g.barbadense_cottongen_reftransV1_0092162, g.barbadense_cottongen_reftransV1_0092162 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092162
Unique Nameg.barbadense_cottongen_reftransV1_0092162
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1901
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
At13chromosomeg.barbadense_cottongen_reftransV1_0092162:1..1901 .
At13:49157042..49164260 -
n/a
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS2_SOLLC (Galactinol synthase 2 OS=Solanum lycopersicum GN=GOLS2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.841e-12
Identity = 70/279 (25.09%), Postives = 111/279 (39.78%), Query Frame = -2
Query:  317 AYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQ------------------------------------LSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVF-IWWHRLPFQVNFLKDFEGEEGRRQEKI-LDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1024
            AY T L  + DY  G V L + + +  S   L++    ++  E    L   G   R I  +  P        ++   N+S LRIW    Y K++++D D+ VF+NID LF  P                                         P     FN G+ V EPSL  ++DL+  +        + Q +LN  F   +  +P   N +        R  E + L+++ V+H+   G KPW  Y   + N D+E ++        +KWW +YD+
Sbjct:   25 AYVTFLAGNGDYWKGVVGLVKGLRKAKSAYPLVVACLPDVPEEHRRILINQGCIVREIEPVYPPHNQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKVGYCQQCPDKVQWTEDLGPKPSLYFNAGMFVYEPSLSTYDDLLKTLKVTPPTPFAEQDFLNMYFRDVYKPIPNDYNLVL---AMLWRHPENVDLEKVKVVHYCAAGSKPWR-YTGKEENMDREDIKMLI-----KKWWDIYDD 294          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLSA_ARATH (Galactinol synthase 10 OS=Arabidopsis thaliana GN=GOLS10 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.639e-12
Identity = 72/283 (25.44%), Postives = 116/283 (40.99%), Query Frame = -2
Query:  317 KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQL--------------SAAPNDKT-----------------------LFNYGVMVIEPSLCMFEDLM--VKVLEMDSY-NGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1030
            K AY T L  ++DY  G V LA+ + +  +   L++    ++  E    L A G   R I  +  P        ++   N+S LRIW    Y+K++++D D+ VF+NID LF  P                S  P  K                         FN G++V EP+L  +EDL+  V+V    S+         N V     R P  ++                LD+I+V+H+   G KPW  +   + + D+E ++        +KWW +Y++
Sbjct:   24 KRAYVTFLAGNQDYWMGVVGLAKGLRKVKAAYPLVVAMLPDVPKEHRQILVAQGCIIREIEPVYPPENQAGYAMAYYVINYSKLRIWEFVEYEKMIYLDGDIQVFSNIDHLFDTPSGYLYAVKDCFCEGSWSKTPQYKIGYCQQSPEKVRWPMNSLGHVPPLYFNAGMLVFEPNLLTYEDLLQTVQVTTPTSFAEQPIPSTYNLVLAMLWRHPECID----------------LDQINVVHYCAKGSKPWR-FTGEEEHMDREDIKMLV-----KKWWDIYED 284          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLG2_YEAS7 (Glycogenin-2 OS=Saccharomyces cerevisiae (strain YJM789) GN=GLG2 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.947e-9
Identity = 70/274 (25.55%), Postives = 120/274 (43.80%), Query Frame = -2
Query:  386 QKEAYATVLHTSEDYVCGAVALA---QSIIRTNSTRDLILL--------HDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPL---------------RIWMLTWYDKVVFIDADVLVFNN--IDWLFVFP-----QLSAAPND--KTLFNYGVMVIEPSLCM---FEDLMVKVLEMDSYNGSYQGWLNEVF-----------------IWWHRLPFQVNFLKDFEGEEGRRQEKILDE-ISVLHFLG-LKPWM-CYRDYDCNW 1033
            +K A  T+L+ S DY+ GA+ LA   Q +++     D I L         ++   P+ +  +++   +  +I     P  D++   E N + L               R+W L  +D+V+F+DAD L  N    + L ++P     Q++A P+     +FN GV+++ P L M    +D ++K + +D   G+ QG  N+ F                 + W RLPF  N      G +         + I ++HF+G  KPW     DYD ++
Sbjct:    3 KKVAICTLLY-SRDYLPGALTLAYQLQKLLKHAVVEDEITLCLLIEKKLFEDEFKPQEIALIRSLFKEIIII----EPLKDQEKSIEKNKANLELLKRPELSHTLLKARLWELVQFDQVLFLDADTLPLNKDFFEILRLYPEQTRFQIAAVPDIGWPDMFNTGVLLLIPDLDMATSLQDFLIKTVSID---GADQGIFNQFFNPICNYSKEVLHKVSPLMEWIRLPFTYNVTMPNYGYQSSPAMNFFQQHIRLIHFIGTFKPWSRNTTDYDDHY 268          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: YR707_MIMIV (Uncharacterized protein R707 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R707 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 6.707e-9
Identity = 61/235 (25.96%), Postives = 110/235 (46.81%), Query Frame = -2
Query:  416 AYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWN------FSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSA------------------APNDKTL--FNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSY----QGWLNEVFI-WWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHF-LGLKPW 1024
            AY TV++ +  Y+ GA+ L  ++ +TN+  D ++L  ++++ E    LK   + T +I+ I     ++D F E N      F+ L    LT YDK++ +D D+++  NID LF     +A                    N K +   N G+M++EP    +ED+   +++ +++ G +    Q +L+  +   W  + F  NF         ++    +D I V+HF    KPW
Sbjct:    5 AYVTVIYGNNIYLTGALVLGYTLQQTNTKYDRVILATKDVSEEYRSYLKK--YYTHIID-IDYVKVNEDIFLEENTRFHDVFTKLSCLSLTQYDKIILLDLDMIIAKNIDHLFKLSAPAACLKRFHIPYGQKIPPKMICSNGKLVGSINAGLMLLEPDKREWEDIKKDIVK-ENFIGKFKYPEQDYLSLRYCNKWTSITFNYNFQFGL-THRVKKYHYTIDNIYVIHFSSSYKPW 234          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLG2_YEAST (Glycogenin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLG2 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 9.486e-9
Identity = 73/272 (26.84%), Postives = 118/272 (43.38%), Query Frame = -2
Query:  386 QKEAYATVLHTSEDYVCGAVALA---QSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLING------IRSPFADKDSFNEWNFSPL---------------RIWMLTWYDKVVFIDADVLVFNN--IDWLFVFP-----QLSAAPND--KTLFNYGVMVIEPSLCM---FEDLMVKVLEMDSYNGSYQGWLNEVF-----------------IWWHRLPFQVNFLKDFEGEEGRRQEKILDE-ISVLHFLG-LKPWM-CYRDYDCNW 1033
            +K A  T+L+ S DY+ GA+ LA   Q +++     D I L    +  + L G +    +  LI        I  P  D++   E N + L               R+W L  +D+V+F+DAD L  N    + L ++P     Q++A P+     +FN GV+++ P L M    +D ++K + +D   G+ QG  N+ F                 + W RLPF  N      G +         + I ++HF+G  KPW     DYD ++
Sbjct:    3 KKVAICTLLY-SRDYLPGALTLAYQLQKLLKHAVVEDEITLC--LLIEKKLFGDEFKPQEIALIRSLFKEIIIIEPLKDQEKSIEKNKANLELLKRPELSHTLLKARLWELVQFDQVLFLDADTLPLNKEFFEILRLYPEQTRFQIAAVPDIGWPDMFNTGVLLLIPDLDMATSLQDFLIKTVSID---GADQGIFNQFFNPICNYSKEVLHKVSPLMEWIRLPFTYNVTMPNYGYQSSPAMNFFQQHIRLIHFIGTFKPWSRNTTDYDDHY 268          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A078HT57_BRANA (BnaA09g15580D protein OS=Brassica napus GN=BnaA09g15580D PE=4 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 264/508 (51.97%), Postives = 358/508 (70.47%), Query Frame = -2
Query:  173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690
