g.barbadense_cottongen_reftransV1_0092162, g.barbadense_cottongen_reftransV1_0092162 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLYG_HUMAN (Glycogenin-1 OS=Homo sapiens GN=GYG1 PE=1 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 4.710e-15 Identity = 74/260 (28.46%), Postives = 116/260 (44.62%), Query Frame = -2 Query: 323 EAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNE-----WNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDK--TLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW------HRLPFQVNFLKDFEGEEGRRQEKILDEIS-VLHFLG-LKPWMCYRDYDCNWDKEGMQRFASDKAHEK----------WWQVY 1027 +A+ T L T++ Y GA+ L S+ + +TR L++L ++ L+ + +++ + S + + + + L W LT Y K VF+DAD LV NID LF +LSAAP+ FN GV V +PS+ + L+ E S++G QG LN F W LPF N L K+ + V+HFLG +KPW N+ + + +AH+ WW ++ Sbjct: 4 QAFVT-LTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYN-LSSISIYSYLPAFKVFGASAKVVHFLGRVKPW--------NYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIF 253
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLYG_RAT (Glycogenin-1 OS=Rattus norvegicus GN=Gyg1 PE=2 SV=4) HSP 1 Score: 80.1073 bits (196), Expect = 5.275e-15 Identity = 69/226 (30.53%), Postives = 106/226 (46.90%), Query Frame = -2 Query: 416 EAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNE-----WNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDK--TLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW------HRLPFQVN--------FLKDFEGEEGRRQEKILDEISVLHFLG-LKPW 1027 +A+ T L T++ Y GA+ L S+ + +TR ++L ++ L+ + +++ + S + + + + L W LT Y K VF+DAD LV +NID LF +LSAAP+ FN GV V +PS+ + L+ E S++G QG LN F W LPF N +L F+ G+ + V+HFLG KPW Sbjct: 4 QAFVT-LTTNDAYAKGALVLGSSLKQHRTTRRTVVLASPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGITLTKLHCWSLTQYSKCVFMDADTLVLSNIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSIETYNQLLHLASEQGSFDGGDQGLLNTYFSGWATTDITKHLPFVYNLSSLSIYSYLPAFKA-FGKNAK-------VVHFLGRTKPW 220
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS4_ARATH (Galactinol synthase 4 OS=Arabidopsis thaliana GN=GOLS4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 6.777e-15 Identity = 71/281 (25.27%), Postives = 118/281 (41.99%), Query Frame = -2 Query: 317 KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLF-------------------------------------VFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHR-LPFQVNFLKDFEGEEGRRQEKILDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1030 + AY T L + DYV G V LA+ + + S L++ ++ E L++ G R I + P + ++ N+S LRIW Y K++++DAD+ VF+NID LF +P+ +P FN G+ V EPS +E L+ + + Q +LN F ++ +P N + E L+++ V+H+ G KPW Y + N D+E ++ +KWW VY++ Sbjct: 22 RRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHREILRSQGCVVREIEPVYPPDNQVEFAMAYYVLNYSKLRIWNFEEYSKMIYLDADIQVFDNIDHLFDLSDAYFYAVMDCFCEKTWSHSLQYSIGYCQQCPEKVTWPEDMESPPPPLYFNAGMFVFEPSPLTYESLLQTLEITPPSPFAEQDFLNMFFEKVYKPIPLVYNLVLAMLWRHPENVE--LEKVKVVHYCAAGSKPWR-YTGEEANMDREDIKMLV-----DKWWDVYND 294
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS1_AJURE (Galactinol synthase 1 OS=Ajuga reptans GN=GOLS1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.152e-14 Identity = 78/288 (27.08%), Postives = 120/288 (41.67%), Query Frame = -2 Query: 317 KYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEW----NFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFP--------------------QLSAA-----PNDKT-----------LFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVF-IWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1051 K SA K+ Y T L + DYV G V LA+ + + S L++ ++ E L++ G + I I P A++ F N+S LRIW Y K+V++DAD+ V+ NID L P Q S PN T FN G+ V EPS ++ L+ + + Q +LN F + +P N + E L+++ V+H+ G KPW Y + N D+E ++ +KWW VY++ Sbjct: 15 KISALGAKKGYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAILPDVPEEHRELLRSQGCIVKEIEPIYPP-ANQIQFAMAYYVINYSKLRIWNFEEYSKMVYLDADIQVYENIDHLLDTPDGYFYAVMDCFCEKTWSHSRQFSIGYCQQCPNKVTWPAQMGSPPPLYFNAGMFVFEPSKTTYQTLLHTLRITPPTPFAEQDFLNMFFEPIYKPIPLVYNLVLAMLWRHPENVE--LEKVQVVHYCAAGSKPWR-YTGQEANMDREDIKMLV-----KKWWDVYND 293
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS3_ARATH (Galactinol synthase 3 OS=Arabidopsis thaliana GN=GOLS3 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.627e-14 Identity = 79/325 (24.31%), Postives = 131/325 (40.31%), Query Frame = -2 Query: 218 KYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLF-------------------------------------VFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFI-WWHRLPFQVNFLKDFEGEEGRRQEKI-LDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMP---ETLQPYCGLTEHMNWRLKKWRWIARSLKQPD 1051 K S ++K AY T L + DYV G V LA+ + +T S L++ ++ + L G + I + P ++ N+S LRIW Y K++++D D+ VF NID LF +P+ P FN G+ V EPSL + +L+ + + + Q +LN F + +P N + R E I L+E V+H+ G KPW + + N ++E ++ EKWW +Y++ + +CG E ++ + K L + D Sbjct: 8 KLSYGEKKRAYVTFLAGTGDYVKGVVGLAKGLRKTKSKYPLVVAVLPDVPADHRRQLLDQGCVIKEIQPVYPPDNQTQFAMAYYVLNYSKLRIWKFVEYSKLIYLDGDIQVFENIDHLFDLPDGNFYAVKDCFCEKTWSHTPQYKIGYCQQCPDKVTWPESELGPKPPLYFNAGMFVYEPSLPTYYNLLETLKVVPPTPFAEQDFLNMYFKDIYKPIPPVYNLVL---AMLWRHPENIELNEAKVVHYCAAGAKPWR-FTGQEGNMEREDIKMLV-----EKWWDIYNDESLDYKNFNVHCGQKEDVHRKPKTLPQFFTDLSEAD 323
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GLYG_RABIT (Glycogenin-1 OS=Oryctolagus cuniculus GN=GYG1 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 6.842e-14 Identity = 68/226 (30.09%), Postives = 102/226 (45.13%), Query Frame = -2 Query: 416 EAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNE-----WNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDK--TLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWW------HRLPFQVN--------FLKDFEGEEGRRQEKILDEISVLHFLG-LKPW 1027 +A+ T L T++ Y GA+ L S+ + ++R L +L ++ L+ + ++ + S + + + + L W LT Y K VF+DAD LV NID LF +LSAAP+ FN GV V +PS+ + L+ E S++G QG LN F W LPF N +L F+ + V+HFLG KPW Sbjct: 4 QAFVT-LTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAK--------VVHFLGQTKPW 220
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS1_SOLLC (Galactinol synthase 1 OS=Solanum lycopersicum GN=GOLS1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.865e-14 Identity = 71/269 (26.39%), Postives = 116/269 (43.12%), Query Frame = -2 Query: 317 AYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD----SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFP------------QLSAAPNDKTL-------------FNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFI-WWHRLPFQVNFLKDFEGEEGRRQEKI-LDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1024 AY T L + DYV G V LA+ +I+ S L++ ++ E + L G + I + D S+ N+S LRIW Y K+V++D D+ VF NID LF P + P D+ L FN G+ V +P+ ++ L+ + + Q +LN F + +P+ N L R EKI +++ +H+ G KPW Y + + D+E ++ +KWW +Y++ Sbjct: 21 AYVTFLAGNGDYVKGVVGLAKGLIKAKSMYPLVVAILPDVPEEHRMILTRHGCIVKEIEPLAPSLQSLDKYARSYYVLNYSKLRIWEFVEYSKMVYLDGDMQVFENIDHLFELPDKYLYAVADCICDMYGEPCDEVLPWPKELGPRPSVYFNAGMFVFQPNPSVYVRLLNTLKVTPPTQFAEQDFLNMYFKDVYKPIPYTYNMLL---AMLWRHPEKIEVNKAKAVHYCSPGAKPWK-YTGKEEHMDREDIKMLV-----KKWWDIYND 280
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS2_ARATH (Galactinol synthase 2 OS=Arabidopsis thaliana GN=GOLS2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 7.819e-14 Identity = 70/283 (24.73%), Postives = 119/283 (42.05%), Query Frame = -2 Query: 317 QKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLF-------------------------------------VFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFI-WWHRLPFQVNFLKDFEGEEGRRQEKI-LDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1033 +K AY T L + DYV G V LA+ + + S L++ ++ + L G + I + P + ++ N+S LRIW Y+K++++D D+ VF+NID LF +P+ P FN G+ V EP+L + +L+ V + + Q +LN F + +P N + R E I LD++ V+H+ G KPW + + N D+E ++ +KWW +Y++ Sbjct: 20 EKRAYVTFLAGTGDYVKGVVGLAKGLRKAKSKYPLVVAVLPDVPEDHRKQLVDQGCVVKEIEPVYPPENQTEFAMAYYVINYSKLRIWEFVEYNKMIYLDGDIQVFDNIDHLFDLPNGQFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVTWPEAKLGPKPPLYFNAGMFVYEPNLSTYHNLLETVKIVPPTLFAEQDFLNMYFKDIYKPIPPVYNLVL---AMLWRHPENIELDQVKVVHYCAAGAKPWR-FTGEEENMDREDIKMLV-----KKWWDIYND 293
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS7_ARATH (Galactinol synthase 7 OS=Arabidopsis thaliana GN=GOLS7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.227e-12 Identity = 76/297 (25.59%), Postives = 125/297 (42.09%), Query Frame = -2 Query: 317 RLKMLKYSAFQQKE-AYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEW----NFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLF-------------------------------------VFP-QLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVF--IWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1066 + M+ S KE AY T L + DYV G V LA+ + + S L++ ++ E L++ G R I + P +D++ N+S LRIW Y+K++++DAD+ VF NID LF V+P ++ +AP FN G+ V EP+ +E L+ + + Q +LN F ++ P L G+ L+ + V+H+ G KPW Y + N D+E ++ +KWW +Y++ Sbjct: 6 HVDMINASEKAPKERAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHREILRSQGCIVREIEPVHPP-DSQDAYARAYYIINYSKLRIWNFEEYNKMIYLDADIQVFGNIDDLFDMQDGYLHGVLSCFCEKIWSYTPLYSIGYCQYCPEKVVWPAEMESAP-PSPYFNAGMFVFEPNPLTYESLLQTLQVTPPTPFAEQDFLNMFFGKVFKPVSPVYNLILSVLWRHPGKVD---LESVKVVHYCPPGSKPWR-YTGEEPNMDREDVKMLI-----KKWWDIYND 291
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Match: GOLS1_ARATH (Galactinol synthase 1 OS=Arabidopsis thaliana GN=GOLS1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.098e-12 Identity = 70/279 (25.09%), Postives = 112/279 (40.14%), Query Frame = -2 Query: 317 AYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKD---SFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQL--------------SAAPNDKT-----------------------LFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHR-LPFQVNFLKDFEGEEGRRQEKILDEISVLHFL--GLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDE 1024 AY T L + DYV G V LA+ + + S L++ ++ E L G R I + P ++ N+S LRIW Y K++++D D+ V+ NID LF P S P K FN G+ + EP+L +EDL+ + + Q +LN F ++ +P N + E L ++ V+H+ G KPW Y + N ++E ++ +KWW +YD+ Sbjct: 31 AYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAMLPDVPEEHRRILVDQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWKFVEYSKMIYLDGDIQVYENIDHLFDLPDGYLYAVMDCFCEKTWSHTPQYKIRYCQQCPDKVQWPKAELGEPPALYFNAGMFLYEPNLETYEDLLRTLKITPPTPFAEQDFLNMYFKKIYKPIPLVYNLVLAMLWRHPENVE--LGKVKVVHYCAAGSKPWR-YTGKEANMEREDIKMLV-----KKWWDIYDD 301
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A087H0F0_ARAAL (Hexosyltransferase OS=Arabis alpina GN=AALP_AA4G012800 PE=3 SV=1) HSP 1 Score: 531.946 bits (1369), Expect = 4.985e-179 Identity = 252/488 (51.64%), Postives = 346/488 (70.90%), Query Frame = -2 Query: 173 KKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1633 +K I++G +NI+ E ++ G ++ VHV D + W+ FP IDE CPEIP+P D+DV+VA++PC GWS G+RDVF LQVNL VAN+ V+SG V VY VF+GSCGPM EIFRC++ +R+V D+ VY+ L RLKQ +LMP GSC++A P+ + G+EAWR + ++ + + S + + AY TVLH+SE YVCGA+ALAQSI ++ ST+D+ILLHD++IT SL+GL +AGW+ RLI+ IRSPF++K+S+NEWN+S LR+W +T YDK+VFID+D ++ +D LF +PQLSA+ ND+ LFN GVMV+EPS C+F+DL+ K L++ SYNG QG+LNE+F+WWHRL VN +K F+ E+ +R + + + +H+LGLKPW+CYRDYDCNWD FASD HEKWW VYD+M E L+ YCGL + M R++KWR IA++ P HW+I V DPR+ NL Sbjct: 70 EKRIRVGFLNIDEQERESFEARGPLILGNVHVSLDPLPVNVTWKSLFPEWIDEELSKCPEIPLPD----ADVDVIVARVPCDGWSENKGLRDVFRLQVNLAVANLAVQSG--LRRVDPTVYIVFIGSCGPMHEIFRCDERVRRVGDYWVYRSNLPRLKQKLLMPVGSCRVASPFAQLGQEAWRPKNEENHTSQAVTASPRRLRVAYVTVLHSSEAYVCGAIALAQSIRQSGSTKDMILLHDQSITNRSLLGLSSAGWNLRLIDRIRSPFSEKNSYNEWNYSKLRVWQVTDYDKLVFIDSDFIILRKLDHLFYYPQLSASGNDRVLFNSGVMVLEPSPCLFKDLIEKSLKIGSYNGGDQGFLNEIFVWWHRLSKSVNTMKYFD-EKSKRAHDLSENLEGVHYLGLKPWICYRDYDCNWDMSEKHVFASDTVHEKWWTVYDKMSEQLKGYCGLNKQMEKRIEKWRRIAKNNSLPGRHWEIEVKDPRKKNL 550
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: V4JWD7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10024070mg PE=4 SV=1) HSP 1 Score: 531.561 bits (1368), Expect = 7.969e-179 Identity = 258/508 (50.79%), Postives = 353/508 (69.49%), Query Frame = -2 Query: 173 PPSNQRFRNLDLLQEEINSKKEIKIGLVNINSNEEIQYQLPGSVV-STVHVRFDRVSKKRKWEDFFPFRIDENQQNCPEIPMPALEKYQ-DLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQYNL 1690 P N+ R L L++ + K+ I++G +N++ E Y+ G ++ VHV D + W+ FP IDE CPEIP+P E D+DV+VA++PC GWS G+RDVF LQVNL VAN+ V SG V VY VF+G CGPM EIF+C++ +R+V D+ VYKP L RLKQ +LMP GSC +A P+ + G+E WR + D+ + + +Q+ AY TVLH+SE YVCGA+ALAQSI ++ S +D++LLHD++IT SL+GL +AGW+ RLI+ IRSPFA KDS+NEWN+S LR+W +T YDK+VFIDAD ++ +D LF +PQLSA+ NDK LFN G+MV EPS C+F++LM K +++SYNG QG+LNE+F+WWHRL +VN +K F GE+ + + + + +H+LGLKPW+CYRDYDCNWD + FASD HEKWW+VYD+M + L+ YCGL + M R++KWR IA + PD+HW+I V DPR+ NL Sbjct: 55 PQVNRNPRWLRLVRNYLPEKR-IRVGYLNLDEQERESYEASGPLILKNVHVSLDPIPANVTWKSLFPEWIDEEVSYCPEIPLPTPEGSDADVDVIVARVPCDGWSENKGLRDVFRLQVNLAVANLAVRSG--LRRVDSTVYIVFIGLCGPMHEIFKCDERVRRVGDYWVYKPNLPRLKQKLLMPAGSCHVASPFAQVGQEVWRQKNEDN----LTSEAISKQRVAYVTVLHSSEAYVCGAIALAQSIRQSGSNKDMVLLHDQSITNRSLLGLSSAGWNLRLIDRIRSPFAKKDSYNEWNYSKLRVWQVTDYDKLVFIDADFIILKKMDHLFYYPQLSASGNDKVLFNSGIMVFEPSPCLFKELMEKSFKINSYNGGDQGFLNEIFVWWHRLSKRVNTMKYF-GEKLKGTHDLPENLEGVHYLGLKPWVCYRDYDCNWDISVRRVFASDSVHEKWWKVYDKMSDQLKGYCGLNKEMEKRIEKWRRIAENNSLPDKHWEIKVKDPRKKNL 554
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: M1BMZ9_SOLTU (Hexosyltransferase OS=Solanum tuberosum GN=PGSC0003DMG400018997 PE=3 SV=1) HSP 1 Score: 528.865 bits (1361), Expect = 1.389e-178 Identity = 273/500 (54.60%), Postives = 345/500 (69.00%), Query Frame = -2 Query: 182 LDLLQEEINSKKEIKIGLVNINSNEEIQY-QLPGSV-VSTVHVRFDRVSKKRKWEDFFPFRIDENQ----QNCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLLRKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQKEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQPDEHWKIGVTDPRQ 1663 LLQ+EI K +KIGLVN++ Y L G+ + T V+F +VS K KW+D FP IDE + CPEIPMP E Y++LDVVVAK+PCK G G RDV LQVNLVVAN+LV GW R VYAVF+G CGPM EIFRCED+L E+ VYKPEL++LKQ +LMP GSCQLA+P+ E +E+W+ + A + K + +EAY TV+H+SE YVCGA+ALAQSII TNSTRDL+LL D++I+P+SL GL+AAGW + I IRSP A K+++NEWN+S LRIW L YDKV+FID+D +VF NID F +P+LSAA ND +FN GVM+IEPS C F++LM K E+ SYNG QG+LNE+F+WWHR P ++N LK F R + D+ +H+LGLKPW+CY DYDCNWDK Q FASD AHE+WW+VY +M L+ YC LT M+ R+ KWR A+ D HW+I V DPR+ Sbjct: 13 FQLLQDEIKDKSTLKIGLVNLDDVSFFDYVGLHGAKNMETFDVKFPKVSNKIKWKDLFPEWIDEKELSAKPTCPEIPMPVFEVYEELDVVVAKVPCKH-VGVDGSRDVLRLQVNLVVANLLVSGGW---NKNRPVYAVFIGDCGPMWEIFRCEDMLLHEENLWVYKPELKKLKQKILMPVGSCQLARPFSEQEQESWKSYPAS----TLDKTFHKKPREAYVTVIHSSEAYVCGAIALAQSIILTNSTRDLVLLADDSISPKSLYGLRAAGWKIKKIKRIRSPHAPKNAYNEWNYSKLRIWQLIEYDKVIFIDSDFVVFRNIDQFFSYPELSAAGNDGYIFNSGVMIIEPSKCKFQNLMNKRFEVSSYNGGDQGFLNEMFVWWHRWPTKLNTLKIFINSNHR---DLPDDSYTVHYLGLKPWLCYEDYDCNWDKVESQIFASDSAHERWWKVYKKMSMELREYCALTPQMDARIIKWRRKAKKANFSDGHWRIQVKDPRR 501
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A6YTD3_CUCME (Hexosyltransferase OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 532.717 bits (1371), Expect = 1.484e-178 Identity = 267/508 (52.56%), Postives = 347/508 (68.31%), Query Frame = -2 Query: 173 KKEIKIGLVNINSNEEIQ----YQLPG------SVVSTVHVRFDRVSKKRKWEDFFPFRIDENQQ-----NCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLL----RKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQ-KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQ-PDEHWKIGVTDPRQYNL 1633 ++ IKIGL+NI+++++ + L G S + TV V FDR+ K+ +WE FP IDE+++ CP