g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_YEAST (Phosphatidylinositol transfer protein CSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSR1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.571e-12 Identity = 57/212 (26.89%), Postives = 95/212 (44.81%), Query Frame = -2 Query: 486 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAV--EGETGKVYRANF-------HDRDGRTVLILRPGKQNTTSLDNQL--RHLVYMIENAILNLPED-QEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGK 1079 DA + +++ AR WN DK+ ML L WR + I E AV ETG + +D D R V+++RP +++ Q + + +IE + L E+ L D G+S+S P+K I + HYPE L +++ P IF W I+K +LD K+ F ++++ + + + +P GG+ Sbjct: 109 DATILKFIRARKWNADKTIAMLGHDLYWRKDTINKIINGGERAVYENNETGVIKNLELQKATIQGYDNDMRPVILVRPRLHHSSDQTEQELEKFSLLVIEQSKLFFKENYPASTTILFDLNGFSMSNMDYAPVKFL---ITCFEAHYPESLGHLLIHKAPWIFNPIWNIIKNWLDPVVASKIVFT-----KNIDELHKFIQPQYIPRYLGGE 312
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YN02_CAEEL (CRAL-TRIO domain-containing protein T23G5.2 OS=Caenorhabditis elegans GN=T23G5.2 PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.358e-12 Identity = 61/248 (24.60%), Postives = 117/248 (47.18%), Query Frame = -2 Query: 468 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNT------TSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSAR-----------DTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYN 1148 ES++ E++ +L+ + K DA L R+L AR+++V K+K M+ ++ WR + ++I W V + + +H D+ GR + ILR G+ +T ++N ++ + + E+ + E ++ I + WSL + S R I +++ +YPE + ++ PR+F W ++ F+D KT +K + E +R + +E+ +P DF G + L N Sbjct: 256 ESRLCEIKYSLQ--AHHKGKLPNDAHLLRFLRARDFDVAKAKDMVHASIIWRKQHNVDKILEEWTRPTV---IKQYFPGCWHNSDKAGRPMYILRFGQLDTKGMLRSCGVENLVKLTLSICEDGLQRAAEATRKLGTPI--SSWSLVVDLDGLSMRHLWRPGVQCLLKIIEIVEANYPETMGQVLVVRAPRVFPVLWTLISPFIDEKTRKKFMVSGGSGGDLKEELRKHIEEKFIP-DFLGGSCLTTN 495
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC14 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.176e-12 Identity = 62/218 (28.44%), Postives = 100/218 (45.87%), Query Frame = -2 Query: 489 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSV-PIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGG 1079 DA L R+L AR +++ K+ M KWR + I + E + K+Y +H D+DGR V GK + T+ + L++LV+ E LP + +L+ D +G S++++ I R+ + Q++YPER+ L N P F +K+ K FLD T K+ + K+ EL++ +NLP FGG Sbjct: 55 DASLLRFLRARKFDIQKAIDMFVACEKWREDFGVNTILKDFHYEEKPI---VAKMYPTYYHKTDKDGRPVYFEELGKVDLVKMLKITTQERMLKNLVWEYEAMCQYRLPACSRKAGYLVETSCTVLDLSGISVTSAYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPFLDPVTVSKIHILGYSYKK--ELLKQ-IPPQNLPVKFGG 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SFH11_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana GN=SFH11 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.973e-11 Identity = 69/250 (27.60%), Postives = 111/250 (44.40%), Query Frame = -2 Query: 483 NQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSLDNQL---RHLVYMIEN---------AILNLPEDQE--QMVWLIDFTGWSLST-SVPIKSARDTINVL-QNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1175 N++ S +E V+ R L K+ LRR+L+ R+++++KSK+ +KWR YK + I + + GE K Y FH D+ GR + I R G + + R++ Y I+ ++ D+ ++D +G +S S P +S I + N+YPE L + N F W +K FLDA+T KV+ + P EL+ + + NLPT GG Sbjct: 16 NKEEQSPNNEEMVEAFRNLLLLHGHLPDKHGDHNTLRRFLKMRDFDLEKSKEAFLNYMKWRVDYKVDLISQKFKFEEYGEVKKHYPHGFHKVDKTGRPIYIERLGMTDLNAFLKATTIERYVNYHIKEQEKTMSLRYPACSIASDKHVSSTTTILDVSGVGMSNFSKPARSLFMEIQKIDSNYYPETLHRLFVVNASSGFRMLWLALKTFLDARTLAKVQVLGPNYLG--ELLEA-IEPSNLPTFLGGNC 262
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SFH6_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana GN=SFH6 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.227e-11 Identity = 63/218 (28.90%), Postives = 97/218 (44.50%), Query Frame = -2 Query: 489 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGK------QNTTSLDNQLRHLVYMIENA-ILNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKSARDTINVLQ----NHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGG 1070 + R+L+AR ++++K+K M + ++WR + + I ++ EI E K Y +H D++GR V I R GK T+LD +R+ V E + +L P + ++D G L KSAR+ I LQ ++YPE L + N F W VK FLD KT K+ + K + + D LP GG Sbjct: 109 MLRFLKARKFDIEKAKHMWADMIQWRKEFGTDTIIQDFQFEEI---DEVLKYYPHGYHSVDKEGRPVYIERLGKVDPNKLMQVTTLDRYIRYHVKEFERSFMLKFPACTIAAKKYIDSSTTILDVQGVGLKNFT--KSARELITRLQKIDGDNYPETLHQMFIINAGPGFRLLWSTVKSFLDPKTTSKIHVLGCKYQSK---LLEIIDSSELPEFLGG 318
