g.arboreum_cottongen_reftransV1_0001582, g.arboreum_cottongen_reftransV1_0001582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: A0A068V8L3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_144 OS=Coffea canephora GN=GSCOC_T00005043001 PE=4 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.182e-104 Identity = 147/196 (75.00%), Postives = 175/196 (89.29%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTHA+THS+Y+VD+VQIF+ +R+GESERFKKFS T NR+LLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY++S GVLLLCEVALGDMAELL A +ADKLP GKLSTKG+GATAPD SE+++L+DGV+VP G+PK+ + +LLYNEYIVYNV+QI+MRY++QV F Y + Sbjct: 435 YMKNTHAKTHSSYSVDIVQIFRASREGESERFKKFSRTHNRLLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYSSSNAHAGVLLLCEVALGDMAELLHADYNADKLPQGKLSTKGIGATAPDSSESRTLEDGVIVPSGRPKQLGTKASLLYNEYIVYNVEQIKMRYVLQVKFNYRR 630
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7LGW7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 1.195e-104 Identity = 149/195 (76.41%), Postives = 176/195 (90.26%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THSNYTVD+VQIF+ +R+GE+ERF+KF+ TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY GVLLLCEVALG+MAELL AK DAD+LP+GKLSTKG+G TAPDPS+A+ L+DG+VVPLGKPK ++ ++G LLYNEYIVYNV+QIRMRY++ V+F + Sbjct: 472 YMKNTHAETHSNYTVDIVQIFRTSREGEAERFRKFASTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYATRTAKDGVLLLCEVALGEMAELLTAKYDADQLPNGKLSTKGLGGTAPDPSKARELEDGLVVPLGKPKTKSGKKGHLLYNEYIVYNVEQIRMRYIVHVNFNF 666
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: K7VS39_MAIZE (Uncharacterized protein OS=Zea mays GN=ZEAMMB73_284458 PE=4 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 8.873e-104 Identity = 145/197 (73.60%), Postives = 169/197 (85.79%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPK-EQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKLSTKGVG TAP+ E++ DDGVVVPLG+PK E ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 70 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 266
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: B4FCJ3_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 2.673e-103 Identity = 144/197 (73.10%), Postives = 170/197 (86.29%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ-NREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y++NTH +THS YTVD+VQIFKV+R GE+ERF+KF+ T+NRMLLWHGSRL+NW GILSQGLRIAPPEAP TGYMFGKGVYFADMFSKSANYCY + A +GVLLLCEVALGDM ELL A DA+ LP GKLSTKGVG TAP+ E++ DDGVVVPLG+PK++ ++ G LLYNEYIVYNVDQIRMRY++ V+F + + Sbjct: 137 YLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDMNELLNADYDANNLPKGKLSTKGVGQTAPNMVESKVADDGVVVPLGEPKQEPSKRGGLLYNEYIVYNVDQIRMRYVLHVNFNFKR 333
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Match: M1CY69_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402030070 PE=4 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 2.465e-102 Identity = 149/195 (76.41%), Postives = 170/195 (87.18%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQNR-EGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA+THS+Y VD+VQ+F+ +R+GE+ERF+KFS NRMLLWHGSRLTNW GILSQGLRIAPPEAP+TGYMFGKGVYFADMFS+SA YCY +SA GVLLLCEVALGDM ELL A SDADKLP GKLSTK VGATAPD EAQ L+DGV+VPLG PKE+ + EG LL+NEYIVYNV+QIRMRY+IQV F Y Sbjct: 387 YMKNTHAKTHSSYAVDIVQVFRASRNGETERFQKFSDMSNRMLLWHGSRLTNWAGILSQGLRIAPPEAPSTGYMFGKGVYFADMFSESAIYCYASSAAKNGVLLLCEVALGDMNELLSANSDADKLPSGKLSTKAVGATAPDFKEAQILEDGVIVPLGNPKERPKHEGILLHNEYIVYNVEQIRMRYVIQVEFNY 581
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP_DROME (Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.522e-68 Identity = 111/196 (56.63%), Postives = 144/196 (73.47%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYT 586 Y++NTHA TH +Y + +V +FKV+R GE+ RFK F NR LLWHGSRLTN+ GILS GLRIAPPEAP TGYMFGKG+YFADM SKSANYC T+ +TG++LL EVALGDM E AK +KL + K S G G T PDP+++ DGV +P G+ +++ + +LLYNEYIVY+V Q+ ++YL ++ FKY+ Sbjct: 799 YVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHGLRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGDMMECTSAKY-INKLSNNKHSCFGRGRTMPDPTKSYIRSDGVEIPYGETITDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFKYS 993
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_BOVIN (Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 4.471e-68 Identity = 112/195 (57.44%), Postives = 143/195 (73.33%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y ++VV IFK+ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ G++LL E ALG+M EL A+ KLP GK S KG+G T PDPS + ++ DGV VPLG + LLYNEYIVY++ Q+ ++YL+++ F + Sbjct: 819 YVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAALGNMYELKHARH-ISKLPKGKHSVKGLGKTTPDPSASITV-DGVEVPLGTGISSGVNDTCLLYNEYIVYDIAQVHLKYLLKLKFNF 1011
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_HUMAN (Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.648e-67 Identity = 113/198 (57.07%), Postives = 143/198 (72.22%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ---NREG-ALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y+Q+THA THS+YT+ ++ +F+V +DGE E F++ NRMLLWHGSR++NW GILS GLRIAPPEAP TGYMFGKG+YFADM SKSANYC+ + TG+LLL EVALG ELL+A A+ L GK STKG+G AP + +L +G VPLG + N +G L YNEYIVYN +Q+RMRYL++V F + Sbjct: 385 YLQSTHAPTHSDYTMTLLDLFEVEKDGEKEAFRE--DLHNRMLLWHGSRMSNWVGILSHGLRIAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAEGLLQGKHSTKGLGKMAPSSAHFVTL-NGSTVPLGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKVQFNF 579
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP2_MOUSE (Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3) HSP 1 Score: 221.09 bits (562), Expect = 4.765e-66 Identity = 110/198 (55.56%), Postives = 142/198 (71.72%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQ---NREG-ALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y+Q+THA TH +YT+ ++ +F+V ++GE E F++ NRMLLWHGSRL+NW GILS GLR+APPEAP TGYMFGKG+YFADM SKSANYC+ + TG+LLL EVALG ELL+A A L GK STKG+G AP P+ +L +G VPLG + N EG L YNE+IVY+ +Q+RMRYL+++ F + Sbjct: 361 YLQSTHAPTHKDYTMTLLDVFEVEKEGEKEAFRE--DLPNRMLLWHGSRLSNWVGILSHGLRVAPPEAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQCNELLEANPKAQGLLRGKHSTKGMGKMAPSPAHFITL-NGSTVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKIQFNF 555
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_MAIZE (Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 7.131e-66 Identity = 109/198 (55.05%), Postives = 142/198 (71.72%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGT-KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTHA TH ++++++ ++F + RDGE ++ ++ N+MLLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA YCY + G++LL EVALGDM EL +A S DK P GK STKG+G T P SE D VVVP GKP + R L+YNEYIVYN Q++M++L++V F + + Sbjct: 784 YLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTVPLESEFVKWRDDVVVPCGKPVPSSIRSSELMYNEYIVYNTSQVKMQFLLKVRFHHKR 980
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ORYSJ (Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica GN=PARP1 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.033e-65 Identity = 109/198 (55.05%), Postives = 141/198 (71.21%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGT-KNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ NTHA TH +++++ ++F + RDGE ++ ++ N+MLLWHGSRLTN+ GILSQGLRIAPPEAP TGYMFGKG+YFAD+ SKSA YCY + G++LL EVALGDM EL +A S DK P GK STKG+G T P SE D VVVP GKP + + L+YNEYIVYN Q++M+YL++V F + + Sbjct: 781 YLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILSQGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLSEVALGDMYELKKATS-MDKPPRGKHSTKGLGKTVPLESEFAKWRDDVVVPCGKPVPASIKTSELMYNEYIVYNTSQVKMQYLLKVRFHHKR 977
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_CHICK (Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 4.406e-65 Identity = 117/195 (60.00%), Postives = 145/195 (74.36%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKPKEQN-REGALLYNEYIVYNVDQIRMRYLIQVSFKY 583 Y++NTHA TH+ Y + VV+IF++ R+GES+R+K F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGKG+YFADM SKSANYC+T+ A G++LL EVALG+M EL A S KLP GK S KG+G TAPDP+ +L DGV VPLG + LLYNEYIVY+V Q+ ++YL+++ F Y Sbjct: 814 YVKNTHAATHNAYDLKVVEIFRIEREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQADPIGLILLGEVALGNMYELKNA-SHITKLPKGKHSVKGLGKTAPDPTATTTL-DGVEVPLGNGISTGINDTCLLYNEYIVYDVAQVNLKYLLKLKFNY 1006
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ARATH (Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1 PE=1 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 2.149e-60 Identity = 103/201 (51.24%), Postives = 141/201 (70.15%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTK----NRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADKLPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK 589 Y+ THA TH+ +++++ ++F + R+GE F K++ + N+MLLWHGSRLTN+ GIL+QGLRIAPPEAPATGYMFGKG+YFAD+ SKSA YCYT G++LL EVALG++ EL +AK DK P GK STKG+G P SE V VP GKP + + L+YNEYIVY+ Q+++++L++V FK+ + Sbjct: 787 YLNTTHAPTHTEWSLELEEVFALEREGE---FDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLSEVALGEIHELTKAKY-MDKPPRGKHSTKGLGKKVPQDSEFAKWRGDVTVPCGKPVSSKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHKR 983
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PME1_CAEEL (Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans GN=pme-1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.222e-51 Identity = 99/204 (48.53%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGKGVYFADMFSKSANYCYTNSAFTTGVLLLCEVALGDMAELLQAKSDADK-LPDGKLSTKGVGATAPDPSEAQSLDDGVVVPLGKP-----KEQNREGALLYNEYIVYNVDQIRMRYLIQVSFKYTK*L 595 Y++NTH TH + V+++ I K+ RD ES +FK+ G NR LLWHGS N+ GIL QGLRIAPPEAP +GYMFGKGVYFADMFSKS YC N A LLLC+VALG++ +L+ +K+ + + LP G S +G+G P + + DG +PLG +Q+ + LLYNE+IVY+VDQI+++YL++V + + L Sbjct: 746 YLKNTHGATH-DLKVELIDILKLNRDNESSKFKRHIG--NRRLLWHGSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVYFADMFSKSFFYCRAN-AKEEAYLLLCDVALGNVQQLMASKNVSRQTLPAGFQSVQGLGRQCPREIGSYNHPDGYTIPLGLTYMQLQGKQDVDYHLLYNEFIVYDVDQIQLKYLVRVKMHHARHL 945
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Match: PARP1_ONCMA (Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou GN=parp1 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.767e-31 Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 2 Query: 2 YIQNTHAQTHSNYTVDVVQIFKVTRDGESERFKKFSGTKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPATGYMFGK 232 Y++NTHA TH+ YT+ V +IFK+ R+GE ++++ F NR LLWHGSR TN+ GILSQGLRIAPPEAP TGYMFGK Sbjct: 59 YVKNTHAATHNTYTLVVEEIFKIVREGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYMFGK 135 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001582 ID=g.arboreum_cottongen_reftransV1_0001582; Name=g.arboreum_cottongen_reftransV1_0001582; organism=Gossypium arboreum; type=contig; length=786bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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