IPMP E Y DL++VV ++PCK G RDVF LQ NL A + V SGWV E+ R VY VF+G CG M+EIFRC+DL+ R VE+ VYKPE++RLKQ +L+P GSCQLA Y TG+E WR+ + + + K+AY T+LH+SE YVCGA+ALAQS+++TN+++DLILL D +I+P S+ LK AGW I+ IRSPF++K S+NEWN+S LRIW LT YDK+VFIDAD+LV NID F PQLSAA N+K FN GVM++EPS C+FE+LM K E+ SYNG QG+LNEVF WWHRLP +VN+LK F E + +H+LGLKPWMCY+DYDCNWD E Q FASD AH KWWQ+Y+ MP LQ +CGLT+ M+ R++KWR IAR+ D HWKI +TDPR++ L Sbjct: 105 QETIKIGLINISTDDKDEIHDTLHLLGLIENRRSRIETVTVDFDRIEKEFEWERLFPEWIDEDEKYKSSPKCPNIPMPKTEDYSDLNIVVLRIPCK--RGILTSRDVFRLQANLAAARVAVASGWVEEEIYRTVYVVFLGECGAMREIFRCDDLVIKDDRTVENVWVYKPEIKRLKQKILLPFGSCQLAPVYARTGREVWRHFMLQKPPKTNSTTTHYHKPKQAYVTILHSSEAYVCGAIALAQSLLQTNTSKDLILLADNSISPNSIQALKDAGWYVMRIDRIRSPFSEKGSYNEWNYSKLRIWQLTMYDKIVFIDADLLVLKNIDQFFALPQLSAAANNKMRFNSGVMIVEPSACLFEELMEKSFELKSYNGGDQGFLNEVFTWWHRLPSRVNYLKIFLKENSENDSGT--DPYAIHYLGLKPWMCYKDYDCNWDMEDHQIFASDSAHAKWWQIYESMPTELQHFCGLTKKMDSRIRKWRRIARNNSTFADAHWKIKITDPRRHRL 608
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Match: A0A0A0LGC4_CUCSA (Hexosyltransferase OS=Cucumis sativus GN=Csa_2G021740 PE=3 SV=1) HSP 1 Score: 529.25 bits (1362), Expect = 3.237e-177 Identity = 263/505 (52.08%), Postives = 345/505 (68.32%), Query Frame = -2 Query: 182 KKEIKIGLVNINSNEEIQ----YQLPGSV------VSTVHVRFDRVSKKRKWEDFFPFRIDENQQ-----NCPEIPMPALEKYQDLDVVVAKLPCKGWSGKSGMRDVFMLQVNLVVANILVESGWVTPEVKRAVYAVFVGSCGPMQEIFRCEDLL----RKVEDHRVYKPELRRLKQTMLMPPGSCQLAQPYGETGKEAWRYHSADHERLKMLKYSAFQQ-KEAYATVLHTSEDYVCGAVALAQSIIRTNSTRDLILLHDENITPESLVGLKAAGWDTRLINGIRSPFADKDSFNEWNFSPLRIWMLTWYDKVVFIDADVLVFNNIDWLFVFPQLSAAPNDKTLFNYGVMVIEPSLCMFEDLMVKVLEMDSYNGSYQGWLNEVFIWWHRLPFQVNFLKDFEGEEGRRQEKILDEISVLHFLGLKPWMCYRDYDCNWDKEGMQRFASDKAHEKWWQVYDEMPETLQPYCGLTEHMNWRLKKWRWIARSLKQ-PDEHWKIGVTDPRQ 1633 ++ IKIGL+NI ++++ + L G + + TV + FDR+ K+ +WE FP IDE+++ CP IPMP E Y DL+VVV ++PCK G RDVF LQ NL A + V SGWV ++ R VY VF+G CG M+EIFRC+DL+ R VE+ VYKPE++RLKQ +L+P GSCQLA Y TG+E WR+ + + + K+AY T+LH+SE YVCGA+ALAQS+++TN+++DL+LL D +I+P S+ LK AGWD I+ IRSPF++K S+NEWN+S LRIW LT Y+K+VFIDAD+LV NID F PQLSAA N+K FN GVM++EPS C+FE+LM K E+ SYNG QG+LNE+F WWHRLP +VN+LK F E + +H+LGLKPWMCY+DYDCNWD E Q FASD AH KWWQVY+ MP LQ +CGLT+ M+ R++KWR IAR+ D HWKI +TDPR+ Sbjct: 95 QETIKIGLINIRTDDKDEIHDTLHLLGLIESRRTRIETVTIDFDRIEKEFEWERLFPEWIDEDEKYRSSPKCPNIPMPKTEDYSDLNVVVLRIPCK--RGILMSRDVFRLQANLAAARVAVASGWVEEDIYRTVYVVFLGECGAMREIFRCDDLVIKDDRTVENVWVYKPEIKRLKQKILLPFGSCQLAPVYARTGREVWRHFMLRKPPKTNSTTTHYHRPKQAYVTILHSSEAYVCGAIALAQSLLQTNTSKDLLLLADNSISPNSIQALKDAGWDAMRIDRIRSPFSEKGSYNEWNYSKLRIWQLTMYEKIVFIDADLLVLKNIDQFFALPQLSAAANNKMRFNSGVMIVEPSACLFEELMEKSFELKSYNGGDQGFLNEIFTWWHRLPSRVNYLKIFLKENSENDSGT--DPYAIHYLGLKPWMCYKDYDCNWDMEDHQIFASDSAHAKWWQVYESMPTELQHFCGLTKKMDSRIRKWRSIARNNSTFTDAHWKINITDPRR 595 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092162 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092162 ID=g.barbadense_cottongen_reftransV1_0092162; Name=g.barbadense_cottongen_reftransV1_0092162; organism=Gossypium barbadense; type=contig; length=1901bpback to top |