g.arboreum_cottongen_reftransV1_0001582, g.arboreum_cottongen_reftransV1_0001582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A0B0NNH3_GOSAR (Poly [ADP-ribose] polymerase 2-like protein OS=Gossypium arboreum GN=F383_01807 PE=4 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 1.485e-138 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK Sbjct: 477 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 672
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A0D2SIY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127600 PE=4 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 7.109e-137 Identity = 191/196 (97.45%), Postives = 194/196 (98.98%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 YIQNTHAQTHSNYTVDVVQIF VTRDGESERF+KFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ R+GALLYNEY+VYNVDQIRMRYLIQVSFKYTK Sbjct: 269 YIQNTHAQTHSNYTVDVVQIFAVTRDGESERFEKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQKRKGALLYNEYVVYNVDQIRMRYLIQVSFKYTK 464
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A0D2TE00_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127600 PE=4 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.892e-135 Identity = 191/196 (97.45%), Postives = 194/196 (98.98%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 YIQNTHAQTHSNYTVDVVQIF VTRDGESERF+KFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ R+GALLYNEY+VYNVDQIRMRYLIQVSFKYTK Sbjct: 452 YIQNTHAQTHSNYTVDVVQIFAVTRDGESERFEKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQKRKGALLYNEYVVYNVDQIRMRYLIQVSFKYTK 647
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A0D2SCA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G127600 PE=4 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 8.951e-135 Identity = 191/196 (97.45%), Postives = 194/196 (98.98%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 YIQNTHAQTHSNYTVDVVQIF VTRDGESERF+KFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ R+GALLYNEY+VYNVDQIRMRYLIQVSFKYTK Sbjct: 502 YIQNTHAQTHSNYTVDVVQIFAVTRDGESERFEKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQKRKGALLYNEYVVYNVDQIRMRYLIQVSFKYTK 697
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A061DRS0_THECC (Poly(ADP-ribose) polymerase isoform 1 OS=Theobroma cacao GN=TCM_004671 PE=4 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 7.079e-125 Identity = 177/196 (90.31%), Postives = 187/196 (95.41%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y +NTHA+THS YTVD+VQIFKV R+GE E FKKFS TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCYT+S+FTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQ+LDDGV+VPLGKPKEQ REGAL YNEYIVYNVDQIRMRYL+QV+FKYTK Sbjct: 448 YSRNTHAKTHSQYTVDIVQIFKVAREGEIECFKKFSATKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYTSSSFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQTLDDGVIVPLGKPKEQKREGALWYNEYIVYNVDQIRMRYLVQVNFKYTK 643
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A059AYD3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01106 PE=4 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 4.096e-114 Identity = 164/197 (83.25%), Postives = 182/197 (92.39%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTHA+THS+YTVD+VQIF+V+R+GE+ERF KFS T NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCY NSA GVLLLCEVALGDMAELL AK DADKLP GKLSTKGVGAT+PDPSEAQ+L++GVVVPLG+PKEQ+ R+GALLYNEYIVYNVDQIRMRY++QV+F K Sbjct: 443 YMHNTHAKTHSSYTVDIVQIFRVSREGETERFSKFSTTSNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYANSAAAAGVLLLCEVALGDMAELLHAKYDADKLPAGKLSTKGVGATSPDPSEAQALEEGVVVPLGRPKEQSERKGALLYNEYIVYNVDQIRMRYVVQVNFNIGK 639
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: D7U2A8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00630 PE=4 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 2.145e-110 Identity = 156/197 (79.19%), Postives = 180/197 (91.37%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTHA+THSNYTVD+VQIF+V+R+GE ERF+KFS TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANY Y + A TTGVL+LCEVALGDMAELL A +ADKLP+GKLSTKG+GATAPDPSEAQ+ ++G+VVPLGKPK + +G LLYNEYIVYNVDQIRMRY++QV+F + + Sbjct: 352 YMENTHAETHSNYTVDIVQIFRVSREGEVERFRKFSSTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYSYPSCAMTTGVLVLCEVALGDMAELLTANCNADKLPEGKLSTKGIGATAPDPSEAQAFENGIVVPLGKPKLRSDPKGGLLYNEYIVYNVDQIRMRYVVQVTFNFKR 548
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: V4U0Q6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019312mg PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 2.832e-110 Identity = 158/195 (81.03%), Postives = 179/195 (91.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y+ NTHA+THS Y+VD+VQIF+V R+GE+ERF+KFS +KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCY + + T GVLLLCEVALGDM+ELL A DADKLPDGKLSTKGVG TAPDP EA++L+DGV+VPLGKPKEQ N +G LLYNEYIVY+VDQIRMRY++QV+FKY Sbjct: 431 YLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKY 625
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A067HGZ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006883mg PE=4 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 3.291e-110 Identity = 158/195 (81.03%), Postives = 179/195 (91.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y+ NTHA+THS Y+VD+VQIF+V R+GE+ERF+KFS +KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCY + + T GVLLLCEVALGDM+ELL A DADKLPDGKLSTKGVG TAPDP EA++L+DGV+VPLGKPKEQ N +G LLYNEYIVY+VDQIRMRY++QV+FKY Sbjct: 431 YLLNTHAKTHSAYSVDIVQIFRVEREGETERFRKFSNSKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASPSATAGVLLLCEVALGDMSELLYANYDADKLPDGKLSTKGVGQTAPDPLEAETLEDGVIVPLGKPKEQLNSKGHLLYNEYIVYSVDQIRMRYVVQVNFKY 625
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A0A0KAX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397590 PE=4 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 2.071e-108 Identity = 159/195 (81.54%), Postives = 175/195 (89.74%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNR-EGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y QNTHA+THS+YTVD+V+IF+V+R GE ERFKKFS TKNR LLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCY + A TTGVLLLCEVALGDM ELL A +ADKLP+GKLSTKGVG T P+ SEA +LDDGVVVPLGKPK+ R +GALLYNEYIVYNVDQIRMRYL+QV+F + Sbjct: 466 YTQNTHAKTHSDYTVDIVRIFRVSRKGEDERFKKFSNTKNRKLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYASRAATTGVLLLCEVALGDMVELLDADYNADKLPEGKLSTKGVGQTEPNHSEAMTLDDGVVVPLGKPKQSQRGKGALLYNEYIVYNVDQIRMRYLLQVNFHF 660
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_ARATH (Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.353e-100 Identity = 144/195 (73.85%), Postives = 169/195 (86.67%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THS YTV++ Q+F+ +R E++RF++FS +KNRMLLWHGSRLTNW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY N+ GVLLLCEVALGDM ELL + +AD LP GKLSTKGVG TAP+PSEAQ+L+DGVVVPLGKP E++ +G LLYNEYIVYNV+QI+MRY+IQV F Y Sbjct: 441 YMENTHAKTHSGYTVEIAQLFRASRAVEADRFQQFSSSKNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGDMNELLYSDYNADNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNVEQIKMRYVIQVKFNY 635
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_MAIZE (Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 3.079e-100 Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKL +KGVG TAP+ E++ DDGVVVPLG+PK++ ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 456 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLRSKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 652
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PRP2A_ORYSJ (Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica GN=PARP2-A PE=3 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 9.900e-100 Identity = 145/197 (73.60%), Postives = 167/197 (84.77%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTH +TH++YTVDVVQIFKV+R GE ERF+KF+ NRMLLWHGSRLTNW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALG+M ELL A DA+ LP GKLSTKGVG T P+ +E++ DDGVVVPLGKPK E ++ G+LLYNE+IVYNVDQIRMRY++ VSF + K Sbjct: 463 YLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGEMNELLNADYDANNLPKGKLSTKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYNVDQIRMRYVLHVSFNFKK 659
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PRP2B_ORYSJ (Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica GN=PARP2-B PE=3 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 1.669e-93 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTH +TH+ YTVD+VQIFKV+R GE ERF+KF+ NRMLLWHGSRLTNW GILSQGLRIAPPEAP +G+MFGKGVYFADMFSKSANYC + A +GV+LLCEVALG+M ELL AD LP+GKLSTKGVG T P+ +E++ DDG+V+PLGKP K +R G+L+YNEYIVYNVDQIRMRY++ V+F + + Sbjct: 407 YLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSANYCCASEACKSGVMLLCEVALGEMNELLYGDFGADNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSRRGSLMYNEYIVYNVDQIRMRYILNVNFNFKR 603
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_RAT (Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1 SV=4) HSP 1 Score: 238.039 bits (606), Expect = 3.144e-70 Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G TAPDPS + +L DGV VPLG P N + LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 817 YVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTAPDPSASITL-DGVEVPLGTGIPSGVN-DTCLLYNEYIVYDIAQVNLKYLLKLKFNF 1009
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_XENLA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis GN=parp1 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.737e-70 Identity = 116/195 (59.49%), Postives = 145/195 (74.36%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V++IFK+ R+GE +R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ G++LL EVALG+M E L+A S KLP GK S KG+G TAPDPS L DGV VPLGK N + +LLYNEYIVY++ Q+ ++YL+++ F Y Sbjct: 800 YVKNTHADTHNAYDLEVLEIFKIDREGEYQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHAMPGSPIGLILLGEVALGNMHE-LKAASQITKLPKGKHSVKGLGRTAPDPSATVQL-DGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNY 992
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.585e-70 Identity = 112/195 (57.44%), Postives = 146/195 (74.87%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+TH Y ++VV IFKV R GE+ R+K F NR LLWHGSRLTN+ GILS GL+IAPPEAP TGYMFGKG+YFADM SKSANYC T+ +TG++LL EVALGDM E AK KLP+ K S G G T P+PSE+ +DGV +PLGKP + + +LLYNE+I+Y++ Q+ ++Y+++++FKY Sbjct: 802 YVKNTHAETHKLYDLEVVDIFKVARQGEARRYKPFKKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTAAKY-VTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKY 995
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_MOUSE (Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.872e-69 Identity = 115/196 (58.67%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G+++L EVALG+M EL A S KLP GK S KG+G T PDPS + +L +GV VPLG P N + ALLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 816 YVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVN-DTALLYNEYIVYDIAQVNLKYLLKLKFNF 1008
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_HUMAN (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4) HSP 1 Score: 233.802 bits (595), Expect = 9.936e-69 Identity = 114/195 (58.46%), Postives = 143/195 (73.33%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GE +R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G T PDPS SL DGV VPLG + +LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 817 YVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSANISL-DGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNF 1009
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_CRIGR (Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2 SV=3) HSP 1 Score: 233.802 bits (595), Expect = 1.019e-68 Identity = 115/196 (58.67%), Postives = 146/196 (74.49%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G T PDPS + +L +GV VPLG P N + LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 816 YVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVN-DTCLLYNEYIVYDIAQVNLKYLLKLKFNF 1008 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001582 ID=g.arboreum_cottongen_reftransV1_0001582; Name=g.arboreum_cottongen_reftransV1_0001582; organism=Gossypium arboreum; type=contig; length=786bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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