g.arboreum_cottongen_reftransV1_0001582, g.arboreum_cottongen_reftransV1_0001582 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001582
Unique Nameg.arboreum_cottongen_reftransV1_0001582
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length786
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr4chromosomeg.arboreum_cottongen_reftransV1_0001582:1..786 .
Chr4:27184837..27186631 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A068V8L3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_144 OS=Coffea canephora GN=GSCOC_T00005043001 PE=4 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.182e-104
Identity = 147/196 (75.00%), Postives = 175/196 (89.29%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y++NTHA+THS+Y+VD+VQIF+ +R+GESERFKKFS T NR+LLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY++S    GVLLLCEVALGDMAELL A  +ADKLP GKLSTKG+GATAPD SE+++L+DGV+VP G+PK+   + +LLYNEYIVYNV+QI+MRY++QV F Y +
Sbjct:  435 YMKNTHAKTHSSYSVDIVQIFRASREGESERFKKFSRTHNRLLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYSSSNAHAGVLLLCEVALGDMAELLHADYNADKLPQGKLSTKGIGATAPDSSESRTLEDGVIVPSGRPKQLGTKASLLYNEYIVYNVEQIKMRYVLQVKFNYRR 630          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7LGW7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 1.195e-104
Identity = 149/195 (76.41%), Postives = 176/195 (90.26%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y++NTHA+THSNYTVD+VQIF+ +R+GE+ERF+KF+ TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY       GVLLLCEVALG+MAELL AK DAD+LP+GKLSTKG+G TAPDPS+A+ L+DG+VVPLGKPK ++ ++G LLYNEYIVYNV+QIRMRY++ V+F +
Sbjct:  472 YMKNTHAETHSNYTVDIVQIFRTSREGEAERFRKFASTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYATRTAKDGVLLLCEVALGEMAELLTAKYDADQLPNGKLSTKGLGGTAPDPSKARELEDGLVVPLGKPKTKSGKKGHLLYNEYIVYNVEQIRMRYIVHVNFNF 666          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7VS39_MAIZE (Uncharacterized protein OS=Zea mays GN=ZEAMMB73_284458 PE=4 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 8.873e-104
Identity = 145/197 (73.60%), Postives = 169/197 (85.79%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A  +GVLLLCEVALGDM ELL A  DA+ LP GKLSTKGVG TAP+  E++  DDGVVVPLG+PK E ++ G LLYNEYIVYNVDQIRMRY++ V+F + +
Sbjct:   70 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 266          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: B4FCJ3_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.673e-103
Identity = 144/197 (73.10%), Postives = 170/197 (86.29%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A  +GVLLLCEVALGDM ELL A  DA+ LP GKLSTKGVG TAP+  E++  DDGVVVPLG+PK++ ++ G LLYNEYIVYNVDQIRMRY++ V+F + +
Sbjct:  137 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 333          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: M1CY69_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030070 PE=4 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 2.465e-102
Identity = 149/195 (76.41%), Postives = 170/195 (87.18%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNR-EGALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y++NTHA+THS+Y VD+VQ+F+ +R+GE+ERF+KFS   NRMLLWHGSRLTNW GILSQGLRIAPPEAP+TGYMFGKGVYFADMFS+SA YCY +SA   GVLLLCEVALGDM ELL A SDADKLP GKLSTK VGATAPD  EAQ L+DGV+VPLG PKE+ + EG LL+NEYIVYNV+QIRMRY+IQV F Y
Sbjct:  387 YMKNTHAKTHSSYAVDIVQVFRASRNGETERFQKFSDMSNRMLLWHGSRLTNWAGILSQGLRIAPPEAPSTGYMFGKGVYFADMFSESAIYCYASSAAKNGVLLLCEVALGDMNELLSANSDADKLPSGKLSTKAVGATAPDFKEAQILEDGVIVPLGNPKERPKHEGILLHNEYIVYNVEQIRMRYVIQVEFNY 581          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP_DROME (Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.522e-68
Identity = 111/196 (56.63%), Postives = 144/196 (73.47%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYT 586
            Y++NTHA TH +Y + +V +FKV+R GE+ RFK F    NR LLWHGSRLTN+ GILS GLRIAPPEAP TGYMFGKG+YFADM SKSANYC T+   +TG++LL EVALGDM E   AK   +KL + K S  G G T PDP+++    DGV +P G+   +++ + +LLYNEYIVY+V Q+ ++YL ++ FKY+
Sbjct:  799 YVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKY-INKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKYS 993          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_BOVIN (Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 4.471e-68
Identity = 112/195 (57.44%), Postives = 143/195 (73.33%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y++NTHA TH+ Y ++VV IFK+ R+GES+R+K F    NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+     G++LL E ALG+M EL  A+    KLP GK S KG+G T PDPS + ++ DGV VPLG        +  LLYNEYIVY++ Q+ ++YL+++ F +