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A068UGW9_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_26 OS=Coffea canephora GN=GSCOC_T00024802001 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 1.564e-162 Identity = 223/295 (75.59%), Postives = 259/295 (87.80%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF RW++SHH + DS + + KV EL+AAL PLS RGL+YC+DACL+RYLEAR+WNVDK+KKMLEETL+WRSTYKPEEIRWHE+AVEGETGKV+RANFHDR GRTVLILRPGKQNTTS+DNQ+RHLVY+IENAILNLPE QEQM WLIDFTGWS++ +VPIKSA+DT+NVLQNHYPERLA+A LY+PPRIFEAFWKIVK+FLD KTFQKVKFVYPKNK+SVELMRSYFD +NLPT+FGGKA L+Y+HEEFS+QM QDD+K+A +WGFD +G E+ PEP LA AS Sbjct: 1 MFRRWNNSHH--EKDSDEQQEKVTELKAALGPLSGRGLQYCSDACLKRYLEARSWNVDKAKKMLEETLRWRSTYKPEEIRWHEVAVEGETGKVFRANFHDRHGRTVLILRPGKQNTTSIDNQIRHLVYLIENAILNLPEGQEQMAWLIDFTGWSITNNVPIKSAKDTVNVLQNHYPERLAVAFLYSPPRIFEAFWKIVKFFLDPKTFQKVKFVYPKNKDSVELMRSYFDVDNLPTEFGGKATLQYDHEEFSRQMAQDDVKAAKVWGFDKHPNGF----TGAEVAPEPETLASPAS 289
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9R7T6_RICCO (Transporter, putative OS=Ricinus communis GN=RCOM_1594180 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 2.232e-162 Identity = 218/294 (74.15%), Postives = 256/294 (87.07%), Query Frame = -2 Query: 324 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1205 MF RWS+SH +Q+++SL+ +SK+ ELR + PLS R L+YCTDACLRRYLEAR+WNVDKSKKMLEETLKWRS YKPEEIRW+E+A+E ETGK+YRANF DR GRTVLILRPG QNT S++NQLRHLVY+IENAI+NLPE QE+M WLIDFTGWS+S SVPIK+AR+TIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFD+ NLPTDFGGKA+L+Y+H+EFS M QDD+K+A+ WG ++K Q+ G E+ PEPI L P A Sbjct: 1 MFHRWSNSHKDQEDESLKQKSKINELRNVIGPLSGRSLQYCTDACLRRYLEARSWNVDKSKKMLEETLKWRSAYKPEEIRWNEVAIESETGKLYRANFRDRQGRTVLILRPGMQNTKSIENQLRHLVYIIENAIINLPEGQEEMAWLIDFTGWSISNSVPIKTARETINILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFIDAKTFQKVKFVYPKNLESVELMRSYFDDVNLPTDFGGKAMLKYDHQEFSSLMAQDDVKTASFWGLNDKHQAATNGHHGAEVVPEPIGLVPPA 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9GRY8_POPTR (SEC14 cytosolic factor family protein OS=Populus trichocarpa GN=POPTR_0002s26250g PE=4 SV=2) HSP 1 Score: 468.389 bits (1204), Expect = 4.917e-158 Identity = 212/288 (73.61%), Postives = 250/288 (86.81%), Query Frame = -2 Query: 342 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPI 1205 MF +++ H+Q+NDSLQHESK+ EL+A + PLS L+YCTDAC RRYL+ARNWNVDK+KKMLEET+KWRSTYKPEEI WHE+AVEGETGK+YRANFHDR GRTVLILRPG QNT S+DNQ+RHL Y+IENA+LNLPE QEQM WLIDFTG S++ + PIKSARDT+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPK+ +SVELMRSYFD+ENLPT+FGG+AIL+Y+HEEFS+ M++DD K+A+ WGFD KLQ G + P P+ Sbjct: 1 MFLWRNNTSHDQENDSLQHESKINELKATIGPLSGHSLQYCTDACFRRYLDARNWNVDKAKKMLEETIKWRSTYKPEEICWHEVAVEGETGKIYRANFHDRQGRTVLILRPGMQNTKSIDNQMRHLTYLIENAVLNLPEGQEQMAWLIDFTGLSINNTPPIKSARDTVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKDNDSVELMRSYFDDENLPTEFGGRAILKYDHEEFSRLMIEDDAKAASFWGFDKKLQQAVNGHLGADGAPSPV 288
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A022QXY8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011028mg PE=4 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 4.026e-154 Identity = 216/297 (72.73%), Postives = 252/297 (84.85%), Query Frame = -2 Query: 321 VTMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1211 + F + + S H+ ++ LQ E K EL+A+L PLS R L++CTDACL+RYLEAR+WNVDKSKKMLEETL+WR+++KPEEIRWHEIA EGETGKV+RANF DR GR+VLILRPG QNTTSLDN ++HLVY+IENAILNL + QEQM WLIDFTG SLST+V IKSA+DT+N+LQNHYPERL +A LY+PPRIFEAFWK+VKYFLD KTFQKVKFVYPKNKESVELMRSYFD +NLPT+FGGKA LEY+H EFS+QM DD+KSA LWGFD K QS G G E+ PEP CLAP+AS Sbjct: 1 MMFFRKSTTSPHDGESLELQQERKFNELKASLGPLSGRNLQFCTDACLKRYLEARSWNVDKSKKMLEETLRWRTSFKPEEIRWHEIADEGETGKVFRANFRDRQGRSVLILRPGMQNTTSLDNNIKHLVYLIENAILNLQDGQEQMAWLIDFTGLSLSTNVSIKSAKDTVNILQNHYPERLGIAFLYSPPRIFEAFWKVVKYFLDPKTFQKVKFVYPKNKESVELMRSYFDVDNLPTEFGGKATLEYDHVEFSRQMALDDVKSAKLWGFDKK-QSNGF--GGAEVAPEPECLAPSAS 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: W9R1R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003333 PE=4 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 4.898e-154 Identity = 217/295 (73.56%), Postives = 249/295 (84.41%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R S+ H Q+NDS Q + + ELRAA+ PL+ R +YCTDAC RRYLEARNWN++KS+KMLE++LKWRST+KPEEIRW ++A+EGETGKVYRANFHDR GR+VLILRP +QNT SLDNQ+RHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSAR+T+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMR YFDEENLPTDFGGKA+L Y++EEFS+QM DD K+A LWG + KL SG PEP LAP AS Sbjct: 4 MFRRRSNFHQEQENDSSQQQITINELRAAIGPLTGRSSQYCTDACFRRYLEARNWNIEKSRKMLEDSLKWRSTFKPEEIRWDQVAIEGETGKVYRANFHDRHGRSVLILRPARQNTASLDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWTLSTSVPIKSARETVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDTKTFHKVKFVYPKNKDSVELMRQYFDEENLPTDFGGKAVLAYDYEEFSRQMALDDAKAAALWGSNEKLNHPTNGYSGAVAAPEPPSLAPPAS 298
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1MXV6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153 Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2 Query: 339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205 MF RWS+SH Q S L ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A WG D KL + N P + TP C Sbjct: 1 MFHRWSNSHQQDQGSSELCTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2PU80_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_008678 PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153 Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2 Query: 339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205 MF RWS+SH Q S L ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A WG D KL + N P + TP C Sbjct: 1 MFHRWSNSHQQDQGSSELYTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A072VE77_MEDTR (Sec14p-like phosphatidylinositol transfer family protein OS=Medicago truncatula GN=MTR_1g022185 PE=4 SV=1) HSP 1 Score: 454.136 bits (1167), Expect = 2.489e-152 Identity = 210/295 (71.19%), Postives = 245/295 (83.05%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK+KEL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+ PEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3T0C2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 2.714e-152 Identity = 210/295 (71.19%), Postives = 246/295 (83.39%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK++EL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+TPEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIEELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVTPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A067KR40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05319 PE=4 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 5.826e-152 Identity = 206/295 (69.83%), Postives = 244/295 (82.71%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R S ++Q+ND+ QH++KV EL+AAL PLS R L YCTDAC+RRYLEARNWNVDK+ KMLEETLKWR+TYKPEEIRWHEI+ EGETGKV+RANFHDR GRTVLI+RPGKQNTT ++ +RHLVY+IEN+ILNL E QEQM WLIDFTG SLS SV +++AR+ IN+LQNHYPERLA+A LYNPPRIFEAFWK++KYFLD KTFQKVKFVYPKNK+SVE MRS FD +NLP++FGGKA + Y+H EFS+ M +DD+K+A WGFD K G ++ PEP LAP AS Sbjct: 1 MFMRRKQSQNHQENDASQHDAKVSELKAALGPLSGRSLTYCTDACMRRYLEARNWNVDKAHKMLEETLKWRATYKPEEIRWHEISHEGETGKVFRANFHDRHGRTVLIMRPGKQNTTCAEDNIRHLVYLIENSILNLSEGQEQMSWLIDFTGLSLSNSVSVRTAREIINILQNHYPERLAIAFLYNPPRIFEAFWKVIKYFLDPKTFQKVKFVYPKNKDSVEFMRSLFDIDNLPSEFGGKATMNYDHHEFSRMMAEDDVKTAKYWGFDQKQSQIACGHLGAQVAPEPTPLAPPAS 295 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |