+H Y + CD+V IFDADFQPE DFL +TIPFLVHNP++ LVQ RW+FVN D CLMTR+Q+MSLDYHF VEQE GSS +SFFGFNGTAGVWR+SA+NEAGGWKDRTTVEDMDLAVRASLKGW+FLY+G ++VK+ELPST KAYR+QQHRW+CG ANLFRKM EI KNK VS WKK+H++YSFF VR++VA I+TF+FYCV++P +V+VPEV +P WG VYIP+ ITI+NA+ P S HL+ FWILFENVM++HR +A GLLE VN+W+VTEK+GD K + + L+P C V R+++ EL V YL C Y +V G HY++Y++ QA AF +GFG+ GT P S Sbjct: 37 PVLQFAVWACMAMSVMLVLEVAYMSLVSLVAVKLLRRVPERRYKWEPITTGSGGVGGGDGEDEEAATGGREAAAFPMVLVQIPMYNEKEVYKLSIGAACALTWPPDRIIIQVLDDSTDPAIKDLVELECKDWARKEINIKYEIRDNRKGYKAGALKKGMEHIYTQQCDFVAIFDADFQPESDFLLKTIPFLVHNPKIGLVQTRWEFVNYDVCLMTRIQKMSLDYHFKVEQESGSSMHSFFGFNGTAGVWRVSAINEAGGWKDRTTVEDMDLAVRASLKGWQFLYVGDIRVKSELPSTFKAYRHQQHRWTCGAANLFRKMATEIAKNK---------------------------GVSVWKKLHLLYSFFFVRRVVAPILTFLFYCVVIPLSVMVPEVSIPVWGMVYIPTAITIMNAIRNPGSIHLMPFWILFENVMAMHRMRAALTGLLETMNVNQWVVTEKVGDHVKD-----------------------KLEVPLLEPLKPTDC-------VERIYIPELMVAFYLLVCASYDLVLGAKHYYLYIYLQAFAFIALGFGFAGTSTPCS 549
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLAE_ARATH (Probable mannan synthase 14 OS=Arabidopsis thaliana GN=CSLA14 PE=2 SV=2) HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0 Identity = 325/580 (56.03%), Postives = 411/580 (70.86%), Query Frame = 3 Query: 393 DDLSMQ--MAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIK-DDVELG-NSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDN-RNGYKAGALKEGMKHSYVKH--CDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 DD+S+ + + Q + +VP+LK V +C ++SV+LF++ YM IV+A+VKL GR P K KWE+ K DD+EL +S +PMVL+QIP++NE+EV QLSIGAAC LSWP DR++IQVLDDST+ + +V LEC++W S+GI IK E+R R G+KAGAL GMKHSYV C++VVIFDADFQPEPDFL RT+PFLVHNPE+ALVQA WK+ NADEC MTR+QEMSL+YHF VEQ+ GSS FFGFNGTAGVWRI ALNEA GWKDRT VEDMDLAVRA L+G KF+Y+ +KVKNELPS+ +AYR+QQHRWSCGPANLF+K+ MEIIKN Q VS WKKV++IY+FF +RK+V HI TF+FYCVILPATV+ PE+EVPKW +YIP+ ITILNA+ TP+SF+L+++WILFENVM++HR+ T IGLLE RV EWIVT+KLG+++ + F + Y + RL E+ VG YLF CG Y VFG+ + ++YLF Q+IAFF++G GYVG VP++ Sbjct: 10 DDMSVLGVIGYVLEQTRFIFLVPILKRLVNLCQVVSVLLFVDAAYMAIVVAIVKLLGRTPQKVLKWESFKSDDIELAPSSNHPMVLIQIPIFNEKEVCQLSIGAACKLSWPLDRMIIQVLDDSTEEESQKLVRLECKKWESEGITIKSEVRGGFREGFKAGALTAGMKHSYVDEYKCEFVVIFDADFQPEPDFLERTVPFLVHNPEIALVQAGWKYGNADECCMTRIQEMSLNYHFAVEQKSGSSILGFFGFNGTAGVWRIKALNEAEGWKDRTIVEDMDLAVRAYLRGSKFVYVDDVKVKNELPSSFQAYRFQQHRWSCGPANLFKKIAMEIIKN---------------------------QNVSLWKKVYLIYNFFFLRKIVVHIFTFVFYCVILPATVIFPEIEVPKWTTIYIPATITILNAIATPKSFYLILYWILFENVMAMHRSIGTLIGLLETSRVKEWIVTQKLGESNN--------LRENLIFPDHYSFPE-------------------------RLRWREIMVGMYLFICGYYDFVFGRTYLYVYLFLQSIAFFVVGVGYVGMPVPST 529
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1) HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0 Identity = 315/554 (56.86%), Postives = 395/554 (71.30%), Query Frame = 3 Query: 483 LIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAI-------------KDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVP 2105 L M+VM+ E++++ V V+ F +PD+R+KW I + + +A+PMVLVQIPM+NEREVY+LSIGAAC L WPSDR+VIQVLDDSTD +KD+VE ECQ+W KG+NIKYE+R NR GYKAGALKEG+KH YVK C+Y+ +FDADFQPE DFL RT+PFLVHN E+ALVQ RWKFVNA+ECL+TR QEMSLDYHF EQE GSS YSFFGFNGTAGVWRI+A+++AGGWKDRTTVEDMDLAVRA+L+GWKF+Y+G +KVK+ELPST KAYR+QQHRWSCGPANLF+KM++EI++NK KVS W K+H+ Y FF V K+ AH VTFI+YC ++P +V +PE+E+P WG VY+P++IT+ AVGTP SFHL++ W+LFENVMSLHR KA G+LEAGRVNEW+VTEKLGDA+K+ KP + KV +E T L P L + + H E+ VG + G Y V++ K Y+I+LF Q +AF I+GF Y+G P Sbjct: 57 LAMTVMILAEKLFVAAVCLAVRAFRLRPDRRYKWLPIGAAAAAASSEDDEESGLVAAAAAFPMVLVQIPMFNEREVYKLSIGAACSLDWPSDRVVIQVLDDSTDLVVKDLVEKECQKWQGKGVNIKYEVRGNRKGYKAGALKEGLKHDYVKECEYIAMFDADFQPESDFLLRTVPFLVHNSEIALVQTRWKFVNANECLLTRFQEMSLDYHFKYEQEAGSSVYSFFGFNGTAGVWRIAAIDDAGGWKDRTTVEDMDLAVRATLQGWKFVYVGDVKVKSELPSTFKAYRFQQHRWSCGPANLFKKMMVEILENK---------------------------KVSFWNKIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLWGVVYVPTVITLCKAVGTPSSFHLVILWVLFENVMSLHRIKAAVTGILEAGRVNEWVVTEKLGDANKT--------KPDTNGSDAVKVIDVE-LTTPLIPKLKKRRTRFWD----KYHYSEIFVGICIILSGFYDVLYAKKGYYIFLFIQGLAFLIVGFDYIGVCPP 570
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLAB_ARATH (Probable mannan synthase 11 OS=Arabidopsis thaliana GN=CSLA11 PE=2 SV=2) HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0 Identity = 300/502 (59.76%), Postives = 366/502 (72.91%), Query Frame = 3 Query: 591 IKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGT 2096 +++D+ELGN +PMVLVQIPMYNEREV++LSIGAAC L WP DR+++QVLDDSTDPTI +MV EC +WA+KGINIK E RDNRNGYKAGALK+GM+HSYVK C Y+ IFDADFQPEPD+L RT+PFL+HNPELALVQARWKFVNA +CLMTRMQEMSL+YHFT EQE GS+ ++FFGFNGTAGVWR++A+ EAGGWKDRTTVEDMDLAVR L GWKF+++ + VK+ELPS KA+R+QQHRWSCGPANLFRKM MEII+NK +V+ WKK++VIYSFF VRK++ H TF FYC ILP +V PEV +P W VY P +IT+ NA+ TPRSF+L++FW+LFENVM++HRTK TFIGLLE GRVNEW+VTEKLGDA L+ L+ Q + R++ E+ VG Y+ C Y +VFGK +IYL+ QA+AF I G G++GT Sbjct: 1 MQEDLELGNQNFPMVLVQIPMYNEREVFKLSIGAACRLIWPLDRLIVQVLDDSTDPTIMEMVSTECGKWATKGINIKCERRDNRNGYKAGALKQGMRHSYVKTCTYIAIFDADFQPEPDYLERTVPFLIHNPELALVQARWKFVNAKKCLMTRMQEMSLNYHFTAEQESGSTRHAFFGFNGTAGVWRLAAMEEAGGWKDRTTVEDMDLAVRVGLHGWKFVFVNDVSVKSELPSQFKAFRFQQHRWSCGPANLFRKMTMEIIRNK---------------------------RVTIWKKLYVIYSFFFVRKIIVHFFTFFFYCFILPTSVFFPEVNIPTWSTVYFPFMITLFNAIATPRSFYLVIFWVLFENVMAMHRTKGTFIGLLEGGRVNEWVVTEKLGDA--------------------------------LETKLLPQVRKPRNGFLERINSKEMMVGIYILCCASYNLVFGKTVLYIYLYMQALAFIIAGIGFIGT 443
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA2_ORYSJ (Probable mannan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLA2 PE=2 SV=2) HSP 1 Score: 603.594 bits (1555), Expect = 0.000e+0 Identity = 297/556 (53.42%), Postives = 383/556 (68.88%), Query Frame = 3 Query: 459 LKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYP-----MVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 L+ AV CL MS ML E +MG+ R ++WE + ++ A MVLVQIPMYNE+EVY+LSIGAAC L+WP DRI+IQVLDDSTDP +K++VELEC+ WASK INIKYE+R+NR GYKAGAL++GM+H+Y + CD+V IFDADF+PE DFL +T+P+L+HNP++ALVQ RW+FVN + CLMTR+Q+MSLDYHF VEQE GS ++FFGFNGTAGVWR+SA+N++GGWKDRTTVEDMDLAVRASLKGW+FLY+G ++VK+ELPST +AYR+QQHRW+CG ANLFRKM EII NK +VS WKK H++YSFF VR+ +A I+TF+FYC+++P + +VPEV +P WG VYIP+ ITI+NA+ P S HL+ FWILFENVM++HR +A GLLE R N+W+VTEK+GD K E + L+P +C R+++ EL + YL C Y V G + Y+IY++ QA+AF +MGFG+VGT P S Sbjct: 82 LRAAVWACLAMSAMLVAEAAWMGLASLAAAAARRLRGYGYRWEPMAAPPDVEAPAPAPAEFPMVLVQIPMYNEKEVYKLSIGAACALTWPPDRIIIQVLDDSTDPFVKELVELECKEWASKKINIKYEVRNNRKGYKAGALRKGMEHTYAQLCDFVAIFDADFEPESDFLLKTMPYLLHNPKIALVQTRWEFVNYNVCLMTRIQKMSLDYHFKVEQESGSFMHAFFGFNGTAGVWRVSAINQSGGWKDRTTVEDMDLAVRASLKGWEFLYVGDIRVKSELPSTFQAYRHQQHRWTCGAANLFRKMAWEIITNK---------------------------EVSMWKKYHLLYSFFFVRRAIAPILTFLFYCIVIPLSAMVPEVTIPVWGLVYIPTAITIMNAIRNPGSVHLMPFWILFENVMAMHRMRAALSGLLETARANDWVVTEKVGDQVKD-----------------------ELDVPLLEPLKPTEC-------AERIYIPELLLALYLLICASYDFVLGNHKYYIYIYLQAVAFTVMGFGFVGTRTPCS 580
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA6_ORYSJ (Probable mannan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLA6 PE=2 SV=2) HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0 Identity = 291/577 (50.43%), Postives = 393/577 (68.11%), Query Frame = 3 Query: 384 DTTDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWE--AIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPN 2108 DT + + W Q++ L+VPLL+ AVV C++MSV++ E+V++G+V A+VKL R+P + ++ + ++DD E G +++PMVLVQIPMYNE+EVYQLSIGAAC L+WP+DR+++QVLDDSTD +K++V EC+RW KGIN+KYE R +R GYKAG L+EGM+ YV+ C++V + DADFQP PDFL +T+PFLVHNP LALVQ RW+FVNA++CL+TRMQEMS+DYHF VEQE GSS +FFG+NGTAGVWR ++E+GGW+DRTT EDMDLA+RA L GW+F+Y+GS+KVK+ELPSTLKAYR QQHRWSCGPA LF+KM EI+ K KVS WKK+++ Y FF+ R++++ TF F+ V+LP V PEV++P W + IP+ I +L++VGTPRS HL++ W LFENVM+LHR KAT IG EAGR NEWIVT+KLG+ K R R+K R H LEL +G +L CY ++ + ++I+L +Q+I +F +GF ++G V + Sbjct: 58 DTVAAVVESLVQAWRQVRMELLVPLLRGAVVACMVMSVIVLAEKVFLGVVSAVVKLLRRRPARLYRCDPVVVEDDDEAGRASFPMVLVQIPMYNEKEVYQLSIGAACRLTWPADRLIVQVLDDSTDAIVKELVRKECERWGKKGINVKYETRKDRAGYKAGNLREGMRRGYVQGCEFVAMLDADFQPPPDFLLKTVPFLVHNPRLALVQTRWEFVNANDCLLTRMQEMSMDYHFKVEQEAGSSLCNFFGYNGTAGVWRRQVIDESGGWEDRTTAEDMDLALRAGLLGWEFVYVGSIKVKSELPSTLKAYRSQQHRWSCGPALLFKKMFWEILAAK---------------------------KVSFWKKLYMTYDFFIARRIISTFFTFFFFSVLLPMKVFFPEVQIPLWELILIPTAIILLHSVGTPRSIHLIILWFLFENVMALHRLKATLIGFFEAGRANEWIVTQKLGNIQK------LKSIVRVTKNCRFK---------------------------DRFHCLELFIGGFLLTSACYDYLYRDDIFYIFLLSQSIIYFAIGFEFMGVSVSS 574
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA3_ORYSJ (Probable mannan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLA3 PE=2 SV=1) HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0 Identity = 291/497 (58.55%), Postives = 360/497 (72.43%), Query Frame = 3 Query: 621 AYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 AYPMVLVQIPMYNEREVY+LSIGAACGLSWPSDR+++QVLDDSTDPT+K +VELEC+ W +KG N+KYE+R+ R GYKAGALKEG+ YV+ C+YV IFDADFQPEPDFL RTIP+LV NP++ LVQA W+FVN ECLMTR+Q+M+L YHF VEQE GSST++FFGFNGTAGVWRISAL EAGGWKDRTTVEDMDLAVRA LKGWKF+YL +KVK+ELPS LK YR+QQHRW+CG ANLFRK+ EI+ K +V W K +++YSFF VRK+VAH+V F+ YCV++P +VL+PEV VP WG VY+P+ IT+L+A+ S H + FWILFENVMS HRTKA FIGLLE G VNEW+VTEKLG+ +K A++ +P RF +R+ + +I +I +LFFC Y + +G ++YF+Y++ QAIAF ++G G+ GTI NS Sbjct: 113 AYPMVLVQIPMYNEREVYKLSIGAACGLSWPSDRLIVQVLDDSTDPTVKGLVELECKSWGNKGKNVKYEVRNTRKGYKAGALKEGLLRDYVQQCNYVAIFDADFQPEPDFLLRTIPYLVRNPQIGLVQAHWEFVNTSECLMTRIQKMTLHYHFKVEQEGGSSTFAFFGFNGTAGVWRISALEEAGGWKDRTTVEDMDLAVRAGLKGWKFVYLADVKVKSELPSNLKTYRHQQHRWTCGAANLFRKVGAEILFTK---------------------------EVPFWWKFYLLYSFFFVRKVVAHVVPFMLYCVVIPFSVLIPEVTVPVWGVVYVPTTITLLHAIRNTSSIHFIPFWILFENVMSFHRTKAMFIGLLELGGVNEWVVTEKLGNGSNTKPASQILERPPCRFWDRWTMSEILFSI-------------------------------FLFFCATYNLAYGGDYYFVYIYLQAIAFLVVGIGFCGTISSNS 551
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA5_ORYSJ (Probable mannan synthase 5 OS=Oryza sativa subsp. japonica GN=CSLA5 PE=2 SV=1) HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0 Identity = 281/574 (48.95%), Postives = 377/574 (65.68%), Query Frame = 3 Query: 423 WGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAI--------KDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVF-GKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS*C 2117 W ++ + P L++ V C++MSVML +E Y V +L G +P++ FKWE + ++ E +AYPMV+VQIPMYNE EVY+LSIGA CGL WP +R++IQVLDDSTD IK++VELEC+ WASKG+NIKY R R G+KAGALK+GM+ Y K C+YV IFDADFQPEPDFL RT+PFL+HN +ALVQARW FVN L+TR+Q+ LDYHF EQE GS+T++FF FNGTAGVWR A+N+AGGWKDRTTVEDMDLAVRA+LKGWKF+YLG L+VK+ELPST KAY QQ RWSCG ANLFRKM+ +++ K KVS+ KK++++YSFF+VR++VA V FI Y VI+P +V++PE+ +P WG YIP+ + I+ A+ P + H + WILFE+VMS+HR +A GLL+ N+WIVT+K+G+ F E + ++ + L + R+++ E+ + +L FC Y +VF GKN ++I L+ Q +AFF++G VGT+ P+ C Sbjct: 58 WVGARSRAVAPALQVGVWACMVMSVMLVVEATYNSAVSVAARLVGWRPERWFKWEPLGGGAGAGDEEKGEAAAAAYPMVMVQIPMYNELEVYKLSIGAVCGLKWPKERLIIQVLDDSTDAFIKNLVELECEDWASKGLNIKYATRSGRKGFKAGALKKGMEWDYAKQCEYVAIFDADFQPEPDFLLRTVPFLMHNQNVALVQARWVFVNDRVSLLTRIQKTFLDYHFKAEQEAGSATFAFFSFNGTAGVWRTEAINDAGGWKDRTTVEDMDLAVRATLKGWKFIYLGDLRVKSELPSTYKAYCRQQFRWSCGGANLFRKMIWDVLVAK---------------------------KVSSLKKIYILYSFFLVRRVVAPAVAFILYNVIIPVSVMIPELFLPIWGVAYIPTALLIVTAIRNPENLHTVPLWILFESVMSMHRLRAAVAGLLQLQEFNQWIVTKKVGN---------------NAFDENNETPLLQKSRKRL---------------INRVNLPEIGLSVFLIFCASYNLVFHGKNSFYINLYLQGLAFFLLGLNCVGTL-PDHCC 573
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLA7_ORYSJ (Probable mannan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLA7 PE=2 SV=1) HSP 1 Score: 554.673 bits (1428), Expect = 0.000e+0 Identity = 270/561 (48.13%), Postives = 369/561 (65.78%), Query Frame = 3 Query: 420 IWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKD-DVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVF-GKNHYFIYLFAQAIAFFIMGFGYVGT 2096 +W +++ +I P L++AV VC++MSVML +E + V VK G +P+ RFKWE + D E G YPMV+VQIPMYNE EVY+LSIGAAC L WP D++++QVLDDSTDP IK++VELEC+ WASKG+NIKY R +R G+KAGALK+GM+ Y K C+Y+ IFDADFQPEP+FL RT+PFL+HNP +ALVQARW FVN L+TR+Q+M DYHF VEQE GS+T++FF FNGTAGVWR +A+NEAGGWKDRTTVEDMDLAVRASL GWKF+Y+G ++VK+ELPST AY QQ RW+CG ANLFRK+ M+++ K +S KK +++YSFF+VR++VA +V + Y +I+P +V++PE+ +P WG YIP + I+ + PR+ H++ FWILFE+VM++ R +A GL+E N+W VT+K+G + E +V + L+ R+++ E+ +L FC Y ++F GK Y+ L+ Q +AF ++GF + G Sbjct: 79 VWVRVRGGVIAPTLQVAVWVCMVMSVMLVVEATFNSAVSLGVKAIGWRPEWRFKWEPLAGADEEKGRGEYPMVMVQIPMYNELEVYKLSIGAACELKWPKDKLIVQVLDDSTDPFIKNLVELECESWASKGVNIKYVTRSSRKGFKAGALKKGMECDYTKQCEYIAIFDADFQPEPNFLLRTVPFLMHNPNVALVQARWAFVNDTTSLLTRVQKMFFDYHFKVEQEAGSATFAFFSFNGTAGVWRTTAINEAGGWKDRTTVEDMDLAVRASLNGWKFIYVGDIRVKSELPSTYGAYCRQQFRWACGGANLFRKIAMDVLVAK---------------------------DISLLKKFYMLYSFFLVRRVVAPMVACVLYNIIVPLSVMIPELFIPIWGVAYIPMALLIITTIRNPRNLHIMPFWILFESVMTVLRMRAALTGLMELSGFNKWTVTKKIGSSV-----------------EDTQVPLLPKTRKRLR---------------DRINLPEIGFSVFLIFCASYNLIFHGKTSYYFNLYLQGLAFLLLGFNFTGN 580
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 1.179e-134 Identity = 222/488 (45.49%), Postives = 301/488 (61.68%), Query Frame = 3 Query: 357 QFPSTTIFPDTTDDLSMQMAVI---WGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIK-DDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKS 1808 Q PS I P +T ++ ++ W ++A I P +K C+++ ++ ++R+ + + +K KP RF E + DD E S YPMVLVQIPM NEREVY+ SI A C L WP DRI++QVLDDS D +I+ +++ E +W+ KG+NI Y R R GYKAG LK M YV+ +YV IFDADFQP PDFL T+P NPEL LVQARW FVN DE L+TR+Q ++L +HF VEQ+V +FFGFNGTAGVWRI AL E+GGW +RTTVEDMD+AVRA L GWKF+YL +KV E+P + +AY+ QQHRW GP LFR + I+ + K++ WKK ++I FF++RKL+ +F +C+ILP T+ VPE E+P W YIP ++ LN + +P+SF +V ++LFEN MS+ + A GL + G EWIVT+K G + +S Sbjct: 136 QSPSLHI-PTSTLEIQSLFHLVYVGWLTLRADYIAPPIKALSKFCIVLFLIQSVDRLVLCLGCFWIKYKKIKP--RFDEEPFRNDDAEGSGSEYPMVLVQIPMCNEREVYEQSISAVCQLDWPKDRILVQVLDDSNDESIQQLIKAEVAKWSQKGVNIIYRHRLVRTGYKAGNLKSAMSCDYVEAYEYVAIFDADFQPTPDFLKLTVPHFKDNPELGLVQARWTFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVKVLCEVPESYEAYKKQQHRWHSGPMQLFRLCLGSILTS----------------------------KIAIWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYIPVFMSFLNLLPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSES 592
