g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0092016
Unique Nameg.barbadense_cottongen_reftransV1_0092016
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length1941
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.011e-16
Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = -2
Query:  480 ESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVEL---MRSYFDEENLPTDFGGKAI 1148
            ESK+ + R  +   +  G K      L R+L AR+++++K+  ML+E+L+WR     EE R  +I  E +T  V    F      HD+DGR + ILR G  +   L      D  L+  +++ E  +  + E  +   + +W    L+D  G S+       +K+    I  ++ +YPE +   ++   PR+F   W IV  F+D  T  + KF++    + + +   +  Y   E +P+  GG  I
Sbjct:  230 ESKLVQFRKKIEETNHEG-KVPDYQTLLRFLRARDFSIEKAASMLQESLQWR-----EEHRIDDILGEYKTPVVVEKYFPGGWHHHDKDGRPLYILRLGNMDVKGLLKSVGEDELLKLTLHICEEGLKLMKEATKLFGKPIWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVEKNYPETMGRVLIVRAPRVFPVLWTIVSAFIDENT--RSKFLFFGGPDCLHIEDGLEHYIPTEKIPSFLGGSCI 468          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_ANOGA (Protein real-time OS=Anopheles gambiae GN=retm PE=3 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 4.190e-16
Identity = 62/218 (28.44%), Postives = 102/218 (46.79%), Query Frame = -2
Query:  483 LRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANF------HDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQE---QMVW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFV-YPKNKESVELMRSYFDEENLPTDFGGKA 1070
            L R+L AR++++DK+  ML+E+L+WR     +E R   I  E +T  V    F      HD+DGR + ILR G  +   L      D  L+  +++ E  +  + E  +   + VW    L+D  G S+       +K+    I  ++ +YPE +   ++   PR+F   W IV  F+D  T  K  F   P    + + +  Y D + +P+  GG  
Sbjct:  258 LLRFLRARDFSIDKATGMLQESLQWR-----KEQRIDSILGEYKTPAVVEKYFPGGWHHHDKDGRPLYILRLGTMDVKGLLKSVGEDELLKLTLHICEEGLRLMKEATKLFGKPVWNWCLLVDLDGLSMRHLWRPGVKALLRIIETVETNYPETMGRVLIVRAPRVFPVLWTIVSTFIDENTRSKFLFFGGPDCMHAEDGIEQYIDTDKIPSFLGGSC 470          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 5.922e-16
Identity = 77/249 (30.92%), Postives = 119/249 (47.79%), Query Frame = -2
Query:  483 DSLQHESKVKELRAALRPLSDRG-LKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIENAI-LNLPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1163
            DS Q E  + ELR   + L D G ++   D+ L R+L AR ++V  +K+M E   KWR  Y  + I     + E  +     K Y   +H  D+DGR V     G  N       TS +  L++LV+  E+ +   LP          E    ++D  G S+S++  + S  R+   + QN+YPER+    + N P  F   +++ K FLD  T  K+ F+   + +  EL++     ENLP  FGGK+
Sbjct:   30 DSAQ-EKALAELR---KLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPL---IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGKS 268          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_XENTR (SEC14-like protein 5 OS=Xenopus tropicalis GN=sec14l1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.206e-15
Identity = 61/221 (27.60%), Postives = 108/221 (48.87%), Query Frame = -2
Query:  477 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM---VW----LIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAIL 1079
            D  + R+L AR++N++K+++ML ++L WR  ++ + I   W    V  E    Y A   ++HD+DGR + ILR G+ +T  L      +  LRH++ + E       E+  Q    +W    L+D  G ++       +K+    I V++ +YPE L   ++   PR+F   W +V  F++  + QK       N +    +  Y D+E +P   GG+ + 
Sbjct:  273 DEHILRFLRARDFNMEKAREMLCQSLSWRKQHQVDYILQTWQPPRVLEE----YYAGGWHYHDKDGRPLYILRLGQVDTKGLVKALGEEAILRHVLSINEEGQKRCEENTRQFGRPIWSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLIVRAPRVFPVLWTLVSPFINENSRQKFLIYSGNNYQGPGGIADYVDKEIVPDFLGGECVC 489          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.982e-14
Identity = 70/232 (30.17%), Postives = 110/232 (47.41%), Query Frame = -2
Query:  456 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI-RWHEIAVEGE------TGKVYRANFH--DRDGRTVLILRPGKQN------TTSLDNQLRHLVYMIE-NAILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079
            D+ L R+L AR ++++ S +M  ET +WR  Y    I   +E   E E        K+Y   +H  D+DGR +     G  N       T+    LR+LV   E  A   +P    +  +LI       D  G SLS +  + S  +D  ++ QN+YPER+    + + P  F   +K+VK FLD  T  K+  +    K+  EL++     ENLP  +GG ++L   +++F
Sbjct:   51 DSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKK--ELLKQ-IPIENLPVKYGGTSVLHNPNDKF 279          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: CSR1_ASHGO (Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.111e-14
Identity = 63/226 (27.88%), Postives = 104/226 (46.02%), Query Frame = -2
Query:  456 DACLRRYLEARNWNVDKSKKMLEETLKWR-STYKPEEIRW-----------HEIAVEGETGKVYRANFHDRDGRTVLILRP----GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTS--VPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEF 1079
            D  L R++ AR W+++K+  M+  +L+WR +  KPE+I +             I  + E GK     F D++G  ++ +RP        T +  ++   L+  IE A L L E  +    L D +G+S++     P+K     I   + HYPE L    ++  P IF   W I+K +LD     K+ F      ++   +  +   E +P + GGK   EYN + F
Sbjct:  138 DNLLLRFVRARKWDINKAMIMMAHSLRWRLNEGKPEDIVFGGERGAQKADKKGIVKQLELGKATVRGF-DKNGCPIVYVRPRLHHAADQTEAETSEYSLLI--IEQARLFLKEPCDTATILFDLSGFSMANMDYAPVKF---LITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAADLEEFIPAEQIPLELGGKD--EYNFDGF 350          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YAS2_SCHPO (CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.252e-13
Identity = 66/255 (25.88%), Postives = 110/255 (43.14%), Query Frame = -2
Query:  459 HESKVKELRAALRPLSDRGLKYC---------TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGE-------------TGKVYRANFHDRDGRTVLILRP--GKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEE 1151
            H  +V+++ +   P    GL+ C          D  L R+L AR WNV+ + +M  +T+ WRS     E+   EI    +              GK +     D+  R V  +R    K    S ++  R  V+++E A L L    E    + D T +S+S ++     +  I   + HYPE L   +++  P +F+  W I+K +LD     KVKF       +   ++ Y + +N+  +FGG     Y + E
Sbjct:   94 HLERVEKIASEWDP---EGLRVCFWDAVNCDDPDGLLLRFLRARKWNVEAALEMFMKTVHWRS----REMNVGEIVCNADHLDKDDDFVRQLRIGKCFIFG-EDKHNRPVCYIRARLHKVGDVSPESVERLTVWVMETARLILKPPIETATVVFDMTDFSMS-NMDYGPLKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFT-----RNYRDLQQYINPDNILKEFGGPNPWRYTYPE 334          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.919e-13
Identity = 55/219 (25.11%), Postives = 103/219 (47.03%), Query Frame = -2
Query:  480 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI--RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYM-------IENAILNLPEDQEQMVWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAI 1079
            D  + R+L A ++++DK+++ML ++L WR  ++ + +   W   A+  E    Y   +H  D DGR + ILR G+ +T  L      +  LRH++ +        E +   L         L+D  G ++       +K+    I V++++YPE L   ++   PR+F   W ++  F++  T +K       N +    +  Y D E +P   GG+++
Sbjct:  264 DEHILRFLRAHDFHLDKAREMLRQSLSWRKQHQVDLLLQTWQPPALLEE---FYAGGWHYQDIDGRPLYILRLGQMDTKGLMKAVGEEALLRHVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPFINENTRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESV 479          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.969e-13
Identity = 54/220 (24.55%), Postives = 106/220 (48.18%), Query Frame = -2
Query:  474 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRA---NFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILE 1079
            D  + R+L AR++N+DK+++++ ++L WR  ++ + I   E     +  + Y A   + HD+DGR + +LR G+ +T  L      +  LR+++ + E  +    E+ +           L+D  G ++       +K+    I V++ +YPE L   ++   PR+F   W +V  F+D  T +K       + +    +  Y D+E +P    G+ + E
Sbjct:  277 DEHILRFLRARDFNIDKAREIMCQSLTWRKQHQVDYIL--ETWTPPQVLQDYYAGGWHHHDKDGRPLYVLRLGQMDTKGLVRALGEEALLRYVLSINEEGLRRCEENTKVFGRPISSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEANYPETLGRLLILRAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCE 494          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YGR1_SCHPO (CRAL-TRIO domain-containing protein C365.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.01 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.234e-13
Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = -2
Query:  441 DACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETG--------KVYRANFHDRDGRTVLILR-----PGKQNTTSLDNQLRHLVYMIENAILNLPEDQ---EQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPP---RIFEAFWKIVKYFLDAKTFQKVKFVYPK------NKESVEL-MRSYFDE----ENLPTDFGGKAILEYNHEEFSKQMV 1079
            D  L R+L+AR + V  S  ML   + WR     ++     I V GE G         +Y     D+ GR ++ L      P K NT  ++     ++Y +ENA L L  +Q   + ++ L+D T +S   ++ +  AR      QN+YPE L  A++        +FE  W I KYFLD +   KV F  P       + + + L M   FDE    E  P +  G    E N+EE  K+ V
Sbjct:   52 DLTLLRFLKARKFVVTDSSDMLANAIVWR-----QQANLRSIMVRGENGLNQNFVKASMYFIWGQDKKGRAIVFLNLHNFIPPK-NTKDMEELKALILYAMENARLFLDSEQNAAKGVLGLVDLTYFS-RKNIDLDFARVFAETFQNYYPEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSKVTFCKPAQVSGYVDSKYIPLSMHGQFDETKLYERAPPETAGIGKPE-NYEELDKEYV 286          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A068UGW9_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_26 OS=Coffea canephora GN=GSCOC_T00024802001 PE=4 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 1.564e-162
Identity = 223/295 (75.59%), Postives = 259/295 (87.80%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF RW++SHH  + DS + + KV EL+AAL PLS RGL+YC+DACL+RYLEAR+WNVDK+KKMLEETL+WRSTYKPEEIRWHE+AVEGETGKV+RANFHDR GRTVLILRPGKQNTTS+DNQ+RHLVY+IENAILNLPE QEQM WLIDFTGWS++ +VPIKSA+DT+NVLQNHYPERLA+A LY+PPRIFEAFWKIVK+FLD KTFQKVKFVYPKNK+SVELMRSYFD +NLPT+FGGKA L+Y+HEEFS+QM QDD+K+A +WGFD          +G E+ PEP  LA  AS
Sbjct:    1 MFRRWNNSHH--EKDSDEQQEKVTELKAALGPLSGRGLQYCSDACLKRYLEARSWNVDKAKKMLEETLRWRSTYKPEEIRWHEVAVEGETGKVFRANFHDRHGRTVLILRPGKQNTTSIDNQIRHLVYLIENAILNLPEGQEQMAWLIDFTGWSITNNVPIKSAKDTVNVLQNHYPERLAVAFLYSPPRIFEAFWKIVKFFLDPKTFQKVKFVYPKNKDSVELMRSYFDVDNLPTEFGGKATLQYDHEEFSRQMAQDDVKAAKVWGFDKHPNGF----TGAEVAPEPETLASPAS 289          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9R7T6_RICCO (Transporter, putative OS=Ricinus communis GN=RCOM_1594180 PE=4 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 2.232e-162
Identity = 218/294 (74.15%), Postives = 256/294 (87.07%), Query Frame = -2
Query:  324 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1205
            MF RWS+SH +Q+++SL+ +SK+ ELR  + PLS R L+YCTDACLRRYLEAR+WNVDKSKKMLEETLKWRS YKPEEIRW+E+A+E ETGK+YRANF DR GRTVLILRPG QNT S++NQLRHLVY+IENAI+NLPE QE+M WLIDFTGWS+S SVPIK+AR+TIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFD+ NLPTDFGGKA+L+Y+H+EFS  M QDD+K+A+ WG ++K Q+      G E+ PEPI L P A
Sbjct:    1 MFHRWSNSHKDQEDESLKQKSKINELRNVIGPLSGRSLQYCTDACLRRYLEARSWNVDKSKKMLEETLKWRSAYKPEEIRWNEVAIESETGKLYRANFRDRQGRTVLILRPGMQNTKSIENQLRHLVYIIENAIINLPEGQEEMAWLIDFTGWSISNSVPIKTARETINILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFIDAKTFQKVKFVYPKNLESVELMRSYFDDVNLPTDFGGKAMLKYDHQEFSSLMAQDDVKTASFWGLNDKHQAATNGHHGAEVVPEPIGLVPPA 294          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9GRY8_POPTR (SEC14 cytosolic factor family protein OS=Populus trichocarpa GN=POPTR_0002s26250g PE=4 SV=2)

HSP 1 Score: 468.389 bits (1204), Expect = 4.917e-158
Identity = 212/288 (73.61%), Postives = 250/288 (86.81%), Query Frame = -2
Query:  342 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPI 1205
            MF   +++ H+Q+NDSLQHESK+ EL+A + PLS   L+YCTDAC RRYL+ARNWNVDK+KKMLEET+KWRSTYKPEEI WHE+AVEGETGK+YRANFHDR GRTVLILRPG QNT S+DNQ+RHL Y+IENA+LNLPE QEQM WLIDFTG S++ + PIKSARDT+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPK+ +SVELMRSYFD+ENLPT+FGG+AIL+Y+HEEFS+ M++DD K+A+ WGFD KLQ       G +  P P+
Sbjct:    1 MFLWRNNTSHDQENDSLQHESKINELKATIGPLSGHSLQYCTDACFRRYLDARNWNVDKAKKMLEETIKWRSTYKPEEICWHEVAVEGETGKIYRANFHDRQGRTVLILRPGMQNTKSIDNQMRHLTYLIENAVLNLPEGQEQMAWLIDFTGLSINNTPPIKSARDTVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKDNDSVELMRSYFDDENLPTEFGGRAILKYDHEEFSRLMIEDDAKAASFWGFDKKLQQAVNGHLGADGAPSPV 288          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A022QXY8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011028mg PE=4 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 4.026e-154
Identity = 216/297 (72.73%), Postives = 252/297 (84.85%), Query Frame = -2
Query:  321 VTMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1211
            +  F + + S H+ ++  LQ E K  EL+A+L PLS R L++CTDACL+RYLEAR+WNVDKSKKMLEETL+WR+++KPEEIRWHEIA EGETGKV+RANF DR GR+VLILRPG QNTTSLDN ++HLVY+IENAILNL + QEQM WLIDFTG SLST+V IKSA+DT+N+LQNHYPERL +A LY+PPRIFEAFWK+VKYFLD KTFQKVKFVYPKNKESVELMRSYFD +NLPT+FGGKA LEY+H EFS+QM  DD+KSA LWGFD K QS G    G E+ PEP CLAP+AS
Sbjct:    1 MMFFRKSTTSPHDGESLELQQERKFNELKASLGPLSGRNLQFCTDACLKRYLEARSWNVDKSKKMLEETLRWRTSFKPEEIRWHEIADEGETGKVFRANFRDRQGRSVLILRPGMQNTTSLDNNIKHLVYLIENAILNLQDGQEQMAWLIDFTGLSLSTNVSIKSAKDTVNILQNHYPERLGIAFLYSPPRIFEAFWKVVKYFLDPKTFQKVKFVYPKNKESVELMRSYFDVDNLPTEFGGKATLEYDHVEFSRQMALDDVKSAKLWGFDKK-QSNGF--GGAEVAPEPECLAPSAS 294          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: W9R1R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003333 PE=4 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 4.898e-154
Identity = 217/295 (73.56%), Postives = 249/295 (84.41%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF R S+ H  Q+NDS Q +  + ELRAA+ PL+ R  +YCTDAC RRYLEARNWN++KS+KMLE++LKWRST+KPEEIRW ++A+EGETGKVYRANFHDR GR+VLILRP +QNT SLDNQ+RHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSAR+T+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMR YFDEENLPTDFGGKA+L Y++EEFS+QM  DD K+A LWG + KL       SG    PEP  LAP AS
Sbjct:    4 MFRRRSNFHQEQENDSSQQQITINELRAAIGPLTGRSSQYCTDACFRRYLEARNWNIEKSRKMLEDSLKWRSTFKPEEIRWDQVAIEGETGKVYRANFHDRHGRSVLILRPARQNTASLDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWTLSTSVPIKSARETVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDTKTFHKVKFVYPKNKDSVELMRQYFDEENLPTDFGGKAVLAYDYEEFSRQMALDDAKAAALWGSNEKLNHPTNGYSGAVAAPEPPSLAPPAS 298          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1MXV6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153
Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2
Query:  339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205
            MF RWS+SH   Q  S L  ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A  WG D KL +   N   P +   TP   C
Sbjct:    1 MFHRWSNSHQQDQGSSELCTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2PU80_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_008678 PE=4 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153
Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2
Query:  339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205
            MF RWS+SH   Q  S L  ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A  WG D KL +   N   P +   TP   C
Sbjct:    1 MFHRWSNSHQQDQGSSELYTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A072VE77_MEDTR (Sec14p-like phosphatidylinositol transfer family protein OS=Medicago truncatula GN=MTR_1g022185 PE=4 SV=1)

HSP 1 Score: 454.136 bits (1167), Expect = 2.489e-152
Identity = 210/295 (71.19%), Postives = 245/295 (83.05%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF+ W  S  +QQN     ESK+KEL+ A+ PLS   LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A  WG D KL++        E+ PEP+C    A+
Sbjct:    1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3T0C2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 453.751 bits (1166), Expect = 2.714e-152
Identity = 210/295 (71.19%), Postives = 246/295 (83.39%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF+ W  S  +QQN     ESK++EL+ A+ PLS   LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP  QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A  WG D KL++        E+TPEP+C    A+
Sbjct:    1 MFNLWGGSQQDQQNKEAYAESKIEELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVTPEPVCSETPAT 293          
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A067KR40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05319 PE=4 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 5.826e-152
Identity = 206/295 (69.83%), Postives = 244/295 (82.71%), Query Frame = -2
Query:  321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205
            MF R   S ++Q+ND+ QH++KV EL+AAL PLS R L YCTDAC+RRYLEARNWNVDK+ KMLEETLKWR+TYKPEEIRWHEI+ EGETGKV+RANFHDR GRTVLI+RPGKQNTT  ++ +RHLVY+IEN+ILNL E QEQM WLIDFTG SLS SV +++AR+ IN+LQNHYPERLA+A LYNPPRIFEAFWK++KYFLD KTFQKVKFVYPKNK+SVE MRS FD +NLP++FGGKA + Y+H EFS+ M +DD+K+A  WGFD K         G ++ PEP  LAP AS
Sbjct:    1 MFMRRKQSQNHQENDASQHDAKVSELKAALGPLSGRSLTYCTDACMRRYLEARNWNVDKAHKMLEETLKWRATYKPEEIRWHEISHEGETGKVFRANFHDRHGRTVLIMRPGKQNTTCAEDNIRHLVYLIENSILNLSEGQEQMSWLIDFTGLSLSNSVSVRTAREIINILQNHYPERLAIAFLYNPPRIFEAFWKVIKYFLDPKTFQKVKFVYPKNKDSVEFMRSLFDIDNLPSEFGGKATMNYDHHEFSRMMAEDDVKTAKYWGFDQKQSQIACGHLGAQVAPEPTPLAPPAS 295          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
RETM_AEDAE3.011e-1627.13Protein real-time OS=Aedes aegypti GN=retm PE=3 SV... [more]
RETM_ANOGA4.190e-1628.44Protein real-time OS=Anopheles gambiae GN=retm PE=... [more]
SEC14_YEAST5.922e-1630.92SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
S14L5_XENTR1.206e-1527.60SEC14-like protein 5 OS=Xenopus tropicalis GN=sec1... [more]
YKJ1_YEAST1.982e-1430.17CRAL-TRIO domain-containing protein YKL091C OS=Sac... [more]
CSR1_ASHGO2.111e-1427.88Phosphatidylinositol transfer protein CSR1 OS=Ashb... [more]
YAS2_SCHPO1.252e-1325.88CRAL-TRIO domain-containing protein C3H8.02 OS=Sch... [more]
S14L5_HUMAN1.919e-1325.11SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE... [more]
S14L1_HUMAN2.969e-1324.55SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE... [more]
YGR1_SCHPO4.234e-1330.04CRAL-TRIO domain-containing protein C365.01 OS=Sch... [more]

Pages

back to top
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068UGW9_COFCA1.564e-16275.59Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
B9R7T6_RICCO2.232e-16274.15Transporter, putative OS=Ricinus communis GN=RCOM_... [more]
B9GRY8_POPTR4.917e-15873.61SEC14 cytosolic factor family protein OS=Populus t... [more]
A0A022QXY8_ERYGU4.026e-15472.73Uncharacterized protein OS=Erythranthe guttata GN=... [more]
W9R1R7_9ROSA4.898e-15473.56Uncharacterized protein OS=Morus notabilis GN=L484... [more]
I1MXV6_SOYBN1.030e-15372.35Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2PU80_GLYSO1.030e-15372.35Random slug protein 5 OS=Glycine soja GN=glysoja_0... [more]
A0A072VE77_MEDTR2.489e-15271.19Sec14p-like phosphatidylinositol transfer family p... [more]
I3T0C2_MEDTR2.714e-15271.19Uncharacterized protein OS=Medicago truncatula PE=... [more]
A0A067KR40_JATCU5.826e-15269.83Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 87..242
e-value: 1.2E-48
score: 177.6
IPR001251CRAL-TRIO lipid binding domainGENE3D3.40.525.10coord: 69..258
e-value: 6.5E-49
score: 165.7
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 87..240
e-value: 1.4E-38
score: 131.9
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 81..245
score: 20.894
IPR001251CRAL-TRIO lipid binding domainSUPERFAMILY52087CRAL/TRIO domaincoord: 81..259
IPR011074CRAL/TRIO, N-terminal domainSMARTSM01100CRAL_TRIO_N_2coord: 42..67
e-value: 6.0E-8
score: 42.4
IPR011074CRAL/TRIO, N-terminal domainPFAMPF03765CRAL_TRIO_Ncoord: 41..66
e-value: 1.2E-6
score: 28.4
IPR011074CRAL/TRIO, N-terminal domainSUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 13..83
NoneNo IPR availableGENE3D1.10.8.20coord: 13..68
e-value: 9.1E-15
score: 54.0
NoneNo IPR availablePANTHERPTHR10174:SF151SUBFAMILY NOT NAMEDcoord: 9..269
NoneNo IPR availablePANTHERPTHR10174RETINALDEHYDE BINDING PROTEIN-RELATEDcoord: 9..269

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bp
AAATAAAAAAAATACTCACCTTACGACAATGCAACTAAAAAAATGACATT
GTAATAAATCTGAATTTAACAAAATAATTTTAACAATGTTAACGATCGTA
CCTGAATTTTGAAATCTTAAAAATAAAGGACTAAATTTATAGAAATAAAA
GCACAAAAAAATTAAATTCTAAATTTACGAAAAGTACAAAATTTGTAACA
TATTTTAACCCACCAAATAATGATTTTTTGGAGTAAAAACCAAAGCTGAA
AATTTATACCTCATGTCCCTTAAAAGGCTATATATATTTGTTACATAATA
AGCCAAGGGCGGTTAGATCAACTAGCTGCCGGTGCGAGACAGATTGGCTC
GGGTGTTATCTCGGGTCCAGACTGATTCGTACCGGTAGATTGAAGTTTAT
TATCAAATCCCCACAATGTGGCGGATTTAATATCATCTTGGACCATTTGC
TTTGAGAATTCTTCATGGTTATATTCCAATATGGCTTTTCCTCCAAAATC
TGTTGGGAGATTTTCTTCATCAAAATAGGATCTCATTAGCTCCACACTTT
CTTTGTTTTTAGGGTACACAAATTTCACCTTTTGGAAGGTTTTGGCATCG
AGGAAATATTTAACAATCTTCCAAAATGCTTCGAAAATTCTTGGCGGATT
GTATAGAACCGCCATCGCCAACCTTTCGGGATAGTGGTTTTGTAACACGT
TAATGGTGTCGCGAGCGGACTTGATTGGAACACTCGTGCTCAAGCTCCAG
CCGGTGAAATCTATCAACCATACCATCTGTTCTTGATCCTCTGGAAGGTT
TAATATAGCATTCTCAATCATATACACCAAATGACGGAGCTGATTGTCTA
AGGATGTAGTGTTCTGTTTTCCCGGTCGCAATATAAGAACAGTCCTACCG
TCTCGGTCGTGAAAATTTGCTCGGTATACTTTTCCAGTCTCGCCTTCTAC
TGCAATTTCATGCCAACGTATTTCCTCAGGCTTATAGGTTGATCTCCATT
TGAGTGTCTCTTCCAGCATTTTCTTCGATTTGTCGACATTCCAGTTTCGT
GCCTCCAAGTATCTCCTCAAGCAAGCATCGGTGCAATATTTCAAACCGCG
GTCGGATAGTGGTCTGAGTGCGGCTCTAAGCTCCTTAACCTTAGATTCAT
GCTGCAATGAATCATTCTGTTGGTTATGATGAGAATGGCTCCATCTACTA
AACATTGTGACTGATGCTAGAAATCTAGCAAAAACCTAGTGCAACCTGCA
AAACATTGCATAACACTAAATTGGAACTAATTATTAAGAATTAAACAATC
TCAAAGAAAACCAGACAAGTTGAGAGGAGATGACTCTTTCCAGGGAAATT
TGTAAAGTGTTGTCTATCCAGAGTAACAGACCCCTCAAGGGATAGGTATA
GTACTCGAATCAAGCCGAGGTTCACAGAATGAGTGCTTTAGGCAGACCAC
ACTTTTGGAGACTTCTTCATATGGAGTTAACCTATGGAACACAGACGAAA
TCTTAGGACATTAAACTTTGTATAAACGACCAGAAAAAGAGCCAACCTTC
CTTGAGTCTTGCCTGAGAAAAGAAACAGAGCAAAGACACTACTAAGCTTA
AAAGACAAGAAAAAGGGTTTGATCACTTGATGTTGATTTTTTTTTATCAC
TAAAGTAGCATGGAATTCTTCAACATGCCAAAACCAGTAAGTGAGTAGGT
ATGGCTTTTTATGGTTTTTTGGTCCAGAGATATTTCTTAAAAAAGAGTAG
CAAAAGGTGCACGGTATTCGTGGTAAAGGAGACTTGGTTGATGTTTTATG
GGTTTAGATTTTTCGGACAGGTGTTAAGGCCAAATGTTATTGCTGTCAAT
TTTATGACAGATTTGCAGGAAGCAGAACCTATAATTTTATGGTGAAGAAA
AACTCTTCATTTTCAGATTTCAGACAGAGAGTAGACAACAG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR011074CRAL/TRIO_N_dom