g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_YEAST (Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.571e-12 Identity = 57/212 (26.89%), Postives = 95/212 (44.81%), Query Frame = -2 Query: 486 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAV--EGETGKVYRANF-------HDRDGRTVLILRPGKQNTTSLDNQL--RHLVYMIENAILNLPED-QEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGK 1079 DA + +++ AR WN DK+ ML L WR + I E AV ETG + +D D R V+++RP +++ Q + + +IE + L E+ L D G+S+S P+K I + HYPE L +++ P IF W I+K +LD K+ F ++++ + + + +P GG+ Sbjct: 109 DATILKFIRARKWNADKTIAMLGHDLYWRKDTINKIINGGERAVYENNETGVIKNLELQKATIQGYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQSKLFFKENYPASTTILFDLNGFSMSNMDYAPVKFL---ITCFEAHYPESLGHLLIHKAPWIFNPIWNIIKNWLDPVVASKIVFT-----KNIDELHKFIQPQYIPRYLGGE 312
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YN02_CAEEL (CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.358e-12 Identity = 61/248 (24.60%), Postives = 117/248 (47.18%), Query Frame = -2 Query: 468 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNT------TSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSAR-----------DTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYN 1148 ES++ E++ +L+ + K DA L R+L AR+++V K+K M+ ++ WR + ++I W V + + +H D+ GR + ILR G+ +T ++N ++ + + E+ + E ++ I + WSL + S R I +++ +YPE + ++ PR+F W ++ F+D KT +K + E +R + +E+ +P DF G + L N Sbjct: 256 ESRLCEIKYSLQ--AHHKGKLPNDAHLLRFLRARDFDVAKAKDMVHASIIWRKQHNVDKILEEWTRPTV---IKQYFPGCWHNSDKAGRPMYILRFGQLDTKGMLRSCGVENLVKLTLSICEDGLQRAAEATRKLGTPI--SSWSLVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISPFIDEKTRKKFMVSGGSGGDLKEELRKHIEEKFIP-DFLGGSCLTTN 495
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.176e-12 Identity = 62/218 (28.44%), Postives = 100/218 (45.87%), Query Frame = -2 Query: 489 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSV-PIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGG 1079 DA L R+L AR +++ K+ M KWR + I + E + K+Y +H D+DGR V GK + T+ + L++LV+ E LP + +L+ D +G S++++ I R+ + Q++YPER+ L N P F +K+ K FLD T K+ + K+ EL++ +NLP FGG Sbjct: 55 DASLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPI---VAKMYPTYYHKTDKDGRPVYFEELGKVDLVKMLKITTQERMLKNLVWEYEAMCQYRLPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKK--ELLKQ-IPPQNLPVKFGG 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SFH11_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.973e-11 Identity = 69/250 (27.60%), Postives = 111/250 (44.40%), Query Frame = -2 Query: 483 NQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSLDNQL---RHLVYMIEN---------AILNLPEDQE--QMVWLIDFTGWSLST-SVPIKSARDTINVL-QNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1175 N++ S +E V+ R L K+ LRR+L+ R+++++KSK+ +KWR YK + I + + GE K Y FH D+ GR + I R G + + R++ Y I+ ++ D+ ++D +G +S S P +S I + N+YPE L + N F W +K FLDA+T KV+ + P EL+ + + NLPT GG Sbjct: 16 NKEEQSPNNEEMVEAFRNLLLLHGHLPDKHGDHNTLRRFLKMRDFDLEKSKEAFLNYMKWRVDYKVDLISQKFKFEEYGEVKKHYPHGFHKVDKTGRPIYIERLGMTDLNAFLKATTIERYVNYHIKEQEKTMSLRYPACSIASDKHVSSTTTILDVSGVGMSNFSKPARSLFMEIQKIDSNYYPETLHRLFVVNASSGFRMLWLALKTFLDARTLAKVQVLGPNYLG--ELLEA-IEPSNLPTFLGGNC 262