            P  ++  R L L+++ + +KK ++IG +NI   E   ++  G S++  VHV  D + +   W   FP  IDE    CPEIP+P  E    D+DV+VAK+PC GWS   G+RDVF LQVNL  AN+ V+SG    +V   VY VFVGSCGPM EIF+C++ +R+V+D+ VYKP L RLKQ +LMP GSC +A P+ + G+EAWR  + D+    +   +  + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD +IT  SL+GL +AGW+ RLI  IRSPFA+KDS+NEWN+S LR+W +T YDK++FIDAD +V   +D LF +PQLSAA NDK LFN G+M++EPS C+F+DLM K  +++SYNG  QG+LNE+F+WWHRL  +VN +K F+ E  +    + D++  +H+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M E L+ YCGL + M +R++KWR IA +   PD HW+I V DPR+ NL
Sbjct:   56 PVVSKNPRWLRLVRDYLPAKK-LRIGFLNIEEQERESFEANGPSIMENVHVSLDPLPESLTWNSLFPEWIDEENSQCPEIPLPKPEGSNADVDVIVAKVPCDGWSENKGLRDVFRLQVNLAAANLAVKSGLT--KVDSTVYVVFVGSCGPMHEIFKCDERVRRVDDYWVYKPNLPRLKQKLLMPVGSCHVASPFAQLGQEAWRPKNKDN----LTSVAIRKHRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMILLHDRSITNRSLIGLSSAGWNLRLIERIRSPFAEKDSYNEWNYSKLRVWQVTDYDKLLFIDADFIVVKKLDHLFYYPQLSAAGNDKVLFNSGIMIVEPSACLFKDLMEKSSKIESYNGGDQGFLNEIFVWWHRLSKRVNTMKYFD-ENFKGTRNLPDDLEGVHYLGLKPWVCYRDYDCNWDMSLRRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKKMKYRIEKWRKIAENDSLPDRHWEIEVKDPRKNNL 555          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A078E3Y1_BRANA (Hexosyltransferase OS=Brassica napus GN=BnaC09g16160D PE=3 SV=1)

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 264/508 (51.97%), Postives = 359/508 (70.67%), Query Frame = -2
Query:  173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690
            P  ++  R L L+++ + +KK +++G +NI   E   ++  G S++  VHV  D + +   W   FP  IDE    CPEIP+P  E    D+DV+VAK+PC GWS   G+RDVF LQVNL  AN+ V+SG    +V  AVY VFVGSCGPM EIF+C++ +R+V+D+ VYKP L RLKQ +LMP GSC +A P+ + G+EAWR  + D+    +   +  + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD +IT  SL GL +AGW+ RLI+ IRSPFA+KDS+NEWN+S LR+W +T YDK++FIDAD +V   +D LF +PQLSAA NDK LFN G+M++EPS C+F+DLM K  +++SYNG  QG+LNE+F+WWHRL  +VN +K F+ E  +    + D++  +H+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M E L+ YCGL + M +R++KWR IA +   PD HW+I V DPR+ NL
Sbjct:   56 PVVSKNPRWLRLVRDYLPAKK-LRVGFLNIEEQERESFEANGPSILENVHVSLDPLPESLTWNSLFPEWIDEENSQCPEIPLPKPEGSNADVDVIVAKVPCSGWSENKGLRDVFRLQVNLAAANLAVKSGLT--KVDSAVYVVFVGSCGPMHEIFKCDERVRRVDDYWVYKPNLPRLKQKLLMPVGSCHVASPFAQLGQEAWRPKNKDN----LTSVAIRKHRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMILLHDRSITNRSLNGLSSAGWNLRLIDRIRSPFAEKDSYNEWNYSKLRVWQVTDYDKLLFIDADFIVVKKLDHLFYYPQLSAAGNDKVLFNSGIMIVEPSACLFKDLMEKSSKIESYNGGDQGFLNEIFVWWHRLSKRVNTMKYFD-ENFKGTRDLPDDLEGVHYLGLKPWVCYRDYDCNWDMSLRRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKKMKYRIEKWRKIAENDSLPDRHWEIEVKDPRKNNL 555          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: R0I860_9BRAS (Hexosyltransferase OS=Capsella rubella GN=CARUB_v10021810mg PE=3 SV=1)

HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0
Identity = 261/508 (51.38%), Postives = 359/508 (70.67%), Query Frame = -2
Query:  173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690
            P  +Q  + L L+++ +  KK I++G +N+   E   Y+  G S++  VHV  D + +   W+  +P  I+E   NCPEIP+P L+    D+DV+VA++PC GWS   G+RDVF LQVNL VAN+ V+SG     V   VY VF+GSCGPM EIF+C++ +R+V+D+ VYKP + RLKQ +LMP GSC++A P+ + G+EAWR  +      +       + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD  IT  SL+GL AAGW+ RLI+ IRSPF+ KDS+NEWN+S LR+W +T YDK+VFIDAD ++   +D LF +PQLSA+ NDK LFN G+MV+EPS CMF+DLM K  +++SYNG  QG+LNE+F+WWHRLP +VN +K F+ E+ +R   + + +  +H+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M + L+ YCGL ++M  R++KWR IA +   PD HW+I V DPR+ NL
Sbjct:   51 PQVSQNPKWLRLVRDYLPGKK-IQVGFLNLEEKERESYEARGPSILKNVHVSLDPLPENVTWKSLYPEWINEEVSNCPEIPLPKLQGSDVDVDVIVARVPCDGWSENKGVRDVFRLQVNLAVANLAVQSGMAMGRVDATVYVVFIGSCGPMHEIFKCDERVRRVDDYWVYKPYIPRLKQKLLMPVGSCRIAPPFAQFGQEAWRPKTDVKLASEASIALPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNRSLIGLSAAGWNLRLIDRIRSPFSKKDSYNEWNYSKLRVWQVTDYDKLVFIDADFIILKKLDHLFYYPQLSASGNDKVLFNSGIMVLEPSECMFKDLMEKSFKIESYNGGDQGFLNEIFVWWHRLPKRVNTMKYFD-EKSQRTHDLPENLEGVHYLGLKPWVCYRDYDCNWDMSARRVFASDSVHEKWWKVYDKMSDQLKGYCGLNKNMEKRIEKWRRIAENSSLPDRHWEIEVRDPRKKNL 556          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: D7U201_VITVI (Hexosyltransferase OS=Vitis vinifera GN=VIT_14s0128g00420 PE=3 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 272/503 (54.08%), Postives = 354/503 (70.38%), Query Frame = -2
Query:  173 LDLLQEEINSKKEIKIGLVNINSNEEIQYQLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ----NCPEIPMPALEKYQDLDVVVAKLPCKGW--SGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1663
            L +  +E+N ++ +KIGLVN+   +  +      +   VHV FDRV+   KW D FP  IDE+Q+     CP+IPMP LE Y+DLDVVVA++PC      G+ G+RDVF +QVNLVVAN+ V+SG    ++ + V  VFVGSCGPM+EIFRC+DL+   ED+ VY+P+LR+LK  ++MP GSCQLA PY E GKE WR + +       L Y+  + +EAYAT+LH+SE YVCGA+ALAQSI +T ST+DL+LL D +IT  SL GL+AAGW  + I  IRSP A K+++NEWN+S LR+W LT YDK++FIDAD +V NN+D LFV+PQLSA  N++ LFN G+MV+EPS CMF+ LM K   M SYNG  QG+LNEVF WWHR P ++NFLK F   + + + +I   +  +H+LG+KPWMCYRDYDCNWDK     FASD AH +WW+VYD MPE L  YCGLT+  + R++KWR IA+     D HWK+ V DPRQ  L
Sbjct:   49 LGIASKELNGRR-VKIGLVNVGDQDFGELY---GLRDQVHVPFDRVAGDVKWGDLFPEWIDEDQKWAAPRCPDIPMPRLELYEDLDVVVARVPCGHGVVEGRKGVRDVFRVQVNLVVANLAVKSGLTRGDIDQTVIVVFVGSCGPMREIFRCDDLVEHGEDYWVYRPDLRKLKHKLVMPVGSCQLAPPYAEFGKERWRRYIS-QSTPSSLNYAINKPREAYATILHSSEAYVCGAIALAQSITQTGSTKDLVLLADNSITSRSLQGLRAAGWKIKHIERIRSPNAKKNAYNEWNYSKLRLWQLTEYDKIIFIDADFIVLNNMDSLFVYPQLSAVGNNRVLFNSGIMVVEPSECMFQTLMEKSQTMVSYNGGDQGFLNEVFTWWHRWPRRLNFLKIF---KEKNEHEIPANVYAIHYLGVKPWMCYRDYDCNWDKLDHHPFASDSAHRRWWEVYDAMPEGLWGYCGLTKKKDERIRKWRKIAQKKNLSDGHWKMEVRDPRQKML 543          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: W8PV93_ARATH (Hexosyltransferase (Fragment) OS=Arabidopsis thaliana GN=AT1G54940 PE=2 SV=1)

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 260/489 (53.17%), Postives = 349/489 (71.37%), Query Frame = -2
Query:  173 KKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1633
            +K I++G +NI+  E   Y+  G +V   +HV  D + K   W+  +P  I+E    CPEIP+P  E    ++DV+VA++PC GWS   G+RDVF LQVNL  AN+ V+SG  T  V +AVY VF+GSCGPM EIF C++ + +VED+ VYKP L RLKQ +LMP GSCQ+A  + + G+EAWR    D+   K +     + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD  IT +SL+GL AAGW+ RLI+ IRSPF+ KDS+NEWN+S LR+W +T YDK+VFIDAD ++   +D LF +PQLSA+ NDK LFN G+MV+EPS CMF+DLM K  +++SYNG  QG+LNE+F+WWHRL  +VN +K F+ E+  R+  + + +  LH+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M E L+ YCGL ++M  R++KWR IA++   PD HW+I V DPR+ NL
Sbjct:   69 EKRIQVGFLNIDEKERESYEARGPLVLKNIHVPLDHIPKNVTWKSLYPEWINEEASTCPEIPLPQPEGSDANVDVIVARVPCDGWSANKGLRDVFRLQVNLAAANLAVQSGLRT--VNQAVYVVFIGSCGPMHEIFPCDERVMRVEDYWVYKPYLPRLKQKLLMPVGSCQIAPSFAQFGQEAWRPKHEDNLASKAVTALPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNKSLIGLSAAGWNLRLIDRIRSPFSQKDSYNEWNYSKLRVWQVTDYDKLVFIDADFIILKKLDHLFYYPQLSASGNDKVLFNSGIMVLEPSACMFKDLMEKSFKIESYNGGDQGFLNEIFVWWHRLSKRVNTMKYFD-EKNHRRHDLPENVEGLHYLGLKPWVCYRDYDCNWDISERRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKNMEKRIEKWRRIAKNNSLPDRHWEIEVRDPRKTNL 554          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A5CAD0_VITVI (Hexosyltransferase OS=Vitis vinifera GN=VITISV_042631 PE=3 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 271/503 (53.88%), Postives = 353/503 (70.18%), Query Frame = -2
Query:  173 LDLLQEEINSKKEIKIGLVNINSNEEIQYQLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ----NCPEIPMPALEKYQDLDVVVAKLPCKGW--SGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1663
            L +  +E+N ++ +KIGLVN+   +  +      +   VHV FDRV+   KW D FP  IDE+Q+     CP+IPMP LE Y+DLDVVVA++PC      G+ G+RDVF +QVNLVVAN+ V+SG    ++ + V  VFVGSCGPM+EIFRC+DL+   ED+ VY+P+LR+LK  ++MP GSCQLA PY E GKE WR + +       L Y+  + +EAYAT+LH+SE YVCGA+ALAQSI +T ST+DL+LL D +IT  SL GL+AAGW  + I  IRSP A K+++NEWN+S LR+W LT YDK++FIDAD +V NN+D LFV+PQLSA  N++ LFN G+MV+EPS CMF+ LM K   M SYNG  QG+LNEVF WWHR P ++NFLK F   + + + +    +  +H+LGLKPWMCYRDYDCNWD+     FASD AH +WW+VYD MPE L  YCGLT+  + R++KWR IA+     D HWK+ V DPRQ  L
Sbjct:   49 LGIASKELNGRR-VKIGLVNVGDQDFGELY---GLRDQVHVPFDRVAGDVKWGDLFPEWIDEDQKWAAPRCPDIPMPRLELYKDLDVVVARVPCGDGVVEGRKGVRDVFRVQVNLVVANLAVKSGLTRGDIDQTVIVVFVGSCGPMREIFRCDDLVEHGEDYWVYRPDLRKLKHKLVMPVGSCQLAPPYAEFGKERWRRYIS-QSTPSSLNYAINKPREAYATILHSSEAYVCGAIALAQSITQTGSTKDLVLLADNSITSRSLQGLRAAGWKIKHIERIRSPNAKKNAYNEWNYSKLRLWQLTEYDKIIFIDADFIVLNNMDSLFVYPQLSAVGNNRVLFNSGIMVVEPSECMFQTLMEKSQTMVSYNGGDQGFLNEVFTWWHRWPRRLNFLKIF---KEKNEHETPANVYAIHYLGLKPWMCYRDYDCNWDRLDHHPFASDSAHRRWWEVYDAMPEGLWGYCGLTKKKDERIRKWRKIAQKKNLSDGHWKMEVRDPRQKML 543          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: M4EGP0_BRARP (Hexosyltransferase OS=Brassica rapa subsp. pekinensis GN=Bra027954 PE=3 SV=1)

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 263/508 (51.77%), Postives = 357/508 (70.28%), Query Frame = -2
Query:  173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALE-KYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690
            P  ++  R L L+++ + +KK ++IG +NI   E   ++  G S++  VHV  D +     W   FP  IDE    CPEIP+P  E    D+DV+VAK+PC GWS   G+RDVF LQVNL  AN+ V+SG    +V   VY VFVGSCGPM EIF+C++ +R+V+D+ VYKP L RLKQ +LMP GSC +A P+ + G+EAWR  + D+    +   +  + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD +IT  SL+GL +AGW+ RLI+ IRSPFA+KDS+NEWN+S LR+W +T YDK++FIDAD +V   +D LF +PQ SAA NDK LFN G+M++EPS C+F+DLM K  +++SYNG  QG+LNE+F+WWHRL  +VN +K F+ E  +    + D++  +H+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M E L+ YCGL + M +R++KWR IA +   PD HW+I V DPR+ NL
Sbjct:   43 PVVSKNPRWLRLVRDYLPAKK-LRIGFLNIEEQERESFEANGPSIMENVHVSLDPLPVSLTWNSLFPEWIDEENSQCPEIPLPKPEGSSADVDVIVAKVPCDGWSENKGLRDVFRLQVNLAAANLAVKSGLT--KVDSTVYVVFVGSCGPMHEIFKCDERVRRVDDYWVYKPNLPRLKQKLLMPVGSCHVASPFAQLGQEAWRPKNKDN----LTSVAIRKHRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMILLHDRSITNRSLIGLSSAGWNLRLIDRIRSPFAEKDSYNEWNYSKLRVWQVTDYDKLLFIDADFIVVKKLDHLFYYPQFSAAGNDKVLFNSGIMIVEPSACLFKDLMEKSSKIESYNGGDQGFLNEIFVWWHRLSKRVNTMKYFD-ENFKGTRDLPDDLEGVHYLGLKPWVCYRDYDCNWDMSLRRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKKMKYRIEKWRKIAENDSLPDRHWEIEVKDPRKNNL 542          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A0D3E5V7_BRAOL (Hexosyltransferase OS=Brassica oleracea var. oleracea GN=PGSIP4 PE=3 SV=1)

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 264/508 (51.97%), Postives = 358/508 (70.47%), Query Frame = -2
Query:  173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPG-SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690
            P  ++  R L L+++ + +KK ++IG +NI   E   ++  G S++  VHV  D + +   W   F   IDE    CPEIP+P  E    D+DV+VAK+PC GWS   G+RDVF LQVNL  AN+ V+SG    +V  AVY VFVGSCGPM  IF+C++ +R+V+D+ VYKP L RLKQ +LMP GSC +A P+ + G+EAWR  + D+    +   +  + + AY TVLH+SE YVCGA+ALAQSI ++ S +D+ILLHD +IT  SL+GL +AGW+ RLI+ IRSPFA+KDS+NEWN+S LR+W +T YDK++FIDAD +V   +D LF +PQLSAA NDK LFN G+M++EPS C+F+DLM K  +++SYNG  QG+LNEVF+WWHRL  +VN +K F+ E  +    + D++  +H+LGLKPW+CYRDYDCNWD    + FASD  HEKWW+VYD+M E L+ YCGL + M +R++KWR IA +   PD HW+I V DPR+ NL
Sbjct:   43 PVVSKNPRWLRLVRDYLPAKK-LRIGFLNIEEQERESFEANGPSILENVHVSLDPLPENLTWNSLFMEWIDEENSQCPEIPLPKPEGSNADVDVIVAKVPCSGWSENEGLRDVFRLQVNLAAANLAVKSGLT--KVDSAVYVVFVGSCGPMHGIFKCDERVRRVDDYWVYKPNLPRLKQKLLMPVGSCHVASPFAQLGQEAWRPKNKDN----LTSVAIRKHRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMILLHDRSITNRSLIGLSSAGWNLRLIDRIRSPFAEKDSYNEWNYSKLRVWQVTDYDKLLFIDADFIVVKKLDHLFYYPQLSAAGNDKVLFNSGIMIVEPSACLFKDLMEKSSKIESYNGGDQGFLNEVFVWWHRLSKRVNTMKYFD-ENFKGTRDLPDDLEGVHYLGLKPWVCYRDYDCNWDMSLRRVFASDSVHEKWWKVYDKMSEQLKGYCGLNKKMKYRIEKWRKIAENDSLPDRHWEIEVKDPRKNNL 542          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: B9I7T4_POPTR (Hexosyltransferase (Fragment) OS=Populus trichocarpa GN=POPTR_0013s02380g PE=3 SV=2)

HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0
Identity = 279/501 (55.69%), Postives = 349/501 (69.66%), Query Frame = -2
Query:  173 LDLLQEEINSKKEIKIGLVNINSNEEIQYQLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDEN----QQNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1663
             D L E+    + IKIGLVN++ + +  Y      V TV V F  VSK+ KWE FFP  IDE+    Q +CPE+PMP L+ Y+DLDV++A++PC   S K G+RDVF LQVNLVVAN++V +G       R VY VF+GSCGPMQEIFRC+DL+ ++ D+ VYKPELRRL+Q + MP GSCQ+A P G                                TV+H+SE YVCGA+ALAQSII+ NST DL+LLHD +++PESL GL+AAGW T+LI  IRSPFA KDS+NEWN+S LR+W LT YDKVVFIDAD++V  NID  F +PQLSAAPNDK LFN G+MVIEPS C+FED+M K  ++ SYNG  QG+LNE F WWHRLP ++N+LK F+  +G    ++      +HFLGLKPW CY+DYDCNWD      FASD AH++WWQVYD MP+ LQ YCGLT+HM+ R++KWR  A++   PD HWKI V DPRQY+L
Sbjct:   31 FDGLIEKKTDSEPIKIGLVNVDDHVKHAYDRMHGQVETVSVDFRPVSKELKWESFFPEWIDEDARWHQPSCPEVPMPRLDDYRDLDVILARVPCGSGSEKQGIRDVFRLQVNLVVANLVVANGLTKGGGDRKVYVVFMGSCGPMQEIFRCDDLMTRLGDYWVYKPELRRLRQKVQMPVGSCQIA-PLGR-----------------------------LLTVIHSSEAYVCGAIALAQSIIQNNSTNDLVLLHDSSLSPESLCGLRAAGWKTKLIQPIRSPFARKDSYNEWNYSKLRLWQLTDYDKVVFIDADLIVLKNIDKFFAYPQLSAAPNDKVLFNSGIMVIEPSTCLFEDMMSKRNKLLSYNGGDQGFLNEAFTWWHRLPTRLNYLKIFK-NQGNPDHEMQKGPYTIHFLGLKPWACYKDYDCNWDMVDRHIFASDSAHKRWWQVYDAMPKKLQQYCGLTKHMDARIRKWRGKAKNASLPDGHWKINVKDPRQYHL 500          
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: V7BM51_PHAVU (Hexosyltransferase OS=Phaseolus vulgaris GN=PHAVU_006G092200g PE=3 SV=1)

HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0
Identity = 277/522 (53.07%), Postives = 361/522 (69.16%), Query Frame = -2
Query:  176 HNPPPSNQRFRNLDLLQEEINSKKEIKIGLVNINSN------EEIQYQLPGSVVSTVHVRFDRVSKKRKWEDFFPFRIDEN----QQNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTP--EVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNST--RDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYN 1699
            H P PS   F   DL+ + +N++K++K+GLVNI++       EE++  L G V S V V FD V    KWE+ FP  IDEN    +  CP IPMP LE ++DL+ VVAK+PC       G+RDVF LQVNLVVAN+ V SGW+       R VY VFVGSCGPM+EIFRC++LL+  + + VYKP+L  LKQ  LMP GSCQ+A  Y +TGKE WR                   K AY ++LH+SE YVCGA+ALAQSI++ N+    +L+LL D++I PES+ GLKAAGW  + +  I SPFA + ++N+WN+S LR+W LT YDK++FID+D+++ NN+D LFV+PQLSAAPN+K LFN G+MVIEPS C+F+ +M K LE+ SYNG  QG+LNE+F WWHRLP +VN LK F  E+ +R+  + +++  +H+LGLKPWMCYRDYDCNWD +    FASD AH++WWQVYD MPE LQ YCGLT+ MN R+ KWR IA +    D HWK+ V DPR+ N
Sbjct:   50 HKPRPSPPWF---DLIGKGLNNRKKVKVGLVNIDARDDGDVYEELE-SLEGKVES-VFVDFDHVDGNLKWEEIFPEWIDENGKWGEAKCPRIPMPKLENFEDLNAVVAKVPC-------GVRDVFRLQVNLVVANLAVRSGWLNKMENHHRNVYVVFVGSCGPMEEIFRCDNLLKHEQQYWVYKPDLWTLKQKTLMPVGSCQIASDYAKTGKEIWRNFLG-------------VPKLAYVSILHSSEAYVCGAIALAQSILQANTNFPNNLLLLVDKSIGPESITGLKAAGWKIQRMKRIFSPFAKRGAYNQWNYSKLRMWQLTTYDKIIFIDSDLVLLNNLDHLFVYPQLSAAPNEKVLFNSGLMVIEPSQCIFQKMMNKTLEVRSYNGGDQGFLNEIFTWWHRLPAKVNQLKTFHSEDQKRE--VPEDVYAIHYLGLKPWMCYRDYDCNWDMQNHHIFASDSAHKRWWQVYDAMPEELQSYCGLTQKMNERIVKWRRIAGNSSLSDGHWKMKVEDPRKGN 544          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
GOLS2_SOLLC5.841e-1225.09Galactinol synthase 2 OS=Solanum lycopersicum GN=G... [more]
GOLSA_ARATH6.639e-1225.44Galactinol synthase 10 OS=Arabidopsis thaliana GN=... [more]
GLG2_YEAS75.947e-925.55Glycogenin-2 OS=Saccharomyces cerevisiae (strain Y... [more]
YR707_MIMIV6.707e-925.96Uncharacterized protein R707 OS=Acanthamoeba polyp... [more]
GLG2_YEAST9.486e-926.84Glycogenin-2 OS=Saccharomyces cerevisiae (strain A... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A078HT57_BRANA0.000e+051.97BnaA09g15580D protein OS=Brassica napus GN=BnaA09g... [more]
A0A078E3Y1_BRANA0.000e+051.97Hexosyltransferase OS=Brassica napus GN=BnaC09g161... [more]
R0I860_9BRAS0.000e+051.38Hexosyltransferase OS=Capsella rubella GN=CARUB_v1... [more]
D7U201_VITVI0.000e+054.08Hexosyltransferase OS=Vitis vinifera GN=VIT_14s012... [more]
W8PV93_ARATH0.000e+053.17Hexosyltransferase (Fragment) OS=Arabidopsis thali... [more]
A5CAD0_VITVI0.000e+053.88Hexosyltransferase OS=Vitis vinifera GN=VITISV_042... [more]
M4EGP0_BRARP0.000e+051.77Hexosyltransferase OS=Brassica rapa subsp. pekinen... [more]
A0A0D3E5V7_BRAOL0.000e+051.97Hexosyltransferase OS=Brassica oleracea var. olera... [more]
B9I7T4_POPTR0.000e+055.69Hexosyltransferase (Fragment) OS=Populus trichocar... [more]
V7BM51_PHAVU0.000e+053.07Hexosyltransferase OS=Phaseolus vulgaris GN=PHAVU_... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002495Glycosyl transferase, family 8PFAMPF01501Glyco_transf_8coord: 272..470
e-value: 4.3E-11
score: 42.7
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 265..510
e-value: 9.9E-64
score: 214.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 269..509
NoneNo IPR availablePANTHERPTHR11183GLYCOGENINcoord: 150..550
NoneNo IPR availablePANTHERPTHR11183:SF51UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 4-RELATEDcoord: 150..550
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..553
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 12..31

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092162 ID=g.barbadense_cottongen_reftransV1_0092162; Name=g.barbadense_cottongen_reftransV1_0092162; organism=Gossypium barbadense; type=contig; length=1901bp
GAGGTTTGTGGCATAAGTTGAATCCTTGTTCCACACTTTCAAAATCTTAC
ATAAAATCTATAAAAAAAAAAACACCAAATACATACTATTTTGCATTAGA
AAGAAAAAATAAAGACATAAATTCTTCTGATTTTCCCTTCAAGAATTTGG
CACTTACCCTTTCTCAAGCACCAAGATTGTACTGTCGAGGATCTGTTACA
CCAATCTTCCAATGTTCATCAGGTTGTTTAAGGCTCCTAGCTATCCATCT
CCACTTCTTTAATCTCCAATTCATGTGCTCTGTTAGGCCACAATATGGTT
GCAGTGTCTCAGGCATTTCATCATACACTTGCCACCATTTCTCATGAGCT
TTATCACTTGCAAACCTCTGCATTCCTTCCTTATCCCAATTACAATCATA
ATCCCTGTAACACATCCATGGCTTCAACCCCAGAAAATGTAGGACCGAAA
TCTCATCCAGGATCTTTTCCTGACGCCGGCCTTCTTCCCCTTCGAAATCC
TTGAGGAAATTCACCTGAAAAGGCAACCTATGCCACCATATAAAGACTTC
ATTCAACCACCCTTGATAACTGCCATTGTATGAATCCATTTCCAAAACTT
TAACCATCAAATCTTCAAACATACACAATGATGGCTCTATCACCATCACC
CCATAATTAAACAAGGTTTTATCATTTGGAGCAGCTGATAGTTGAGGAAA
AACGAATAGCCAATCAATGTTGTTGAAAACTAGAACATCTGCATCAATGA
AAACAACTTTATCATACCAAGTTAGCATCCATATTCTAAGAGGACTAAAA
TTCCATTCATTGAATGAATCTTTGTCAGCAAAGGGGCTTCGGATTCCATT
GATTAACCGGGTGTCCCAACCAGCAGCTTTTAAACCCACTAAGGATTCGG
GGGTGATATTTTCATCATGAAGAAGAATTAAATCTCGGGTCGAATTGGTT
CGGATTATGCTTTGAGCCAAAGCAACGGCACCACAAACATAATCTTCGGA
TGTGTGAAGAACTGTTGCATAGGCTTCCTTTTGCTGGAACGCACTGTATT
TTAGCATTTTTAGCCTTTCATGATCTGCTGAATGGTATCTCCATGCTTCT
TTACCAGTTTCACCGTATGGCTGTGCAAGTTGGCAGGAGCCTGGAGGCAT
AAGCATGGTTTGTTTAAGCCTCCTTAGCTCAGGCTTATACACCCTATGAT
CCTCCACTTTCCTCAACAGATCTTCGCATCTGAATATCTCCTGCATCGGC
CCACAGCTCCCCACAAAGACTGCGTACACCGCCCGTTTTACCTCCGGCGT
CACCCACCCACTCTCTACCAATATATTCGCCACCACCAAATTCACTTGAA
GCATAAACACATCCCTCATCCCGCTTTTCCCGCTCCACCCTTTGCAAGGC
AGCTTCGCCACCACCACGTCCAGATCCTGGTACTTCTCCAGGGCTGGCAT
CGGAATCTCCGGACAATTCTGCTGGTTTTCATCGATCCGGAAGGGGAAAA
AATCCTCCCATTTTCTCTTCTTGGAAACACGATCGAAGCGAACGTGGACG
GTGCTAACAACTGAACCGGGTAGCTGATATTGGATTTCTTCATTGGAATT
GATATTAACTAAACCGATTTTAATCTCCTTCTTACTATTAATCTCTTCTT
GAAGAAGATCGAGGTTTCTGAAGCGTTGGTTGGAGGGAGGCGGATTGTGT
TTAAAAGCATCGATGATGTTGTAATTTGATCTGGAAAATAAAACGAAAAT
GATCAAGGATAAAGAGAGAAGTGTTATTGAGAGAGTGAAGGATTTTTGGT
TGCAATGGAAGGATTTGGAAGCCATTTTTGGAGTATTGATTCAATTTCTT
AGAACGTTGAATGGGAAGAACCGAAGAAGAGAGTTTGAAGGGAAATATAA
C
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR002495Glyco_trans_8
IPR029044Nucleotide-diphossugar_trans
Vocabulary: Molecular Function
TermDefinition
GO:0016757glycosyltransferase activity