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: W1PYY4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00040p00223350 PE=4 SV=1) HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0 Identity = 436/591 (73.77%), Postives = 483/591 (81.73%), Query Frame = 3 Query: 351 MDQFPSTTIFPD----TTDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 MD+ T + P+ T DD++ QMA+IW QI+APLIVPLLKLAV +CLIMS+MLF+ERVYM +VI LVKLFG+KP KR+KWEAIKDD+ELGN+ YPMVLVQIPMYNE+EVYQLSIGAACGLSWPSDRI+IQVLDDSTDPTIKD+VELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKH YV+ CDYV IFDADFQPEPDFLWRTIPFL+HNPE+ LVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAGVWRI+ALNEAGGWKDRTTVEDMDLAVRASLKGWKF+YLG LKVKNELPST KAYRYQQHRWSCGPANLFRKM MEI +NK +VS WKK+HVIY+FF VRK+VAHIVTF+FYCV++PATVLVPEVE+PKWGAVYIPS ITILNA+ +PRS HL+VFWILFENVMSLHRTKATFIGL EA RVNEW+VTEKLGDA K G+ K + I G+LH+LEL VGAYLFFC CY + FGKNHYFIYL+ QA+AFFIMGFGY+GT VP+S Sbjct: 1 MDRLSRTGLLPEAFQGTGDDITDQMAIIWQQIRAPLIVPLLKLAVFLCLIMSLMLFMERVYMAVVIVLVKLFGKKPGKRYKWEAIKDDLELGNANYPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKDLVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHGYVRDCDYVAIFDADFQPEPDFLWRTIPFLIHNPEIGLVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAMEIFRNK---------------------------RVSLWKKIHVIYNFFFVRKIVAHIVTFVFYCVVIPATVLVPEVEIPKWGAVYIPSTITILNALSSPRSLHLVVFWILFENVMSLHRTKATFIGLAEARRVNEWVVTEKLGDALKG-----------KAGGKSVKKFWIRIG--------------------GKLHLLELGVGAYLFFCACYDLAFGKNHYFIYLYLQAMAFFIMGFGYIGTFVPHS 533
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: W8Q6G5_ARATH (Glycosyltransferase (Fragment) OS=Arabidopsis thaliana GN=AT5G03760 PE=2 SV=1) HSP 1 Score: 899.427 bits (2323), Expect = 0.000e+0 Identity = 441/590 (74.75%), Postives = 482/590 (81.69%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPN 2108 M+ +T++ PD+ DD++MQM+++ QI+APLIVP L+L V +CL MSVMLF+ERVYMGIVI+LVKLFGRKPDKRFK+E IKDD+ELGNSAYPMVL+QIPM+NEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE+EC RWASKG+NIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPE DFLWRT+P+L+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPS+IT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD A + + RFRFG+ R+HVLEL VG YL F GCY FGKNHY++YLFAQAIAFFI GFG +GTIVPN Sbjct: 1 MELGDTTSVIPDSFMGYRDDITMQMSMVLDQIRAPLIVPALRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPIKDDIELGNSAYPMVLIQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEMECSRWASKGVNIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEADFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVTVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTSKKVIRFRFGD-------------------------------RIHVLELGVGMYLLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: A0A078FGS2_BRANA (BnaA03g01040D protein OS=Brassica napus GN=BnaA03g01040D PE=4 SV=1) HSP 1 Score: 898.656 bits (2321), Expect = 0.000e+0 Identity = 448/591 (75.80%), Postives = 488/591 (82.57%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 M+ S+ + PD+ DD++MQM +I QI+APLIVP+L+LAV +CL MSVMLF+ERVYMGIVI+LVKLFGRKP+KRFKWE +KDD+E GNS YPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE EC RWASKGINIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPEPD+LWRT+PFL+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISAL+EAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM +EI+ NK V+ WKKVHVIYSFFVVRK+VAHIVTFIFYCV+LPATVLVPEV VPKWGAVYIPSIIT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD K+K+A K +K RFRFG+ R+HVLEL VG YLFF GCY V FGKNHY++YLFAQAIAFFI G G +GTIVPNS Sbjct: 1 MELGDSSAVIPDSFMGYRDDITMQMTMILDQIRAPLIVPVLRLAVYICLTMSVMLFVERVYMGIVISLVKLFGRKPEKRFKWEPMKDDIEHGNSVYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEKECSRWASKGINIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDYLWRTVPFLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALSEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMALEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKIVAHIVTFIFYCVVLPATVLVPEVTVPKWGAVYIPSIITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDL-KAKSATKTLKKLRFRFGD-------------------------------RIHVLELGVGMYLFFVGCYDVFFGKNHYYLYLFAQAIAFFIAGLGQIGTIVPNS 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: M4CNJ1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra005779 PE=4 SV=1) HSP 1 Score: 897.501 bits (2318), Expect = 0.000e+0 Identity = 449/591 (75.97%), Postives = 486/591 (82.23%), Query Frame = 3 Query: 351 MDQFPSTTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPNS 2111 M+ S + PD+ DD++MQM +I QI+APLIVP+L+LAV +CL MSVMLF+ERVYMGIVI+LVKLFGRKP+KRFKWE +KDD+E GNS YPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE EC RWASKGINIKYEIRDNRNGYKAGALKEGMK SYVK CDYV IFDADFQPEPD+LWRT+PFL+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISAL+EAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRK+VAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPSIIT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD K+K+A K +K RFRFG+ R+HVLEL VG YLFF GCY V FGKNHY++YLFAQAIAFFI G G +GTIVPNS Sbjct: 1 MELGDSAAVIPDSFMGYRDDITMQMTMILDQIRAPLIVPVLRLAVYICLTMSVMLFVERVYMGIVISLVKLFGRKPEKRFKWEPMKDDIEHGNSVYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEKECSRWASKGINIKYEIRDNRNGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDYLWRTVPFLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALSEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKIVAHIVTFIFYCVILPATVLVPEVTVPKWGAVYIPSIITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDL-KAKSATKTLKKLRFRFGD-------------------------------RIHVLELGVGMYLFFVGCYDVFFGKNHYYLYLFAQAIAFFIAGLGQIGTIVPNS 532
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Match: D7LWT4_ARALL (ATCSLA09 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487155 PE=4 SV=1) HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0 Identity = 439/585 (75.04%), Postives = 479/585 (81.88%), Query Frame = 3 Query: 366 STTIFPDT----TDDLSMQMAVIWGQIKAPLIVPLLKLAVVVCLIMSVMLFIERVYMGIVIALVKLFGRKPDKRFKWEAIKDDVELGNSAYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDMVELECQRWASKGINIKYEIRDNRNGYKAGALKEGMKHSYVKHCDYVVIFDADFQPEPDFLWRTIPFLVHNPELALVQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYSFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIIKNKVKSIRETSYKC*EFVESVIDCFVISLQKVSTWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLLVFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDAHKSXXXXXXXXXXXXXXGERYKVYQIESAITSLQP*LVIQCLLI*QSNVGRLHVLELSVGAYLFFCGCYAVVFGKNHYFIYLFAQAIAFFIMGFGYVGTIVPN 2108 +T++ PD+ DD++MQM+++ QI+APLIVP+L+L V +CL MSVMLF+ERVYMGIVI+LVKLFGRKPDKRFK+E +KDD+ELGNS YPMVLVQIPM+NEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKD+VE+EC RWASKG+NIKYEIRDNR GYKAGALKEGMK SYVK CDYV IFDADFQPEPDFLWRT+P+L+HNP+LALVQARWKFVN+DECLMTRMQEMSLDYHFTVEQEVGSSTY+FFGFNGTAG+WRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPST KAYRYQQHRWSCGPANLFRKM EI+ NK V+ WKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEV VPKWGAVYIPS+IT+LNAVGTPRS HL+VFWILFENVMSLHRTKATFIGLLE GRVNEWIVTEKLGD A + RFRFG+ R+HVLEL VG YL F GCY FGKNHY++YLFAQAIAFFI GFG +GTIVPN Sbjct: 7 TTSVIPDSFMGYRDDITMQMSMVLDQIRAPLIVPVLRLGVYICLTMSVMLFVERVYMGIVISLVKLFGRKPDKRFKYEPMKDDIELGNSVYPMVLVQIPMFNEREVYQLSIGAACGLSWPSDRIVIQVLDDSTDPTIKDLVEMECSRWASKGVNIKYEIRDNRKGYKAGALKEGMKKSYVKSCDYVAIFDADFQPEPDFLWRTVPYLLHNPKLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGIWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGSLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMAFEIMTNK---------------------------NVTLWKKVHVIYSFFVVRKLVAHIVTFIFYCVILPATVLVPEVSVPKWGAVYIPSVITLLNAVGTPRSLHLMVFWILFENVMSLHRTKATFIGLLEGGRVNEWIVTEKLGDVKAKSATKTPKKVLRFRFGD-------------------------------RIHVLELGVGMYLLFVGCYDAFFGKNHYYLYLFAQAIAFFIAGFGQIGTIVPN 533 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092622 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092622 ID=g.barbadense_cottongen_reftransV1_0092622; Name=g.barbadense_cottongen_reftransV1_0092622; organism=Gossypium barbadense; type=contig; length=2774bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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