Sbjct:  819 YVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAALGNMYELKHARH-ISKLPKGKHSVKGLGKTTPDPSASITV-DGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKFNF 1011          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_HUMAN (Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 2.648e-67
Identity = 113/198 (57.07%), Postives = 143/198 (72.22%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ---NREG-ALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y+Q+THA THS+YT+ ++ +F+V +DGE E F++     NRMLLWHGSR++NW GILS GLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ +    TG+LLL EVALG   ELL+A   A+ L  GK STKG+G  AP  +   +L +G  VPLG   +    N +G  L YNEYIVYN +Q+RMRYL++V F +
Sbjct:  385 YLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFRE--DLHNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTL-NGSTVPLGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKVQFNF 579          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_MOUSE (Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3)

HSP 1 Score: 221.09 bits (562), Expect = 4.765e-66
Identity = 110/198 (55.56%), Postives = 142/198 (71.72%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ---NREG-ALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y+Q+THA TH +YT+ ++ +F+V ++GE E F++     NRMLLWHGSRL+NW GILS GLR+APPEAP TGYMFGKG+YFADM SKSANYC+ +    TG+LLL EVALG   ELL+A   A  L  GK STKG+G  AP P+   +L +G  VPLG   +    N EG  L YNE+IVY+ +Q+RMRYL+++ F +
Sbjct:  361 YLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAFRE--DLPNRMLLWHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAQGLLRGKHSTKGMGKMAPSPAHFITL-NGSTVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKIQFNF 555          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_MAIZE (Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.131e-66
Identity = 109/198 (55.05%), Postives = 142/198 (71.72%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGT-KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y+ NTHA TH ++++++ ++F + RDGE  ++ ++     N+MLLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA YCY +     G++LL EVALGDM EL +A S  DK P GK STKG+G T P  SE     D VVVP GKP   + R   L+YNEYIVYN  Q++M++L++V F + +
Sbjct:  784 YLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIRSSELMYNEYIVYNTSQVKMQFLLKVRFHHKR 980          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ORYSJ (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica GN=PARP1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.033e-65
Identity = 109/198 (55.05%), Postives = 141/198 (71.21%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGT-KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y+ NTHA TH  +++++ ++F + RDGE  ++ ++     N+MLLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA YCY +     G++LL EVALGDM EL +A S  DK P GK STKG+G T P  SE     D VVVP GKP   + +   L+YNEYIVYN  Q++M+YL++V F + +
Sbjct:  781 YLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHKR 977          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_CHICK (Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 4.406e-65
Identity = 117/195 (60.00%), Postives = 145/195 (74.36%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583
            Y++NTHA TH+ Y + VV+IF++ R+GES+R+K F    NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ A   G++LL EVALG+M EL  A S   KLP GK S KG+G TAPDP+   +L DGV VPLG        +  LLYNEYIVY+V Q+ ++YL+++ F Y
Sbjct:  814 YVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGNMYELKNA-SHITKLPKGKHSVKGLGKTAPDPTATTTL-DGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNY 1006          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ARATH (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 2.149e-60
Identity = 103/201 (51.24%), Postives = 141/201 (70.15%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTK----NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589
            Y+  THA TH+ +++++ ++F + R+GE   F K++  +    N+MLLWHGSRLTN+ GIL+QGLRIAPPEAPATGYMFGKG+YFAD+ SKSA YCYT      G++LL EVALG++ EL +AK   DK P GK STKG+G   P  SE       V VP GKP   + +   L+YNEYIVY+  Q+++++L++V FK+ +
Sbjct:  787 YLNTTHAPTHTEWSLELEEVFALEREGE---FDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLSEVALGEIHELTKAKY-MDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHKR 983          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PME1_CAEEL (Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans GN=pme-1 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.222e-51
