g.barbadense_cottongen_reftransV1_0092607, g.barbadense_cottongen_reftransV1_0092607 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092607
Unique Nameg.barbadense_cottongen_reftransV1_0092607
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2730
Homology
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: GLD1_CAEEL (Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis elegans GN=gld-1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.647e-23
Identity = 50/105 (47.62%), Postives = 75/105 (71.43%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            +NFVGR+LGPRG + K++E  TGC++ +RGKGS++D  KE   RG+  +EHL D LH+L++ +   N V I+L+ A E +++LL P  E  D +KR+QL ELA++
Sbjct:  219 YNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAII 323
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: KHDR2_MOUSE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.072e-20
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLR--GRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVG+LLGPRGNSLKR++  TG ++ I GKGS++D  KEE+LR  G   Y HL+D LH+LIE   P      R+  A E I++ L P  +  D I+++QLREL+ L
Sbjct:   74 FNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYL 178
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: KHDR2_RAT (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.100e-20
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLR--GRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVG+LLGPRGNSLKR++  TG ++ I GKGS++D  KEE+LR  G   Y HL+D LH+LIE   P      R+  A E I++ L P  +  D I+++QLREL+ L
Sbjct:   74 FNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYL 178
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: KHDR2_HUMAN (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.298e-20
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLR--GRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVG+LLGPRGNSLKR++  TG ++ I GKGS++D  KEE+LR  G   Y HL+D LH+LIE   P      R+  A E I++ L P  +  D I+++QLREL+ L
Sbjct:   74 FNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYL 178
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: KHDR2_DANRE (KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.725e-19
Identity = 52/107 (48.60%), Postives = 72/107 (67.29%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLR--GRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVG+LLGPRGNS+KR++  TG ++ I GKGS++D  KEE+LR  G   Y HL++ LH+LIE   P      R+  A E I++ L P  +  D I+++QLREL+ L
Sbjct:   74 FNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQLRELSYL 178
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V7ALV8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G059400g PE=4 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.523e-127
Identity = 128/154 (83.12%), Postives = 142/154 (92.21%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQKLGPFMQ LPIC+RLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+G+GLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKLGPFMQALPICTRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGSGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 210.69 bits (535), Expect = 2.523e-127
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPAN+VDIRLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1MQQ1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 6.246e-127
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQK GPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKFGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 206.838 bits (525), Expect = 6.246e-127
Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPANVVD+RLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0B2QY45_GLYSO (KH domain-containing protein OS=Glycine soja GN=glysoja_014171 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 6.246e-127
Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQK GPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKFGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 206.838 bits (525), Expect = 6.246e-127
Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPANVVD+RLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: K4CSP8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g031930.2 PE=4 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 9.467e-127
Identity = 129/155 (83.23%), Postives = 140/155 (90.32%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+TPDVDS  YLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM+ NQGFG+ DRLRHRSP PM S+NLMSNV+G GL GWN L QERLSGPPGM+MDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSTPDVDSNHYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLPNQGFGELDRLRHRSPSPMGSANLMSNVTGAGLSGWNGLPQERLSGPPGMSMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 155

HSP 2 Score: 213.001 bits (541), Expect = 9.467e-127
Identity = 127/134 (94.78%), Postives = 133/134 (99.25%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPA+VVDIRLRQAQEIIEELLKPVDES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKRPKTG
Sbjct:  148 FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPASVVDIRLRQAQEIIEELLKPVDESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRPKTG 281
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1JJZ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.952e-126
Identity = 129/154 (83.77%), Postives = 140/154 (90.91%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQKLGPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGM MDWQ APASPSSYTVKRILRLEIPVD YP+ + + ++L
Sbjct:    1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKLGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMAMDWQVAPASPSSYTVKRILRLEIPVDAYPNFNFVGRLL 154

HSP 2 Score: 207.223 bits (526), Expect = 1.952e-126
Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPAN+VDIRLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANIVDIRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
GLD1_CAEEL2.647e-2347.62Female germline-specific tumor suppressor gld-1 OS... [more]
KHDR2_MOUSE3.072e-2050.47KH domain-containing, RNA-binding, signal transduc... [more]
KHDR2_RAT3.100e-2050.47KH domain-containing, RNA-binding, signal transduc... [more]
KHDR2_HUMAN3.298e-2050.47KH domain-containing, RNA-binding, signal transduc... [more]
KHDR2_DANRE1.725e-1948.60KH domain-containing, RNA-binding, signal transduc... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7ALV8_PHAVU2.523e-12783.12Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
I1MQQ1_SOYBN6.246e-12784.42Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2QY45_GLYSO6.246e-12784.42KH domain-containing protein OS=Glycine soja GN=gl... [more]
K4CSP8_SOLLC9.467e-12783.23Uncharacterized protein OS=Solanum lycopersicum GN... [more]
I1JJZ0_SOYBN1.952e-12683.77Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032377STAR protein, homodimerisation regionPFAMPF16544STAR_dimercoord: 23..71
e-value: 4.2E-14
score: 51.7
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 1..145
NoneNo IPR availablePANTHERPTHR11208:SF59SUBFAMILY NOT NAMEDcoord: 1..145

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092607 ID=g.barbadense_cottongen_reftransV1_0092607; Name=g.barbadense_cottongen_reftransV1_0092607; organism=Gossypium barbadense; type=contig; length=2730bp
CTCTATATTTTTTGAGTTTTTATTTTATTTTCTTTTCTTTCATTTTTCAA
CTCTAACATACAGTCAGTGGATCAGAAGAAATTTATTTTTTCTTTTAATT
TTTCCTACCAAAAAAATTTATTTTACATATTTTTATTTTTCTACCCTTCA
ATTTTTCATCCATCCATTTCTTTTTCCACTCTACTAAGTAAAGCATTCAG
CTATAGATAAAACTTGTATCCAAAATGCTACAGTCCAATTCAAGTAAAAA
TTCAATATCAACATCAATCCTGATACTTTATAGATACAGCCAATTATAAA
AGGATTCAAGTTTCAAGGGCAGGCTTTTAGCATCATTGAATAAACTATCA
CATTGCTAGTTTTCTATTTAGGTTAAATTATTATATTAGTCCCTGTACTT
TACAAAAGTTGTGAATTTATAGTCCCTACACTTTTCAAATTTTAAAATTT
CAGTCACCAAACGATAACTATTAAATTCATTAATTTATGTTTTACTATTT
CCAAAATTTGATGGGACAAACATATTATCATATGTTAACGCACTAAAAAT
CCAGTTAATTGTTTAATGATTGTGATTTATGTTAAGACTAAAATTTTAAA
ATTCGAGAAGAATAGAAACCTAGAATGATCCCAGGGGAGAATATGAACTA
AATCTATAATGGTATGCATAGTACAGACTAGCAATTGAATTTAACTAATC
GGATTTATCTGCAACTTGTACTAAAATTGACCAATTCAAAAAGTAAAAGC
TTAAGAGTACAAAAACTAAATCCACAATTTACATATGGTATAGGGACTAA
TAACATAATTTGACCTATATTTTAACATAGGTAAAAGTGCAAGAGGAAAA
GTAGATAAGATAACCTCCATTGACAAAAGTTCCCAAGGGACAGATCTTTG
AGAATCTTGAATAAATTTACTTCATTGAAGCTATAAAGATACAAATTCCA
TCTGACCACTAAGGGAGGCTTTGAAATGCTTATGCAGGGATAATAACAAT
AATAATAATCTAAATAAAATTTTAACCAACATAAAACGACTGAGAGAGAA
GATGAAGATTCATATGCTAGTATATTGTAGGTCCAACTTAACATTGCTAT
GCTTCTTTCATATAAACTACAAAAGAAAGGAAAGGAGACAAGCAACGGAA
CAACAAATATGACACACCTACAAAACTCAAATCGACCACACCAGGCCTAA
TACTAGCAACATATATATATTCCACACTCCTCAAAGCTCTGCTAACACAA
GAATAAATCCAATGAATGTATTGAGTTTACAGGAAAACTGACCTCACAGA
ACCTAAACTTGAGAGCCATCTATATATTTCTTTTTCTTTGTTCATTTTTG
TTCCTCTTTAGTCCGAAGAGCAAAACAAATTAATAATGAAAAGCCCATCA
GAAAAAGCTCACCAGCAAAAACAGTTAACCTAATATTTTCAAGCTGTGCT
GAATTGATCTGTATCAGAATTCAGAAGGTATACTTTGGCTAAGAAATTCT
GGAGCACGTTGGATCATTTTCAGATGATTTATGGTTAAACTCTCAGTATC
CTGTTTTGGGGCGCTTCATTCCACTGGAATTAAAAGGAGAAACACTACCA
CTTGGACCAGGACTCTCCTCACTGAAATTTGAATTTAGCATTGCCAGTTC
ACGTAGTTGCTGCCTCTTAATAAAATCTTGCGACTCATCCACAGGTTTGA
GTAATTCTTCTATGATTTCCTGCGCCTGTCTAAGCCTTATATCAACAACA
TTAGCAGGTAAATCAGCCTCAATCAAGATGTGGAGAGGATCATTCAGGTG
CTCATATCCAGGCCGACCTCTCAGCTTCTCTTCCTTGTCCGGATCCTTTA
TTGATCCTTTTCCTCTAATGTACACACGGCAGCCAGTAGTAGCTTCCACC
CGCTTTAATGAATTTCCTCTAGGGCCTAGAAGTCGTCCAACAAAATTGAA
CTAACAAGGAAAGACAGACTCTAAACCTCAATACTCACAAAAGAGTTTTC
ATTCAATTGAAATATGAAAAATATAATCAAACAAAACTTAATCTAATGCA
CTAGCATTTTCCATATACAGCTTACGCTTGGATATGTATCAACAGGAATT
TCAAGACGCAAAATCCTCTTCACAGTGTATGAACTAGGGCTTGCTGGGGC
ACCTTGCCAGTCCATTGTCATCCCAGGTGGCCCACTTAGTCTCTCTTGGG
TAAGACTATTCCAGCCGCCCAATCCGGTGCCAGAAACATTTGACATAAGG
TTTGAAGAAGCCATGGGACCGGGGCTTCTATGCCTCAACCGGTCAAAGTC
GCCAAATCCTTGGTTGGCCATCATTCCCGAGACTCGAAATATCTCTTGAT
TTAACAGCCGGCTGCATATAGGAAGGACTTGCATGAAAGGTCCAAGCTTT
TGATGCTCTGCCAACAGTTCTGATAAGTACTGACTGTCAACATCTGGAGT
GGTTCTGATCTGTGGAGAAGCAGCTCTAGCAGGAGAAAAGTTGGAGTTAT
ACAGACCTGACATAGCTTTGCCTTTTGATTTGGGGGATTCAATTCTTTTC
TTTTTTTAAATAAAATGAAAAAATTTTAGTTTTTGAAGAGAAAAAAAATC
AAGTTTGAGCTTCTGGCAGAGAAGAAAGAAGAAAAACACAACACCAAGAG
GGGTGTAATAGGAGGCAACAATATATTTATATATAAAAATGATAAAAAAA
TATTATAAAAAAAAGAAAAAAGAAAAAGAA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR032377STAR_dimer