g.arboreum_cottongen_reftransV1_0001582, g.arboreum_cottongen_reftransV1_0001582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A068V8L3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_144 OS=Coffea canephora GN=GSCOC_T00005043001 PE=4 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.182e-104 Identity = 147/196 (75.00%), Postives = 175/196 (89.29%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTHA+THS+Y+VD+VQIF+ +R+GESERFKKFS T NR+LLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY++S GVLLLCEVALGDMAELL A +ADKLP GKLSTKG+GATAPD SE+++L+DGV+VP G+PK+ + +LLYNEYIVYNV+QI+MRY++QV F Y + Sbjct: 435 YMKNTHAKTHSSYSVDIVQIFRASREGESERFKKFSRTHNRLLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYSSSNAHAGVLLLCEVALGDMAELLHADYNADKLPQGKLSTKGIGATAPDSSESRTLEDGVIVPSGRPKQLGTKASLLYNEYIVYNVEQIKMRYVLQVKFNYRR 630
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7LGW7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 1.195e-104 Identity = 149/195 (76.41%), Postives = 176/195 (90.26%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THSNYTVD+VQIF+ +R+GE+ERF+KF+ TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY GVLLLCEVALG+MAELL AK DAD+LP+GKLSTKG+G TAPDPS+A+ L+DG+VVPLGKPK ++ ++G LLYNEYIVYNV+QIRMRY++ V+F + Sbjct: 472 YMKNTHAETHSNYTVDIVQIFRTSREGEAERFRKFASTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYATRTAKDGVLLLCEVALGEMAELLTAKYDADQLPNGKLSTKGLGGTAPDPSKARELEDGLVVPLGKPKTKSGKKGHLLYNEYIVYNVEQIRMRYIVHVNFNF 666
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7VS39_MAIZE (Uncharacterized protein OS=Zea mays GN=ZEAMMB73_284458 PE=4 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 8.873e-104 Identity = 145/197 (73.60%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKLSTKGVG TAP+ E++ DDGVVVPLG+PK E ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 70 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 266
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: B4FCJ3_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 2.673e-103 Identity = 144/197 (73.10%), Postives = 170/197 (86.29%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKLSTKGVG TAP+ E++ DDGVVVPLG+PK++ ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 137 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 333
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: M1CY69_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030070 PE=4 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 2.465e-102 Identity = 149/195 (76.41%), Postives = 170/195 (87.18%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNR-EGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THS+Y VD+VQ+F+ +R+GE+ERF+KFS NRMLLWHGSRLTNW GILSQGLRIAPPEAP+TGYMFGKGVYFADMFS+SA YCY +SA GVLLLCEVALGDM ELL A SDADKLP GKLSTK VGATAPD EAQ L+DGV+VPLG PKE+ + EG LL+NEYIVYNV+QIRMRY+IQV F Y Sbjct: 387 YMKNTHAKTHSSYAVDIVQVFRASRNGETERFQKFSDMSNRMLLWHGSRLTNWAGILSQGLRIAPPEAPSTGYMFGKGVYFADMFSESAIYCYASSAAKNGVLLLCEVALGDMNELLSANSDADKLPSGKLSTKAVGATAPDFKEAQILEDGVIVPLGNPKERPKHEGILLHNEYIVYNVEQIRMRYVIQVEFNY 581
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_ARATH (Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.353e-100 Identity = 144/195 (73.85%), Postives = 169/195 (86.67%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THS YTV++ Q+F+ +R E++RF++FS +KNRMLLWHGSRLTNW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY N+ GVLLLCEVALGDM ELL + +AD LP GKLSTKGVG TAP+PSEAQ+L+DGVVVPLGKP E++ +G LLYNEYIVYNV+QI+MRY+IQV F Y Sbjct: 441 YMENTHAKTHSGYTVEIAQLFRASRAVEADRFQQFSSSKNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGDMNELLYSDYNADNLPPGKLSTKGVGKTAPNPSEAQTLEDGVVVPLGKPVERSCSKGMLLYNEYIVYNVEQIKMRYVIQVKFNY 635
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_MAIZE (Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 3.079e-100 Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKL +KGVG TAP+ E++ DDGVVVPLG+PK++ ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 456 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLRSKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 652
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PRP2A_ORYSJ (Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica GN=PARP2-A PE=3 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 9.900e-100 Identity = 145/197 (73.60%), Postives = 167/197 (84.77%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTH +TH++YTVDVVQIFKV+R GE ERF+KF+ NRMLLWHGSRLTNW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALG+M ELL A DA+ LP GKLSTKGVG T P+ +E++ DDGVVVPLGKPK E ++ G+LLYNE+IVYNVDQIRMRY++ VSF + K Sbjct: 463 YLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGEMNELLNADYDANNLPKGKLSTKGVGQTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYNVDQIRMRYVLHVSFNFKK 659
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PRP2B_ORYSJ (Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica GN=PARP2-B PE=3 SV=2) HSP 1 Score: 294.278 bits (752), Expect = 1.669e-93 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTH +TH+ YTVD+VQIFKV+R GE ERF+KF+ NRMLLWHGSRLTNW GILSQGLRIAPPEAP +G+MFGKGVYFADMFSKSANYC + A +GV+LLCEVALG+M ELL AD LP+GKLSTKGVG T P+ +E++ DDG+V+PLGKP K +R G+L+YNEYIVYNVDQIRMRY++ V+F + + Sbjct: 407 YLTNTHGKTHTGYTVDIVQIFKVSRLGEMERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVYFADMFSKSANYCCASEACKSGVMLLCEVALGEMNELLYGDFGADNLPNGKLSTKGVGQTEPNIAESKITDDGMVIPLGKPEKVPSRRGSLMYNEYIVYNVDQIRMRYILNVNFNFKR 603
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_RAT (Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1 SV=4) HSP 1 Score: 238.039 bits (606), Expect = 3.144e-70 Identity = 117/196 (59.69%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G TAPDPS + +L DGV VPLG P N + LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 817 YVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTAPDPSASITL-DGVEVPLGTGIPSGVN-DTCLLYNEYIVYDIAQVNLKYLLKLKFNF 1009
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_XENLA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis GN=parp1 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.737e-70 Identity = 116/195 (59.49%), Postives = 145/195 (74.36%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V++IFK+ R+GE +R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ G++LL EVALG+M E L+A S KLP GK S KG+G TAPDPS L DGV VPLGK N + +LLYNEYIVY++ Q+ ++YL+++ F Y Sbjct: 800 YVKNTHADTHNAYDLEVLEIFKIDREGEYQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHAMPGSPIGLILLGEVALGNMHE-LKAASQITKLPKGKHSVKGLGRTAPDPSATVQL-DGVDVPLGKGTSANISDTSLLYNEYIVYDIAQVNLKYLLKLKFNY 992
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP_SARPE (Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.585e-70 Identity = 112/195 (57.44%), Postives = 146/195 (74.87%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+TH Y ++VV IFKV R GE+ R+K F NR LLWHGSRLTN+ GILS GL+IAPPEAP TGYMFGKG+YFADM SKSANYC T+ +TG++LL EVALGDM E AK KLP+ K S G G T P+PSE+ +DGV +PLGKP + + +LLYNE+I+Y++ Q+ ++Y+++++FKY Sbjct: 802 YVKNTHAETHKLYDLEVVDIFKVARQGEARRYKPFKKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGYMFGKGIYFADMVSKSANYCCTSHHNSTGLMLLSEVALGDMMECTAAKY-VTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIPLGKPITNDSLKSSLLYNEFIIYDIAQVNIQYMLRMNFKY 995
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_MOUSE (Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.872e-69 Identity = 115/196 (58.67%), Postives = 147/196 (75.00%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G+++L EVALG+M EL A S KLP GK S KG+G T PDPS + +L +GV VPLG P N + ALLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 816 YVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVN-DTALLYNEYIVYDIAQVNLKYLLKLKFNF 1008
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_HUMAN (Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4) HSP 1 Score: 233.802 bits (595), Expect = 9.936e-69 Identity = 114/195 (58.46%), Postives = 143/195 (73.33%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GE +R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G T PDPS SL DGV VPLG + +LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 817 YVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSANISL-DGVDVPLGTGISSGVNDTSLLYNEYIVYDIAQVNLKYLLKLKFNF 1009
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_CRIGR (Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2 SV=3) HSP 1 Score: 233.802 bits (595), Expect = 1.019e-68 Identity = 115/196 (58.67%), Postives = 146/196 (74.49%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGK--PKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++V+ IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL EVALG+M EL A S KLP GK S KG+G T PDPS + +L +GV VPLG P N + LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 816 YVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNMYELKHA-SHISKLPKGKHSVKGLGKTTPDPSASITL-EGVEVPLGTGIPSGVN-DTCLLYNEYIVYDIAQVNLKYLLKLKFNF 1008 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001582 ID=g.arboreum_cottongen_reftransV1_0001582; Name=g.arboreum_cottongen_reftransV1_0001582; organism=Gossypium arboreum; type=contig; length=786bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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