Identity = 99/204 (48.53%), Postives = 136/204 (66.67%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADK-LPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-----KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK*L 595
            Y++NTH  TH +  V+++ I K+ RD ES +FK+  G  NR LLWHGS   N+ GIL QGLRIAPPEAP +GYMFGKGVYFADMFSKS  YC  N A     LLLC+VALG++ +L+ +K+ + + LP G  S +G+G   P    + +  DG  +PLG        +Q+ +  LLYNE+IVY+VDQI+++YL++V   + + L
Sbjct:  746 YLKNTHGATH-DLKVELIDILKLNRDNESSKFKRHIG--NRRLLWHGSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVYFADMFSKSFFYCRAN-AKEEAYLLLCDVALGNVQQLMASKNVSRQTLPAGFQSVQGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDYHLLYNEFIVYDVDQIQLKYLVRVKMHHARHL 945          
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ONCMA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou GN=parp1 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.767e-31
Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 2
Query:    2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGK 232
            Y++NTHA TH+ YT+ V +IFK+ R+GE ++++ F    NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGK
Sbjct:   59 YVKNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK 135          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068V8L3_COFCA1.182e-10475.00Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
K7LGW7_SOYBN1.195e-10476.41Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7VS39_MAIZE8.873e-10473.60Uncharacterized protein OS=Zea mays GN=ZEAMMB73_28... [more]
B4FCJ3_MAIZE2.673e-10373.10Uncharacterized protein OS=Zea mays PE=2 SV=1[more]
M1CY69_SOLTU2.465e-10276.41Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PARP_DROME1.522e-6856.63Poly [ADP-ribose] polymerase OS=Drosophila melanog... [more]
PARP1_BOVIN4.471e-6857.44Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PA... [more]
PARP2_HUMAN2.648e-6757.07Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=... [more]
PARP2_MOUSE4.765e-6655.56Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=... [more]
PARP1_MAIZE7.131e-6655.05Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP... [more]
PARP1_ORYSJ1.033e-6555.05Poly [ADP-ribose] polymerase 1 OS=Oryza sativa sub... [more]
PARP1_CHICK4.406e-6560.00Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN... [more]
PARP1_ARATH2.149e-6051.24Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thal... [more]
PME1_CAEEL1.222e-5148.53Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditi... [more]
PARP1_ONCMA1.767e-3164.94Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncor... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPFAMPF00644PARPcoord: 1..151
e-value: 9.5E-58
score: 195.1
IPR012317Poly(ADP-ribose) polymerase, catalytic domainGENE3D3.90.228.10coord: 1..152
e-value: 3.8E-65
score: 219.0
IPR012317Poly(ADP-ribose) polymerase, catalytic domainPROSITEPS51059PARP_CATALYTICcoord: 1..155
score: 77.553
NoneNo IPR availablePANTHERPTHR10459DNA LIGASEcoord: 6..152
NoneNo IPR availablePANTHERPTHR10459:SF59SUBFAMILY NOT NAMEDcoord: 6..152
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 1..153

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001582 ID=g.arboreum_cottongen_reftransV1_0001582; Name=g.arboreum_cottongen_reftransV1_0001582; organism=Gossypium arboreum; type=contig; length=786bp
GTATATTCAGAATACTCATGCTCAGACACATTCAAATTATACAGTTGATG
TTGTTCAAATATTCAAGGTGACAAGAGACGGTGAAAGTGAACGCTTTAAA
AAGTTTTCTGGAACAAAAAATAGAATGCTGTTGTGGCATGGTTCTCGGCT
TACTAACTGGACTGGCATTCTGTCCCAAGGTTTGCGCATTGCTCCACCTG
AAGCGCCTGCCACGGGTTATATGTTTGGGAAGGGGGTTTACTTTGCTGAT
ATGTTCTCCAAAAGTGCAAATTATTGCTATACTAATTCTGCCTTCACAAC
TGGGGTGTTGCTTCTATGTGAGGTTGCCCTGGGTGACATGGCTGAGCTTC
TACAAGCTAAAAGCGATGCTGATAAGCTGCCGGATGGGAAGTTGAGCACA
AAAGGTGTTGGTGCAACTGCACCGGATCCTTCTGAAGCCCAGTCACTTGA
TGATGGTGTTGTAGTTCCCCTAGGAAAACCGAAGGAGCAAAACCGGGAGG
GTGCTTTATTATACAATGAATATATAGTCTACAATGTCGACCAGATAAGG
ATGCGCTACTTGATTCAAGTTAGTTTCAAATATACAAAGTAGTTGTCCGC
ACATTTGTTGATTTACTGCCTGGTTTTGATAGAATTTTGATCTGTAATCT
ATATGTTGTAAATGTATGAAACATATTTGCATTTGCTCTGTAGCCCGTGT
ATGATACCAGGCAGGGGACTTGTTTCATACGTTTTAGACAAAATGAACCC
CATTCCTTTTTCTTCTCTGAAATTCGAAATCCTATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR012317Poly(ADP-ribose)pol_cat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003950NAD+ ADP-ribosyltransferase activity