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SFH6_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.227e-11 Identity = 63/218 (28.90%), Postives = 97/218 (44.50%), Query Frame = -2 Query: 489 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGK------QNTTSLDNQLRHLVYMIENA-ILNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKSARDTINVLQ----NHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGG 1070 + R+L+AR ++++K+K M + ++WR + + I ++ EI E K Y +H D++GR V I R GK T+LD +R+ V E + +L P + ++D G L KSAR+ I LQ ++YPE L + N F W VK FLD KT K+ + K + + D LP GG Sbjct: 109 MLRFLKARKFDIEKAKHMWADMIQWRKEFGTDTIIQDFQFEEI---DEVLKYYPHGYHSVDKEGRPVYIERLGKVDPNKLMQVTTLDRYIRYHVKEFERSFMLKFPACTIAAKKYIDSSTTILDVQGVGLKNFT--KSARELITRLQKIDGDNYPETLHQMFIINAGPGFRLLWSTVKSFLDPKTTSKIHVLGCKYQSK---LLEIIDSSELPEFLGG 318
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0D2U6Y6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G010500 PE=4 SV=1) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 293/295 (99.32%), Postives = 294/295 (99.66%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPE QEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGT+QSGPEITPEPICLAPAAS Sbjct: 1 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEGQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTDQSGPEITPEPICLAPAAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B0P6U1_GOSAR (Cral-trio domain-containing c23b6.04c OS=Gossypium arboreum GN=F383_10739 PE=4 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 285/295 (96.61%), Postives = 292/295 (98.98%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWSHSHH+Q+ DSLQHESKVKELRAA+RPLSDRGLKYCTDACL RYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIA+EGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLA AVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIK+ATLWGFDNKLQSTGT+QSGP+ITPEPICLAPAAS Sbjct: 1 MFSRWSHSHHSQETDSLQHESKVKELRAAVRPLSDRGLKYCTDACLMRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAIEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLATAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKTATLWGFDNKLQSTGTDQSGPQITPEPICLAPAAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0D2TN34_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G202600 PE=4 SV=1) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 255/295 (86.44%), Postives = 274/295 (92.88%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS SHHN++NDSLQ ESK+KELRAA+ PLS R LKYCTDACLRRYLEARNWN DKSKKMLEETLKWRSTYKPEEIRWH++AVEGETGKVYRA+FHDR GRTVLILRPGKQNTTSLDNQLRHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSARDTIN+LQNHYPERL +A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFDEENLPT+FGGKA+LEYNHEEFSKQM QDDIKSA LWGFD+KLQ G SG ++ PEP+CLAP+AS Sbjct: 1 MFSRWSSSHHNKENDSLQQESKIKELRAAIGPLSGRSLKYCTDACLRRYLEARNWNADKSKKMLEETLKWRSTYKPEEIRWHKVAVEGETGKVYRASFHDRHGRTVLILRPGKQNTTSLDNQLRHLVYLIENAILNLPETQEQMAWLIDFTGWTLSTSVPIKSARDTINLLQNHYPERLVIAFLYNPPRIFEAFWKIVKYFMDAKTFQKVKFVYPKNTESVELMRSYFDEENLPTEFGGKAVLEYNHEEFSKQMNQDDIKSANLWGFDDKLQCIGNGHSGSDVAPEPVCLAPSAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B0P2Z4_GOSAR (Random slug 5 OS=Gossypium arboreum GN=F383_23926 PE=4 SV=1) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 254/295 (86.10%), Postives = 275/295 (93.22%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS+SHHN++NDSLQ ESK+KEL+AA+ PLS R LKYCTDACLRRYLEARNWN DKSKKMLEET+KWRSTYKPEEIRWHE+AVEGETGKVYRA+FHDR GRTVLILRPGKQNTTSLDNQLRHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSA DTIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFDEENLPT+FGGKA+LEYNHEEFSKQM QDDIKSA LWGFD+KLQ G SG ++ PEP+CLAP+AS Sbjct: 1 MFSRWSNSHHNKENDSLQQESKIKELQAAIGPLSGRSLKYCTDACLRRYLEARNWNADKSKKMLEETIKWRSTYKPEEIRWHEVAVEGETGKVYRASFHDRHGRTVLILRPGKQNTTSLDNQLRHLVYLIENAILNLPETQEQMAWLIDFTGWTLSTSVPIKSAHDTINLLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFMDAKTFQKVKFVYPKNTESVELMRSYFDEENLPTEFGGKAVLEYNHEEFSKQMSQDDIKSANLWGFDDKLQCIGNRHSGSDVAPEPVCLAPSAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A061FCY0_THECC (Sec14p-like phosphatidylinositol transfer family protein isoform 1 OS=Theobroma cacao GN=TCM_034028 PE=4 SV=1) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 254/295 (86.10%), Postives = 273/295 (92.54%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS+S+H Q+NDSLQHESKVKELRA+L PLS R L YCTDACLRRY+EARNWNVDKSKKMLEET+KWRS YKPEEIRWHE+AVEGETGKVYRANFHDR GRTVLILRPGKQNTTSLDNQ RHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSARDTINVLQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNK+SVELMRSYFDEENLPT+FGG+A+L+YNHEEFSKQM+QDDIKSA LWG D+KLQS G S E+ PEP+CLAP S Sbjct: 1 MFSRWSNSNHVQENDSLQHESKVKELRASLPPLSGRCLNYCTDACLRRYMEARNWNVDKSKKMLEETIKWRSIYKPEEIRWHEVAVEGETGKVYRANFHDRHGRTVLILRPGKQNTTSLDNQFRHLVYLIENAILNLPEGQEQMAWLIDFTGWTLSTSVPIKSARDTINVLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKDSVELMRSYFDEENLPTEFGGRAVLQYNHEEFSKQMIQDDIKSANLWGLDDKLQSVGNGHSLAEVAPEPVCLAPPVS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: M5XYV3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009403mg PE=4 SV=1) HSP 1 Score: 487.649 bits (1254), Expect = 1.824e-165 Identity = 225/295 (76.27%), Postives = 252/295 (85.42%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF WS SHH Q ND LQHE K+ EL+AA+ PLS R L++CTDAC RRYLEARNWNVDK+KKMLEETL WRSTYKPEEI W E+A EGETGKVYRA+F DR GRTVLILRPG QNT S+DNQ+RHLVY+IENA+ NLPE QEQM WLIDFTGW+LST+VP+KSARDTIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELM+ YFDE+NLPT+FGG AIL Y+HEEFSK M QDD++SA WG D+KL G SG E+ PEP+CLAP AS Sbjct: 1 MFRLWSSSHH-QDNDPLQHEVKINELKAAIGPLSGRSLQFCTDACFRRYLEARNWNVDKAKKMLEETLNWRSTYKPEEICWREVANEGETGKVYRASFRDRSGRTVLILRPGMQNTVSIDNQMRHLVYLIENAVFNLPEGQEQMAWLIDFTGWTLSTTVPVKSARDTINILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMKQYFDEKNLPTEFGGHAILNYDHEEFSKLMTQDDVRSAAFWGRDDKLPHYGNGHSGAEVAPEPVCLAPVAS 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A067KQT3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04422 PE=4 SV=1) HSP 1 Score: 486.878 bits (1252), Expect = 3.706e-165 Identity = 226/294 (76.87%), Postives = 257/294 (87.41%), Query Frame = -2 Query: 324 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1205 MF RWS+S+ +QQ+ SLQ +SKV ELR A+ PLS R L+YC+DACLRRYLEAR+WNVDKSKKML+ETLKWRST+KPEEIRWHE+A+EGETGKVYRANFHDR GRTVLILRPG QNT S+DNQLRHLVY+IENAILNLPE QEQM WLIDFTGWS++ SVPIK+AR+TIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKN +SVE+M+SYFD+ENLP DFGGKAIL+Y+HEEFS+ M DD K+A+ WGFDNKLQ G E+ PEP L A Sbjct: 1 MFHRWSNSNQDQQDVSLQRDSKVNELRNAIGPLSGRSLQYCSDACLRRYLEARSWNVDKSKKMLQETLKWRSTFKPEEIRWHEVAIEGETGKVYRANFHDRLGRTVLILRPGMQNTKSIDNQLRHLVYLIENAILNLPEGQEQMAWLIDFTGWSITNSVPIKTARETINILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNVDSVEVMQSYFDDENLPADFGGKAILKYDHEEFSRLMSLDDDKAASFWGFDNKLQPVTNGHHGAEVAPEPNGLVSPA 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: V4T4X8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002080mg PE=4 SV=1) HSP 1 Score: 484.567 bits (1246), Expect = 1.892e-164 Identity = 222/276 (80.43%), Postives = 250/276 (90.58%), Query Frame = -2 Query: 345 QQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEP 1172 Q+++ HESKVKEL+AA+ PL R L+YC+DACL+RYLEARNWNVDK+KKMLEETLKWRSTY+PEEIRW+EIAVEGETGK++RA FHDR GRTVLILRPG QNT S+DNQ+RHLVY+IENAILNLPE QEQM WLIDFTGWSLSTSVPI+SAR+TIN+LQNHYPERLA+A LYNPPRIFEAFWK+VKYFLDAKTFQKVKFVYPKNK+SVE+M SYFDEENLPT+FGGKA L Y+HEEFSK M+QDD KSATLWGFD+KLQ G SG E+ PEP Sbjct: 9 QESEEHHHESKVKELKAAIGPLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEEFSKLMIQDDSKSATLWGFDDKLQRVGNGHSGAEVAPEP 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: F6H1I3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12420 PE=4 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 2.100e-164 Identity = 224/295 (75.93%), Postives = 252/295 (85.42%), Query Frame = -2 Query: 324 TMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1208 TM W SHH+Q+ D + +SKV EL+AAL PLS R L+YC DACL+RYLEARNWNVDKSKKMLEETL WRSTYKPEEIRW ++A EGETGKV+RANFHDR GRTVLILRPGKQNTT+LDNQ+RHLVY++ENAILNLPEDQEQMVWLIDFTG + S SVPIK+ARDTIN+LQNHYPERL +A LY+PPRIFEAFWK VKY LDAKTFQKVKFVYPK+K SVELM SYFD ENLPTDFGGKA + Y+HEEFS+ M QDD+KSA LWGF +KLQ S E++PEP CLAPA+ Sbjct: 21 TMLRLWGKSHHDQEKDLQKSDSKVHELKAALGPLSGRSLQYCNDACLKRYLEARNWNVDKSKKMLEETLTWRSTYKPEEIRWSDVATEGETGKVFRANFHDRHGRTVLILRPGKQNTTALDNQVRHLVYLLENAILNLPEDQEQMVWLIDFTGMTFSNSVPIKTARDTINILQNHYPERLFLAFLYSPPRIFEAFWKAVKYLLDAKTFQKVKFVYPKDKNSVELMSSYFDVENLPTDFGGKATMNYDHEEFSRLMTQDDVKSANLWGFGDKLQHVSNGHSVAEVSPEPACLAPAS 315
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A059BNP3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01566 PE=4 SV=1) HSP 1 Score: 482.641 bits (1241), Expect = 2.260e-163 Identity = 221/298 (74.16%), Postives = 260/298 (87.25%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQST---GTNQSGPEITPEPICLAPAAS 1205 MF RWS+SHH++++DSLQ ESKV EL+ A+ PLS R LKYC DACLRRYLEARNWN+D +KKML +TLKWRS +KPEEI W E+A EGETGKVYRA+FHDR GR+VLILRPG QNT SLD+Q+RHLVY+IENAILNLPE QEQM WLIDFTGWSLS +VPIKSAR++IN+LQNHYPERLA+A LYNPPRIFEAFWK+VKYF++AKTFQKVKFVYPKNK+SVELMRS+FDEENLPT+FGG+A L+Y+HEEFS+ M QDDIK+A+LWGFD + + G SG E+ PEP+ +AP AS Sbjct: 1 MFRRWSNSHHSEEDDSLQFESKVNELKTAMGPLSGRSLKYCDDACLRRYLEARNWNIDNAKKMLADTLKWRSAFKPEEISWEEVANEGETGKVYRASFHDRYGRSVLILRPGMQNTQSLDDQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSNNVPIKSARESINILQNHYPERLAVAFLYNPPRIFEAFWKVVKYFMEAKTFQKVKFVYPKNKDSVELMRSFFDEENLPTEFGGRAKLKYDHEEFSRLMAQDDIKAASLWGFDRQPEKAFRDGNKHSGAEVAPEPVGVAPPAS 298 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |