g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.011e-16 Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = -2 Query: 480 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVEL---MRSYFDEENLPTDFGGKAI 1148 ESK+ + R + + G K L R+L AR+++++K+ ML+E+L+WR EE R +I E +T V F HD+DGR + ILR G + L D L+ +++ E + + E + + +W L+D G S+ +K+ I ++ +YPE + ++ PR+F W IV F+D T + KF++ + + + + Y E +P+ GG I Sbjct: 230 ESKLVQFRKKIEETNHEG-KVPDYQTLLRFLRARDFSIEKAASMLQESLQWR-----EEHRIDDILGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENT--RSKFLFFGGPDCLHIEDGLEHYIPTEKIPSFLGGSCI 468
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 4.190e-16 Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = -2 Query: 483 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFV-YPKNKESVELMRSYFDEENLPTDFGGKA 1070 L R+L AR++++DK+ ML+E+L+WR +E R I E +T V F HD+DGR + ILR G + L D L+ +++ E + + E + + VW L+D G S+ +K+ I ++ +YPE + ++ PR+F W IV F+D T K F P + + + Y D + +P+ GG Sbjct: 258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSC 470
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 5.922e-16 Identity = 77/249 (30.92%), Postives = 119/249 (47.79%), Query Frame = -2 Query: 483 DSLQHESKVKELRAALRPLSDRG-LKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1163 DS Q E + ELR + L D G ++ D+ L R+L AR ++V +K+M E KWR Y + I + E + K Y +H D+DGR V G N TS + L++LV+ E+ + LP E ++D G S+S++ + S R+ + QN+YPER+ + N P F +++ K FLD T K+ F+ + + EL++ ENLP FGGK+ Sbjct: 30 DSAQ-EKALAELR---KLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPL---IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGKS 268
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_XENTR (SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.206e-15 Identity = 61/221 (27.60%), Postives = 108/221 (48.87%), Query Frame = -2 Query: 477 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM---VW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAIL 1079 D + R+L AR++N++K+++ML ++L WR ++ + I W V E Y A ++HD+DGR + ILR G+ +T L + LRH++ + E E+ Q +W L+D G ++ +K+ I V++ +YPE L ++ PR+F W +V F++ + QK N + + Y D+E +P GG+ + Sbjct: 273 DEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPPRVLEE----YYAGGWHYHDKDGRPLYILRLGQVDTKGLVKALGEEAILRHVLSINEEGQKRCEENTRQFGRPIWSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLIVRAPRVFPVLWTLVSPFINENSRQKFLIYSGNNYQGPGGIADYVDKEIVPDFLGGECVC 489
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.982e-14 Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = -2 Query: 456 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGE------TGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIE-NAILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079 D+ L R+L AR ++++ S +M ET +WR Y I +E E E K+Y +H D+DGR + G N T+ LR+LV E A +P + +LI D G SLS + + S +D ++ QN+YPER+ + + P F +K+VK FLD T K+ + K+ EL++ ENLP +GG ++L +++F Sbjct: 51 DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK--ELLKQ-IPIENLPVKYGGTSVLHNPNDKF 279
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.111e-14 Identity = 63/226 (27.88%), Postives = 104/226 (46.02%), Query Frame = -2 Query: 456 DACLRRYLEARNWNVDKSKKMLEETLKWR-STYKPEEIRW-----------HEIAVEGETGKVYRANFHDRDGRTVLILRP----GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079 D L R++ AR W+++K+ M+ +L+WR + KPE+I + I + E GK F D++G ++ +RP T + ++ L+ IE A L L E + L D +G+S++ P+K I + HYPE L ++ P IF W I+K +LD K+ F ++ + + E +P + GGK EYN + F Sbjct: 138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLLI--IEQARLFLKEPCDTATILFDLSGFSMANMDYAPVKF---LITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKD--EYNFDGF 350
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.252e-13 Identity = 66/255 (25.88%), Postives = 110/255 (43.14%), Query Frame = -2 Query: 459 HESKVKELRAALRPLSDRGLKYC---------TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGE-------------TGKVYRANFHDRDGRTVLILRP--GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEE 1151 H +V+++ + P GL+ C D L R+L AR WNV+ + +M +T+ WRS E+ EI + GK + D+ R V +R K S ++ R V+++E A L L E + D T +S+S ++ + I + HYPE L +++ P +F+ W I+K +LD KVKF + ++ Y + +N+ +FGG Y + E Sbjct: 94 HLERVEKIASEWDP---EGLRVCFWDAVNCDDPDGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.919e-13 Identity = 55/219 (25.11%), Postives = 103/219 (47.03%), Query Frame = -2 Query: 480 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYM-------IENAILNLPEDQEQMVWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAI 1079 D + R+L A ++++DK+++ML ++L WR ++ + + W A+ E Y +H D DGR + ILR G+ +T L + LRH++ + E + L L+D G ++ +K+ I V++++YPE L ++ PR+F W ++ F++ T +K N + + Y D E +P GG+++ Sbjct: 264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEE---FYAGGWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESV 479
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.969e-13 Identity = 54/220 (24.55%), Postives = 106/220 (48.18%), Query Frame = -2 Query: 474 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILE 1079 D + R+L AR++N+DK+++++ ++L WR ++ + I E + + Y A + HD+DGR + +LR G+ +T L + LR+++ + E + E+ + L+D G ++ +K+ I V++ +YPE L ++ PR+F W +V F+D T +K + + + Y D+E +P G+ + E Sbjct: 277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYIL--ETWTPPQVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCE 494
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YGR1_SCHPO (CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.234e-13 Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = -2 Query: 441 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETG--------KVYRANFHDRDGRTVLILR-----PGKQNTTSLDNQLRHLVYMIENAILNLPEDQ---EQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPP---RIFEAFWKIVKYFLDAKTFQKVKFVYPK------NKESVEL-MRSYFDE----ENLPTDFGGKAILEYNHEEFSKQMV 1079 D L R+L+AR + V S ML + WR ++ I V GE G +Y D+ GR ++ L P K NT ++ ++Y +ENA L L +Q + ++ L+D T +S ++ + AR QN+YPE L A++ +FE W I KYFLD + KV F P + + + L M FDE E P + G E N+EE K+ V Sbjct: 52 DLTLLRFLKARKFVVTDSSDMLANAIVWR-----QQANLRSIMVRGENGLNQNFVKASMYFIWGQDKKGRAIVFLNLHNFIPPK-NTKDMEELKALILYAMENARLFLDSEQNAAKGVLGLVDLTYFS-RKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSKVTFCKPAQVSGYVDSKYIPLSMHGQFDETKLYERAPPETAGIGKPE-NYEELDKEYV 286
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2QLB5_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_009292 PE=4 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151 Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2 Query: 357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205 MF RWS+SH Q S L ESK+KEL+ + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A WG D KL + N + + Sbjct: 1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1M8D3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151 Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2 Query: 357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205 MF RWS+SH Q S L ESK+KEL+ + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A WG D KL + N + + Sbjct: 1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3SNJ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.853e-150 Identity = 209/295 (70.85%), Postives = 242/295 (82.03%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK+KEL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ TLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP KSAR+TI +LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+ PEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKGTLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPPKSARETIGILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: D7SPE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01720 PE=4 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 7.585e-150 Identity = 213/295 (72.20%), Postives = 247/295 (83.73%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R SH++++NDSLQ +KV ELRAAL PLS R L+YCTDACL RYLEARNWNVDK+KKMLEETLKWR+TYKPEEIRWHE+A EGETGKV RA+FHDR GRTVLI+RPG QNTTS +N +RHLVY+IEN+ILNL E QEQM WLIDFTGWSL+T+VPIK+ARD IN+LQNHYPERLA+ +LYNPPRIF AFWK+VKYFLD KTFQKVKFVYPKNKES+E+M+S FD ENLP +FGGKA L+Y+HEEFS+ M +DD+K+A+ WG D+K SG E P LAP AS Sbjct: 1 MFRR-RQSHNHEENDSLQRGAKVSELRAALGPLSGRSLQYCTDACLVRYLEARNWNVDKAKKMLEETLKWRATYKPEEIRWHEVAHEGETGKVSRADFHDRLGRTVLIMRPGMQNTTSAENNIRHLVYLIENSILNLREGQEQMSWLIDFTGWSLNTNVPIKTARDIINILQNHYPERLAICILYNPPRIFVAFWKVVKYFLDPKTFQKVKFVYPKNKESLEVMKSLFDVENLPGEFGGKATLKYDHEEFSRMMAEDDVKTASYWGLDSKPCHVTNGYSGAETMP----LAPPAS 290
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: R0GE21_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021373mg PE=4 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 1.326e-149 Identity = 216/298 (72.48%), Postives = 251/298 (84.23%), Query Frame = -2 Query: 330 MFSRWSHSHHNQQ--NDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGF----DNKLQSTGTNQSGPEITPEPICLAP 1205 MF RW +S +Q N+S E+K+KEL+A L LS R YC+DACL+RYLEARNWNV K+KKMLEETLKWRST+KPEEIRW E++ EGETGKVY+A FHDR GRTVLILRPG QNT SLD Q++HLVY+IENAILNLPEDQEQM WLIDFT WS+STSVPIKSAR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYF+DAKTF KVKFVYPKN ESVELM S+FDEENLPT+FGGKA+L+YN+EEFSKQM Q+D+K+A WG +N+LQ++ SG EI+PEPI P Sbjct: 1 MF-RWKNSSQTEQEHNESALREAKIKELKALLGQLSGRSSLYCSDACLKRYLEARNWNVVKAKKMLEETLKWRSTFKPEEIRWDEVSGEGETGKVYKAGFHDRHGRTVLILRPGLQNTKSLDKQMKHLVYLIENAILNLPEDQEQMSWLIDFTNWSMSTSVPIKSARETINILQNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFVYPKNPESVELMSSFFDEENLPTEFGGKALLQYNYEEFSKQMNQEDVKTANFWGLIHRNNNQLQAS-NGFSGAEISPEPIQTNP 296 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |