g.barbadense_cottongen_reftransV1_0092016, g.barbadense_cottongen_reftransV1_0092016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.003e-31 Identity = 77/239 (32.22%), Postives = 134/239 (56.07%), Query Frame = -2 Query: 447 KELRAALRPLSD-RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRW-HEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQL--RHLVYMIENAI--LNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPK---NKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQ 1136 KE+++ L+D + +CTD C RYL ARN+ V KS+KML +TL+WR ++P++I+ +I G G VY N D+ GR ++ P ++ ++L ++LVY +E ++ P+ EQ +++D+ + S ++ +K+ + ++ L +H PER+ ++ +PP +F WKI+ FL+ T KV+F+ K K + + Y D ENL + GG YN +E+ K+ Sbjct: 53 KEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVY-VNKRDKKGRPIIFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAELLEYVDIENLEQNLGGNLDYNYNIDEYLKE 289
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.291e-30 Identity = 75/215 (34.88%), Postives = 118/215 (54.88%), Query Frame = -2 Query: 438 TDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ 1082 T C+ RYL A W+V +KK + +TL WR + + EI E TGK + D+DGR L L P +QNT + Q+RHLV+ +E AI +P E + LI+F S ++ + ++ +N+LQ HY ERL A++ N P F+K++ F+D T +K+KF P ++ Y ++ L ++FGG EY+HE++ Q+V+ Sbjct: 634 TRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEPLDR--------YVPKDQLDSNFGGSLHFEYHHEKYWPQLVE 839
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.199e-27 Identity = 75/242 (30.99%), Postives = 119/242 (49.17%), Query Frame = -2 Query: 438 LRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTY--------KPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSV-------PIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ 1118 L+PL + + T C RYL A W + + TL WR + ++I +AVE E+GK + + D R +L L+PG+QNT + Q++HLV+M+E I +P Q+ + LIDF + V PI ++ +++LQ HYPERL A+L N P + F K++ F+D T +K+ F P K Y + L + +GG +YNH+ + +V+ Sbjct: 74 LKPLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEPFVK--------YVPKNELDSLYGGDLKFKYNHDVYWPALVE 306
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.701e-27 Identity = 95/281 (33.81%), Postives = 135/281 (48.04%), Query Frame = -2 Query: 381 QNDSLQHESKVKEL----RAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRS----TYKPEE---IRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDF-----TGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQ--DDIKSATLWGFDNKLQSTG 1169 Q+D L+ + +L A RPLSD + + C RYL A WN + K L +TL WR T+ E+ + ++AVE ETGK F D R + ++ G+QNT S Q++ LVYM+E A P+ E++ L+DF G + PI AR +NV+Q+HYPERLA VL N P AF K++ FLD T K F P ++ + L + G +Y HE + MV+ DD++ L FD L+ G Sbjct: 58 QDDDLKLPENLNDLDNGTHANDRPLSDWEKFWLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------FENHIEPSQLDALYNGLLDFKYKHEVYWPDMVKKVDDLR---LKRFDRFLKFGG 326
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_DROME (Protein real-time OS=Drosophila melanogaster GN=retm PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.852e-18 Identity = 71/245 (28.98%), Postives = 113/245 (46.12%), Query Frame = -2 Query: 483 SLQHESKVKELRAALRPLSD--RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1160 S ESK+ ELR L + D R Y T + R+L AR+W+V ++ ML ++L+WR ++ + + E + + + +H D+DGR V ILR G + L D LR +++ E I + E E++ L+D G S+ IK+ + I ++ +YPE + ++ PR+F W IV F+D T K F P + + Y DEE +P GG Sbjct: 218 SPMQESKLLELRKMLDGVDDLERVPSYQT---ILRFLAARDWHVSQAYAMLCDSLRWRREHRIDAL-LAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHMDVKGLLKSLGMDGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVPDFLGGPC 458
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: RETM_DROPS (Protein real-time OS=Drosophila pseudoobscura pseudoobscura GN=retm PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.338e-18 Identity = 73/247 (29.55%), Postives = 113/247 (45.75%), Query Frame = -2 Query: 483 SLQHESKVKELRAALRPLSD--RGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAILNLPEDQEQM-------VWLIDFTGWSLST--SVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1160 S ESK+ ELR L + D R Y T + R+L AR+W+V ++ ML ++L+WR ++ EE + VE G + HD+DGR + ILR G + L + LR +++ E I + E E++ L+D G S+ IK+ I ++ +YPE + ++ PR+F W IV F+D T K F P + + + Y DEE +P GG Sbjct: 216 SPMQESKLLELRKMLDGVDDLERVPSYQT---ILRFLSARDWHVSQAFAMLCDSLQWRKEHRMDSLLEEYTEPAVVVEHFPGGWHH---HDKDGRPIYILRLGHMDVKGLLKSLGMEGLLRLALHICEEGIQKINESAERLDKPVLNWSLLVDLEGLSMRHLWRPGIKALLYIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCEHMKDGLAQYIDEEIVPDFLGGPC 456
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.507e-17 Identity = 79/270 (29.26%), Postives = 122/270 (45.19%), Query Frame = -2 Query: 483 ARFLASVTMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEI----RWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSLDN------QLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1229 A FLAS N E +K+LR+ L + + D+ L R+L AR ++V +K+M E KWR Y I + E + K Y +H D+DGR V G N T ++ L++LV+ E+ + LP +L+ D G S+S++ + S R+ + QN+YPER+ L N P F +++ K FLD T K+ F+ + +S EL++ ENLP+ FGGK+ Sbjct: 5 AEFLASYPQKCPAGSLPGTPGNTDEAQEGALKQLRSELEAAGFK--ERLDDSTLLRFLRARKFDVALAKEMFENCEKWRKEYGTNTIMQDFHYDEKPL---VAKYYPQYYHKTDKDGRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLVETSCTVMDLKGISISSAYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQS-ELLKQ-IPAENLPSKFGGKS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_ASHGO (SEC14 cytosolic factor OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC14 PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 2.197e-17 Identity = 75/250 (30.00%), Postives = 120/250 (48.00%), Query Frame = -2 Query: 483 NDSLQHESKVKELRAALRPLSDRGL-KYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIEN-AILNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1166 N + +HE+ ++ELR L+ G K D+ L R+L AR ++V ++ M E KWR E+ + E + K Y +H D+DGR V I G N T + + L++L++ E+ + LP Q L+ D G S+S + + S R+ N+ QN+YPER+ + N P F A +++ K FLD T K+ F+ + + EL++ ENLP FGG++ Sbjct: 26 NLTSEHEAALEELRKVLK---QAGFTKRLDDSTLLRFLRARKFDVAAARAMFENCEKWRKENGVDTIFEDFHYEEKPL---VAKFYPQYYHKTDKDGRPVYIEELGAVNLTEMYKITTQERMLKNLIWEYESFSRYRLPASSRQADCLVETSCTILDLKGISISAAAQVLSYVREASNIGQNYYPERMGKFYMINAPFGFSAAFRLFKPFLDPVTVSKI-FILGSSYQK-ELLKQ-IPAENLPVKFGGQS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 6.249e-17 Identity = 73/245 (29.80%), Postives = 118/245 (48.16%), Query Frame = -2 Query: 483 QHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKP----EEIRWHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNTTSL------DNQLRHLVYMIENAI-LNLPEDQEQMVWLI-------DFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1154 + E+K+KE R L L + + D+ L R+L AR ++++ SK M E KWR + E+ + E + K Y +H D DGR V I G N T + + L++LV+ E + LP + +L+ D G S+S++ + S R+ N+ QN+YPER+ L N P F +++ K FLD T K+ F+ + + +L++ ENLP FGG++ Sbjct: 30 EQEAKLKEFRELLESLGYK--ERLDDSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIFEDFHYEEKPL---VAKYYPQYYHKTDNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRLPACSRKAGYLVETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-DLLKQ-IPAENLPKKFGGQS 266
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16 Identity = 77/250 (30.80%), Postives = 121/250 (48.40%), Query Frame = -2 Query: 483 NDSLQHESKVKELRAAL--RPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIR---WHEIAVEGETGKVYRANFH--DRDGRTVLILRPGKQNT------TSLDNQLRHLVYMIENAILN-LPEDQ-------EQMVWLIDFTGWSLSTSVPIKS-ARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKA 1166 N + + E K+ EL+ L + DR DA L R+L AR ++V +++M E KWR + I W++ + E K+Y +H D+DGR V + GK N T+ + LR+LV+ E+ + + LP E ++D G SLS++ + +D N+ QN+YPER+ L N P F + ++K FLD T K+ VY N + E + + NLP FGG++ Sbjct: 27 NLTAEQEQKLGELKMILLTKGYEDR----TDDATLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILEDFWYK--EKKEVAKLYPQYYHKTDKDGRPVYVENVGKVNIHEMYKITTQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSCTILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDPVTVSKIH-VYGSNYK--EKLLAQVPAYNLPIKFGGQS 267
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A068UGW9_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_26 OS=Coffea canephora GN=GSCOC_T00024802001 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 1.564e-162 Identity = 223/295 (75.59%), Postives = 259/295 (87.80%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF RW++SHH + DS + + KV EL+AAL PLS RGL+YC+DACL+RYLEAR+WNVDK+KKMLEETL+WRSTYKPEEIRWHE+AVEGETGKV+RANFHDR GRTVLILRPGKQNTTS+DNQ+RHLVY+IENAILNLPE QEQM WLIDFTGWS++ +VPIKSA+DT+NVLQNHYPERLA+A LY+PPRIFEAFWKIVK+FLD KTFQKVKFVYPKNK+SVELMRSYFD +NLPT+FGGKA L+Y+HEEFS+QM QDD+K+A +WGFD +G E+ PEP LA AS Sbjct: 1 MFRRWNNSHH--EKDSDEQQEKVTELKAALGPLSGRGLQYCSDACLKRYLEARSWNVDKAKKMLEETLRWRSTYKPEEIRWHEVAVEGETGKVFRANFHDRHGRTVLILRPGKQNTTSIDNQIRHLVYLIENAILNLPEGQEQMAWLIDFTGWSITNNVPIKSAKDTVNVLQNHYPERLAVAFLYSPPRIFEAFWKIVKFFLDPKTFQKVKFVYPKNKDSVELMRSYFDVDNLPTEFGGKATLQYDHEEFSRQMAQDDVKAAKVWGFDKHPNGF----TGAEVAPEPETLASPAS 289
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9R7T6_RICCO (Transporter, putative OS=Ricinus communis GN=RCOM_1594180 PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 2.232e-162 Identity = 218/294 (74.15%), Postives = 256/294 (87.07%), Query Frame = -2 Query: 324 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAA 1205 MF RWS+SH +Q+++SL+ +SK+ ELR + PLS R L+YCTDACLRRYLEAR+WNVDKSKKMLEETLKWRS YKPEEIRW+E+A+E ETGK+YRANF DR GRTVLILRPG QNT S++NQLRHLVY+IENAI+NLPE QE+M WLIDFTGWS+S SVPIK+AR+TIN+LQNHYPERLA+A LYNPPRIFEAFWKIVKYF+DAKTFQKVKFVYPKN ESVELMRSYFD+ NLPTDFGGKA+L+Y+H+EFS M QDD+K+A+ WG ++K Q+ G E+ PEPI L P A Sbjct: 1 MFHRWSNSHKDQEDESLKQKSKINELRNVIGPLSGRSLQYCTDACLRRYLEARSWNVDKSKKMLEETLKWRSAYKPEEIRWNEVAIESETGKLYRANFRDRQGRTVLILRPGMQNTKSIENQLRHLVYIIENAIINLPEGQEEMAWLIDFTGWSISNSVPIKTARETINILQNHYPERLAIAFLYNPPRIFEAFWKIVKYFIDAKTFQKVKFVYPKNLESVELMRSYFDDVNLPTDFGGKAMLKYDHQEFSSLMAQDDVKTASFWGLNDKHQAATNGHHGAEVVPEPIGLVPPA 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: B9GRY8_POPTR (SEC14 cytosolic factor family protein OS=Populus trichocarpa GN=POPTR_0002s26250g PE=4 SV=2) HSP 1 Score: 468.389 bits (1204), Expect = 4.917e-158 Identity = 212/288 (73.61%), Postives = 250/288 (86.81%), Query Frame = -2 Query: 342 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPI 1205 MF +++ H+Q+NDSLQHESK+ EL+A + PLS L+YCTDAC RRYL+ARNWNVDK+KKMLEET+KWRSTYKPEEI WHE+AVEGETGK+YRANFHDR GRTVLILRPG QNT S+DNQ+RHL Y+IENA+LNLPE QEQM WLIDFTG S++ + PIKSARDT+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPK+ +SVELMRSYFD+ENLPT+FGG+AIL+Y+HEEFS+ M++DD K+A+ WGFD KLQ G + P P+ Sbjct: 1 MFLWRNNTSHDQENDSLQHESKINELKATIGPLSGHSLQYCTDACFRRYLDARNWNVDKAKKMLEETIKWRSTYKPEEICWHEVAVEGETGKIYRANFHDRQGRTVLILRPGMQNTKSIDNQMRHLTYLIENAVLNLPEGQEQMAWLIDFTGLSINNTPPIKSARDTVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKDNDSVELMRSYFDDENLPTEFGGRAILKYDHEEFSRLMIEDDAKAASFWGFDKKLQQAVNGHLGADGAPSPV 288
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A022QXY8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011028mg PE=4 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 4.026e-154 Identity = 216/297 (72.73%), Postives = 252/297 (84.85%), Query Frame = -2 Query: 321 VTMFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1211 + F + + S H+ ++ LQ E K EL+A+L PLS R L++CTDACL+RYLEAR+WNVDKSKKMLEETL+WR+++KPEEIRWHEIA EGETGKV+RANF DR GR+VLILRPG QNTTSLDN ++HLVY+IENAILNL + QEQM WLIDFTG SLST+V IKSA+DT+N+LQNHYPERL +A LY+PPRIFEAFWK+VKYFLD KTFQKVKFVYPKNKESVELMRSYFD +NLPT+FGGKA LEY+H EFS+QM DD+KSA LWGFD K QS G G E+ PEP CLAP+AS Sbjct: 1 MMFFRKSTTSPHDGESLELQQERKFNELKASLGPLSGRNLQFCTDACLKRYLEARSWNVDKSKKMLEETLRWRTSFKPEEIRWHEIADEGETGKVFRANFRDRQGRSVLILRPGMQNTTSLDNNIKHLVYLIENAILNLQDGQEQMAWLIDFTGLSLSTNVSIKSAKDTVNILQNHYPERLGIAFLYSPPRIFEAFWKVVKYFLDPKTFQKVKFVYPKNKESVELMRSYFDVDNLPTEFGGKATLEYDHVEFSRQMALDDVKSAKLWGFDKK-QSNGF--GGAEVAPEPECLAPSAS 294
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: W9R1R7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003333 PE=4 SV=1) HSP 1 Score: 458.759 bits (1179), Expect = 4.898e-154 Identity = 217/295 (73.56%), Postives = 249/295 (84.41%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R S+ H Q+NDS Q + + ELRAA+ PL+ R +YCTDAC RRYLEARNWN++KS+KMLE++LKWRST+KPEEIRW ++A+EGETGKVYRANFHDR GR+VLILRP +QNT SLDNQ+RHLVY+IENAILNLPE QEQM WLIDFTGW+LSTSVPIKSAR+T+N+LQNHYPERLA+A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMR YFDEENLPTDFGGKA+L Y++EEFS+QM DD K+A LWG + KL SG PEP LAP AS Sbjct: 4 MFRRRSNFHQEQENDSSQQQITINELRAAIGPLTGRSSQYCTDACFRRYLEARNWNIEKSRKMLEDSLKWRSTFKPEEIRWDQVAIEGETGKVYRANFHDRHGRSVLILRPARQNTASLDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWTLSTSVPIKSARETVNILQNHYPERLAVAFLYNPPRIFEAFWKIVKYFLDTKTFHKVKFVYPKNKDSVELMRQYFDEENLPTDFGGKAVLAYDYEEFSRQMALDDAKAAALWGSNEKLNHPTNGYSGAVAAPEPPSLAPPAS 298
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I1MXV6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153 Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2 Query: 339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205 MF RWS+SH Q S L ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A WG D KL + N P + TP C Sbjct: 1 MFHRWSNSHQQDQGSSELCTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A0B2PU80_GLYSO (Random slug protein 5 OS=Glycine soja GN=glysoja_008678 PE=4 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.030e-153 Identity = 212/293 (72.35%), Postives = 245/293 (83.62%), Query Frame = -2 Query: 339 MFSRWSHSHHNQQNDS-LQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEI---TPEPIC 1205 MF RWS+SH Q S L ESK+KEL+ A+ PLS R L YCTD+C +RYLEARNWNVDKSKKMLEETL+WRSTYKPEEIRWHE+A+EGETGK+YRANFHDR GR VLILRPG QNTTS++NQLRHLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+K AR+TIN+LQNHYPERLA+A LYNPPR+FEAFWKIVKYFLD KTFQKVKFVYPKNK+SVELM+SYFDEENLP + GGK+I+ YNH+EFS+ MVQDD+K A WG D KL + N P + TP C Sbjct: 1 MFHRWSNSHQQDQGSSELYTESKIKELKGAIGPLSGRSLMYCTDSCFKRYLEARNWNVDKSKKMLEETLRWRSTYKPEEIRWHEVAIEGETGKLYRANFHDRQGRNVLILRPGMQNTTSMENQLRHLVYLLENAMLNLPPGQEQMSWLIDFTGWSITNNVPLKLARETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMKSYFDEENLPKELGGKSIMSYNHDEFSRLMVQDDLKCAAFWGSDGKLSNHIANGQSPAVCNETPPEAC 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A072VE77_MEDTR (Sec14p-like phosphatidylinositol transfer family protein OS=Medicago truncatula GN=MTR_1g022185 PE=4 SV=1) HSP 1 Score: 454.136 bits (1167), Expect = 2.489e-152 Identity = 210/295 (71.19%), Postives = 245/295 (83.05%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK+KEL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+ PEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIKELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVAPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: I3T0C2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 453.751 bits (1166), Expect = 2.714e-152 Identity = 210/295 (71.19%), Postives = 246/295 (83.39%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF+ W S +QQN ESK++EL+ A+ PLS LKYCTDACL+RYLEARNWNVDKSKKML+ETLKWRS YKPEEIRW E+AVEGETGK+YRA FHDR GRTVLILRPG QNT+S+DNQ++HLVY++ENA+LNLP QEQM WLIDFTGWS++ +VP+KSAR+TI++LQNHYPERL +A LYNPPRIFEAFWKIVKYFLD KTF KVKFVYPKNK+SVELMRSYFD+ENLP++ GGK+IL YNHEEFSK M QDD+K A WG D KL++ E+TPEP+C A+ Sbjct: 1 MFNLWGGSQQDQQNKEAYAESKIEELKLAIGPLSGHDLKYCTDACLKRYLEARNWNVDKSKKMLKETLKWRSVYKPEEIRWDEVAVEGETGKMYRAGFHDRQGRTVLILRPGMQNTSSIDNQIKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSITNNVPLKSARETISILQNHYPERLGIAFLYNPPRIFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMRSYFDDENLPSELGGKSILNYNHEEFSKIMAQDDLKCADYWGTDEKLRN--HRHCAAEVTPEPVCSETPAT 293
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Match: A0A067KR40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05319 PE=4 SV=1) HSP 1 Score: 452.981 bits (1164), Expect = 5.826e-152 Identity = 206/295 (69.83%), Postives = 244/295 (82.71%), Query Frame = -2 Query: 321 MFSRWSHSHHNQQNDSLQHESKVKELRAALRPLSDRGLKYCTDACLRRYLEARNWNVDKSKKMLEETLKWRSTYKPEEIRWHEIAVEGETGKVYRANFHDRDGRTVLILRPGKQNTTSLDNQLRHLVYMIENAILNLPEDQEQMVWLIDFTGWSLSTSVPIKSARDTINVLQNHYPERLAMAVLYNPPRIFEAFWKIVKYFLDAKTFQKVKFVYPKNKESVELMRSYFDEENLPTDFGGKAILEYNHEEFSKQMVQDDIKSATLWGFDNKLQSTGTNQSGPEITPEPICLAPAAS 1205 MF R S ++Q+ND+ QH++KV EL+AAL PLS R L YCTDAC+RRYLEARNWNVDK+ KMLEETLKWR+TYKPEEIRWHEI+ EGETGKV+RANFHDR GRTVLI+RPGKQNTT ++ +RHLVY+IEN+ILNL E QEQM WLIDFTG SLS SV +++AR+ IN+LQNHYPERLA+A LYNPPRIFEAFWK++KYFLD KTFQKVKFVYPKNK+SVE MRS FD +NLP++FGGKA + Y+H EFS+ M +DD+K+A WGFD K G ++ PEP LAP AS Sbjct: 1 MFMRRKQSQNHQENDASQHDAKVSELKAALGPLSGRSLTYCTDACMRRYLEARNWNVDKAHKMLEETLKWRATYKPEEIRWHEISHEGETGKVFRANFHDRHGRTVLIMRPGKQNTTCAEDNIRHLVYLIENSILNLSEGQEQMSWLIDFTGLSLSNSVSVRTAREIINILQNHYPERLAIAFLYNPPRIFEAFWKVIKYFLDPKTFQKVKFVYPKNKDSVEFMRSLFDIDNLPSEFGGKATMNYDHHEFSRMMAEDDVKTAKYWGFDQKQSQIACGHLGAQVAPEPTPLAPPAS 295 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0092016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092016 ID=g.barbadense_cottongen_reftransV1_0092016; Name=g.barbadense_cottongen_reftransV1_0092016; organism=Gossypium barbadense; type=contig; length=1941bpback to top |