g.barbadense_cottongen_reftransV1_0092607, g.barbadense_cottongen_reftransV1_0092607 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092607
Unique Nameg.barbadense_cottongen_reftransV1_0092607
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length2730
Homology
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_FELCA (Protein quaking OS=Felis catus GN=QKI PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_CANFA (Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_BOVIN (Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.896e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_CHICK (Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.053e-26
Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +I+L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.585e-26
Identity = 53/105 (50.48%), Postives = 80/105 (76.19%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D  KEE+ RG+P +EHLN+ LH+LI  +   N  +++L++A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   97 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 201
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIA_DANRE (Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 4.550e-24
Identity = 50/105 (47.62%), Postives = 78/105 (74.29%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            +NFVGR+LGPRG + K++EA TGC++ +RG+ S++D  KEE+ RG+P +EHLN+ LH+LI  +      +I++R+A E +++LL P  E +D +K+ QL ELA+L
Sbjct:   96 YNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAIL 200
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: HOW_DROME (Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.335e-24
Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = -1 
Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950
            FNFVGR+LGPRG + K++E  TGC++ +RGKGS++D  KE+  RG+P +EHL+D LH+LI  +   N   ++L QA   +++LL P  E +D +K++QL ELA++
Sbjct:  151 FNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAII 255
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V7B586_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G079200g PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.159e-130
Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+ PDVDSQYLSELLAEHQKLGPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL GPPGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSNPDVDSQYLSELLAEHQKLGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGPPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 212.231 bits (539), Expect = 1.159e-130
Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVV+IRLRQAQEIIEELLKPV+ESQD+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVEIRLRQAQEIIEELLKPVEESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: D7TKY7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0056g00510 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.512e-130
Identity = 135/154 (87.66%), Postives = 144/154 (93.51%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARA SPQIR+TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRL+HRSP PMASSNLMSNVSGTGLGGWN L QERLSGP GMTMDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNHNFSPARAVSPQIRSTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIIRVSGMISNQGFGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWNGLPQERLSGPHGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 211.846 bits (538), Expect = 1.512e-130
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KE+KLRGRPGYEHLNDPLHILIEADLPAN+VD+RLRQAQEIIEELLKPVDESQDFIKRQQLRELA+LNSNF EESPGPSGSVSPFN+SGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEDKLRGRPGYEHLNDPLHILIEADLPANIVDMRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNFREESPGPSGSVSPFNTSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1L6X1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.799e-130
Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+ P+VDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 214.157 bits (544), Expect = 2.799e-130
Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A067FDL3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023068mg PE=4 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.315e-129
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+TPD+  DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156

HSP 2 Score: 214.927 bits (546), Expect = 1.315e-129
Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG
Sbjct:  149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 282
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V4UTE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012376mg PE=4 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.315e-129
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+TPD+  DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156

HSP 2 Score: 214.927 bits (546), Expect = 1.315e-129
Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG
Sbjct:  149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 282
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: C6TMR9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 280.026 bits (715), Expect = 5.732e-129
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+ P+VDS+YLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSNPEVDSRYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQERLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154

HSP 2 Score: 211.46 bits (537), Expect = 5.732e-129
Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEA TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  147 FNFVGRLLGPRGNSLKRVEAITGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1L6X0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.025e-129
Identity = 133/155 (85.81%), Postives = 143/155 (92.26%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQE-RLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+ P+VDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMSNVSGTGLGGWNSL QE RL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSNPEVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWNSLQQEQRLCGAPGMTMDWQSAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 155

HSP 2 Score: 214.157 bits (544), Expect = 6.025e-129
Identity = 129/134 (96.27%), Postives = 132/134 (98.51%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELA+LNSNF EESPGPSGSVSPFNSSGMKR KTG
Sbjct:  148 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELALLNSNFREESPGPSGSVSPFNSSGMKRAKTG 281
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A067FM08_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023068mg PE=4 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 6.237e-128
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+TPD+  DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156

HSP 2 Score: 209.149 bits (531), Expect = 6.237e-128
Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK----EEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK    E+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG
Sbjct:  149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKVSTPEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 286
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V4SV43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012376mg PE=4 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 6.237e-128
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDV--DSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARAASPQIR+TPD+  DSQYLSELLAEHQKLGPF QVLPICSRLL QEIFRVSGMM NQGFGDFDRLRHRSP PMASSNLMSNV+GTGLGGWN L QERL GPPGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAASPQIRSTPDINIDSQYLSELLAEHQKLGPFTQVLPICSRLLTQEIFRVSGMMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 156

HSP 2 Score: 209.149 bits (531), Expect = 6.237e-128
Identity = 128/138 (92.75%), Postives = 132/138 (95.65%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK----EEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDK    E+KLRGRPGYEHLNDPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF E+SPGPSGSVSPFNSSGMKR KTG
Sbjct:  149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKVSTPEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTG 286
[Close]
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A068UCU1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_22 OS=Coffea canephora GN=GSCOC_T00023192001 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.870e-127
Identity = 129/155 (83.23%), Postives = 138/155 (89.03%), Query Frame = -2 
Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513
            MSGLYN NFSPARA SPQIRT  DVDS QYLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM+ NQGFGD DRLRHRSP PMASSNLMSNV+GTG+ GWN L QERLSG PGMTMDWQGAPASPSS+TVKRILRLEIPVD YP+ + + ++L
Sbjct:    1 MSGLYNPNFSPARAVSPQIRTNSDVDSNQYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMIPNQGFGDLDRLRHRSPSPMASSNLMSNVAGTGIAGWNGLPQERLSGTPGMTMDWQGAPASPSSFTVKRILRLEIPVDNYPNFNFVGRLL 155

HSP 2 Score: 218.394 bits (555), Expect = 1.870e-127
Identity = 130/134 (97.01%), Postives = 133/134 (99.25%), Query Frame = -1 
Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950
            FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQD+IKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKRPKTG
Sbjct:  148 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRPKTG 281
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
QKI_HUMAN1.844e-2651.43Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
QKI_HORSE1.844e-2651.43Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]
QKI_FELCA1.844e-2651.43Protein quaking OS=Felis catus GN=QKI PE=2 SV=1[more]
QKI_CANFA1.844e-2651.43Protein quaking OS=Canis familiaris GN=QKI PE=2 SV... [more]
QKI_BOVIN1.844e-2651.43Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1[more]
QKI_RAT1.896e-2651.43Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_CHICK2.053e-2651.43Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2[more]
QKIA_XENLA2.585e-2650.48Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 ... [more]
QKIA_DANRE4.550e-2447.62Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2[more]
HOW_DROME6.335e-2447.62Protein held out wings OS=Drosophila melanogaster ... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7B586_PHAVU1.159e-13087.01Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
D7TKY7_VITVI1.512e-13087.66Putative uncharacterized protein OS=Vitis vinifera... [more]
I1L6X1_SOYBN2.799e-13086.36Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A067FDL3_CITSI1.315e-12985.90Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4UTE7_9ROSI1.315e-12985.90Uncharacterized protein OS=Citrus clementina GN=CI... [more]
C6TMR9_SOYBN5.732e-12985.71Putative uncharacterized protein OS=Glycine max PE... [more]
I1L6X0_SOYBN6.025e-12985.81Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A067FM08_CITSI6.237e-12885.90Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4SV43_9ROSI6.237e-12885.90Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A068UCU1_COFCA1.870e-12783.23Coffea canephora DH200=94 genomic scaffold, scaffo... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032377STAR protein, homodimerisation regionPFAMPF16544STAR_dimercoord: 23..71
e-value: 4.2E-14
score: 51.7
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 1..145
NoneNo IPR availablePANTHERPTHR11208:SF59SUBFAMILY NOT NAMEDcoord: 1..145

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092607 ID=g.barbadense_cottongen_reftransV1_0092607; Name=g.barbadense_cottongen_reftransV1_0092607; organism=Gossypium barbadense; type=contig; length=2730bp
CTCTATATTTTTTGAGTTTTTATTTTATTTTCTTTTCTTTCATTTTTCAA
CTCTAACATACAGTCAGTGGATCAGAAGAAATTTATTTTTTCTTTTAATT
TTTCCTACCAAAAAAATTTATTTTACATATTTTTATTTTTCTACCCTTCA
ATTTTTCATCCATCCATTTCTTTTTCCACTCTACTAAGTAAAGCATTCAG
CTATAGATAAAACTTGTATCCAAAATGCTACAGTCCAATTCAAGTAAAAA
TTCAATATCAACATCAATCCTGATACTTTATAGATACAGCCAATTATAAA
AGGATTCAAGTTTCAAGGGCAGGCTTTTAGCATCATTGAATAAACTATCA
CATTGCTAGTTTTCTATTTAGGTTAAATTATTATATTAGTCCCTGTACTT
TACAAAAGTTGTGAATTTATAGTCCCTACACTTTTCAAATTTTAAAATTT
CAGTCACCAAACGATAACTATTAAATTCATTAATTTATGTTTTACTATTT
CCAAAATTTGATGGGACAAACATATTATCATATGTTAACGCACTAAAAAT
CCAGTTAATTGTTTAATGATTGTGATTTATGTTAAGACTAAAATTTTAAA
ATTCGAGAAGAATAGAAACCTAGAATGATCCCAGGGGAGAATATGAACTA
AATCTATAATGGTATGCATAGTACAGACTAGCAATTGAATTTAACTAATC
GGATTTATCTGCAACTTGTACTAAAATTGACCAATTCAAAAAGTAAAAGC
TTAAGAGTACAAAAACTAAATCCACAATTTACATATGGTATAGGGACTAA
TAACATAATTTGACCTATATTTTAACATAGGTAAAAGTGCAAGAGGAAAA
GTAGATAAGATAACCTCCATTGACAAAAGTTCCCAAGGGACAGATCTTTG
AGAATCTTGAATAAATTTACTTCATTGAAGCTATAAAGATACAAATTCCA
TCTGACCACTAAGGGAGGCTTTGAAATGCTTATGCAGGGATAATAACAAT
AATAATAATCTAAATAAAATTTTAACCAACATAAAACGACTGAGAGAGAA
GATGAAGATTCATATGCTAGTATATTGTAGGTCCAACTTAACATTGCTAT
GCTTCTTTCATATAAACTACAAAAGAAAGGAAAGGAGACAAGCAACGGAA
CAACAAATATGACACACCTACAAAACTCAAATCGACCACACCAGGCCTAA
TACTAGCAACATATATATATTCCACACTCCTCAAAGCTCTGCTAACACAA
GAATAAATCCAATGAATGTATTGAGTTTACAGGAAAACTGACCTCACAGA
ACCTAAACTTGAGAGCCATCTATATATTTCTTTTTCTTTGTTCATTTTTG
TTCCTCTTTAGTCCGAAGAGCAAAACAAATTAATAATGAAAAGCCCATCA
GAAAAAGCTCACCAGCAAAAACAGTTAACCTAATATTTTCAAGCTGTGCT
GAATTGATCTGTATCAGAATTCAGAAGGTATACTTTGGCTAAGAAATTCT
GGAGCACGTTGGATCATTTTCAGATGATTTATGGTTAAACTCTCAGTATC
CTGTTTTGGGGCGCTTCATTCCACTGGAATTAAAAGGAGAAACACTACCA
CTTGGACCAGGACTCTCCTCACTGAAATTTGAATTTAGCATTGCCAGTTC
ACGTAGTTGCTGCCTCTTAATAAAATCTTGCGACTCATCCACAGGTTTGA
GTAATTCTTCTATGATTTCCTGCGCCTGTCTAAGCCTTATATCAACAACA
TTAGCAGGTAAATCAGCCTCAATCAAGATGTGGAGAGGATCATTCAGGTG
CTCATATCCAGGCCGACCTCTCAGCTTCTCTTCCTTGTCCGGATCCTTTA
TTGATCCTTTTCCTCTAATGTACACACGGCAGCCAGTAGTAGCTTCCACC
CGCTTTAATGAATTTCCTCTAGGGCCTAGAAGTCGTCCAACAAAATTGAA
CTAACAAGGAAAGACAGACTCTAAACCTCAATACTCACAAAAGAGTTTTC
ATTCAATTGAAATATGAAAAATATAATCAAACAAAACTTAATCTAATGCA
CTAGCATTTTCCATATACAGCTTACGCTTGGATATGTATCAACAGGAATT
TCAAGACGCAAAATCCTCTTCACAGTGTATGAACTAGGGCTTGCTGGGGC
ACCTTGCCAGTCCATTGTCATCCCAGGTGGCCCACTTAGTCTCTCTTGGG
TAAGACTATTCCAGCCGCCCAATCCGGTGCCAGAAACATTTGACATAAGG
TTTGAAGAAGCCATGGGACCGGGGCTTCTATGCCTCAACCGGTCAAAGTC
GCCAAATCCTTGGTTGGCCATCATTCCCGAGACTCGAAATATCTCTTGAT
TTAACAGCCGGCTGCATATAGGAAGGACTTGCATGAAAGGTCCAAGCTTT
TGATGCTCTGCCAACAGTTCTGATAAGTACTGACTGTCAACATCTGGAGT
GGTTCTGATCTGTGGAGAAGCAGCTCTAGCAGGAGAAAAGTTGGAGTTAT
ACAGACCTGACATAGCTTTGCCTTTTGATTTGGGGGATTCAATTCTTTTC
TTTTTTTAAATAAAATGAAAAAATTTTAGTTTTTGAAGAGAAAAAAAATC
AAGTTTGAGCTTCTGGCAGAGAAGAAAGAAGAAAAACACAACACCAAGAG
GGGTGTAATAGGAGGCAACAATATATTTATATATAAAAATGATAAAAAAA
TATTATAAAAAAAAGAAAAAAGAAAAAGAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR032377STAR_dimer