g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.011e-16 Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = -2 Query: 480 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVEL---MRSYFDEENLPTDFGGKAI 1148 ESK+ + R + + G K L R+L AR+++++K+ ML+E+L+WR EE R +I E +T V F HD+DGR + ILR G + L D L+ +++ E + + E + + +W L+D G S+ +K+ I ++ +YPE + ++ PR+F W IV F+D T + KF++ + + + + Y E +P+ GG I Sbjct: 230 ESKLVQFRKKIEETNHEG-KVPDYQTLLRFLRARDFSIEKAASMLQESLQWR-----EEHRIDDILGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENT--RSKFLFFGGPDCLHIEDGLEHYIPTEKIPSFLGGSCI 468
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 4.190e-16 Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = -2 Query: 483 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFV-YPKNKESVELMRSYFDEENLPTDFGGKA 1070 L R+L AR++++DK+ ML+E+L+WR +E R I E +T V F HD+DGR + ILR G + L D L+ +++ E + + E + + VW L+D G S+ +K+ I ++ +YPE + ++ PR+F W IV F+D T K F P + + + Y D + +P+ GG Sbjct: 258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSC 470
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 5.922e-16 Identity = 77/249 (30.92%), Postives = 119/249 (47.79%), Query Frame = -2 Query: 483 DSLQHESKVKELRAALRPLSDRG-LKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1163 DS Q E + ELR + L D G ++ D+ L R+L AR ++V +K+M E KWR Y + I + E + K Y +H D+DGR V G N TS + L++LV+ E+ + LP E ++D G S+S++ + S R+ + QN+YPER+ + N P F +++ K FLD T K+ F+ + + EL++ ENLP FGGK+ Sbjct: 30 DSAQ-EKALAELR---KLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPL---IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGKS 268
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_XENTR (SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.206e-15 Identity = 61/221 (27.60%), Postives = 108/221 (48.87%), Query Frame = -2 Query: 477 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM---VW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAIL 1079 D + R+L AR++N++K+++ML ++L WR ++ + I W V E Y A ++HD+DGR + ILR G+ +T L + LRH++ + E E+ Q +W L+D G ++ +K+ I V++ +YPE L ++ PR+F W +V F++ + QK N + + Y D+E +P GG+ + Sbjct: 273 DEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPPRVLEE----YYAGGWHYHDKDGRPLYILRLGQVDTKGLVKALGEEAILRHVLSINEEGQKRCEENTRQFGRPIWSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLIVRAPRVFPVLWTLVSPFINENSRQKFLIYSGNNYQGPGGIADYVDKEIVPDFLGGECVC 489
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.982e-14 Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = -2 Query: 456 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGE------TGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIE-NAILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079 D+ L R+L AR ++++ S +M ET +WR Y I +E E E K+Y +H D+DGR + G N T+ LR+LV E A +P + +LI D G SLS + + S +D ++ QN+YPER+ + + P F +K+VK FLD T K+ + K+ EL++ ENLP +GG ++L +++F Sbjct: 51 DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK--ELLKQ-IPIENLPVKYGGTSVLHNPNDKF 279
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.111e-14 Identity = 63/226 (27.88%), Postives = 104/226 (46.02%), Query Frame = -2 Query: 456 DACLRRYLEARNWNVDKSKKMLEETLKWR-STYKPEEIRW-----------HEIAVEGETGKVYRANFHDRDGRTVLILRP----GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079 D L R++ AR W+++K+ M+ +L+WR + KPE+I + I + E GK F D++G ++ +RP T + ++ L+ IE A L L E + L D +G+S++ P+K I + HYPE L ++ P IF W I+K +LD K+ F ++ + + E +P + GGK EYN + F Sbjct: 138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLLI--IEQARLFLKEPCDTATILFDLSGFSMANMDYAPVKF---LITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKD--EYNFDGF 350
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.252e-13 Identity = 66/255 (25.88%), Postives = 110/255 (43.14%), Query Frame = -2 Query: 459 HESKVKELRAALRPLSDRGLKYC---------TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGE-------------TGKVYRANFHDRDGRTVLILRP--GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEE 1151 H +V+++ + P GL+ C D L R+L AR WNV+ + +M +T+ WRS E+ EI + GK + D+ R V +R K S ++ R V+++E A L L E + D T +S+S ++ + I + HYPE L +++ P +F+ W I+K +LD KVKF + ++ Y + +N+ +FGG Y + E Sbjct: 94 HLERVEKIASEWDP---EGLRVCFWDAVNCDDPDGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.919e-13 Identity = 55/219 (25.11%), Postives = 103/219 (47.03%), Query Frame = -2 Query: 480 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYM-------IENAILNLPEDQEQMVWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAI 1079 D + R+L A ++++DK+++ML ++L WR ++ + + W A+ E Y +H D DGR + ILR G+ +T L + LRH++ + E + L L+D G ++ +K+ I V++++YPE L ++ PR+F W ++ F++ T +K N + + Y D E +P GG+++ Sbjct: 264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEE---FYAGGWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESV 479
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.969e-13 Identity = 54/220 (24.55%), Postives = 106/220 (48.18%), Query Frame = -2 Query: 474 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILE 1079 D + R+L AR++N+DK+++++ ++L WR ++ + I E + + Y A + HD+DGR + +LR G+ +T L + LR+++ + E + E+ + L+D G ++ +K+ I V++ +YPE L ++ PR+F W +V F+D T +K + + + Y D+E +P G+ + E Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYIL--ETWTPPQVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCE 494
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YGR1_SCHPO (CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.234e-13 Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = -2 Query: 441 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETG--------KVYRANFHDRDGRTVLILR-----PGKQNTTSLDNQLRHLVYMIENAILNLPEDQ---EQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPP---RIFEAFWKIVKYFLDAKTFQKVKFVYPK------NKESVEL-MRSYFDE----ENLPTDFGGKAILEYNHEEFSKQMV 1079 D L R+L+AR + V S ML + WR ++ I V GE G +Y D+ GR ++ L P K NT ++ ++Y +ENA L L +Q + ++ L+D T +S ++ + AR QN+YPE L A++ +FE W I KYFLD + KV F P + + + L M FDE E P + G E N+EE K+ V Sbjct: 52 DLTLLRFLKARKFVVTDSSDMLANAIVWR-----QQANLRSIMVRGENGLNQNFVKASMYFIWGQDKKGRAIVFLNLHNFIPPK-NTKDMEELKALILYAMENARLFLDSEQNAAKGVLGLVDLTYFS-RKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSKVTFCKPAQVSGYVDSKYIPLSMHGQFDETKLYERAPPETAGIGKPE-NYEELDKEYV 286
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0D2U6Y6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G010500 PE=4 SV=1) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 293/295 (99.32%), Postives = 294/295 (99.66%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPE QEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGT+QSGPEITPEPICLAPAAS Sbjct: 1 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEGQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTDQSGPEITPEPICLAPAAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B0P6U1_GOSAR (Cral-trio domain-containing c23b6.04c OS=Gossypium arboreum GN=F383_10739 PE=4 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 285/295 (96.61%), Postives = 292/295 (98.98%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWSHSHH+Q+ DSLQHESKVKELRAA+RPLSDRGLKYCTDACL RYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIA+EGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLA AVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIK+ATLWGFDNKLQSTGT+QSGP+ITPEPICLAPAAS Sbjct: 1 MFSRWSHSHHSQETDSLQHESKVKELRAAVRPLSDRGLKYCTDACLMRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAIEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLATAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKTATLWGFDNKLQSTGTDQSGPQITPEPICLAPAAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0D2TN34_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G202600 PE=4 SV=1) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 255/295 (86.44%), Postives = 274/295 (92.88%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS SHHN++NDSLQ ESK+KELRAA+ PLS R LKYCTDACLRRYLEARNWN DKSKKMLEETLKWRSTYKPEEIRWH++AVEGETGKVYRA+FHDR GRTVLILRPGKQNTTSLDNQLRHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSARDTIN+LQNHYPERL +A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFDEENLPT+FGGKA+LEYNHEEFSKQM QDDIKSA LWGFD+KLQ G SG ++ PEP+CLAP+AS Sbjct: 1 MFSRWSSSHHNKENDSLQQESKIKELRAAIGPLSGRSLKYCTDACLRRYLEARNWNADKSKKMLEETLKWRSTYKPEEIRWHKVAVEGETGKVYRASFHDRHGRTVLILRPGKQNTTSLDNQLRHLVYLIENAILNLPETQEQMAWLIDFTGWTLSTSVPIKSARDTINLLQNHYPERLVIAFLYNPPRIFEAFWKIVKYFMDAKTFQKVKFVYPKNTESVELMRSYFDEENLPTEFGGKAVLEYNHEEFSKQMNQDDIKSANLWGFDDKLQCIGNGHSGSDVAPEPVCLAPSAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B0P2Z4_GOSAR (Random slug 5 OS=Gossypium arboreum GN=F383_23926 PE=4 SV=1) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 254/295 (86.10%), Postives = 275/295 (93.22%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS+SHHN++NDSLQ ESK+KEL+AA+ PLS R LKYCTDACLRRYLEARNWN DKSKKMLEET+KWRSTYKPEEIRWHE+AVEGETGKVYRA+FHDR GRTVLILRPGKQNTTSLDNQLRHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSA DTIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFDEENLPT+FGGKA+LEYNHEEFSKQM QDDIKSA LWGFD+KLQ G SG ++ PEP+CLAP+AS Sbjct: 1 MFSRWSNSHHNKENDSLQQESKIKELQAAIGPLSGRSLKYCTDACLRRYLEARNWNADKSKKMLEETIKWRSTYKPEEIRWHEVAVEGETGKVYRASFHDRHGRTVLILRPGKQNTTSLDNQLRHLVYLIENAILNLPETQEQMAWLIDFTGWTLSTSVPIKSAHDTINLLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFMDAKTFQKVKFVYPKNTESVELMRSYFDEENLPTEFGGKAVLEYNHEEFSKQMSQDDIKSANLWGFDDKLQCIGNRHSGSDVAPEPVCLAPSAS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A061FCY0_THECC (Sec14p-like phosphatidylinositol transfer family protein isoform 1 OS=Theobroma cacao GN=TCM_034028 PE=4 SV=1) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 254/295 (86.10%), Postives = 273/295 (92.54%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MFSRWS+S+H Q+NDSLQHESKVKELRA+L PLS R L YCTDACLRRY+EARNWNVDKSKKMLEET+KWRS YKPEEIRWHE+AVEGETGKVYRANFHDR GRTVLILRPGKQNTTSLDNQ RHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSARDTINVLQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNK+SVELMRSYFDEENLPT+FGG+A+L+YNHEEFSKQM+QDDIKSA LWG D+KLQS G S E+ PEP+CLAP S Sbjct: 1 MFSRWSNSNHVQENDSLQHESKVKELRASLPPLSGRCLNYCTDACLRRYMEARNWNVDKSKKMLEETIKWRSIYKPEEIRWHEVAVEGETGKVYRANFHDRHGRTVLILRPGKQNTTSLDNQFRHLVYLIENAILNLPEGQEQMAWLIDFTGWTLSTSVPIKSARDTINVLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKDSVELMRSYFDEENLPTEFGGRAVLQYNHEEFSKQMIQDDIKSANLWGLDDKLQSVGNGHSLAEVAPEPVCLAPPVS 295
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: M5XYV3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009403mg PE=4 SV=1) HSP 1 Score: 487.649 bits (1254), Expect = 1.824e-165 Identity = 225/295 (76.27%), Postives = 252/295 (85.42%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF WS SHH Q ND LQHE K+ EL+AA+ PLS R L++CTDAC RRYLEARNWNVDK+KKMLEETL WRSTYKPEEI W E+A EGETGKVYRA+F DR GRTVLILRPG QNT S+DNQ+RHLVY+IENA+ NLPE QEQM WLIDFTGW+LST+VP+KSARDTIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELM+ YFDE+NLPT+FGG AIL Y+HEEFSK M QDD++SA WG D+KL G SG E+ PEP+CLAP AS Sbjct: 1 MFRLWSSSHH-QDNDPLQHEVKINELKAAIGPLSGRSLQFCTDACFRRYLEARNWNVDKAKKMLEETLNWRSTYKPEEICWREVANEGETGKVYRASFRDRSGRTVLILRPGMQNTVSIDNQMRHLVYLIENAVFNLPEGQEQMAWLIDFTGWTLSTTVPVKSARDTINILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMKQYFDEKNLPTEFGGHAILNYDHEEFSKLMTQDDVRSAAFWGRDDKLPHYGNGHSGAEVAPEPVCLAPVAS 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A067KQT3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04422 PE=4 SV=1) HSP 1 Score: 486.878 bits (1252), Expect = 3.706e-165 Identity = 226/294 (76.87%), Postives = 257/294 (87.41%), Query Frame = -2 Query: 324 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1205 MF RWS+S+ +QQ+ SLQ +SKV ELR A+ PLS R L+YC+DACLRRYLEAR+WNVDKSKKML+ETLKWRST+KPEEIRWHE+A+EGETGKVYRANFHDR GRTVLILRPG QNT S+DNQLRHLVY+IENAILNLPE QEQM WLIDFTGWS++ SVPIK+AR+TIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKN +SVE+M+SYFD+ENLP DFGGKAIL+Y+HEEFS+ M DD K+A+ WGFDNKLQ G E+ PEP L A Sbjct: 1 MFHRWSNSNQDQQDVSLQRDSKVNELRNAIGPLSGRSLQYCSDACLRRYLEARSWNVDKSKKMLQETLKWRSTFKPEEIRWHEVAIEGETGKVYRANFHDRLGRTVLILRPGMQNTKSIDNQLRHLVYLIENAILNLPEGQEQMAWLIDFTGWSITNSVPIKTARETINILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNVDSVEVMQSYFDDENLPADFGGKAILKYDHEEFSRLMSLDDDKAASFWGFDNKLQPVTNGHHGAEVAPEPNGLVSPA 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: V4T4X8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002080mg PE=4 SV=1) HSP 1 Score: 484.567 bits (1246), Expect = 1.892e-164 Identity = 222/276 (80.43%), Postives = 250/276 (90.58%), Query Frame = -2 Query: 345 QQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEP 1172 Q+++ HESKVKEL+AA+ PL R L+YC+DACL+RYLEARNWNVDK+KKMLEETLKWRSTY+PEEIRW+EIAVEGETGK++RA FHDR GRTVLILRPG QNT S+DNQ+RHLVY+IENAILNLPE QEQM WLIDFTGWSLSTSVPI+SAR+TIN+LQNHYPERLA+A LYNPPRIFEAFWK+VKYFLDAKTFQKVKFVYPKNK+SVE+M SYFDEENLPT+FGGKA L Y+HEEFSK M+QDD KSATLWGFD+KLQ G SG E+ PEP Sbjct: 9 QESEEHHHESKVKELKAAIGPLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYPERLAIAFLYNPPRIFEAFWKVVKYFLDAKTFQKVKFVYPKNKDSVEVMSSYFDEENLPTEFGGKATLHYDHEEFSKLMIQDDSKSATLWGFDDKLQRVGNGHSGAEVAPEP 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: F6H1I3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g12420 PE=4 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 2.100e-164 Identity = 224/295 (75.93%), Postives = 252/295 (85.42%), Query Frame = -2 Query: 324 TMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1208 TM W SHH+Q+ D + +SKV EL+AAL PLS R L+YC DACL+RYLEARNWNVDKSKKMLEETL WRSTYKPEEIRW ++A EGETGKV+RANFHDR GRTVLILRPGKQNTT+LDNQ+RHLVY++ENAILNLPEDQEQMVWLIDFTG + S SVPIK+ARDTIN+LQNHYPERL +A LY+PPRIFEAFWK VKY LDAKTFQKVKFVYPK+K SVELM SYFD ENLPTDFGGKA + Y+HEEFS+ M QDD+KSA LWGF +KLQ S E++PEP CLAPA+ Sbjct: 21 TMLRLWGKSHHDQEKDLQKSDSKVHELKAALGPLSGRSLQYCNDACLKRYLEARNWNVDKSKKMLEETLTWRSTYKPEEIRWSDVATEGETGKVFRANFHDRHGRTVLILRPGKQNTTALDNQVRHLVYLLENAILNLPEDQEQMVWLIDFTGMTFSNSVPIKTARDTINILQNHYPERLFLAFLYSPPRIFEAFWKAVKYLLDAKTFQKVKFVYPKDKNSVELMSSYFDVENLPTDFGGKATMNYDHEEFSRLMTQDDVKSANLWGFGDKLQHVSNGHSVAEVSPEPACLAPAS 315
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A059BNP3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01566 PE=4 SV=1) HSP 1 Score: 482.641 bits (1241), Expect = 2.260e-163 Identity = 221/298 (74.16%), Postives = 260/298 (87.25%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQST---GTNQSGPEITPEPICLAPAAS 1205 MF RWS+SHH++++DSLQ ESKV EL+ A+ PLS R LKYC DACLRRYLEARNWN+D +KKML +TLKWRS +KPEEI W E+A EGETGKVYRA+FHDR GR+VLILRPG QNT SLD+Q+RHLVY+IENAILNLPE QEQM WLIDFTGWSLS +VPIKSAR++IN+LQNHYPERLA+A LYNPPRIFEAFWK+VKYF++AKTFQKVKFVYPKNK+SVELMRS+FDEENLPT+FGG+A L+Y+HEEFS+ M QDDIK+A+LWGFD + + G SG E+ PEP+ +AP AS Sbjct: 1 MFRRWSNSHHSEEDDSLQFESKVNELKTAMGPLSGRSLKYCDDACLRRYLEARNWNIDNAKKMLADTLKWRSAFKPEEISWEEVANEGETGKVYRASFHDRYGRSVLILRPGMQNTQSLDDQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSNNVPIKSARESINILQNHYPERLAVAFLYNPPRIFEAFWKVVKYFMEAKTFQKVKFVYPKNKDSVELMRSFFDEENLPTEFGGRAKLKYDHEEFSRLMAQDDIKAASLWGFDRQPEKAFRDGNKHSGAEVAPEPVGVAPPAS 298 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
Pagesback to top
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |