g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092016
Unique Nameg.barbadense_cottongen_reftransV1_0092016
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1941
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.011e-16
Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = -2
Query:  480 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVEL---MRSYFDEENLPTDFGGKAI 1148
            ESK+ + R  +   +  G K      L R+L AR+++++K+  ML+E+L+WR     EE R  +I  E +T  V    F      HD+DGR + ILR G  +   L      D  L+  +++ E  +  + E  +   + +W    L+D  G S+       +K+    I  ++ +YPE +   ++   PR+F   W IV  F+D  T  + KF++    + + +   +  Y   E +P+  GG  I
Sbjct:  230 ESKLVQFRKKIEETNHEG-KVPDYQTLLRFLRARDFSIEKAASMLQESLQWR-----EEHRIDDILGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENT--RSKFLFFGGPDCLHIEDGLEHYIPTEKIPSFLGGSCI 468          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 4.190e-16
Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = -2
Query:  483 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFV-YPKNKESVELMRSYFDEENLPTDFGGKA 1070
            L R+L AR++++DK+  ML+E+L+WR     +E R   I  E +T  V    F      HD+DGR + ILR G  +   L      D  L+  +++ E  +  + E  +   + VW    L+D  G S+       +K+    I  ++ +YPE +   ++   PR+F   W IV  F+D  T  K  F   P    + + +  Y D + +P+  GG  
Sbjct:  258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSC 470          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 5.922e-16
Identity = 77/249 (30.92%), Postives = 119/249 (47.79%), Query Frame = -2
Query:  483 DSLQHESKVKELRAALRPLSDRG-LKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1163
            DS Q E  + ELR   + L D G ++   D+ L R+L AR ++V  +K+M E   KWR  Y  + I     + E  +     K Y   +H  D+DGR V     G  N       TS +  L++LV+  E+ +   LP          E    ++D  G S+S++  + S  R+   + QN+YPER+    + N P  F   +++ K FLD  T  K+ F+   + +  EL++     ENLP  FGGK+
Sbjct:   30 DSAQ-EKALAELR---KLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPL---IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGKS 268          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_XENTR (SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.206e-15
Identity = 61/221 (27.60%), Postives = 108/221 (48.87%), Query Frame = -2
Query:  477 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM---VW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAIL 1079
            D  + R+L AR++N++K+++ML ++L WR  ++ + I   W    V  E    Y A   ++HD+DGR + ILR G+ +T  L      +  LRH++ + E       E+  Q    +W    L+D  G ++       +K+    I V++ +YPE L   ++   PR+F   W +V  F++  + QK       N +    +  Y D+E +P   GG+ + 
Sbjct:  273 DEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPPRVLEE----YYAGGWHYHDKDGRPLYILRLGQVDTKGLVKALGEEAILRHVLSINEEGQKRCEENTRQFGRPIWSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLIVRAPRVFPVLWTLVSPFINENSRQKFLIYSGNNYQGPGGIADYVDKEIVPDFLGGECVC 489          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.982e-14
Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = -2
Query:  456 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGE------TGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIE-NAILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079
            D+ L R+L AR ++++ S +M  ET +WR  Y    I   +E   E E        K+Y   +H  D+DGR +     G  N       T+    LR+LV   E  A   +P    +  +LI       D  G SLS +  + S  +D  ++ QN+YPER+    + + P  F   +K+VK FLD  T  K+  +    K+  EL++     ENLP  +GG ++L   +++F
Sbjct:   51 DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK--ELLKQ-IPIENLPVKYGGTSVLHNPNDKF 279          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.111e-14
Identity = 63/226 (27.88%), Postives = 104/226 (46.02%), Query Frame = -2
Query:  456 DACLRRYLEARNWNVDKSKKMLEETLKWR-STYKPEEIRW-----------HEIAVEGETGKVYRANFHDRDGRTVLILRP----GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079
            D  L R++ AR W+++K+  M+  +L+WR +  KPE+I +             I  + E GK     F D++G  ++ +RP        T +  ++   L+  IE A L L E  +    L D +G+S++     P+K     I   + HYPE L    ++  P IF   W I+K +LD     K+ F      ++   +  +   E +P + GGK   EYN + F
Sbjct:  138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLLI--IEQARLFLKEPCDTATILFDLSGFSMANMDYAPVKF---LITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKD--EYNFDGF 350          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.252e-13
Identity = 66/255 (25.88%), Postives = 110/255 (43.14%), Query Frame = -2
Query:  459 HESKVKELRAALRPLSDRGLKYC---------TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGE-------------TGKVYRANFHDRDGRTVLILRP--GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEE 1151
            H  +V+++ +   P    GL+ C          D  L R+L AR WNV+ + +M  +T+ WRS     E+   EI    +              GK +     D+  R V  +R    K    S ++  R  V+++E A L L    E    + D T +S+S ++     +  I   + HYPE L   +++  P +F+  W I+K +LD     KVKF       +   ++ Y + +N+  +FGG     Y + E
Sbjct:   94 HLERVEKIASEWDP---EGLRVCFWDAVNCDDPDGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.919e-13
Identity = 55/219 (25.11%), Postives = 103/219 (47.03%), Query Frame = -2
Query:  480 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYM-------IENAILNLPEDQEQMVWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAI 1079
            D  + R+L A ++++DK+++ML ++L WR  ++ + +   W   A+  E    Y   +H  D DGR + ILR G+ +T  L      +  LRH++ +        E +   L         L+D  G ++       +K+    I V++++YPE L   ++   PR+F   W ++  F++  T +K       N +    +  Y D E +P   GG+++
Sbjct:  264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEE---FYAGGWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESV 479          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.969e-13
Identity = 54/220 (24.55%), Postives = 106/220 (48.18%), Query Frame = -2
Query:  474 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILE 1079
            D  + R+L AR++N+DK+++++ ++L WR  ++ + I   E     +  + Y A   + HD+DGR + +LR G+ +T  L      +  LR+++ + E  +    E+ +           L+D  G ++       +K+    I V++ +YPE L   ++   PR+F   W +V  F+D  T +K       + +    +  Y D+E +P    G+ + E
Sbjct:  277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYIL--ETWTPPQVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCE 494          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YGR1_SCHPO (CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.234e-13
Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = -2
Query:  441 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETG--------KVYRANFHDRDGRTVLILR-----PGKQNTTSLDNQLRHLVYMIENAILNLPEDQ---EQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPP---RIFEAFWKIVKYFLDAKTFQKVKFVYPK------NKESVEL-MRSYFDE----ENLPTDFGGKAILEYNHEEFSKQMV 1079
            D  L R+L+AR + V  S  ML   + WR     ++     I V GE G         +Y     D+ GR ++ L      P K NT  ++     ++Y +ENA L L  +Q   + ++ L+D T +S   ++ +  AR      QN+YPE L  A++        +FE  W I KYFLD +   KV F  P       + + + L M   FDE    E  P +  G    E N+EE  K+ V
Sbjct:   52 DLTLLRFLKARKFVVTDSSDMLANAIVWR-----QQANLRSIMVRGENGLNQNFVKASMYFIWGQDKKGRAIVFLNLHNFIPPK-NTKDMEELKALILYAMENARLFLDSEQNAAKGVLGLVDLTYFS-RKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSKVTFCKPAQVSGYVDSKYIPLSMHGQFDETKLYERAPPETAGIGKPE-NYEELDKEYV 286          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2QLB5_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_009292 PE=4 SV=1)

HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151
Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2
Query:  357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205
            MF RWS+SH   Q  S L  ESK+KEL+  + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A  WG D KL +   N +   +
Sbjct:    1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1M8D3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151
Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2
Query:  357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205
            MF RWS+SH   Q  S L  ESK+KEL+  + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A  WG D KL +   N +   +
Sbjct:    1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3SNJ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 449.129 bits (1154), Expect = 1.853e-150
Identity = 209/295 (70.85%), Postives = 242/295 (82.03%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF+ W  S  +QQN     ESK+KEL+ A+ PLS   LKYCTDACL+RYLEARNWNVDKSKKML+ TLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP KSAR+TI +LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A  WG D KL++        E+ PEP+C    A+
Sbjct:    1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKGTLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPPKSARETIGILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: D7SPE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01720 PE=4 SV=1)

HSP 1 Score: 447.588 bits (1150), Expect = 7.585e-150
Identity = 213/295 (72.20%), Postives = 247/295 (83.73%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF R   SH++++NDSLQ  +KV ELRAAL PLS R L+YCTDACL RYLEARNWNVDK+KKMLEETLKWR+TYKPEEIRWHE+A EGETGKV RA+FHDR GRTVLI+RPG QNTTS +N +RHLVY+IEN+ILNL E QEQM WLIDFTGWSL+T+VPIK+ARD IN+LQNHYPERLA+ +LYNPPRIF AFWK+VKYFLD KTFQKVKFVYPKNKES+E+M+S FD ENLP +FGGKA L+Y+HEEFS+ M +DD+K+A+ WG D+K        SG E  P    LAP AS
Sbjct:    1 MFRR-RQSHNHEENDSLQRGAKVSELRAALGPLSGRSLQYCTDACLVRYLEARNWNVDKAKKMLEETLKWRATYKPEEIRWHEVAHEGETGKVSRADFHDRLGRTVLIMRPGMQNTTSAENNIRHLVYLIENSILNLREGQEQMSWLIDFTGWSLNTNVPIKTARDIINILQNHYPERLAICILYNPPRIFVAFWKVVKYFLDPKTFQKVKFVYPKNKESLEVMKSLFDVENLPGEFGGKATLKYDHEEFSRMMAEDDVKTASYWGLDSKPCHVTNGYSGAETMP----LAPPAS 290          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: R0GE21_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021373mg PE=4 SV=1)

HSP 1 Score: 447.203 bits (1149), Expect = 1.326e-149
Identity = 216/298 (72.48%), Postives = 251/298 (84.23%), Query Frame = -2
Query:  330 MFSRWSHSHHNQQ--NDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGF----DNKLQSTGTNQSGPEITPEPICLAP 1205
            MF RW +S   +Q  N+S   E+K+KEL+A L  LS R   YC+DACL+RYLEARNWNV K+KKMLEETLKWRST+KPEEIRW E++ EGETGKVY+A FHDR GRTVLILRPG QNT SLD Q++HLVY+IENAILNLPEDQEQM WLIDFT WS+STSVPIKSAR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYF+DAKTF KVKFVYPKN ESVELM S+FDEENLPT+FGGKA+L+YN+EEFSKQM Q+D+K+A  WG     +N+LQ++    SG EI+PEPI   P
Sbjct:    1 MF-RWKNSSQTEQEHNESALREAKIKELKALLGQLSGRSSLYCSDACLKRYLEARNWNVVKAKKMLEETLKWRSTFKPEEIRWDEVSGEGETGKVYKAGFHDRHGRTVLILRPGLQNTKSLDKQMKHLVYLIENAILNLPEDQEQMSWLIDFTNWSMSTSVPIKSARETINILQNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFVYPKNPESVELMSSFFDEENLPTEFGGKALLQYNYEEFSKQMNQEDVKTANFWGLIHRNNNQLQAS-NGFSGAEISPEPIQTNP 296          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RETM_AEDAE3.011e-1627.13Protein real-time OS=Aedes aegypti GN=retm PE=3 SV... [more]
RETM_ANOGA4.190e-1628.44Protein real-time OS=Anopheles gambiae GN=retm PE=... [more]
SEC14_YEAST5.922e-1630.92SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
S14L5_XENTR1.206e-1527.60SEC14-like protein 5 OS=Xenopus tropicalis GN=sec1... [more]
YKJ1_YEAST1.982e-1430.17CRAL-TRIO domain-containing protein YKL091C OS=Sac... [more]
CSR1_ASHGO2.111e-1427.88Phosphatidylinositol transfer protein CSR1 OS=Ashb... [more]
YAS2_SCHPO1.252e-1325.88CRAL-TRIO domain-containing protein C3H8.02 OS=Sch... [more]
S14L5_HUMAN1.919e-1325.11SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE... [more]
S14L1_HUMAN2.969e-1324.55SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE... [more]
YGR1_SCHPO4.234e-1330.04CRAL-TRIO domain-containing protein C365.01 OS=Sch... [more]

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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B2QLB5_GLYSO3.387e-15172.54Random slug protein 5 OS=Glycine soja GN=glysoja_0... [more]
I1M8D3_SOYBN3.387e-15172.54Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I3SNJ8_MEDTR1.853e-15070.85Uncharacterized protein OS=Medicago truncatula PE=... [more]
D7SPE3_VITVI7.585e-15072.20Putative uncharacterized protein OS=Vitis vinifera... [more]
R0GE21_9BRAS1.326e-14972.48Uncharacterized protein OS=Capsella rubella GN=CAR... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 87..242
e-value: 1.2E-48
score: 177.6
IPR001251CRAL-TRIO lipid binding domainGENE3D3.40.525.10coord: 69..258
e-value: 6.5E-49
score: 165.7
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 87..240
e-value: 1.4E-38
score: 131.9
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 81..245
score: 20.894
IPR001251CRAL-TRIO lipid binding domainSUPERFAMILY52087CRAL/TRIO domaincoord: 81..259
IPR011074CRAL/TRIO, N-terminal domainSMARTSM01100CRAL_TRIO_N_2coord: 42..67
e-value: 6.0E-8
score: 42.4
IPR011074CRAL/TRIO, N-terminal domainPFAMPF03765CRAL_TRIO_Ncoord: 41..66
e-value: 1.2E-6
score: 28.4
IPR011074CRAL/TRIO, N-terminal domainSUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 13..83
NoneNo IPR availableGENE3D1.10.8.20coord: 13..68
e-value: 9.1E-15
score: 54.0
NoneNo IPR availablePANTHERPTHR10174:SF151SUBFAMILY NOT NAMEDcoord: 9..269
NoneNo IPR availablePANTHERPTHR10174RETINALDEHYDE BINDING PROTEIN-RELATEDcoord: 9..269

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bp
AAATAAAAAAAATACTCACCTTACGACAATGCAACTAAAAAAATGACATT
GTAATAAATCTGAATTTAACAAAATAATTTTAACAATGTTAACGATCGTA
CCTGAATTTTGAAATCTTAAAAATAAAGGACTAAATTTATAGAAATAAAA
GCACAAAAAAATTAAATTCTAAATTTACGAAAAGTACAAAATTTGTAACA
TATTTTAACCCACCAAATAATGATTTTTTGGAGTAAAAACCAAAGCTGAA
AATTTATACCTCATGTCCCTTAAAAGGCTATATATATTTGTTACATAATA
AGCCAAGGGCGGTTAGATCAACTAGCTGCCGGTGCGAGACAGATTGGCTC
GGGTGTTATCTCGGGTCCAGACTGATTCGTACCGGTAGATTGAAGTTTAT
TATCAAATCCCCACAATGTGGCGGATTTAATATCATCTTGGACCATTTGC
TTTGAGAATTCTTCATGGTTATATTCCAATATGGCTTTTCCTCCAAAATC
TGTTGGGAGATTTTCTTCATCAAAATAGGATCTCATTAGCTCCACACTTT
CTTTGTTTTTAGGGTACACAAATTTCACCTTTTGGAAGGTTTTGGCATCG
AGGAAATATTTAACAATCTTCCAAAATGCTTCGAAAATTCTTGGCGGATT
GTATAGAACCGCCATCGCCAACCTTTCGGGATAGTGGTTTTGTAACACGT
TAATGGTGTCGCGAGCGGACTTGATTGGAACACTCGTGCTCAAGCTCCAG
CCGGTGAAATCTATCAACCATACCATCTGTTCTTGATCCTCTGGAAGGTT
TAATATAGCATTCTCAATCATATACACCAAATGACGGAGCTGATTGTCTA
AGGATGTAGTGTTCTGTTTTCCCGGTCGCAATATAAGAACAGTCCTACCG
TCTCGGTCGTGAAAATTTGCTCGGTATACTTTTCCAGTCTCGCCTTCTAC
TGCAATTTCATGCCAACGTATTTCCTCAGGCTTATAGGTTGATCTCCATT
TGAGTGTCTCTTCCAGCATTTTCTTCGATTTGTCGACATTCCAGTTTCGT
GCCTCCAAGTATCTCCTCAAGCAAGCATCGGTGCAATATTTCAAACCGCG
GTCGGATAGTGGTCTGAGTGCGGCTCTAAGCTCCTTAACCTTAGATTCAT
GCTGCAATGAATCATTCTGTTGGTTATGATGAGAATGGCTCCATCTACTA
AACATTGTGACTGATGCTAGAAATCTAGCAAAAACCTAGTGCAACCTGCA
AAACATTGCATAACACTAAATTGGAACTAATTATTAAGAATTAAACAATC
TCAAAGAAAACCAGACAAGTTGAGAGGAGATGACTCTTTCCAGGGAAATT
TGTAAAGTGTTGTCTATCCAGAGTAACAGACCCCTCAAGGGATAGGTATA
GTACTCGAATCAAGCCGAGGTTCACAGAATGAGTGCTTTAGGCAGACCAC
ACTTTTGGAGACTTCTTCATATGGAGTTAACCTATGGAACACAGACGAAA
TCTTAGGACATTAAACTTTGTATAAACGACCAGAAAAAGAGCCAACCTTC
CTTGAGTCTTGCCTGAGAAAAGAAACAGAGCAAAGACACTACTAAGCTTA
AAAGACAAGAAAAAGGGTTTGATCACTTGATGTTGATTTTTTTTTATCAC
TAAAGTAGCATGGAATTCTTCAACATGCCAAAACCAGTAAGTGAGTAGGT
ATGGCTTTTTATGGTTTTTTGGTCCAGAGATATTTCTTAAAAAAGAGTAG
CAAAAGGTGCACGGTATTCGTGGTAAAGGAGACTTGGTTGATGTTTTATG
GGTTTAGATTTTTCGGACAGGTGTTAAGGCCAAATGTTATTGCTGTCAAT
TTTATGACAGATTTGCAGGAAGCAGAACCTATAATTTTATGGTGAAGAAA
AACTCTTCATTTTCAGATTTCAGACAGAGAGTAGACAACAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR011074CRAL/TRIO_N_dom