g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.003e-31 Identity = 77/239 (32.22%), Postives = 134/239 (56.07%), Query Frame = -2 Query: 447 KELRAALRPLSD-RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRW-HEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQL--RHLVYMIENAI--LNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPK---NKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQ 1136 KE+++ L+D + +CTD C RYL ARN+ V KS+KML +TL+WR ++P++I+ +I G G VY N D+ GR ++ P ++ ++L ++LVY +E ++ P+ EQ +++D+ + S ++ +K+ + ++ L +H PER+ ++ +PP +F WKI+ FL+ T KV+F+ K K + + Y D ENL + GG YN +E+ K+ Sbjct: 53 KEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVY-VNKRDKKGRPIIFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEYLKE 289
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.291e-30 Identity = 75/215 (34.88%), Postives = 118/215 (54.88%), Query Frame = -2 Query: 438 TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ 1082 T C+ RYL A W+V +KK + +TL WR + + EI E TGK + D+DGR L L P +QNT + Q+RHLV+ +E AI +P E + LI+F S ++ + ++ +N+LQ HY ERL A++ N P F+K++ F+D T +K+KF P ++ Y ++ L ++FGG EY+HE++ Q+V+ Sbjct: 634 TRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEPLDR--------YVPKDQLDSNFGGSLHFEYHHEKYWPQLVE 839
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.199e-27 Identity = 75/242 (30.99%), Postives = 119/242 (49.17%), Query Frame = -2 Query: 438 LRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTY--------KPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSV-------PIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ 1118 L+PL + + T C RYL A W + + TL WR + ++I +AVE E+GK + + D R +L L+PG+QNT + Q++HLV+M+E I +P Q+ + LIDF + V PI ++ +++LQ HYPERL A+L N P + F K++ F+D T +K+ F P K Y + L + +GG +YNH+ + +V+ Sbjct: 74 LKPLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVK--------YVPKNELDSLYGGDLKFKYNHDVYWPALVE 306
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.701e-27 Identity = 95/281 (33.81%), Postives = 135/281 (48.04%), Query Frame = -2 Query: 381 QNDSLQHESKVKEL----RAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRS----TYKPEE---IRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDF-----TGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ--DDIKSATLWGFDNKLQSTG 1169 Q+D L+ + +L A RPLSD + + C RYL A WN + K L +TL WR T+ E+ + ++AVE ETGK F D R + ++ G+QNT S Q++ LVYM+E A P+ E++ L+DF G + PI AR +NV+Q+HYPERLA VL N P AF K++ FLD T K F P ++ + L + G +Y HE + MV+ DD++ L FD L+ G Sbjct: 58 QDDDLKLPENLNDLDNGTHANDRPLSDWEKFWLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------FENHIEPSQLDALYNGLLDFKYKHEVYWPDMVKKVDDLR---LKRFDRFLKFGG 326
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.852e-18 Identity = 71/245 (28.98%), Postives = 113/245 (46.12%), Query Frame = -2 Query: 483 SLQHESKVKELRAALRPLSD--RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1160 S ESK+ ELR L + D R Y T + R+L AR+W+V ++ ML ++L+WR ++ + + E + + + +H D+DGR V ILR G + L D LR +++ E I + E E++ L+D G S+ IK+ + I ++ +YPE + ++ PR+F W IV F+D T K F P + + Y DEE +P GG Sbjct: 218 SPMQESKLLELRKMLDGVDDLERVPSYQT---ILRFLAARDWHVSQAYAMLCDSLRWRREHRIDAL-LAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPC 458
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_DROPS (Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.338e-18 Identity = 73/247 (29.55%), Postives = 113/247 (45.75%), Query Frame = -2 Query: 483 SLQHESKVKELRAALRPLSD--RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1160 S ESK+ ELR L + D R Y T + R+L AR+W+V ++ ML ++L+WR ++ EE + VE G + HD+DGR + ILR G + L + LR +++ E I + E E++ L+D G S+ IK+ I ++ +YPE + ++ PR+F W IV F+D T K F P + + + Y DEE +P GG Sbjct: 216 SPMQESKLLELRKMLDGVDDLERVPSYQT---ILRFLSARDWHVSQAFAMLCDSLQWRKEHRMDSLLEEYTEPAVVVEHFPGGWHH---HDKDGRPIYILRLGHMDVKGLLKSLGMEGLLRLALHICEEGIQKINESAERLDKPVLNWSLLVDLEGLSMRHLWRPGIKALLYIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCEHMKDGLAQYIDEEIVPDFLGGPC 456
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.507e-17 Identity = 79/270 (29.26%), Postives = 122/270 (45.19%), Query Frame = -2 Query: 483 ARFLASVTMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSLDN------QLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1229 A FLAS N E +K+LR+ L + + D+ L R+L AR ++V +K+M E KWR Y I + E + K Y +H D+DGR V G N T ++ L++LV+ E+ + LP +L+ D G S+S++ + S R+ + QN+YPER+ L N P F +++ K FLD T K+ F+ + +S EL++ ENLP+ FGGK+ Sbjct: 5 AEFLASYPQKCPAGSLPGTPGNTDEAQEGALKQLRSELEAAGFK--ERLDDSTLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIMQDFHYDEKPL---VAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLVETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQS-ELLKQ-IPAENLPSKFGGKS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_ASHGO (SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.197e-17 Identity = 75/250 (30.00%), Postives = 120/250 (48.00%), Query Frame = -2 Query: 483 NDSLQHESKVKELRAALRPLSDRGL-KYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIEN-AILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1166 N + +HE+ ++ELR L+ G K D+ L R+L AR ++V ++ M E KWR E+ + E + K Y +H D+DGR V I G N T + + L++L++ E+ + LP Q L+ D G S+S + + S R+ N+ QN+YPER+ + N P F A +++ K FLD T K+ F+ + + EL++ ENLP FGG++ Sbjct: 26 NLTSEHEAALEELRKVLK---QAGFTKRLDDSTLLRFLRARKFDVAAARAMFENCEKWRKENGVDTIFEDFHYEEKPL---VAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERMLKNLIWEYESFSRYRLPASSRQADCLVETSCTILDLKGISISAAAQVLSYVREASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGQS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 6.249e-17 Identity = 73/245 (29.80%), Postives = 118/245 (48.16%), Query Frame = -2 Query: 483 QHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1154 + E+K+KE R L L + + D+ L R+L AR ++++ SK M E KWR + E+ + E + K Y +H D DGR V I G N T + + L++LV+ E + LP + +L+ D G S+S++ + S R+ N+ QN+YPER+ L N P F +++ K FLD T K+ F+ + + +L++ ENLP FGG++ Sbjct: 30 EQEAKLKEFRELLESLGYK--ERLDDSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPL---VAKYYPQYYHKTDNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRLPACSRKAGYLVETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-DLLKQ-IPAENLPKKFGGQS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16 Identity = 77/250 (30.80%), Postives = 121/250 (48.40%), Query Frame = -2 Query: 483 NDSLQHESKVKELRAAL--RPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIR---WHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNT------TSLDNQLRHLVYMIENAILN-LPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1166 N + + E K+ EL+ L + DR DA L R+L AR ++V +++M E KWR + I W++ + E K+Y +H D+DGR V + GK N T+ + LR+LV+ E+ + + LP E ++D G SLS++ + +D N+ QN+YPER+ L N P F + ++K FLD T K+ VY N + E + + NLP FGG++ Sbjct: 27 NLTAEQEQKLGELKMILLTKGYEDR----TDDATLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYK--EKKEVAKLYPQYYHKTDKDGRPVYVENVGKVNIHEMYKITTQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSCTILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDPVTVSKIH-VYGSNYK--EKLLAQVPAYNLPIKFGGQS 267
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2QLB5_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_009292 PE=4 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151 Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2 Query: 357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205 MF RWS+SH Q S L ESK+KEL+ + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A WG D KL + N + + Sbjct: 1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1M8D3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 3.387e-151 Identity = 206/284 (72.54%), Postives = 241/284 (84.86%), Query Frame = -2 Query: 357 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI 1205 MF RWS+SH Q S L ESK+KEL+ + PLS R L YCTDAC +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRA+FHDR GRTVLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYP NK+SV++M+SYFDEENLP + GGK+I+ YNHEEFS+ MVQDD+K A WG D KL + N + + Sbjct: 1 MFHRWSNSHQQDQGSSELYAESKIKELKGVIGPLSGRSLTYCTDACFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAMEGETGKLYRASFHDRQGRTVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPNNKDSVQVMKSYFDEENLPKELGGKSIMSYNHEEFSRLMVQDDLKCAAFWGSDGKLSNHIVNGNSASV 284
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3SNJ8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.853e-150 Identity = 209/295 (70.85%), Postives = 242/295 (82.03%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK+KEL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ TLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP KSAR+TI +LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+ PEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKGTLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPPKSARETIGILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: D7SPE3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01720 PE=4 SV=1) HSP 1 Score: 447.588 bits (1150), Expect = 7.585e-150 Identity = 213/295 (72.20%), Postives = 247/295 (83.73%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R SH++++NDSLQ +KV ELRAAL PLS R L+YCTDACL RYLEARNWNVDK+KKMLEETLKWR+TYKPEEIRWHE+A EGETGKV RA+FHDR GRTVLI+RPG QNTTS +N +RHLVY+IEN+ILNL E QEQM WLIDFTGWSL+T+VPIK+ARD IN+LQNHYPERLA+ +LYNPPRIF AFWK+VKYFLD KTFQKVKFVYPKNKES+E+M+S FD ENLP +FGGKA L+Y+HEEFS+ M +DD+K+A+ WG D+K SG E P LAP AS Sbjct: 1 MFRR-RQSHNHEENDSLQRGAKVSELRAALGPLSGRSLQYCTDACLVRYLEARNWNVDKAKKMLEETLKWRATYKPEEIRWHEVAHEGETGKVSRADFHDRLGRTVLIMRPGMQNTTSAENNIRHLVYLIENSILNLREGQEQMSWLIDFTGWSLNTNVPIKTARDIINILQNHYPERLAICILYNPPRIFVAFWKVVKYFLDPKTFQKVKFVYPKNKESLEVMKSLFDVENLPGEFGGKATLKYDHEEFSRMMAEDDVKTASYWGLDSKPCHVTNGYSGAETMP----LAPPAS 290
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: R0GE21_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021373mg PE=4 SV=1) HSP 1 Score: 447.203 bits (1149), Expect = 1.326e-149 Identity = 216/298 (72.48%), Postives = 251/298 (84.23%), Query Frame = -2 Query: 330 MFSRWSHSHHNQQ--NDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGF----DNKLQSTGTNQSGPEITPEPICLAP 1205 MF RW +S +Q N+S E+K+KEL+A L LS R YC+DACL+RYLEARNWNV K+KKMLEETLKWRST+KPEEIRW E++ EGETGKVY+A FHDR GRTVLILRPG QNT SLD Q++HLVY+IENAILNLPEDQEQM WLIDFT WS+STSVPIKSAR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYF+DAKTF KVKFVYPKN ESVELM S+FDEENLPT+FGGKA+L+YN+EEFSKQM Q+D+K+A WG +N+LQ++ SG EI+PEPI P Sbjct: 1 MF-RWKNSSQTEQEHNESALREAKIKELKALLGQLSGRSSLYCSDACLKRYLEARNWNVVKAKKMLEETLKWRSTFKPEEIRWDEVSGEGETGKVYKAGFHDRHGRTVLILRPGLQNTKSLDKQMKHLVYLIENAILNLPEDQEQMSWLIDFTNWSMSTSVPIKSARETINILQNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFVYPKNPESVELMSSFFDEENLPTEFGGKALLQYNYEEFSKQMNQEDVKTANFWGLIHRNNNQLQAS-NGFSGAEISPEPIQTNP 296 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |