g.barbadense_cottongen_reftransV1_0092607, g.barbadense_cottongen_reftransV1_0092607 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 3.322e-124 Identity = 131/157 (83.44%), Postives = 143/157 (91.08%), Query Frame = -2 Query: 2052 MSGLYN--SNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN S FSPARAASPQIR+TP++DS QYL+ELLAEHQKL PFMQVLPICSRLLNQE+FRVSGMM+NQGFGDFDRLRHRSP PMASSNLMSNVS TGLGGWN L+QERLSG PGMTMDWQGAP SPSSYTVKRILRLEIPVD YP+ + + ++L Sbjct: 1 MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLL 157 HSP 2 Score: 199.904 bits (507), Expect = 3.322e-124 Identity = 96/105 (91.43%), Postives = 104/105 (99.05%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP+KE+KLRGRPGYEHLN+ LHILIEADLPA++V+IRLRQAQEIIEELLKPVDESQDFIKRQQLRELA+L Sbjct: 150 FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALL 254
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.411e-113 Identity = 122/156 (78.21%), Postives = 138/156 (88.46%), Query Frame = -2 Query: 2052 MSGLYN-SNFSPARAASPQIRT-TPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN +NFSP+RAASPQIRT + DVDSQY+S+LLAEHQKLGPFMQVLPICSRLLNQEIFR++GMM NQGF DFDRLRHRSP PMAS NLMSNVSG GLGGWN L ER+ GP GM M+WQGAPASPSSY VKRILRL++PVDTYP+ + + ++L Sbjct: 1 MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLL 156 HSP 2 Score: 202.216 bits (513), Expect = 1.411e-113 Identity = 117/134 (87.31%), Postives = 128/134 (95.52%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP+KEEKL+G+PGYEHLN+ LHILIEADLP ++VDI+LRQAQEIIEEL+KPVDESQD+IKRQQLRELA+LNSN E SPGPSGSVSPFNS+ MKRPKTG Sbjct: 149 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTG 282
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica GN=SPIN1 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.646e-100 Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTP-DVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLY+ FSPAR SPQIR+ P DVDSQYL+ELLAEHQKLGPFMQVLPICS+LL+QEI RVS ++ N GFGDFDR R RSP PM+S N SN SG G WN L QERL P G +MDWQGAP SPSS+ VK+ILRL++PVD+YP+ + + ++L Sbjct: 1 MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRIL 155 HSP 2 Score: 191.43 bits (485), Expect = 5.646e-100 Identity = 89/105 (84.76%), Postives = 100/105 (95.24%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKGSIKDP KE+KLRG+PGYEHL+DPLHILIEA+ PA+++D RLR AQE+IEELLKPVDESQDF KRQQLRELAML Sbjct: 148 FNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAML 252
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.497e-60 Identity = 93/133 (69.92%), Postives = 111/133 (83.46%), Query Frame = -1 Query: 1552 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKT 1950 FNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KEE +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL P++E+ D K+QQLRELA+LN EE SGSVSP+NS GMKR KT Sbjct: 180 FNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312 HSP 2 Score: 89.3521 bits (220), Expect = 5.497e-60 Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RLLNQEI RV+ ++ N L H P P+AS + N + GW S S P +W +P S S KR +R++IPVD YP+ + + ++L Sbjct: 64 KYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQNARAD-MNGWASQFPSERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLL 187
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana GN=At4g26480 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.725e-60 Identity = 76/105 (72.38%), Postives = 94/105 (89.52%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN+PLHIL+EA+LP +VD RL QA+EI+++LL PV+E+ DF K+QQLRELA+L Sbjct: 174 YNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALL 278 HSP 2 Score: 88.1965 bits (217), Expect = 7.725e-60 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 2052 QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2432 +YLSELLAE KL PF+ VLP RL+NQEI RV+ ++ N + R P P+AS + N S + GW S S +W +P S S VKR +R++IPVD YP+ + + ++L Sbjct: 60 KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLL 181
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.174e-55 Identity = 69/105 (65.71%), Postives = 87/105 (82.86%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 +NFVGR+LGPRGNSLKRVE T CRV+IRG+GS+KD KEEKL+G+PGYEHL +PLH+LIEA+LP ++++ RL A +E LLKP+DES D KR+QL+ELA L Sbjct: 161 YNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAAL 265 HSP 2 Score: 90.5077 bits (223), Expect = 2.174e-55 Identity = 60/151 (39.74%), Postives = 79/151 (52.32%), Query Frame = -2 Query: 2052 ASPQIRTTPDVDSQ-YLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGT-GLGGWNSLTQER---------LSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2471 ASP P D + YL+ELL E QKLGPF+QV+P C RLLN EI RVS F D DR H SP +L +G L GW+ + E GP + W G P P+ VK+++RL++PVD YPS + + ++L Sbjct: 30 ASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSP----FRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGP--SPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRIL 168
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_DANRE (Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.067e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKIB_XENLA (Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.393e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 97 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 201
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.844e-26 Identity = 54/105 (51.43%), Postives = 80/105 (76.19%), Query Frame = -1 Query: 1636 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAML 1950 FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KEE+ RG+P +EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+L Sbjct: 96 FNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAIL 200
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: V7ALV8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G059400g PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.523e-127 Identity = 128/154 (83.12%), Postives = 142/154 (92.21%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQKLGPFMQ LPIC+RLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+G+GLGGWNSL QERL G PGMTMDWQ APASPSS+TVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKLGPFMQALPICTRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGSGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSFTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 210.69 bits (535), Expect = 2.523e-127 Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPAN+VDIRLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1MQQ1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 6.246e-127 Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQK GPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKFGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 206.838 bits (525), Expect = 6.246e-127 Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPANVVD+RLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: A0A0B2QY45_GLYSO (KH domain-containing protein OS=Glycine soja GN=glysoja_014171 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 6.246e-127 Identity = 130/154 (84.42%), Postives = 141/154 (91.56%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQK GPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGMTMDWQ APASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKFGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 154 HSP 2 Score: 206.838 bits (525), Expect = 6.246e-127 Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPANVVD+RLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANVVDLRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: K4CSP8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc09g031930.2 PE=4 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 9.467e-127 Identity = 129/155 (83.23%), Postives = 140/155 (90.32%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYN NFSPARAASPQIR+TPDVDS YLSELLAEHQKLGPFMQVLPICSRLLNQEI RVSGM+ NQGFG+ DRLRHRSP PM S+NLMSNV+G GL GWN L QERLSGPPGM+MDWQGAPASPSSYTVKRILRLEIPVDTYP+ + + ++L Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSNHYLSELLAEHQKLGPFMQVLPICSRLLNQEILRVSGMLPNQGFGELDRLRHRSPSPMGSANLMSNVTGAGLSGWNGLPQERLSGPPGMSMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLL 155 HSP 2 Score: 213.001 bits (541), Expect = 9.467e-127 Identity = 127/134 (94.78%), Postives = 133/134 (99.25%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDPDKEEKLRGRPGYEHLN+PLHILIEADLPA+VVDIRLRQAQEIIEELLKPVDES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFN+SGMKRPKTG Sbjct: 148 FNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPASVVDIRLRQAQEIIEELLKPVDESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNTSGMKRPKTG 281
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Match: I1JJZ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.952e-126 Identity = 129/154 (83.77%), Postives = 140/154 (90.91%), Query Frame = -2 Query: 2052 MSGLYNSNFSPARAASPQIRTTPDVDSQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFRVSGMMANQGFGDFDRLRHRSPGPMASSNLMSNVSGTGLGGWNSLTQERLSGPPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPSVSCIWKML 2513 MSGLYNSNFSP RAASPQIRT P+VDSQYL+ELLAEHQKLGPFMQ LPICSRLLNQEI RVSGM++NQGFGDFDRLRHRSP PMASSNLMS+V+GTGLGGWNSL QERL G PGM MDWQ APASPSSYTVKRILRLEIPVD YP+ + + ++L Sbjct: 1 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKLGPFMQALPICSRLLNQEILRVSGMLSNQGFGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWNSLQQERLRGTPGMAMDWQVAPASPSSYTVKRILRLEIPVDAYPNFNFVGRLL 154 HSP 2 Score: 207.223 bits (526), Expect = 1.952e-126 Identity = 125/134 (93.28%), Postives = 131/134 (97.76%), Query Frame = -1 Query: 1549 FNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNDPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESQDFIKRQQLRELAMLXXXXXXXXXXXXXXXXXXXXXGMKRPKTG 1950 FNFVGRLLGPRGNSLKRVEA+TGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLN+ LHILIEADLPAN+VDIRLRQAQEIIEELLKPV+ES+D+IKRQQLRELAMLNSNF EESPGPSGSVSPFNSSGMKR KTG Sbjct: 147 FNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEQLHILIEADLPANIVDIRLRQAQEIIEELLKPVEESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTG 280 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092607 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092607 ID=g.barbadense_cottongen_reftransV1_0092607; Name=g.barbadense_cottongen_reftransV1_0092607; organism=Gossypium barbadense; type=contig; length=2730bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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